LOPS Data Quality Report

Generated: 2026-03-02 11:39 EST | Data Source: JIRA | Tickets Analyzed: 5441

Active Checks

Check	Severity	Pass Rate	Violations / Applicable
Missing Story Points	CRITICAL	90.6%	262 / 2787
Missing Parent Ticket	WARNING	91.0%	338 / 3750
Missing Developer	CRITICAL	85.8%	682 / 4810
Missing QA Assignee	CRITICAL	98.5%	41 / 2787
Missing or Invalid Products	CRITICAL	17.6%	3995 / 4847
Missing TPM Assignee	WARNING	99.8%	9 / 4810
Missing or Invalid Fix Version	CRITICAL	2.1%	1691 / 1727
Missing or Wrong Team	CRITICAL	16.9%	4026 / 4847
Missing Code Reviewer	WARNING	71.4%	798 / 2787
In-Progress Without Sprint	CRITICAL	100.0%	0 / 4810

Report Guide

How to Read This Report

Summary tab: Overview of all checks with pass rates and a chart.

Per-check tabs: Each tab shows flagged tickets for one check, grouped by sprint.

Severity levels: CRITICAL = breaks reporting accuracy, WARNING = degrades report quality, INFO = nice to fix.

Scoring Method

Overall Score: Percentage of all check-field evaluations that passed.

Per-check Pass Rate: Percentage of applicable tickets that passed that specific check.

Applicability: Checks only apply to relevant issue types (e.g., QA Assignee does not apply to Tasks).

Data Source

project = LOPS AND Sprint is not EMPTY

Sprint Calendar

All sprints in reverse chronological order (most recent first) with their start and end dates from JIRA. Use this as a reference when analyzing sprint data.

Excluded Sprints

The following sprints are filtered from all metrics in this report:

39 sprints before Sprint 34 (legacy data)
23 sprints matching prefixes ["LOPS WH"]: LOPS WH 20250112 (60) (M14), LOPS WH 20250126 (61) (M15), LOPS WH 20250209 (62) (M16), LOPS WH 20250407 (40), LOPS WH 20250421 (41), LOPS WH 20250505 (42), LOPS WH 20250519 (43), LOPS WH 20250602 (44), LOPS WH 20250616 (45), LOPS WH 20250630 (46), LOPS WH 20250714 (47), LOPS WH 20250728 (48), LOPS WH 20250811 (49), LOPS WH 20250825 (50), LOPS WH 20250908 (51), LOPS WH 20250922 (52), LOPS WH 20251006 (53), LOPS WH 20251020 (54), LOPS WH 20251103 (55), LOPS WH 20251117 (56), LOPS WH 20251201 (57), LOPS WH 20251215 (58) (M12), LOPS WH 20251229 (59) (M13)

Sprint	Full Name	Start Date	End Date	Status
Sprint 63	LOPS-tfMRD-63-20260223	2026-02-23	2026-03-09	active
Sprint 62	LOPS-tfMRD-62-20260209	2026-02-09	2026-02-23	closed
Sprint 61	LOPS-tfMRD-61-20260126	2026-01-26	2026-02-09	closed
Sprint 60	LOPS-tfMRD-60-20260112	2026-01-12	2026-01-26	closed
Sprint 59	LOPS-tfMRD-59-20251229	2025-12-29	2026-01-12	closed
Sprint 58	LOPS-tfMRD-58-20251215	2025-12-15	2025-12-29	closed
Sprint 57	LOPS-tfMRD-57-20251202	2025-12-01	2025-12-15	closed
Sprint 56	LOPS-tfMRD-56-20251117	2025-11-17	2025-12-02	closed
Sprint 55	LOPS-tfMRD-55-20251103	2025-11-03	2025-11-17	closed
Sprint 54	LOPS-tfMRD-54-20251020	2025-10-21	2025-11-03	closed
Sprint 53	LOPS-tfMRD-53-20251006	2025-10-06	2025-10-20	closed
Sprint 52	LOPS-tfMRD-52-20250922	2025-09-22	2025-10-06	closed
Sprint 51	LOPS-tfMRD-51-20250908	2025-09-08	2025-09-22	closed
Sprint 50	LOPS-tfMRD-50-20250825	2025-08-26	2025-09-06	closed
Sprint 49	LOPS-tfMRD-49-20250811	2025-08-12	2025-08-25	closed
Sprint 48	LOPS-tfMRD-48-20250728	2025-07-29	2025-08-11	closed
Sprint 47	LOPS Sprint 20250714 (47)	2025-07-14	2025-07-26	closed
Sprint 47	LOPS-tfMRD-47-20250713	2025-07-15	2025-07-28	closed
Sprint 46	LOPS-tfMRD-46-20250630	2025-07-01	2025-07-14	closed
Sprint 46	LOPS Sprint 20250630 (46)	2025-06-30	2025-07-14	closed
Sprint 45	LOPS Sprint 20250616 (45)	2025-06-16	2025-06-30	closed
Sprint 44	LOPS Sprint 20250602 (44)	2025-06-02	2025-06-16	closed
Sprint 43	LOPS Sprint 20250519 (43)	2025-05-19	2025-06-02	closed
Sprint 42	LOPS Sprint 20250505 (42)	2025-05-05	2025-05-19	closed
Sprint 41	LOPS Sprint 20250421 (41)	2025-04-08	2025-05-05	closed
Sprint 40	LOPS Sprint 20250407 (40)	2025-04-07	2025-04-19	closed
Sprint 39	LOPS Sprint 20250324 (39)	2025-03-24	2025-04-07	closed
Sprint 38	LOPS Sprint 20250310 (38)	2025-03-10	2025-03-24	closed
Sprint 37	LOPS Sprint 20250224 (37)	2025-02-24	2025-03-07	closed
Sprint 36	LOPS Sprint 20250210 (36)	2025-02-10	2025-02-21	closed
Sprint 35	LOPS Sprint 20250127 (35)	2025-01-27	2025-02-07	closed
Sprint 34	LOPS Sprint 20250113 (34)	2025-01-13	2025-01-25	closed
sgNIPT Sprint 9 (25)	sgNIPT Sprint 9 (25)	2024-09-04	2024-09-21	closed
sgNIPT Sprint 8 (24)	sgNIPT Sprint 8 (24)	2024-08-23	2024-09-07	closed
sgNIPT Sprint 7 (23)	sgNIPT Sprint 7 (23)	2024-08-12	2024-08-24	closed
sgNIPT Sprint 6 (22)	sgNIPT Sprint 6 (22)	2024-07-29	2024-08-10	closed
sgNIPT Sprint 5 (21)	sgNIPT Sprint 5 (21)	2024-07-15	2024-07-27	closed
sgNIPT Sprint 4 (20)	sgNIPT Sprint 4 (20)	2024-07-01	2024-07-13	closed
sgNIPT Sprint 3 (19)	sgNIPT Sprint 3 (19)	2024-06-20	2024-06-28	closed
sgNIPT Sprint 2	sgNIPT Sprint 2	2024-06-04	2024-06-14	closed
sgNIPT Sprint 16 (32)	sgNIPT Sprint 16 (32)	2024-12-13	2024-12-28	closed
sgNIPT Sprint 15 (31)	sgNIPT Sprint 15 (31)	2024-12-02	2024-12-14	closed
sgNIPT Sprint 14 (30)	sgNIPT Sprint 14 (30)	2024-11-19	2024-11-30	closed
sgNIPT Sprint 13 (29)	sgNIPT Sprint 13 (29)	2024-11-04	2024-11-16	closed
sgNIPT Sprint 12 (28)	sgNIPT Sprint 12 (28)	2024-10-21	2024-11-04	closed
sgNIPT Sprint 11 (27)	sgNIPT Sprint 11 (27)	2024-10-07	2024-10-19	closed
sgNIPT Sprint 10 (26)	sgNIPT Sprint 10 (26)	2024-09-23	2024-10-05	closed
sgNIPT Sprint 1	sgNIPT Sprint 1	2024-05-20	2024-05-31	closed
WESonX Sprint 32	WESonX Sprint 32	2024-12-16	2024-12-28	closed
WESonX Sprint 31	WESonX Sprint 31	2024-12-02	2024-12-14	closed
WESonX Sprint 30	WESonX Sprint 30	2024-11-22	2024-11-30	closed
WESonX Sprint 29	WESonX Sprint 29	2024-11-04	2024-11-16	closed
WESonX Sprint 28	WESonX Sprint 28	2024-10-22	2024-11-02	closed
WESonX Sprint 27	WESonX Sprint 27	2024-10-14	2024-10-19	closed
WESonX Sprint 26	WESonX Sprint 26	2024-09-23	2024-10-05	closed
WESonX Sprint 25	WESonX Sprint 25	2024-09-09	2024-09-21	closed
WESonX Sprint 24	WESonX Sprint 24	2024-08-26	2024-09-07	closed
WESonX Sprint 23	WESonX Sprint 23	2024-08-12	2024-08-24	closed
WESonX Sprint 22	WESonX Sprint 22	2024-08-02	2024-08-10	closed
WESonX Sprint 21	WESonX Sprint 21	2024-07-22	2024-07-29	closed
WESonX Sprint 20	WESonX Sprint 20	2024-07-02	2024-07-15	closed
WESonX Sprint 19	WESonX Sprint 19	2024-06-17	2024-07-01	closed
WESonX Sprint 18	WESonX Sprint 18	2024-06-03	2024-06-17	closed
WESonX Sprint 17	WESonX Sprint 17	2024-05-20	2024-06-03	closed
WESonX Sprint 16	WESonX Sprint 16	2024-05-06	2024-05-20	closed
WESonX Sprint 15	WESonX Sprint 15	2024-04-24	2024-05-06	closed
WESonX Sprint - E2E	WESonX Sprint - E2E	—	—	future
WESonX - Post Launch	WESonX - Post Launch	—	—	future
WESonX - Launch	WESonX - Launch	—	—	future
RGT/EQMT 64 20260309	RGT/EQMT 64 20260309	2026-03-09	2026-03-23	future
Oncology 15-2024	Oncology 15-2024	2024-07-15	2024-07-29	closed
OSF M186	OSF M186	2023-05-24	2023-06-07	future
MiSeq Workflows	MiSeq Workflows	2026-01-15	2026-02-07	future
LV1 Sprint 235 (5/12-5/23)	LV1 Sprint 235 (5/12-5/23)	2025-05-12	2025-05-23	closed
LOPS WES/WGS 20260223 (63)	LOPS WES/WGS 20260223 (63)	2026-02-23	2026-03-09	active
LOPS WES/WGS 20260209 (62)	LOPS WES/WGS 20260209 (62)	2026-02-09	2026-02-23	closed
LOPS WES/WGS 20260126 (61)	LOPS WES/WGS 20260126 (61)	2026-01-26	2026-02-09	closed
LOPS WES/WGS 20260112 (60)	LOPS WES/WGS 20260112 (60)	2026-01-12	2026-01-26	closed
LOPS WES/WGS 20251229 (59)	LOPS WES/WGS 20251229 (59)	2025-12-29	2026-01-10	closed
LOPS WES/WGS 20251215 (58)	LOPS WES/WGS 20251215 (58)	2025-12-15	2025-12-27	closed
LOPS WES/WGS 20251201 (57)	LOPS WES/WGS 20251201 (57)	2025-12-01	2025-12-13	closed
LOPS WES/WGS 20251117 (56)	LOPS WES/WGS 20251117 (56)	2025-11-17	2025-11-29	closed
LOPS WES/WGS 20251103 (55)	LOPS WES/WGS 20251103 (55)	2025-11-03	2025-11-15	closed
LOPS WES/WGS 20251020 (54)	LOPS WES/WGS 20251020 (54)	2025-10-20	2025-11-01	closed
LOPS WES/WGS 20251006 (53)	LOPS WES/WGS 20251006 (53)	2025-10-06	2025-10-18	closed
LOPS WES/WGS 20250922 (52)	LOPS WES/WGS 20250922 (52)	2025-09-22	2025-10-04	closed
LOPS WES/WGS 20250908 (51)	LOPS WES/WGS 20250908 (51)	2025-09-08	2025-09-20	closed
LOPS WES/WGS 20250825 (50)	LOPS WES/WGS 20250825 (50)	2025-08-25	2025-09-06	closed
LOPS WES/WGS 20250811 (49)	LOPS WES/WGS 20250811 (49)	2025-08-11	2025-08-23	closed
LOPS WES/WGS 20250728 (48)	LOPS WES/WGS 20250728 (48)	2025-07-28	2025-08-09	closed
LOPS Production Support Issues	LOPS Production Support Issues	—	—	future
LOPS HiHx Impl Sprint 1 M1	LOPS HiHx Impl Sprint 1 M1	2024-05-06	2024-05-17	closed
LOPS WH 20260601 (70) (M24)	LOPS WH 20260601 (70) (M24)	2026-06-01	2026-06-15	future
LOPS WH 20260518 (69) (M23)	LOPS WH 20260518 (69) (M23)	2026-05-18	2026-06-01	future
LOPS WH 20260504 (68) (M22)	LOPS WH 20260504 (68) (M22)	2026-05-04	2026-05-18	future
LOPS WH 20260420 (67) (M21)	LOPS WH 20260420 (67) (M21)	2026-04-20	2026-05-04	future
LOPS WH 20260406 (66) (M20)	LOPS WH 20260406 (66) (M20)	2026-04-06	2026-04-20	future
LOPS WH 20260323 (65) (M19)	LOPS WH 20260323 (65) (M19)	2026-03-23	2026-04-06	future
LOPS WH 20260309 (64) (M18)	LOPS WH 20260309 (64) (M18)	2026-03-09	2026-03-23	future
LOPS WH 20260223 (63) (M17)	LOPS WH 20260223 (63) (M17)	2026-02-23	2026-03-06	active
GHPv2	GHPv2	—	—	future
G64onLOPS Sprint 9 (24)	G64onLOPS Sprint 9 (24)	2024-08-26	2024-09-07	closed
G64onLOPS Sprint 8 (23)	G64onLOPS Sprint 8 (23)	2024-08-12	2024-08-24	closed
G64onLOPS Sprint 7 (22)	G64onLOPS Sprint 7 (22)	2024-07-30	2024-08-10	closed
G64onLOPS Sprint 6 (21)	G64onLOPS Sprint 6 (21)	2024-07-16	2024-07-27	closed
G64onLOPS Sprint 5 (20)	G64onLOPS Sprint 5 (20)	2024-07-08	2024-07-13	closed
G64onLOPS Sprint 4 (19)	G64onLOPS Sprint 4 (19)	2024-06-17	2024-06-28	closed
G64onLOPS Sprint 3 (18)	G64onLOPS Sprint 3 (18)	2024-06-03	2024-06-15	closed
G64onLOPS Sprint 2 (17)	G64onLOPS Sprint 2 (17)	2024-05-17	2024-06-01	closed
G64onLOPS Sprint 17 (32)	G64onLOPS Sprint 17 (32)	2024-12-16	2024-12-28	closed
G64onLOPS Sprint 16 (31)	G64onLOPS Sprint 16 (31)	2024-12-02	2024-12-14	closed
G64onLOPS Sprint 15 (30)	G64onLOPS Sprint 15 (30)	2024-11-18	2024-11-30	closed
G64onLOPS Sprint 14 (29)	G64onLOPS Sprint 14 (29)	2024-11-04	2024-11-16	closed
G64onLOPS Sprint 13 (28)	G64onLOPS Sprint 13 (28)	2024-10-21	2024-11-02	closed
G64onLOPS Sprint 12 (27)	G64onLOPS Sprint 12 (27)	2024-10-07	2024-10-19	closed
G64onLOPS Sprint 11 (26)	G64onLOPS Sprint 11 (26)	2024-09-23	2024-10-05	closed
G64onLOPS Sprint 10 (25)	G64onLOPS Sprint 10 (25)	2024-09-09	2024-09-21	closed

Total: 117 sprints shown

Pass Rates by Check

Pass rate for each data quality check across tickets in the selected sprint range. The dashed green line marks the 95% target threshold.

Score by Sprint

Quality score per sprint (higher is better). Only sprints with at least one violation are shown.

Missing Story Points

CRITICAL 90.6% pass rate (262 violations / 2787 applicable)

Dev and QA story points should both have values. 0 is valid; only null/empty is flagged.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10044	Story	Development Blocked	Valeria Vargas	[new scope] Manifest DTO and Conversion Service	dev_points: null, qa_points: null
LOPS-9758	Defect	Code Review	Valeria Vargas	Assay Cancellation request not being process in LOPS	dev_points: null, qa_points: null

LOPS-tfMRD-62-20260209 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9770	Defect	Closed	Hani Yakan	Error message during 'send to LOPS' returns wrong location	dev_points: null, qa_points: null

LOPS-tfMRD-61-20260126 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9789	Tweak	Closed	Hani Yakan	Remove well location from error message	dev_points: null, qa_points: null

LOPS-tfMRD-59-20251229 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9423	Defect	Closed	Hani Yakan	Unable to download hybridization worklist	dev_points: null, qa_points: null
LOPS-9321	Tweak	Closed	Hani Yakan	CLONE - Enhance error message during 'send to LOPS' failure to display all samples with exception status	dev_points: null, qa_points: null

LOPS-tfMRD-57-20251202 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9337	Defect	Closed	Klead Fusha	Allow users to send pipe manifest with Cancelled assays	dev_points: null, qa_points: null
LOPS-9262	Defect	Closed	Valeria Vargas	Sample Batching Identified bugs	dev_points: null, qa_points: null
LOPS-9034	Defect	Closed	Hani Yakan	User reports new pool showed up in tramstop	dev_points: null, qa_points: null

LOPS-tfMRD-56-20251117 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9112	Tweak	Closed	Valeria Vargas	Display Cancelled / TNP status	dev_points: null, qa_points: null
LOPS-8459	Tweak	Closed	Hani Yakan	Review and update error messages displayed when receiving a package fails	dev_points: null, qa_points: null

LOPS-tfMRD-55-20251103 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9160	Defect	Closed	Klead Fusha	Validate reagents request returns reagents.aliquot as container barcode	dev_points: null, qa_points: null
LOPS-8633	Tweak	Closed	Mikhail Terpugov	Toggle between patient sample flag and non-patient sample flag	dev_points: null, qa_points: null

LOPS-tfMRD-54-20251020 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8993	Defect	Closed	Valeria Vargas	Fix for Runlog Upload with TNP samples	dev_points: null, qa_points: null
LOPS-8825	Defect	Closed	Valeria Vargas	Verso worklist is not supported	dev_points: null, qa_points: null

LOPS-tfMRD-53-20251006 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8518	Tweak	Closed	Valeria Vargas	QC Batching (From Verso) should be created after info page	dev_points: null, qa_points: null

LOPS-tfMRD-51-20250908 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8438	Defect	Closed	Mikhail Terpugov	tfMRD - Plasma Isolation: Unreleasing and then releasing a dataset results in error	dev_points: null, qa_points: null
LOPS-8434	Defect	Verified	Kersha Eddy	Latitude -> Size Selection -> Quantification: add plate selector	dev_points: null, qa_points: null
LOPS-8417	Tweak	Closed	Klead Fusha	Update Hybrid Capture Selection Sorting	dev_points: null, qa_points: null
LOPS-8359	Defect	Closed	Klead Fusha	TNP'd Samples missing Group Test Method starting from Normalization	dev_points: null, qa_points: null
LOPS-8353	Tweak	Closed	Isaac Vargas	A Process type drop down is showing when downloading worklist on First bead addition	dev_points: null, qa_points: null
LOPS-7333	Defect	Closed	Klead Fusha	Control 2 (tfMRD_pc2) should have sample QC Criteria applied at hybrid capture selection	dev_points: null, qa_points: null

LOPS-tfMRD-50-20250825 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7767	Defect	Closed	—	Runfolder information missing in Assay QC page	dev_points: null, qa_points: null

LOPS-tfMRD-49-20250811 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8184	Defect	Closed	Klead Fusha	tfMRD UI - Pool Prep not queuing plates correctly	dev_points: null, qa_points: null
LOPS-7986	Tweak	Closed	Isaac Vargas	Remove not mandatory reagent from sequencing TM	qa_points: null

LOPS-tfMRD-48-20250728 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7833	Defect	Closed	—	tfMRD UI improvements - Fix crash in site menu	dev_points: null, qa_points: null

LOPS-tfMRD-47-20250713 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7576	Tweak	Closed	Ron Enson	tfMRD upgraded UI - add [Create Run Detail Group] to sequencing	qa_points: null

LOPS-tfMRD-46-20250630 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7279	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Instruments - Active	qa_points: null
LOPS-7276	Tweak	Closed	Ron Enson	tfMRD upgraded UI - Consumables + Tracers - Historical Conumable Lots	qa_points: null
LOPS-7267	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Plates - Historical	qa_points: null
LOPS-7266	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Plates - Search	qa_points: null

LOPS Sprint 20250630 (46) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7252	Defect	Closed	Ray Ward	Assay Request (ITT000002) Transactions Causing Errors - production update	dev_points: null, qa_points: null
LOPS-7234	Story	Verified	Ray Ward	Library QC performance improvements - code fix	qa_points: null
LOPS-7228	Defect	Closed	Ray Ward	Change Mode for ReworkCandidate on QCReviewDataset to resolve poor query performance (production fix)	qa_points: null

LOPS Sprint 20250616 (45) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7190	Defect	Closed	Klead Fusha	tfMRD: Library Amplification Quant Review plate with 22 passed samples fails QC	dev_points: null, qa_points: null
LOPS-7185	Defect	Closed	Dennis Lin	Assay QC for SEQ plate with failed Sample-level post-sequencing QC and failed Run-level post-sequencing QC display empty	dev_points: null, qa_points: null

LOPS Sprint 20250602 (44) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7064	Defect	Closed	Ray Ward	pipelaunchid column set to "Do Not Retrieve" (production fix)	qa_points: null
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	dev_points: null, qa_points: null
LOPS-5752	Story	Closed	Mikhail Terpugov	Sample Queue Displayed Info	dev_points: null, qa_points: null

LOPS Sprint 20250519 (43) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6670	Defect	Verified	Ray Ward	Extraction/Library QC Review: Page Loading Timeout for 'Accept Partial' Action	qa_points: null

LOPS Sprint 20250505 (42) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6863	Defect	Closed	Klead Fusha	Manual Data Entry doesn't work after Lib Amp Quant QC Review - "Reject" button	dev_points: null, qa_points: null
LOPS-6734	Defect	Verified	Klead Fusha	Failed to process action 'GenerateWorklistAction'. tfMRD Methylation Deamination Purif	dev_points: null, qa_points: null
LOPS-6609	Story	Verified	Swati Giri	WES/WGS: Tissue DNA Extraction: Record Water Reagent	qa_points: null
LOPS-6250	Defect	Closed	Ariel Jirau	Date time fields for lops packages in the S3 buckets does not match what is expected	qa_points: null

LOPS Sprint 20250421 (41) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6492	Story	Closed	Klead Fusha	tfMRD LibPrep QC Review - ReQuant	dev_points: null, qa_points: null
LOPS-6385	Defect	Verified	Leonid Garin	Address WGS Regression in PromoteResultsToSourceArray - results are released in action and should be controlled by calle	dev_points: null, qa_points: null
LOPS-5983	Story	Verified	Kevin Detweiler	Plate List Page > WES Actions: Support Tasks for Plates in the WES Workflow (Test Only)	dev_points: null, qa_points: null

LOPS Sprint 20250407 (40) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6097	Story	Opened	—	Method for automatically transitioning QC batches from "Completed" to "Reviewed" based on TBD criteria	dev_points: null, qa_points: null
LOPS-5921	Defect	Verified	Meghana Joshi	WGS/WES Upload Library Prep Rundata - Required String 'ApplyArrayMethod' is null or empty.	dev_points: null, qa_points: null
LOPS-5907	Story	Verified	Dennis Lin	WES: Plate List Page > Update 'Create Run Details'	dev_points: null, qa_points: null
LOPS-5905	Story	In Grooming	Dennis Lin	WES: QC Batch List Page > WES Actions: Validate Task per Workflow Step for QC Batch	dev_points: null, qa_points: null
LOPS-5793	Story	Closed	Isaac Vargas	Update Params - Normalization	dev_points: null, qa_points: null
LOPS-5727	Story	Closed	Ron Enson	Update Params - Lib Prep	dev_points: null, qa_points: null
LOPS-5511	Defect	Ready for SQA	Brandon Culver	Fix queries for tfMRD Post Capture Processing	dev_points: null, qa_points: null
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	dev_points: null, qa_points: null
LOPS-1818	Defect	Opened	Abdul Aziz	Wes On X: Tissue DNA Extraction: Run Details - List reagents vertically	dev_points: null, qa_points: null

LOPS Sprint 20250324 (39) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6216	Story	Verified	Olawale Dada	Update PacBio Sequencing Plate reagent to include fields to track Serial number, lot number and expiry	qa_points: null
LOPS-6066	Defect	Closed	—	Runlog processing is not recorded in SDI Group	dev_points: null, qa_points: null
LOPS-6002	Defect	Closed	Monish Grover	gDNA Pre-extraction runlog can only be uploaded for samples, not for NTC	dev_points: null, qa_points: null
LOPS-5949	Defect	Verified	Kevin Detweiler	Address Error when generating 'Extraction QC Report' and 'Library QC Report'	dev_points: null, qa_points: null
LOPS-5605	Story	Verified	Kevin Detweiler	Assay Details Page: Add a 'Workitem Description' column next to 'Workitem ID'	qa_points: null

LOPS Sprint 20250310 (38) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6100	Story	Verified	Monish Grover	Add Approval Types to sgNIPT Quant Steps	dev_points: null, qa_points: null
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	dev_points: null, qa_points: null
LOPS-5993	Tweak	Closed	—	Update Threshold for G64 Sequencing Run Metric	dev_points: null, qa_points: null
LOPS-5946	Defect	Closed	Bryan Jensen	LOPS doesn't display G64 sample and assay if sample was converted from X16 and was routed to Ashion/Psnl (env with OOnSS	dev_points: null, qa_points: null
LOPS-5935	Story	Verified	Kevin Detweiler	GHP: Update Assay Template Description	dev_points: null, qa_points: null
LOPS-5910	Story	Verified	Krishna Tanuku	Create a new run detail group for sgNIPt cfDNA PostLig Pur manual step	qa_points: null
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	dev_points: null, qa_points: null
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	dev_points: null, qa_points: null

LOPS Sprint 20250224 (37) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	dev_points: null, qa_points: null
LOPS-5985	Tweak	Verified	Brandon Culver	Update gDNA Ext quant plate suffix check to -LREXT	dev_points: null, qa_points: null
LOPS-5765	Defect	Closed	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method cannot be performed	dev_points: null, qa_points: null
LOPS-5709	Defect	Verified	Ray Ward	Complete? param missing from sgNIPT cfDNA Hybrid and Capture array methods	qa_points: null
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	dev_points: null, qa_points: null
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	qa_points: null

LOPS Sprint 20250210 (36) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5787	Defect	Verified	Olawale Dada	CFTR Primer Plate 1 is missing Well Positions	dev_points: null, qa_points: null
LOPS-5710	Defect	Verified	Monish Grover	Assay-41 is not completed automatically when all workitems are completed.	dev_points: null, qa_points: null
LOPS-5672	Defect	Verified	Monish Grover	Worklist cannot be generated and downloaded for Plasma Isolation samples.	dev_points: null, qa_points: null
LOPS-5442	Defect	Verified	Michael Livingston	Plate calculations for gDNA Extraction quant are incorrect	qa_points: null

LOPS Sprint 20250127 (35) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5582	Defect	Closed	Krishna Tanuku	Worklist generation is not supported for the Array Method: AM - sgNIPT cfDNA PostLig Purification - 1	dev_points: null, qa_points: null
LOPS-5444	Defect	Closed	Ize Imai	Errors when generating End Repair worklists	dev_points: null, qa_points: null
LOPS-5379	Tweak	Verified	Vasiliy Kumaev	Rack to plate transfer for cfDNA LibPrep End Repair runlog parsing	qa_points: null
LOPS-5283	Defect	Closed	—	Primer Design assay request message is not being processed successfully	dev_points: null, qa_points: null

LOPS Sprint 20250113 (34) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5439	Defect	Closed	Brad Garrett	WGS Download consolidation worklist triggers an error	dev_points: null, qa_points: null
LOPS-5129	Tweak	Verified	Sri Gorantla	Plate List Page: Group/Order WES Menus	dev_points: null, qa_points: null
LOPS-5110	Defect	Verified	Lev Evstratov	Error Message when selecting 'Grid with Params for Reagent IQC' view in Data Entry grid	dev_points: null, qa_points: null

sgNIPT Sprint 9 (25) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2653	Story	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (24)	qa_points: null

sgNIPT Sprint 3 (19) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2626	Story	Closed	—	Child gDNA sample template	dev_points: null, qa_points: null

sgNIPT Sprint 15 (31) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5027	Defect	Closed	—	Unable to promote results for sgNIPT cfDNA Library Prep A-Tailing array method	dev_points: null, qa_points: null

sgNIPT Sprint 13 (29) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4161	Defect	Verified	—	Transfer method sgNIPT cfDNA Capture to Pool Quant cannot be performed due to Level Zone naming conflict	dev_points: null, qa_points: null

WESonX Sprint 28 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4595	Defect	Closed	Kevin Detweiler	[SIG AU WES-X] Exception in LOPS did not generate TNP in LIMS	dev_points: null, qa_points: null

WESonX Sprint 26 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4110	Defect	Verified	Kevin Detweiler	"Not a Valid Instrument" error when user try to select an instrument in WESSequencingRunDetails	dev_points: null, qa_points: null

WESonX Sprint 25 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3873	Defect	Closed	Kevin Detweiler	Anomalous receive/unreceive/validation behavior in Histology	qa_points: null
LOPS-3854	Defect	Closed	Swati Giri	Save/Release doesn't complete the case	dev_points: null, qa_points: null

WESonX Sprint 24 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3640	Defect	Closed	—	LOPS worklist unable to be utilized by Biomek	dev_points: null, qa_points: null

WESonX Sprint 23 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3454	Defect	Verified	Mikhail Terpugov	Uploading for Capture PCRCleanup Rundata throws error	dev_points: null, qa_points: null

WESonX Sprint 22 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3269	Tweak	Closed	—	Missing Sonicators in assorted environments	dev_points: null, qa_points: null

WESonX Sprint 20 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3162	Defect	Closed	—	Incorrect sequencing barcodes for Positive Control	dev_points: null, qa_points: null
LOPS-3126	Defect	Closed	Matt Smith	LOPS can't process accessioning event from bridge	dev_points: null, qa_points: null

WESonX Sprint 18 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2741	Defect	Closed	Brad Garrett	Wes On X: BE Quant - Worklist can't be created	dev_points: null, qa_points: null
LOPS-2681	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - Step can't be completed with 'Blood pool not found for plate' error	dev_points: null, qa_points: null
LOPS-2483	Defect	Closed	Mikhail Terpugov	Wes On X: QC Review - Page doesn't display Array Level values when it's opened	dev_points: null, qa_points: null

WESonX Sprint 17 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2488	Defect	Verified	Klead Fusha	Wes On X: Error when creating worklists	dev_points: null, qa_points: null
LOPS-2391	Defect	Closed	Kevin Detweiler	Wes On X - Tissue Positive Control 1/2 QC statuses (Pass/Fail) doesn't shown in zone data at Extraction QC Review (SAMPL	dev_points: null, qa_points: null

WESonX Sprint 15 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2157	Defect	Closed	Meghana Joshi	Wes on X: Tissue Extraction: Tube to Rack - QC method name doesn't reflect the step name	dev_points: null, qa_points: null
LOPS-2144	Defect	Closed	Mikhail Terpugov	Wes On X - Blood Control QC and Blood NTC Control QC don't display in WLP2 QC review	dev_points: null, qa_points: null

WESonX - Post Launch (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2140	Defect	Closed	—	Wes on X: Tissue Extraction: Tube to Rack - Tissue Control Barcode is not fully visible for user to review	dev_points: null, qa_points: null

Oncology 15-2024 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6884	Story	Closed	Michael Livingston	Spike: Investigate issue with multiple genes for Assay 44	dev_points: null, qa_points: null
LOPS-6723	Defect	Verified	Brandon Culver	System must record values for controls	dev_points: null, qa_points: null

MiSeq Workflows (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9861	Story	Opened	Swati Giri	GHPv2- Miseq Pooling Upload Worklist	qa_points: null
LOPS-9738	Story	Ready for SQA	Kevin Detweiler	WGS Miseq Sequencing InProgress Page	dev_points: null, qa_points: null
LOPS-9515	Story	Ready for SQA	Swati Giri	Miseq Pooling Upload Worklist	qa_points: null

LOPS WES/WGS 20260223 (63) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10053	Story	Code Review	Swati Giri	UI Updates to QC Batch Maintenance Page	dev_points: null, qa_points: null
LOPS-9862	Story	Code Review	Swati Giri	MiSeq Pooling Download Worklist	qa_points: null
LOPS-9737	Story	In Progress	Kevin Detweiler	WGS Miseq Sequencing Prep Page	dev_points: null, qa_points: null
LOPS-9711	Defect	In SQA Review	Ray Ward	Unable to reject plates at Capture QC Review if they had multiple library quants	qa_points: null
LOPS-9636	Story	SQA Blocked	Ray Ward	Enable receiving TNPs from YALP	dev_points: null, qa_points: null
LOPS-9542	Story	In Progress	Ize Imai	System reads and saves all metrics from PIPE API framework for DAQ	dev_points: null, qa_points: null
LOPS-9439	Story	In Progress	Kevin Detweiler	MiSeq Qubit	dev_points: null, qa_points: null
LOPS-9236	Story	In Progress	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	dev_points: null, qa_points: null
LOPS-8330	Story	In Progress	Ray Ward	SPIKE: Library Prep: Bulk Retest page performance enhancements	dev_points: null, qa_points: null

LOPS WES/WGS 20260126 (61) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9497	Story	Verified	Dennis Lin	Add Pre-Amp and Post Amp menus to be part of Read-only access	dev_points: null, qa_points: null

LOPS WES/WGS 20260112 (60) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8389	Defect	Development Blocked	Ray Ward	Test methods remain active after assays are cancelled in LOPS	dev_points: null, qa_points: null

LOPS WES/WGS 20251103 (55) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9063	Defect	Verified	Monish Grover	PreAmp and PostAmp gizmo menus missing in the 1.4.0.2 release candidate	dev_points: null, qa_points: null

LOPS WES/WGS 20251020 (54) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	dev_points: null, qa_points: null

LOPS WES/WGS 20251006 (53) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8815	Story	Closed	Ize Imai	Enable BAM merge support for WGS tissue samples	dev_points: null, qa_points: null

LOPS WES/WGS 20250908 (51) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8394	Story	Verified	Monish Grover	Sequencing: Updates to Menu and Sidebar	dev_points: null, qa_points: null

LOPS WES/WGS 20250825 (50) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8378	Defect	Verified	—	Button name "Hybrid Capture Run Details"	dev_points: null, qa_points: null
LOPS-8355	Tweak	Closed	Ize Imai	Modify sgNIPT test to improve pipeline test passing	dev_points: null, qa_points: null

LOPS WES/WGS 20250811 (49) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8080	Tweak	Closed	Ize Imai	WES/WGS Update trackitem.u_containerbarcode column length	dev_points: null, qa_points: null
LOPS-7881	Tweak	Closed	Jesus Zazueta	WES/WGS - Sync master branch with lab instance master branches	dev_points: null, qa_points: null
LOPS-7867	Story	Verified	Kevin Detweiler	Histology: Display number of cases in sidebar under Tumor Tissue Dissection	dev_points: null, qa_points: null

LOPS WES/WGS 20250728 (48) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9623	Defect	Closed	Kevin Detweiler	CLONE - Wrong tramstop name on Extraction Menu landing page	dev_points: null, qa_points: null
LOPS-7880	Defect	Verified	—	Wrong 'Histo Sample Receipt' page name	dev_points: null, qa_points: null
LOPS-7878	Defect	Verified	Kevin Detweiler	Wrong tramstop name on Extraction Menu landing page	dev_points: null, qa_points: null
LOPS-7864	Defect	Closed	—	Fail & Re-Extract sample issue	dev_points: null, qa_points: null

LOPS Production Support Issues (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9791	Defect	In Grooming	—	Hide functionality to Add source sample to existing Assay as part of EPS Admin Role	dev_points: null, qa_points: null
LOPS-9766	Defect	Opened	—	Update transaction type ITT000013	dev_points: null, qa_points: null
LOPS-9751	Story	Opened	—	Implementation of a run-/batch-level “minimum patient samples passed” threshold for Assay QC	dev_points: null, qa_points: null
LOPS-9688	Defect	Opened	—	Assay attributes trim value or warning validation for extra spaces and new lines	dev_points: null, qa_points: null
LOPS-9532	Defect	Opened	—	LOPS showing "Overflow" as a value for concentration. Prevents uploading of Lib Quant Results File	dev_points: null, qa_points: null
LOPS-8515	Tweak	Opened	—	Allow Lab Managers or Supervisors to update Plate barcodes.	dev_points: null, qa_points: null
LOPS-8445	Defect	Closed	—	Prevent WES/WGS Primer Designs from being created if their associated Blood or Tissue Assay have a failed disposition	dev_points: null, qa_points: null
LOPS-8174	Story	Opened	—	Removal of the WES flowcell uniqueness check	dev_points: null, qa_points: null
LOPS-8173	Story	Opened	—	Stop storing unnecessary sequencing run fields in LOPS	dev_points: null, qa_points: null
LOPS-8172	Story	Opened	—	Removal of the flowcell instrument & side check	dev_points: null, qa_points: null
LOPS-8169	Story	Opened	—	Prevent duplicate SELECT samples from being registered in LOPS	dev_points: null, qa_points: null

LOPS WH 20260601 (70) (M24) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9365	Story	Opened	—	Update LRPCR Primer reagent container amounts and LRPCR Barcoding AM decrement amounts	dev_points: null, qa_points: null

LOPS WH 20260504 (68) (M22) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9859	Story	Opened	Michael Livingston	SPRQ work sprint 3	dev_points: null, qa_points: null
LOPS-8864	Story	In Grooming	Bob Ruff	Sidebar Development -Assay 44	dev_points: null, qa_points: null

LOPS WH 20260420 (67) (M21) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9858	Story	In Grooming	Michael Livingston	SPRQ work sprint 2	dev_points: null, qa_points: null

LOPS WH 20260406 (66) (M20) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9857	Story	In Grooming	Michael Livingston	SPRQ work sprint 1	dev_points: null, qa_points: null
LOPS-9047	Story	In Grooming	Bob Ruff	Improvement - avoid stuck analysis runs	dev_points: null, qa_points: null

LOPS WH 20260323 (65) (M19) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9629	Story	In Grooming	Michael Livingston	new entry point for Prof Samples	dev_points: null, qa_points: null
LOPS-9514	Story	In Progress	Michael Livingston	Deployment Strategy to Reduce or eliminate down time	dev_points: null, qa_points: null

LOPS WH 20260309 (64) (M18) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9646	Defect	In Grooming	Michael Livingston	Samples with failing specs should be skipped in QC Batch	dev_points: null, qa_points: null
LOPS-9320	Tweak	In Grooming	Michael Livingston	Disable user from generating cfDNA Hyb Day 1 worklist using "Download Worklist" button	dev_points: null, qa_points: null

LOPS WH 20260223 (63) (M17) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9921	Defect	Closed	Michael Livingston	Control Swap process shouldn't swap controls from plates when they are still in progress	dev_points: null, qa_points: null
LOPS-8339	Story	Ready for SQA	Mehmet Ali Eken	Implement dirty data resolving mechanism when getting sample data from LIMS	dev_points: null, qa_points: null
LOPS-8338	Story	Ready for SQA	Mehmet Ali Eken	Send notification to LIMS when sample is disposed/biobanked in LOPS	dev_points: null, qa_points: null
LOPS-8337	Story	Ready for SQA	Mehmet Ali Eken	Implement authentication logic to connect to LIMS API	dev_points: null, qa_points: null
LOPS-8336	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge sample disposal message processing	dev_points: null, qa_points: null
LOPS-8335	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge assay request message processing	dev_points: null, qa_points: null

GHPv2 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	dev_points: null, qa_points: null
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	dev_points: null, qa_points: null
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	dev_points: null, qa_points: null
LOPS-9541	Story	Opened	—	PD Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	dev_points: null, qa_points: null
LOPS-9540	Story	Opened	—	Convert LOPS->PD Pipeline Launch Message from Kafka to REST API	dev_points: null, qa_points: null
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	dev_points: null, qa_points: null

G64onLOPS Sprint 9 (24) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3277	Defect	Closed	Brad Garrett	WGS section in the Array List page contains various inconsistencies and misplaced buttons	dev_points: null, qa_points: null
LOPS-3265	Defect	Closed	Hani Yakan	References to WES in Quant 384WellPlate Blood	dev_points: null, qa_points: null

G64onLOPS Sprint 8 (23) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3411	Defect	Closed	Brad Garrett	QC Batch Data Entry throws an error	dev_points: null, qa_points: null

G64onLOPS Sprint 15 (30) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4948	Defect	Closed	—	The DestConcentration value has fewer digits after uploading rundata file	dev_points: null
LOPS-4931	Defect	Closed	Harris Shapiro	WES E2E workflow can not be completed on g64integration-01 environment	dev_points: null, qa_points: null
LOPS-4908	Defect	Closed	Brad Garrett	LOPS doesn't display metric results in Assay QC page if pipe.info.event contains metrics	dev_points: null, qa_points: null
LOPS-4899	Defect	Closed	Brad Garrett	LOPS marks the assay as 'Completed' with disposition = 'passed' instead of 'Failed' if the pipe info event contains DAQ	dev_points: null, qa_points: null
LOPS-4862	Defect	Closed	Default User	Box with empty barcode is not displayed in the box list	dev_points: null, qa_points: null
LOPS-4847	Defect	Closed	Brad Garrett	LOPS doesn't consume pipe status event if DAQ /PD job is completed	dev_points: null, qa_points: null

G64onLOPS Sprint 14 (29) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4698	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed.	dev_points: null, qa_points: null

G64onLOPS Sprint 11 (26) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3830	Defect	Verified	Hani Yakan	WGS G64 sample creation script error	qa_points: null

G64onLOPS Sprint 10 (25) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3827	Defect	Closed	Mikhail Terpugov	AssayStatus and Disposition are inaccurate	dev_points: null, qa_points: null

LOPS Sprint 32 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	dev_points: null, qa_points: null
LOPS-5081	Defect	Closed	—	Assay QC Failing	dev_points: null, qa_points: null

LOPS Sprint 28 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4752	Defect	Closed	—	2 Pipe Job ID and 2 Pipe Job Status records created after Pipeline Info message is received and processed successfully	dev_points: null, qa_points: null
LOPS-4559	Defect	Closed	Vladimir Piyanov	Primer Design ARM request was not processed with error	dev_points: null, qa_points: null
LOPS-4555	Defect	Closed	—	SEQ Manifest failing with ARJUNA016053 error	dev_points: null, qa_points: null
LOPS-4190	Defect	Closed	Kevin Detweiler	Primer design sequencing manifest is not generated	dev_points: null, qa_points: null

LOPS Sprint 27 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4120	Story	Verified	Ron Enson	Add 'Tracer' to the Reagent Class reftype	dev_points: null, qa_points: null
LOPS-4118	Story	Verified	Ron Enson	Add the button configured in LOPS-3513 to additional consumable list pages	dev_points: null, qa_points: null
LOPS-4017	Story	Closed	Ron Enson	Add u_commonname back to the instrument sdc	dev_points: null, qa_points: null

LOPS Sprint 26 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4009	Tweak	Closed	Alex Pakhunov	Reagent Sync: initial sync from LV1.0 to LOPS should only sync active reagents	dev_points: null, qa_points: null
LOPS-3883	Defect	Closed	Vladimir Piyanov	Messages under events.labops.workflow.status.v1 topic are not generated for sgNIPT e2e short TNP scenario.	qa_points: null

LOPS Sprint 23 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3492	Defect	Closed	Matt Smith	Missing post-pipeline Kafka messages	dev_points: null, qa_points: null

LOPS Sprint 24 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3223	Tweak	Closed	Vladimir Piyanov	Use OKTA authentication to call SamRep	dev_points: null, qa_points: null

LOPS Sprint 20 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3172	Defect	Verified	Lev Evstratov	Workitem status "Initial" does not change if assay was cancelled	dev_points: null, qa_points: null

LOPS Sprint 19 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2845	Defect	Closed	Valeria Vargas	Error accessing Jasper reports	dev_points: null, qa_points: null
LOPS-2817	Story	Verified	Vasiliy Kumaev	Fix issue with re-uploading quant rundata	qa_points: null

LOPS Sprint 18 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2639	Defect	Closed	Brandon Culver	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest: Single row expected instea	dev_points: null, qa_points: null
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	qa_points: null

LOPS Sprint 17 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2447	Defect	Verified	Vasiliy Kumaev	Pipe results are not auto-approved with all the passing metrics	dev_points: null, qa_points: null
LOPS-2413	Defect	Verified	Matt Smith	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest. Exception: java.lang.Index	dev_points: null, qa_points: null

LOPS Sprint 14 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2128	Defect	Verified	—	Pipe only seq manifest is not created: No Assay Template Workitems found	dev_points: null, qa_points: null
LOPS-1845	Defect	Verified	Brad Garrett	Extraction QC Review: parent sample doesn't have a hyperlink	dev_points: null, qa_points: null

LOPS Sprint 13 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1925	Defect	Closed	—	Assay Templates do not have a way to indicate if an assay template is for filler samples	dev_points: null, qa_points: null
LOPS-1777	Defect	Closed	Leonid Garin	Retest from an array Manage Tests page: No rows found.	dev_points: null, qa_points: null
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	dev_points: null, qa_points: null

LOPS Sprint 11 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1613	Defect	Ready for SQA	—	Fix errors in test methods	dev_points: null, qa_points: null
LOPS-1601	Story	Closed	Brad Garrett	Update to allow results to be promoted a 2nd time	dev_points: null, qa_points: null
LOPS-1590	Tweak	Closed	Klead Fusha	Add NAT-800316 to LOPS Repository	dev_points: null, qa_points: null

LOPS Sprint 12 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1611	Tweak	Opened	Meghana Joshi	We should not save run log headers in blood extraction array zone	dev_points: null, qa_points: null

LOPS Sprint 25 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1368	Tweak	Closed	—	Create a method for migrating Reagents lot data from LV1.0 to LOPS	dev_points: null

LOPS Sprint 08 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1183	Story	Closed	Michael Livingston	Update array methods with new parameter - RunDataEntered	dev_points: null, qa_points: null
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	dev_points: null, qa_points: null

LOPS Sprint 15 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	dev_points: null, qa_points: null
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	qa_points: null
LOPS-1025	Story	Closed	—	Gitlab Work	dev_points: null, qa_points: null

LOPS Sprint 06 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-899	Tweak	Closed	Brandon Culver	Spike - Create Design plan for refactoring sequencing run flow cell setup	dev_points: null, qa_points: null

LOPS Sprint 09 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	dev_points: null, qa_points: null
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	dev_points: null, qa_points: null

No Sprint Assigned (43 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9788	Defect	Verified	Michael Livingston	After Test Method is Canceled for the Sample the next Test Process is added automatically.	dev_points: null, qa_points: null
LOPS-9782	Defect	Closed	Michael Livingston	Sequencing Run is not completed for Assay43 and Assay44	dev_points: null, qa_points: null
LOPS-9481	Story	Verified	Brandon Culver	Cherrypick tfMRD Updates to Plasma Isolation Runlog Processing - Mislabeled Streck Barcode	dev_points: null, qa_points: null
LOPS-9325	Tweak	Closed	Michael Livingston	Update gDNA Extraction Quant QC Review to fail wells against "Plate-Level Sample QC" param	dev_points: null, qa_points: null
LOPS-9124	Defect	Verified	Lev Evstratov	Runlog service fails to process non UTF-8 encoded files	dev_points: null, qa_points: null
LOPS-9121	Defect	Verified	Brandon Culver	Fix available rework count logic in Hybrid Day 1 worklist cherry pick task	dev_points: null, qa_points: null
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	dev_points: null, qa_points: null
LOPS-9082	Tweak	Verified	Brandon Culver	Wrong worklist folder name - LRPCR LibPrep	dev_points: null, qa_points: null
LOPS-9016	Tweak	Verified	Brandon Culver	Capture Worklist - Update to generate Pool Number and DestWell from alternating wells on HYB Day 2 Plates	dev_points: null, qa_points: null
LOPS-9001	Story	Verified	Mehmet Ali Eken	Entry point for QIP	dev_points: null, qa_points: null
LOPS-8966	Story	Verified	Brandon Culver	Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	dev_points: null, qa_points: null
LOPS-8877	Defect	Verified	Michael Livingston	Normalization run data file fails in processing because contains failed samples	dev_points: null, qa_points: null
LOPS-8844	Story	Verified	Lev Evstratov	Instrument Integration Runlog processing	dev_points: null, qa_points: null
LOPS-8709	Defect	Verified	Brandon Culver	Resolve Assay Request message processing failure when Exception subfields are present	dev_points: null, qa_points: null
LOPS-8534	Story	Closed	Gianna Bell-Eunice	Reagent prep for e2e	dev_points: null, qa_points: null
LOPS-8200	Story	Verified	Michael Livingston	Automate Qubit File Import to Eliminate Manual Data Entry	dev_points: null, qa_points: null
LOPS-7983	Story	Closed	Mehmet Ali Eken	Create new functionality to accept the upload start sequencing message	dev_points: null, qa_points: null
LOPS-7889	Story	Closed	Brandon Culver	Update sgNIPT gDNA Normalization processor & policy for v1.0 Norm runlog	dev_points: null, qa_points: null
LOPS-7886	Story	Closed	Michael Livingston	Update CreateChildSample action to allow pooling of multiple plasma samples in the same assay	dev_points: null, qa_points: null
LOPS-7736	Defect	Closed	—	Creating reagents mix has error: Failed to adjust container amount. Check the use amount and units.	dev_points: null, qa_points: null
LOPS-7732	Tweak	Verified	Brandon Culver	Update 'sgNIPT gDNA Sequencing Run' plate suffix with "-PBSP"	dev_points: null, qa_points: null
LOPS-7697	Defect	Closed	Brandon Culver	LR-PCR Quant Plating is not parsing/populating Zone Data Entry fields	dev_points: null, qa_points: null
LOPS-7642	Story	Closed	Deon Hughes	Grant -a access for EPS and some LOPS members	dev_points: null, qa_points: null
LOPS-7575	Defect	Verified	Lev Evstratov	Failed to process action 'ProcessResultAction'. Reason: null when processing Normalization rundata	qa_points: null
LOPS-7551	Defect	Closed	Michael Livingston	gDNA Normalization runlog is not processing.	dev_points: null, qa_points: null
LOPS-7535	Defect	Closed	Lev Evstratov	Samples are not available in the Sample List after received via API. Plasma Isolation Worklist cannot be generated.	dev_points: null, qa_points: null
LOPS-7462	Defect	Closed	Michael Livingston	Sample List is empty no samples available	dev_points: null, qa_points: null
LOPS-7439	Defect	Closed	—	QC Review page is not loading	dev_points: null, qa_points: null
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	dev_points: null, qa_points: null
LOPS-6977	Story	Verified	Lev Evstratov	Create the pipeline for instrument integration runlogs	dev_points: null, qa_points: null
LOPS-6975	Story	Verified	Lev Evstratov	Update sgnipt worklist policies for folder hierarchy	dev_points: null, qa_points: null
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	dev_points: null, qa_points: null
LOPS-6885	Story	Closed	Howard LaHurreau	Spike - investigate impact to reagent validation and instrument integration with split prod instances	dev_points: null, qa_points: null
LOPS-6747	Tweak	Closed	Kersha Eddy	Create Methylation "Oxidation Stop" plates and gels list page	qa_points: null
LOPS-6699	Defect	Closed	—	Gene Specific Config missing : sgNIPT AM - sgNIPT gDNA GENE LR-PCR Barcoding - 1	dev_points: null, qa_points: null
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	dev_points: null, qa_points: null
LOPS-6512	Defect	Verified	Brandon Culver	sgNipt: Assay 44 - Barcoding workitems are not completed after barcoding runlog is processed	dev_points: null, qa_points: null
LOPS-6497	Tweak	Verified	Mehmet Ali Eken	Update user login attempts setting to 10	qa_points: null
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	qa_points: null
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	dev_points: null, qa_points: null
LOPS-6311	Story	Closed	Justin Jones	Ensure Extraction Managers are given Extraction Manager Job Type for Launch	dev_points: null, qa_points: null
LOPS-6282	Tweak	Verified	Brandon Culver	Update end repair runlog processor to look for trackitem.u_containerbarcode and not trackitem.u_barcode when processing	dev_points: null, qa_points: null
LOPS-6161	Story	Verified	Monish Grover	Add barcode scan to LV_TrackItemMultiLookup for easier and more compliant master mix process	dev_points: null, qa_points: null

Missing Parent Ticket

WARNING 91.0% pass rate (338 violations / 3750 applicable)

Tickets should have a parent (epic for stories, parent task for sub-tasks).

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9903	Task	Closed	—	Datamesh dashboard update Add Tracer Plate to Sample Search tab	parent_key: null

LOPS-tfMRD-62-20260209 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9460	Task	Closed	Valeria Vargas	SPIKE: Assay cancellation request sent from ARM was ignored by LOPS	parent_key: null

LOPS-tfMRD-60-20260112 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9594	Task	Closed	Klead Fusha	Changes for NCR-2026-0046	parent_key: null
LOPS-9495	Task	Closed	Klead Fusha	Screenshots for user guide Batching	parent_key: null
LOPS-9475	Task	Closed	Hani Yakan	Create an Integration Test that gives you sample data to at least step Storage->Verso Actions	parent_key: null
LOPS-9432	Task	Closed	Ron Enson	re-export NtrImportRunLogTask - 1 - By RunLogPolicy	parent_key: null

LOPS-tfMRD-59-20251229 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9376	Task	Closed	—	Testing NEB Updates	parent_key: null

LOPS-tfMRD-58-20251215 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9416	Task	Closed	Valeria Vargas	Script to identify cases >2 blood tubes or cfDNA samples	parent_key: null
LOPS-9362	Task	Closed	Ron Enson	Review release 1.0.4.0 user guide and create change notes	parent_key: null

LOPS-tfMRD-57-20251202 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9344	Task	Closed	Valeria Vargas	Update CODEOWNERS file for labworkflows-LV repo	parent_key: null
LOPS-9101	Task	Closed	Ron Enson	Review release 1.0.3.0 user guide and create change notes	parent_key: null

LOPS-tfMRD-54-20251020 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8851	Task	Closed	—	tfMRD : Deploy 1.0.2.0 in pspc environment.	parent_key: null
LOPS-8607	Task	Closed	Ron Enson	(tfmrd) Create new reagents_lops_user LV account as clone of intf_lops_user	parent_key: null

LOPS-tfMRD-53-20251006 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8852	Task	Closed	—	Log properties and connection id for inbound api calls	parent_key: null
LOPS-8696	Task	Closed	—	tfMRD - Deployment - Test the deployment in pre-prod in current sprint	parent_key: null
LOPS-8695	Task	Closed	Hani Yakan	tfMRD - Deployment - Run the consistency checker	parent_key: null

LOPS-tfMRD-51-20250908 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8531	Task	Closed	Jonathan Quinn	tfMRD sgNIPT sync for Iso and Ext	parent_key: null
LOPS-8403	Task	Closed	Hani Yakan	tfMRD - Manage tickets and release(s) for sprint 51	parent_key: null
LOPS-8098	Task	Closed	Hani Yakan	tfMRD - review the user guide for release 1.0.1.0	parent_key: null
LOPS-7890	Task	Closed	Hani Yakan	tfMRD prepare release version 1.0.1.0	parent_key: null

LOPS-tfMRD-50-20250825 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8201	Task	Closed	Klead Fusha	tfMRD - Update CODEOWNERS file	parent_key: null
LOPS-8191	Task	Closed	Hani Yakan	tfMRD - Manage tickets and release(s) for sprint 50	parent_key: null
LOPS-8146	Task	Closed	Jonathan Quinn	tfMRD - review the Samples tram line the user guide for release 1.0.1.0	parent_key: null

LOPS-tfMRD-49-20250811 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8147	Task	Closed	Isaac Vargas	tfMRD - review the Plates tram line user guide for release 1.0.1.0	parent_key: null
LOPS-7981	Task	Closed	—	tfMRD - Manage tickets and release(s) for spring 49	parent_key: null
LOPS-7856	Task	Closed	Hani Yakan	tfMRD Materialized Views - Review and adjust Entity Diagrams	parent_key: null

LOPS-tfMRD-48-20250728 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7971	Task	Closed	Isaac Vargas	Test tramstop fixes for Latitude Menu	parent_key: null
LOPS-7897	Task	Closed	Ron Enson	Create a diagram for the Assay Identifiers materialized view.	parent_key: null
LOPS-7831	Task	Closed	Hani Yakan	tfMRD - Manage tickets for sprint 48	parent_key: null
LOPS-7366	Task	Closed	Isaac Vargas	Globally unique keys for tfMRD	parent_key: null

LOPS Sprint 20250714 (47) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7556	Task	Closed	Dennis Lin	Re-review of the other files involved in the 5/14/25 WES/WGS merge	parent_key: null
LOPS-7546	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.0.1	parent_key: null
LOPS-7542	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.1	parent_key: null
LOPS-7541	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.1	parent_key: null

LOPS-tfMRD-47-20250713 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7693	Task	Closed	—	tfMRD - SQA review for LOPS-7366	parent_key: null
LOPS-7635	Task	Closed	Isaac Vargas	Merge Develop into LOPS-tfMRD-1.0.1.0	parent_key: null
LOPS-7632	Task	Closed	Kersha Eddy	tfMRD user guide - 1.0.1.0 Update user guide based on user questions	parent_key: null
LOPS-7577	Task	Closed	Isaac Vargas	Run python consistency checker on Develop and e2e (07/15/25 post-deployment)	parent_key: null
LOPS-7540	Task	Closed	Hani Yakan	Create, plan and maintain sprint LOPS-tfMRD-47-20250714	parent_key: null
LOPS-7531	Task	Closed	Kersha Eddy	Update new Verso Actions UI Page	parent_key: null
LOPS-7021	Task	Closed	Klead Fusha	Configure LabVantage on Production tfMRD RDS Instance	parent_key: null

LOPS-tfMRD-46-20250630 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7344	Task	Closed	Kersha Eddy	Create new tfMRD User, Role and Action	parent_key: null
LOPS-7290	Task	Closed	Hani Yakan	Create, plan and maintain sprint LOPS-tfMRD-46-20250630	parent_key: null

LOPS Sprint 20250630 (46) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7527	Task	Closed	Ize Imai	CODEOWNERS update	parent_key: null
LOPS-7409	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	parent_key: null
LOPS-7408	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	parent_key: null
LOPS-7378	Task	Closed	Ray Ward	WES/WGS 1.0.0.0 - RC environment deployment	parent_key: null
LOPS-7377	Task	Closed	—	WES/WGS 1.0.0.0 - PSPC environment deployment	parent_key: null
LOPS-7339	Story	Verified	Ray Ward	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	parent_key: null
LOPS-7108	Task	Closed	Ariel Jirau	Add Kubernetes requests and limits for ephemeral storage to protect from evictions	parent_key: null
LOPS-7088	Task	Closed	Ray Ward	Investigation of increasing long run times for "Accept Partial" for QC review steps	parent_key: null

LOPS Sprint 20250616 (45) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7295	Task	Closed	Isaac Vargas	Add Logistics Users	parent_key: null
LOPS-7289	Task	Closed	Ron Enson	Reagent track item container type issue in E2E	parent_key: null
LOPS-7216	Task	Closed	Kersha Eddy	Disables auditing on the U_INTFTRANS table	parent_key: null
LOPS-7204	Task	Closed	Ron Enson	delete master data for labxe2e-03	parent_key: null
LOPS-7181	Task	Closed	Isaac Vargas	Update Assay Template Send Status Flag	parent_key: null
LOPS-7179	Task	Closed	Isaac Vargas	Export Core Master Data (Users, Instruments, Reagent Types) from labxe2e-03 for Post-Reset Reimport	parent_key: null
LOPS-7122	Task	Closed	Isaac Vargas	Assign tfMRD user job type to user tfMRD_AU_LabOps	parent_key: null
LOPS-7113	Task	Closed	Kersha Eddy	Update Size Selection Quantification page	parent_key: null
LOPS-7095	Task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8)	parent_key: null
LOPS-7094	Task	Closed	—	WGS automated regression - LOPS 1.2.1.0 (M8)	parent_key: null
LOPS-7093	Task	Closed	—	WES automated regression - LOPS 1.2.1.0 (M8)	parent_key: null
LOPS-7070	Task	Closed	Kersha Eddy	Update User Guide with new tfMRD UI	parent_key: null
LOPS-6990	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - Additional LOPS data mining	parent_key: null
LOPS-6781	Task	Closed	Leonid Garin	Histo Guided Workflow Experiment	parent_key: null

LOPS Sprint 20250602 (44) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6985	Task	Closed	Isaac Vargas	Deploy latest Develop to e2e and Run python consistency checker	parent_key: null
LOPS-6962	Task	Closed	Ron Enson	Add missing tfMRD equipment for e2e	parent_key: null
LOPS-6961	Task	Closed	Ron Enson	tfMRD User Guide development	parent_key: null
LOPS-6954	Task	Closed	Klead Fusha	IT failing for TfmrdSizeSelectionBead1WorklistGenerationIT.processResults_validate	parent_key: null
LOPS-6897	Task	Closed	Kersha Eddy	Update tfMRD User Guide to produce final draft	parent_key: null
LOPS-6879	Task	Closed	Ron Enson	tfMRD e2e tasks	parent_key: null
LOPS-6815	Task	Closed	Swati Giri	Kafka message filtering, to limit the accessioning to just WES/WGS assays/samples.	parent_key: null
LOPS-6739	Task	Opened	—	Prep e2e environment for data for user led UAT	parent_key: null

LOPS Sprint 20250519 (43) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6912	Task	Closed	Matt Smith	Fix Issues With Python Script to Check Environment Deployment Consistency	parent_key: null
LOPS-6857	Task	Closed	—	Add Dennis Lin and Ray Ward to the set of Java & Javascript code approvers	parent_key: null
LOPS-6853	Story	Verified	Swati Giri	Inclusion of LOPS-6703 in the LOPS 1.2.0.2 hotfix	parent_key: null
LOPS-6843	Task	Closed	Monish Grover	LOPS 1.2.0.2 - Assessment of sgNIPT changes on shared WES/WGS code	parent_key: null
LOPS-6842	Task	Closed	—	LOPS 1.2.0.2 - Manual WES / WGS regression testing	parent_key: null
LOPS-6841	Task	Closed	—	LOPS 1.2.0.2 - WES/WGS automated regression	parent_key: null

LOPS Sprint 20250505 (42) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6839	Task	Closed	Klead Fusha	Promote Array Results OOTB should not attempt to push empty data items	parent_key: null
LOPS-6810	Task	Closed	Kersha Eddy	Update the following reagents copied from LV1.0 into LOPS	parent_key: null
LOPS-6799	Task	Closed	—	LOPS 1.2.0.1: WES/WGS automated regression	parent_key: null
LOPS-6771	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - LOPS data mining	parent_key: null
LOPS-6755	Task	Closed	Klead Fusha	Improve Hybridization Runlog Processing performance	parent_key: null
LOPS-6707	Task	Closed	—	"Test_LibraryPrep_Blood_QcReview_AcceptPartial "Scala script is not creating sufficient amount of Sample to test Accept	parent_key: null
LOPS-6682	Task	Opened	Klead Fusha	Hybrid Sample Selection Worklist - SampleNum	parent_key: null
LOPS-6672	Task	Closed	—	Proof of concept: Multiple LabVantage DBs in a single RDS Instance	parent_key: null
LOPS-6656	Task	Closed	Monish Grover	Investigation of a standalone WES/WGS LOPS instance	parent_key: null
LOPS-6602	Task	Closed	Hani Yakan	TF-MRD Vertical LOPS Planning Team - Sprint 41 [three times per week]	parent_key: null
LOPS-6535	Task	Closed	—	Create JIRA tickets based on EIT feedback	parent_key: null

LOPS Sprint 20250421 (41) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6562	Task	Closed	Matt Smith	Read-only access to the LOPS database for Monish Grover	parent_key: null

LOPS Sprint 20250407 (40) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6510	Task	Closed	Kersha Eddy	RunLog Policy "(Manual) - tfMRD Methylation Deamination - Change source layout to "tfMRD Methylation Oxidation Purifica	parent_key: null
LOPS-6506	Task	Closed	—	Prepare for M7 and Hotfix 8 Deployment	parent_key: null
LOPS-6496	Task	Closed	—	LOPS 1.1.2.0 automated testing: Final round	parent_key: null
LOPS-6471	Task	Closed	Hani Yakan	Setup test framework with team	parent_key: null
LOPS-6460	Task	Closed	Kevin Detweiler	LV LES module demo	parent_key: null
LOPS-6459	Task	Closed	Hani Yakan	TF-MRD Vertical LOPS Planning Team - LOPS Sprint 20250407 (40) [three times per week]	parent_key: null
LOPS-6417	Task	Closed	—	Investigate and fix issues related to sgnipt-integration-02 deployment with RDS	parent_key: null
LOPS-6401	Task	Opened	Ariel Jirau	Adjust development and test workloads resources in Kubernetes	parent_key: null
LOPS-6294	Task	Closed	Matt Smith	R/W Access to LOPS Prod DB	parent_key: null
LOPS-6264	Task	In Progress	Hani Yakan	LOPS-6190 - Test the implementation	parent_key: null
LOPS-6218	Task	In Progress	—	LOPS-6211 - go over existing step implementations and make sure corrections are not needed	parent_key: null
LOPS-6215	Task	Opened	—	LOPS-6211 - Review requirements with stakeholders and identify missing tickets	parent_key: null
LOPS-6097	Story	Opened	—	Method for automatically transitioning QC batches from "Completed" to "Reviewed" based on TBD criteria	parent_key: null
LOPS-6092	Task	Closed	Dennis Lin	WES Workflow E2E Workthrough	parent_key: null
LOPS-6061	Task	Closed	—	Generate list of lessons learned from LOPS Kubernetes production deployment	parent_key: null
LOPS-6060	Task	Closed	Ariel Jirau	Fix configserver integration with intfservice on Kubernetes	parent_key: null
LOPS-5406	Task	Code Review	Ariel Jirau	Document Engineering Focused Deployment Checklist	parent_key: null
LOPS-4837	Task	Reopened	—	Create a plan of migration from Rancher to k8s for LOPS and LV1	parent_key: null

LOPS Sprint 20250324 (39) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6260	Task	Closed	Ariel Jirau	Integration Environments Support (post k8s migration)	parent_key: null
LOPS-6244	Story	Verified	Monish Grover	Update gDNA RunDesign csv file to populate Plate 1 field with unique plate serial number + lot number + expiry	parent_key: null
LOPS-6226	Task	Closed	Ize Imai	Knowlege share for ReagentType and Units	parent_key: null
LOPS-6211	Task	Closed	Hani Yakan	LOPS-6211 - Map JIRA tickets to diagram activities	parent_key: null
LOPS-6193	Task	Closed	Leonid Garin	Adjust the scheduled task to retrieve the schemas list from the master source instead of CI_SCHEDULED_JOB-LOPS-5516_uplo	parent_key: null
LOPS-6169	Task	Closed	Ariel Jirau	Fix Kubernetes deployments on testing environments	parent_key: null
LOPS-6121	Task	Closed	Vasilii Sevriugin	Merge latest master changes into M7 branch	parent_key: null
LOPS-6098	Story	Verified	Ize Imai	expand column sort to apply to samples on plate OR rack	parent_key: null
LOPS-6042	Task	Closed	Vasilii Sevriugin	RMAN: the database archive logs should be deleted	parent_key: null
LOPS-6023	Task	Closed	Ariel Jirau	Enable Kubernetes deployments from conductor	parent_key: null
LOPS-5968	Task	Closed	—	LOPS 1.1.2.0 regression automated testing: Platform	parent_key: null
LOPS-5967	Task	Closed	—	LOPS 1.1.2.0 automated testing: WGS	parent_key: null
LOPS-5966	Task	Closed	—	LOPS 1.1.2.0 automated testing: WES	parent_key: null
LOPS-5953	Task	Closed	Ariel Jirau	Fix labworkflows-labvantage configuration for daybeforedeploy-01	parent_key: null
LOPS-5348	Story	Verified	Sri Gorantla	Residual Quant Array method/layout	parent_key: null

LOPS Sprint 20250310 (38) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6165	Story	Verified	Sri Gorantla	Associate LR-PCR barcode primer plates to gDNA LR-PCR barcoding plates	parent_key: null
LOPS-6093	Task	Closed	Alex Pakhunov	Update mock_wetlab_workflow.py Script to Prevent Assay Template Related Error	parent_key: null
LOPS-6072	Task	Closed	Ariel Jirau	Migrate master into develop branch for both infr and main application repositories (Kubernetes conversion)	parent_key: null
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	parent_key: null
LOPS-6045	Task	Closed	Nikita Tilkov	Add a host for the second DataBase for the Reagent Sync testing environment	parent_key: null
LOPS-6044	Task	Closed	Mikhail Dubrovin	Kafka 1.59.0 connectors work with unpredictable delay	parent_key: null
LOPS-5910	Story	Verified	Krishna Tanuku	Create a new run detail group for sgNIPt cfDNA PostLig Pur manual step	parent_key: null
LOPS-5855	Task	Closed	Alex Pakhunov	Investigation :: Debezium doesn't post LV DB updates to Kafka	parent_key: null
LOPS-5825	Story	Closed	Hani Yakan	Create "Process Types" for all the tfMRD work list steps and create respective reference values in corresponding referen	parent_key: null
LOPS-5796	Task	Closed	Swati Giri	Add Equipment needed for sgNIPT E2E testing to E2E environment	parent_key: null
LOPS-5586	Task	Closed	Ariel Jirau	Coordinate creation of a new environment for E2E UAT for tfMRD	parent_key: null
LOPS-5516	Task	Closed	Leonid Garin	Download production JSON schemas from the server to the S3 bucket once a day	parent_key: null

LOPS Sprint 20250224 (37) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5945	Task	Closed	Ize Imai	Knowledge share for asynchronous actions in LV	parent_key: null
LOPS-5924	Task	Closed	—	Merge 1.1.0.2, 1.1.1.1, 1.1.0.1, 1.1.1.0 items in Jama to Production	parent_key: null
LOPS-5902	Story	Verified	Meghana Joshi	Plate to Rack processor and loader for gDNA normalization	parent_key: null
LOPS-5879	Story	Verified	Mai Ton-Nu	Create cfDNA and gDNA reagents in LOPS	parent_key: null
LOPS-5875	Task	Closed	Meghana Joshi	Retest LOPS-4939 After Refactoring	parent_key: null
LOPS-5874	Task	Closed	—	Communicate Child Sample Creation issue to VantageCare	parent_key: null
LOPS-5872	Task	Closed	Ariel Jirau	Add confluence page with steps to prepare a RDS development instance for datamesh integration	parent_key: null
LOPS-5868	Task	Closed	Vasilii Sevriugin	Include 'autotest' env name into list for labworkflow Kafka schema register - register-schemas.sh	parent_key: null
LOPS-5756	Story	Closed	Alex Pakhunov	Give NtrJsonWorklistGenerator the ability to specify sample listing sort order	parent_key: null
LOPS-5686	Task	Closed	Ariel Jirau	Configure Fulfillment DMS Service integration with development RDS Oracle instance (g64 e2e)	parent_key: null
LOPS-5652	Story	Verified	Ron Enson	Create cfDNA and gDNA reagents in LOPS	parent_key: null
LOPS-5595	Story	Closed	Swati Giri	Updates to cfDNA and gDNA sequencing run test method parameters	parent_key: null
LOPS-5520	Task	Closed	—	cfDNA updates - Add new sample type for new NA12878 part - NR0835	parent_key: null
LOPS-5314	Story	Verified	Kevin Detweiler	Review of read-only job type changes	parent_key: null

LOPS Sprint 20250210 (36) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5826	Task	Closed	Ariel Jirau	Enhance Lambda code to be able to cope with different redshift schemas	parent_key: null
LOPS-5821	Task	Closed	—	SPIKE: Investigation of gDNA Extraction Quant sample and plate evaluation in LV1.0	parent_key: null
LOPS-5755	Task	Closed	—	Run automated regression test for hotfix 1.1.0.2 Platform	parent_key: null
LOPS-5754	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WGS	parent_key: null
LOPS-5753	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WES	parent_key: null
LOPS-5712	Task	Closed	Matt Smith	Account for access to LOPS Production	parent_key: null
LOPS-5682	Task	Closed	Alex Pakhunov	Update Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	parent_key: null
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	parent_key: null
LOPS-5616	Task	Closed	Vasilii Sevriugin	Validate User configuration	parent_key: null
LOPS-5615	Task	Closed	Kevin Detweiler	Commit Changes to DKC-100004 - DKC-100008 and DKC-100014 - DKC-100018 to the repo	parent_key: null
LOPS-5584	Task	Closed	Ariel Jirau	Fix broken "Integration Test" Step on Gitlab Pipeline Testing Stage for Kubernetes Branch Labworkflows	parent_key: null
LOPS-5562	Story	Verified	Ray Ward	Update End Repair Array method to add cfDNA controls in the correct positions	parent_key: null
LOPS-5476	Story	Verified	Krishna Tanuku	Update SourcePosition entry for End Repair worklist to remove "0" between the row and column for the tube position	parent_key: null
LOPS-5468	Task	Closed	Hani Yakan	Investigation of the configuration of the "intf_lops_user" LOPS user	parent_key: null
LOPS-5236	Task	Closed	—	Create Confluence Page for Interview Questions and Process	parent_key: null

LOPS Sprint 20250127 (35) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5566	Task	Closed	Monish Grover	Deploy latest sgNIPT release to sgnipt-integration-02 environment	parent_key: null
LOPS-5553	Task	Closed	Alex Pakhunov	Update python scripts to address latest changes for toDo list	parent_key: null
LOPS-5549	Task	Closed	Hani Yakan	Change Natera's Export for users to include force update	parent_key: null
LOPS-5521	Task	Closed	Ariel Jirau	Set "Validate Kafka Schemas" Gitlab pipeline validate stage step to manual to avoid failing the release pipeline	parent_key: null
LOPS-5510	Task	Closed	Swati Giri	Deploy LOPS-1.1.0.0 to the G64 demo environment	parent_key: null
LOPS-5508	Task	Closed	—	Merge the LOPS 1.1.1.0 (M6) branch into LOPS 1.1.2.0 (M7)	parent_key: null
LOPS-5493	Task	Closed	Ariel Jirau	K8S: Assay requests are not processed due to decryption issue	parent_key: null
LOPS-5459	Task	Closed	—	LOPS 1.1.1.0 automated testing: Platform	parent_key: null
LOPS-5458	Task	Closed	—	LOPS 1.1.1.0 automated testing: WGS	parent_key: null
LOPS-5375	Task	Closed	Mehmet Ali Eken	Create Spring Profiles for PSPC Environments	parent_key: null
LOPS-5344	Task	Closed	—	Run regression for G64 merge to Develop	parent_key: null
LOPS-5108	Story	Closed	Mikhail Makarin	Process post-extraction assay request for ASSAY-00057 (tfmrd-methyl-w-tracer-au-v1)	parent_key: null
LOPS-4601	Task	Closed	Ariel Jirau	Configure Gitlab repositories permission to ensure alignment with gitlab self-service deployment guidelines	parent_key: null

LOPS Sprint 20250113 (34) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5471	Task	Closed	Gianna Bell-Eunice	Deploy latest sgNIPT release into Sandbox environment	parent_key: null
LOPS-5457	Task	Closed	—	LOPS 1.1.1.0 automated testing: WES	parent_key: null
LOPS-5449	Task	Closed	—	Provide Report for WGS Matching Samples	parent_key: null
LOPS-5422	Task	Closed	Alex Pakhunov	DevTools: support multiple genes for lrPCR seq array	parent_key: null
LOPS-5421	Task	Closed	Alex Pakhunov	DevTools: automatically create HybCap seq array for lrPCR	parent_key: null
LOPS-5290	Task	Closed	Alex Pakhunov	Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	parent_key: null
LOPS-5285	Task	Closed	Mikhail Makarin	Update CODEOWNERS permissions	parent_key: null
LOPS-5281	Task	Closed	Mikhail Makarin	Upload Previous Version of OverOps for Web Containers	parent_key: null
LOPS-5257	Task	Closed	Vasilii Sevriugin	Update unit tests to reflect changes for SamRep Kafka and API contracts	parent_key: null
LOPS-5247	Task	Reopened	Leonid Garin	Investigate. Remove or mask PHI/PII information from LOPS logs	parent_key: null
LOPS-5005	Story	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue 2 (batchId and gene)	parent_key: null

sgNIPT Sprint 16 (32) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5146	Task	Closed	—	Revert basedepartment field on admin Sysuser to null	parent_key: null

WESonX Sprint 32 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5209	Task	Closed	Kevin Detweiler	Update intf_lops_user to enable Force Update flag	parent_key: null

WESonX Sprint 29 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4771	Task	Closed	—	Run regression testing for M3 build (Wes on X)	parent_key: null
LOPS-4736	Task	Closed	Swati Giri	Investigation: WES-LOPS: QC batch will not complete tube verification.	parent_key: null

WESonX Sprint 28 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4687	Task	Closed	—	Run regression for M2 - Implementation	parent_key: null
LOPS-4686	Task	Closed	—	Run regression for hotfix2 - Implementation	parent_key: null
LOPS-4548	Task	Closed	Kevin Detweiler	[SIG AU WES-X] Error trying to push Record Rundata Entered for Fragmentation step.	parent_key: null
LOPS-4542	Task	Closed	Matt Smith	WES-X Case 40300817.1-1-HNE Needs to move from In progress to Cancelled in LOPS	parent_key: null

WESonX Sprint 25 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3800	Task	Closed	Mai Ton-Nu	WES-X workflow practice	parent_key: null

WESonX Sprint 24 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3713	Task	Closed	—	Run Hybrid Capture WF Happy path with sample cancellation	parent_key: null
LOPS-3712	Task	Closed	—	Run Blood WF Happy path with sample cancellation	parent_key: null
LOPS-3710	Task	Closed	—	Run Tissue WF Happy path with sample cancellation	parent_key: null
LOPS-3661	Task	Closed	Michael Livingston	Check reagent class for controls in repo to make sure it doesn't overwrite master data	parent_key: null

WESonX Sprint 23 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3627	Task	Closed	Swati Giri	Manual Post pipeline kafka message	parent_key: null

WESonX Sprint 22 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3419	Task	Closed	—	Wes On X Test Cases and Automation Status Cleanup & Actualization	parent_key: null

WESonX Sprint 17 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2390	Task	Closed	Michael Livingston	Create New Group Test Methods for Re-Runs	parent_key: null

LV1 Sprint 235 (5/12-5/23) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6844	Task	Closed	Alex Pakhunov	Add Command to the alter_user.sql.j2 File to Give All Available Privileges to dbzuser on the CONTAINERTYPE Table	parent_key: null

LOPS WES/WGS 20260209 (62) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9937	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.6) to project branches	parent_key: null

LOPS WES/WGS 20260126 (61) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9715	Task	Closed	—	Review Initial Integration Tests for YALP–LOPS Histo and Research Configuration Handling	parent_key: null
LOPS-9687	Task	Closed	Ize Imai	Document current deployment and production support ticket process	parent_key: null

LOPS WES/WGS 20260112 (60) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9144	Task	Opened	—	Investigate Kafka message consumption	parent_key: null
LOPS-8446	Task	Opened	Dennis Lin	Clean-up of OOnSS-related spurious primer design jobs in LOPS	parent_key: null
LOPS-7854	Task	Opened	Dennis Lin	ARM / LOPS OOnSS Scenario Testing	parent_key: null

LOPS WES/WGS 20251215 (58) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9447	Task	Closed	—	Regression testing for JAMA upgrade	parent_key: null

LOPS WES/WGS 20251103 (55) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9141	Task	Closed	Ize Imai	Enable Debug mode for remote k8s hosted LOPS	parent_key: null

LOPS WES/WGS 20251020 (54) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8983	Task	Closed	Ize Imai	Prep 1.0.4.2 branch (shift 1.0.4.1 to 1.0.4.2, use 1.0.4.1 for ePatch)	parent_key: null
LOPS-8950	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.0) to project branches	parent_key: null
LOPS-8841	Task	Closed	Swati Giri	More repairs for the RC environment LOPS WES/WGS deployment	parent_key: null

LOPS WES/WGS 20251006 (53) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8492	Task	Closed	Ray Ward	Retrieval of quant results for lib prep re-runs	parent_key: null

LOPS WES/WGS 20250908 (51) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8443	Task	Closed	Ize Imai	Assist with ANALYTICS-36559 for Nate Johnson	parent_key: null
LOPS-8352	Task	Closed	Dennis Lin	Investigation of the "Add to Lops EPS Tickets"	parent_key: null

LOPS WES/WGS 20250825 (50) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8410	Task	Closed	Ize Imai	Knowledge share for Data File Definitions in LV1.0	parent_key: null
LOPS-8331	Task	Closed	Ize Imai	Merge second epatch (1.0.2.2) to weswgs-master and propagate to project branches	parent_key: null
LOPS-8286	Task	Closed	Ize Imai	Merge weswgs-master (1.0.2.0) and epatch (1.0.2.1) to project branches	parent_key: null

LOPS WES/WGS 20250811 (49) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8121	Task	Closed	Ize Imai	Merge weswgs-master (1.0.1.2) to project branches	parent_key: null
LOPS-8015	Task	Closed	Ize Imai	Toggle off auto assign reviewers for WESWGS merge request bot	parent_key: null
LOPS-7858	Task	Closed	Ize Imai	Merge weswgs-master to project branches	parent_key: null

LOPS WES/WGS 20250728 (48) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7466	Story	Verified	Ray Ward	Improvements to Assay QC NtrSampleAnalysisReview page for performance	parent_key: null

G64onLOPS Sprint 5 (20) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2959	Task	Closed	Hani Yakan	Merge LOPS-MVP-20 into LOPS-DEV-20	parent_key: null

G64onLOPS Sprint 17 (32) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5073	Task	Closed	—	G64 Regression Testing - Dmitry	parent_key: null

G64onLOPS Sprint 16 (31) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5001	Story	Closed	Brad Garrett	Update ProcessType used for WGS at Blood Extraction to WES ProcessType to support QS Processing	parent_key: null

G64onLOPS Sprint 14 (29) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4874	Task	Closed	Klead Fusha	Add the base department to the admin user in the DB in the patch deployment.	parent_key: null
LOPS-4836	Task	Closed	—	Deployment issue on develop: "Schema being registered is incompatible with an earlier schema for subject "events.assay-r	parent_key: null
LOPS-4762	Task	Closed	—	Regressin Run on MR for Launch into develop	parent_key: null

LOPS Sprint 20241230 (33) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5279	Task	Closed	—	Fix memory killed error on python script to export db data to s3	parent_key: null
LOPS-5259	Task	Closed	—	Merge M3 items to Production in Jama	parent_key: null
LOPS-5252	Task	Closed	Leonid Garin	Merge missed MR for LOPS-3935 into LOPS 1.1.1.0	parent_key: null
LOPS-5229	Task	Closed	Mikhail Makarin	Add Missing Changes from LOPS-4236	parent_key: null
LOPS-5208	Task	Closed	—	Create a gitlab project to maintain labworkflows datamesh code assets	parent_key: null
LOPS-5139	Story	Verified	Kathy Dao	Configure Verso Freezer StorageUnitType	parent_key: null
LOPS-5075	Task	Closed	—	G64 Regression Testing - Petar	parent_key: null
LOPS-4679	Task	Closed	Matt Smith	Create user account in LOPS prod	parent_key: null

LOPS Sprint 32 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5228	Task	Closed	Vasilii Sevriugin	Update Web and Intf Image Tags for M4 Release	parent_key: null
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	parent_key: null
LOPS-5175	Task	Closed	Ize Imai	Knowledge share for dispose and rerun microdels	parent_key: null
LOPS-5082	Task	Closed	Meghana Joshi	Add NtrClearCacheAction to LOPS	parent_key: null
LOPS-5077	Task	Closed	—	G64 Regression Testing - Serhii	parent_key: null
LOPS-5071	Task	Closed	—	G64 Regression Testing - Shweta	parent_key: null
LOPS-5070	Task	Closed	—	G64 Regression Testing - Mike N.	parent_key: null
LOPS-5051	Task	Closed	Ariel Jirau	Add Kubernetes workloads annotations to enable datadog logging	parent_key: null

LOPS Sprint 31 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5097	Task	Closed	Meghana Joshi	Create a new version of the M6 branch	parent_key: null
LOPS-5078	Task	Closed	—	G64 Regression Testing - Nikolai	parent_key: null
LOPS-5074	Task	Closed	—	G64 Regression Testing - Oksana	parent_key: null
LOPS-5069	Task	Closed	—	G64 Regression Testing - Rufat	parent_key: null
LOPS-5064	Task	Closed	Ariel Jirau	Investigate and fix issue with S3 bucket for Snowflake	parent_key: null
LOPS-5004	Task	Closed	Alex Pakhunov	Bad image error in Kubernetes through the deploying Reagent Sync	parent_key: null
LOPS-4984	Task	Closed	—	GHP E2E Run1: Missing 21 LOPS_ASSAY_IDs in ASSAY_QC	parent_key: null
LOPS-4947	Task	Closed	—	Run platform regression for M4	parent_key: null
LOPS-4930	Task	Closed	—	GHP E2E Run 1: SOURCE_WORKITEM_ID is the same for Ext and LibPrep	parent_key: null
LOPS-4912	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into LOPS-G64-E2E	parent_key: null
LOPS-4892	Task	Closed	Alex Pakhunov	2 different control quants for 2376-TDNA and PSrework-WLP2	parent_key: null
LOPS-4822	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into Develop	parent_key: null
LOPS-4672	Task	Closed	Mikhail Makarin	Support LV1 G64 user e2e testing during morning hours	parent_key: null

LOPS Sprint 30 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4950	Task	Closed	—	Update helm configuration to fix development LabVantage db persistence	parent_key: null
LOPS-4821	Task	Closed	Meghana Joshi	Merge the WES-X Post-Launch P1 branch into M4	parent_key: null

LOPS Sprint 28 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4858	Task	Closed	Brandon Culver	Remove Category and Role exports from Natera LV_ReagentType Custom Export Script	parent_key: null
LOPS-4705	Task	Closed	—	Assay QC metrics - generate LOPS workflow status event in G64 AV env	parent_key: null
LOPS-4688	Task	Closed	—	Run regression for M2	parent_key: null
LOPS-4685	Task	Closed	—	Run regression for hotfix2	parent_key: null
LOPS-4659	Task	Closed	Deon Hughes	Create user account in LOPS PROD for Justin Jones	parent_key: null
LOPS-4632	Task	Closed	—	Run WES regression for launch	parent_key: null
LOPS-4631	Task	Closed	—	Run WES regression for launch	parent_key: null
LOPS-4629	Task	Closed	—	Run WES regression for launch	parent_key: null
LOPS-4628	Task	Closed	—	Run WES regression for launch	parent_key: null
LOPS-4622	Task	Closed	Mikhail Makarin	Cherry pick tickets for LOPS M2 (1.0.2.0)	parent_key: null
LOPS-4584	Task	Closed	Matt Smith	Create a new branch for M2	parent_key: null
LOPS-4581	Task	Closed	Matt Smith	Give RO access to LOPS db	parent_key: null
LOPS-3950	Story	Closed	Lev Evstratov	Support Assay Request Messages with ERROR or CANCEL action codes	parent_key: null
LOPS-3775	Task	Closed	—	Run regression test for WES	parent_key: null
LOPS-3774	Task	Closed	—	Run regression test for WES	parent_key: null
LOPS-3773	Task	Closed	—	Run regression test for WES	parent_key: null

LOPS Sprint 29 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4794	Task	Closed	—	ReagentSync: NPE in the connector filter	parent_key: null
LOPS-4772	Task	Closed	—	Run platform regression testing for M3 build	parent_key: null
LOPS-4712	Task	Closed	Alex Pakhunov	AWS S3 G64 E2E Upload	parent_key: null
LOPS-4630	Task	Closed	—	Run WES regression for launch	parent_key: null
LOPS-4610	Task	Closed	—	Create a branch for sgNIPT phase 2	parent_key: null
LOPS-4558	Task	Closed	Meghana Joshi	Refresh Post Launch Branch Into Develop and Correct Missing WES Functionality	parent_key: null
LOPS-4538	Task	Closed	Vasiliy Kumaev	Additional hard-coded reference to the "LIMS" schema	parent_key: null
LOPS-3756	Task	Closed	Valeria Vargas	Update the JBoss memory allocation for the PSPC and E2E environments	parent_key: null

LOPS Sprint 27 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4162	Task	Closed	—	Create new branch for M1	parent_key: null
LOPS-4123	Task	Closed	Vladimir Piyanov	Cherry pick changes for LOPS M1 release with ARM preview	parent_key: null
LOPS-4117	Task	Closed	Ariel Jirau	Develop quick guide documentation for Gitlab & Terraform integration	parent_key: null
LOPS-4106	Task	Closed	Ize Imai	Knowledge share for action archiving files in shared drive	parent_key: null
LOPS-2505	Task	Closed	—	Set up connection to Pipeline's Rest API for pipeline integration	parent_key: null

LOPS Sprint 26 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3927	Task	Closed	Meghana Joshi	CTA2 e2e Support	parent_key: null

LOPS Sprint 25 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3922	Task	Closed	Klead Fusha	Prod / e2e Support	parent_key: null
LOPS-3803	Task	Closed	Ize Imai	Knowledge share reagent lot generation for E2E environment	parent_key: null

LOPS Sprint 23 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3408	Task	Closed	Klead Fusha	WESX-AV support LV-1.0	parent_key: null

LOPS Sprint 24 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3368	Task	Closed	Brandon Culver	Update CODEOWNERS permissions for sgNIPT devs	parent_key: null

LOPS Sprint 22 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2923	Task	Closed	Brandon Culver	Update CODEOWNERS permissions	parent_key: null

LOPS Sprint 18 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2897	Task	Closed	Matt Smith	Restore Previous DB Docker Image Tag	parent_key: null

LOPS Sprint 13 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1761	Task	Closed	—	Change configs for lwstaging-11 to point to the kafka deployed from Kubernetes	parent_key: null

LOPS Sprint 11 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1600	Task	Closed	Alex Pakhunov	Script to generate runlogs	parent_key: null
LOPS-1587	Task	Closed	—	LOPS - assay status changes to "completed" instead of "in progress"	parent_key: null
LOPS-1505	Task	Closed	—	LOPS does not generate WES extraction kafka message for EDTA samples (events.labops.workflow.status.v1)	parent_key: null

LOPS Sprint 14 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1517	Task	Closed	Vladimir Piyanov	LOPS running natively on arm64	parent_key: null

LOPS Sprint 10 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1446	Task	Closed	Matt Smith	Child sample is not created using Actions	parent_key: null
LOPS-1410	Task	Closed	Matt Smith	Blood gDNA is not created	parent_key: null

LOPS Sprint 09 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1403	Task	Closed	Brandon Culver	Investigate and fix child sample issues in gsp integration env	parent_key: null
LOPS-1347	Task	Closed	—	SW e2e support	parent_key: null
LOPS-1299	Task	Closed	—	KEH k8s configuration for staging-572	parent_key: null
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	parent_key: null

LOPS Sprint 08 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1296	Task	Closed	—	Pipeline - LOPS integration: results investigation	parent_key: null
LOPS-1181	Task	Closed	Vasilii Sevriugin	Investigate issues with Pipe Results message and coordinate with Pipelines for testing and fix	parent_key: null
LOPS-1162	Task	Closed	—	LOPS jama wes on x test cases reorg for the systems testing team	parent_key: null
LOPS-1161	Task	Closed	Matt Smith	Update custom action to OOTB Action for creating child samples from child sample plan	parent_key: null

LOPS Sprint 07 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1116	Task	Closed	—	Deploy qa-86 kafka-event-hub to k8s	parent_key: null

LOPS Sprint 06 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1046	Task	Closed	—	E2E Dry Run Testing	parent_key: null

LOPS Sprint 05 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-916	Task	Closed	—	Fix broken web image in LOPS-MVP-5 branch	parent_key: null
LOPS-878	Story	Closed	Michael Livingston	Create Test Methods for Sig WES Downstream	parent_key: null
LOPS-873	Task	Closed	Brad Garrett	Prep for Assay QC Demo to CLS	parent_key: null

LOPS Sprint 04 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-838	Story	Verified	Vasiliy Kumaev	The system shall have the ability to generate Exceptions.	parent_key: null
LOPS-835	Task	Closed	Brandon Culver	Import Sig WES Reagent types into LOPS Repo	parent_key: null
LOPS-821	Story	Verified	Vasiliy Kumaev	The system shall allow users to associate an Exception with an assay instance.	parent_key: null
LOPS-820	Story	Verified	Vasiliy Kumaev	The system shall provide users with the ability to configure Exception Codes.	parent_key: null
LOPS-780	Story	Verified	Vasiliy Kumaev	The system shall have the ability to record the Sample Expiration Date	parent_key: null

LOPS Sprint 03 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-813	Task	Closed	—	Prepare for and execute LOPS UX demo for Lab Ops	parent_key: null
LOPS-812	Task	Closed	Michael Livingston	Platform Integration Demo	parent_key: null
LOPS-785	Task	Closed	—	Test LIMS - LOPS integration - accessioning workflow for samples	parent_key: null

LOPS Sprint 02 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-793	Task	Closed	—	Integration tracking with Signatera team	parent_key: null
LOPS-775	Task	Closed	Brad Garrett	Create design plan for approving and rejecting the datasets and how to trigger the completion of assays	parent_key: null
LOPS-758	Task	Closed	—	Review and update Automation status for test cases	parent_key: null

LOPS Sprint 01 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-759	Task	Closed	Brad Garrett	Outline Action Execution flow for Instrument RunData processing	parent_key: null
LOPS-754	Task	Closed	Matt Smith	Update LOPS External JAR Version	parent_key: null
LOPS-735	Task	Closed	—	Create Prototype for WES on X Extraction Quant	parent_key: null
LOPS-730	Task	Closed	Brad Garrett	Spike Task: Prototype Array transfers and Array method assignment in the workflow module	parent_key: null

No Sprint Assigned (3 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9897	Task	Closed	Bob Ruff	Research for Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	parent_key: null
LOPS-7921	Task	Closed	Catalin Parvana	WES/WGS - Add Merge Request Bot to GitLab LabWorkflows repo	parent_key: null
LOPS-6393	Task	Closed	—	Updated list of WES / WGS manual test cases	parent_key: null

Missing Developer

CRITICAL 85.8% pass rate (682 violations / 4810 applicable)

All ticket types should have a developer assigned.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10052	Tweak	Opened	—	Update Passing Quant values for Controls and/or Samples with placeholder values	developer: null
LOPS-9992	Tweak	Opened	—	[new scope] Update plate layout for lib quant	developer: null
LOPS-9903	Task	Closed	—	Datamesh dashboard update Add Tracer Plate to Sample Search tab	developer: null
LOPS-9505	Sub-task	Opened	—	Create / Update PSD's	developer: null

LOPS-tfMRD-59-20251229 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9486	Story	In Grooming	—	Read and Process Runfile for MTM Validation	developer: null
LOPS-9376	Task	Closed	—	Testing NEB Updates	developer: null

LOPS-tfMRD-54-20251020 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8851	Task	Closed	—	tfMRD : Deploy 1.0.2.0 in pspc environment.	developer: null

LOPS-tfMRD-53-20251006 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8852	Task	Closed	—	Log properties and connection id for inbound api calls	developer: null
LOPS-8805	Task	Closed	—	Update mv_tfmrd_array_results to include array method instance	developer: null
LOPS-8696	Task	Closed	—	tfMRD - Deployment - Test the deployment in pre-prod in current sprint	developer: null
LOPS-7550	Tweak	Closed	—	Prevent Incremental Filename Duplication on Repeated Manual Uploads (size selection quant, pool dilution quant)	developer: null

LOPS-tfMRD-51-20250908 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7893	Sub-task	Closed	—	Update tickets for release 1.0.1.0	developer: null
LOPS-7892	Sub-task	Closed	—	Update user guide for release 1.0.1.0	developer: null

LOPS-tfMRD-50-20250825 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7767	Defect	Closed	—	Runfolder information missing in Assay QC page	developer: null
LOPS-7435	Sub-task	Closed	—	Materialized View for Sample Approval Info	developer: null

LOPS-tfMRD-49-20250811 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7981	Task	Closed	—	tfMRD - Manage tickets and release(s) for spring 49	developer: null

LOPS-tfMRD-48-20250728 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7833	Defect	Closed	—	tfMRD UI improvements - Fix crash in site menu	developer: null

LOPS Sprint 20250714 (47) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7546	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.0.1	developer: null
LOPS-7542	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.1	developer: null
LOPS-7541	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.1	developer: null
LOPS-7484	Story	Closed	—	Histology: WES Incidents Page	developer: null
LOPS-7480	Story	Closed	—	Histology: WGS Dissection Page	developer: null
LOPS-7478	Story	Closed	—	Histology: WES Pathology Review Page	developer: null
LOPS-7476	Story	Closed	—	Histology: WGS H&E Staining Page	developer: null
LOPS-7474	Story	Closed	—	Histology: WGS Embedding Page	developer: null

LOPS-tfMRD-47-20250713 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7693	Task	Closed	—	tfMRD - SQA review for LOPS-7366	developer: null

LOPS-tfMRD-46-20250630 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7539	Tweak	Opened	—	Update SourcePosition to SourceWell header in Worklists, Runlogs and Paramete	developer: null
LOPS-6616	Defect	Closed	—	PerformAutodisposition action throws error: Datasets do not have mandatory BATCH_LANE sdimetric	developer: null

LOPS Sprint 20250630 (46) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7409	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	developer: null
LOPS-7408	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	developer: null
LOPS-7377	Task	Closed	—	WES/WGS 1.0.0.0 - PSPC environment deployment	developer: null

LOPS Sprint 20250616 (45) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7243	Task	Closed	—	Update error codes	developer: null
LOPS-7210	Defect	Closed	—	Error Executing SQL for LHRTransfer When Transferring Two 'Library Amplification' Plates	developer: null
LOPS-7098	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Mila	developer: null
LOPS-7097	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Serhii	developer: null
LOPS-7096	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Dragana	developer: null
LOPS-7095	Task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8)	developer: null
LOPS-7094	Task	Closed	—	WGS automated regression - LOPS 1.2.1.0 (M8)	developer: null
LOPS-7093	Task	Closed	—	WES automated regression - LOPS 1.2.1.0 (M8)	developer: null
LOPS-5547	Story	Closed	—	Rework Actions for Sequencing	developer: null

LOPS Sprint 20250602 (44) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6972	Task	Closed	—	Upgrade to latest engine version - eng-lops-labxe2e-03 AWS RDS Instance	developer: null
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	developer: null
LOPS-6739	Task	Opened	—	Prep e2e environment for data for user led UAT	developer: null
LOPS-6640	Task	Closed	—	Spike - Assess if the check for Sequencer serialnum and side should be removed from the logic in processing the sequenci	developer: null
LOPS-5702	Story	Closed	—	cfDNA PostLib Quant Plating (Hamilton Vantage)	developer: null

LOPS Sprint 20250519 (43) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6857	Task	Closed	—	Add Dennis Lin and Ray Ward to the set of Java & Javascript code approvers	developer: null
LOPS-6842	Task	Closed	—	LOPS 1.2.0.2 - Manual WES / WGS regression testing	developer: null
LOPS-6841	Task	Closed	—	LOPS 1.2.0.2 - WES/WGS automated regression	developer: null

LOPS Sprint 20250505 (42) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6799	Task	Closed	—	LOPS 1.2.0.1: WES/WGS automated regression	developer: null
LOPS-6722	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	developer: null
LOPS-6707	Task	Closed	—	"Test_LibraryPrep_Blood_QcReview_AcceptPartial "Scala script is not creating sufficient amount of Sample to test Accept	developer: null
LOPS-6694	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	developer: null
LOPS-6688	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	developer: null
LOPS-6672	Task	Closed	—	Proof of concept: Multiple LabVantage DBs in a single RDS Instance	developer: null
LOPS-6599	Task	Closed	—	(work in progress ignore for now) tfMRD page	developer: null
LOPS-6544	Sub-task	Closed	—	LOPS-6535 - Optimize tfMRD user experience	developer: null
LOPS-6537	Sub-task	Closed	—	LOPS-6535 - Analyze ISO/EXT -PLM and -DNA barcode formatting	developer: null
LOPS-6535	Task	Closed	—	Create JIRA tickets based on EIT feedback	developer: null
LOPS-6392	Task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	developer: null
LOPS-6331	Task	Closed	—	WES/WGS automated regression	developer: null
LOPS-5990	Sub-task	Closed	—	LOPS-4501 - upload example JSON to confluence	developer: null
LOPS-5973	Sub-task	Closed	—	LOPS-4501 - Test the implementation	developer: null
LOPS-5972	Sub-task	Closed	—	LOPS-4501 - Send for QA	developer: null
LOPS-5971	Sub-task	Closed	—	LOPS-4501 - Send for review	developer: null
LOPS-5970	Sub-task	Closed	—	LOPS-4501 - Create Merge request	developer: null
LOPS-5957	Sub-task	Closed	—	LOPS-4501 - Create specifications	developer: null
LOPS-5956	Sub-task	Closed	—	LOPS-4501 - Implement the design	developer: null
LOPS-5955	Sub-task	Closed	—	LOPS-4501 - Validate requirements	developer: null
LOPS-5954	Sub-task	Closed	—	LOPS-4501 - Design Ticket	developer: null

LOPS Sprint 20250421 (41) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6063	Sub-task	Closed	—	Fill in gap between extraction and bead 1	developer: null
LOPS-6062	Sub-task	Closed	—	Add reagent NR-0750	developer: null
LOPS-4091	Task	Closed	—	Create a test for check a build consistency	developer: null

LOPS Sprint 20250407 (40) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6506	Task	Closed	—	Prepare for M7 and Hotfix 8 Deployment	developer: null
LOPS-6496	Task	Closed	—	LOPS 1.1.2.0 automated testing: Final round	developer: null
LOPS-6486	Task	Closed	—	Order Worklist Post-Pooling Quantification Plating by Well	developer: null
LOPS-6463	Sub-task	Closed	—	LOPS-6459 - 15-Apr-2025 - consolidate Mindy and Brad's notes into confluence	developer: null
LOPS-6417	Task	Closed	—	Investigate and fix issues related to sgnipt-integration-02 deployment with RDS	developer: null
LOPS-6218	Task	In Progress	—	LOPS-6211 - go over existing step implementations and make sure corrections are not needed	developer: null
LOPS-6215	Task	Opened	—	LOPS-6211 - Review requirements with stakeholders and identify missing tickets	developer: null
LOPS-6101	Defect	Closed	—	Extra "WES Actions" button for RO user role on Test -> Plates & Gels List‎	developer: null
LOPS-6097	Story	Opened	—	Method for automatically transitioning QC batches from "Completed" to "Reviewed" based on TBD criteria	developer: null
LOPS-6061	Task	Closed	—	Generate list of lessons learned from LOPS Kubernetes production deployment	developer: null
LOPS-5991	Task	Opened	—	Assess passwords for Prod and Non-Prod integration/api users	developer: null
LOPS-5568	Sub-task	Closed	—	Produce Sequence Run Message V2	developer: null
LOPS-5430	Tweak	Closed	—	Updates for Array Method for Pool Dilution	developer: null
LOPS-5429	Tweak	Closed	—	Updates for Array Method for Post-Pooling Quantification Reading	developer: null
LOPS-4837	Task	Reopened	—	Create a plan of migration from Rancher to k8s for LOPS and LV1	developer: null
LOPS-4025	Defect	Ready for Development	—	Error message when clicking 'Create Consumable Arrays' button on the Add Consumable Lot page	developer: null
LOPS-3989	Task	Opened	—	Sub-Task - Check all users and update the users that require Read Only jobtype to be set to Read Only	developer: null
LOPS-3075	Task	Blocked	—	Move IntfService Source Code and Job to Different Repo	developer: null
LOPS-1480	Tweak	Development Blocked	—	Create and manage instrument schedules at the model level	developer: null

LOPS Sprint 20250324 (39) (37 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6281	Task	Closed	—	Prepare LOPS/PIPE Integration demo	developer: null
LOPS-6268	Sub-task	Closed	—	LOPS-6190 - Send and work with QA	developer: null
LOPS-6267	Sub-task	Closed	—	LOPS-6190 - Send for review and work with reviewer	developer: null
LOPS-6266	Sub-task	Closed	—	LOPS-6190 - Upload example JSON to confluence if relevant	developer: null
LOPS-6265	Sub-task	Closed	—	LOPS-6190 - Create specifications	developer: null
LOPS-6261	Sub-task	Closed	—	LOPS-6190 - Validate Requirements	developer: null
LOPS-6235	Sub-task	Closed	—	Compare isolation and extraction steps configuration in labxe2e-03 to develop	developer: null
LOPS-6225	Task	Closed	—	Reagent Sync tfMRD EIT deployment - labxe2e-03 environment	developer: null
LOPS-6214	Sub-task	Closed	—	LOPS-6211 - Map JIRA tickets to diagram activities	developer: null
LOPS-6213	Sub-task	Closed	—	LOPS-6211 - Create a diagram with detailed sub-steps	developer: null
LOPS-6212	Task	Closed	—	Reorganization of test cases	developer: null
LOPS-6206	Task	Closed	—	Correct Worklist Policy Configs for Ligation Purification	developer: null
LOPS-6203	Task	Closed	—	Correct Worklist Policy Configurations for End Repair and A Tailing	developer: null
LOPS-6183	Defect	Verified	—	sgNIPT gDNA Sequencing RunDetails TM Equipment should be mandatory	developer: null
LOPS-6133	Task	Closed	—	Assay-43 test cases update and clean up	developer: null
LOPS-6108	Sub-task	Closed	—	LOPS-6079 - Send and work with QA	developer: null
LOPS-6107	Sub-task	Closed	—	LOPS-6079 - Send for review	developer: null
LOPS-6106	Sub-task	Closed	—	LOPS-6079 - Create Merge Request	developer: null
LOPS-6105	Sub-task	Closed	—	LOPS-6079 - Create specifications	developer: null
LOPS-6104	Sub-task	Closed	—	LOPS-6079 - Test the implementation	developer: null
LOPS-6103	Sub-task	Closed	—	LOPS-6079 - Implement the design or changes	developer: null
LOPS-6102	Sub-task	Closed	—	LOPS-6079 - Validate Requirements	developer: null
LOPS-6066	Defect	Closed	—	Runlog processing is not recorded in SDI Group	developer: null
LOPS-6024	Task	Closed	—	LOPS tfMRD EIT deployment - tfmrd-e2e-01 environment, Build 1	developer: null
LOPS-5968	Task	Closed	—	LOPS 1.1.2.0 regression automated testing: Platform	developer: null
LOPS-5967	Task	Closed	—	LOPS 1.1.2.0 automated testing: WGS	developer: null
LOPS-5966	Task	Closed	—	LOPS 1.1.2.0 automated testing: WES	developer: null
LOPS-5964	Task	Closed	—	Run regression for Reagent sync with new Kafka version 1.59	developer: null
LOPS-5906	Task	Closed	—	Deploy LOPS 1.1.1.2 (M6 Kubernetes) into Production (Rancher to Kubernetes Environment Migration)	developer: null
LOPS-5858	Task	Closed	—	Generate new or uplift current queries to account for the changed data model related to Pipeline metrics in sgNITP	developer: null
LOPS-5812	Sub-task	Closed	—	7 - Move to SQA	developer: null
LOPS-5811	Sub-task	Closed	—	6 - Find Reviewer	developer: null
LOPS-5810	Sub-task	Closed	—	5 - Create Spec	developer: null
LOPS-5809	Sub-task	Closed	—	4 - Create Merge Request	developer: null
LOPS-5808	Sub-task	Closed	—	3 - Implement, Test, Export	developer: null
LOPS-5807	Sub-task	Closed	—	2 - Create Branch	developer: null
LOPS-5806	Sub-task	Closed	—	1 - Link Requirements	developer: null

LOPS Sprint 20250310 (38) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	developer: null
LOPS-6007	Task	Closed	—	Testing of a strategy for a resequencing planned deviation for G64	developer: null
LOPS-5993	Tweak	Closed	—	Update Threshold for G64 Sequencing Run Metric	developer: null
LOPS-5923	Story	Closed	—	Test only: Verify LOPS can process pipeline results containing value of E+09 magnitude	developer: null
LOPS-5909	Story	Closed	—	Test only: Trigger LRPCR pipeline via REST API (Controls)	developer: null
LOPS-5795	Task	Closed	—	Reagent Lot creation in sgNIPT E2E environment	developer: null
LOPS-5792	Defect	Closed	—	Sample container not assigned to gDNA PEXT to EXT transfer method	developer: null
LOPS-5768	Task	Closed	—	Test Behavior for Failed Filler Samples	developer: null
LOPS-5320	Task	Closed	—	Test Only: cfDNA sequencing manifest generation	developer: null

LOPS Sprint 20250224 (37) (30 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	developer: null
LOPS-5963	Task	Closed	—	Run automated regression for new Kafka version 1.59	developer: null
LOPS-5924	Task	Closed	—	Merge 1.1.0.2, 1.1.1.1, 1.1.0.1, 1.1.1.0 items in Jama to Production	developer: null
LOPS-5903	Story	Closed	—	Test only: LRPCR - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	developer: null
LOPS-5874	Task	Closed	—	Communicate Child Sample Creation issue to VantageCare	developer: null
LOPS-5750	Sub-task	Closed	—	7 - Move to SQA	developer: null
LOPS-5749	Sub-task	Closed	—	6 - Find Reviewer	developer: null
LOPS-5748	Sub-task	Closed	—	5 - Create Spec	developer: null
LOPS-5747	Sub-task	Closed	—	4 - Create Merge Request	developer: null
LOPS-5746	Sub-task	Closed	—	3 - Implement, Test, Export	developer: null
LOPS-5745	Sub-task	Closed	—	2 - Create Branch from release/Develop	developer: null
LOPS-5744	Sub-task	Closed	—	1 - Link Requirements	developer: null
LOPS-5716	Task	Closed	—	LOPS 1.1.1.2 automated testing: Platform	developer: null
LOPS-5715	Task	Closed	—	LOPS 1.1.1.2 automated testing: WGS (k8s)	developer: null
LOPS-5714	Task	Closed	—	LOPS 1.1.1.2 automated testing: WES (K8s)	developer: null
LOPS-5713	Task	Closed	—	Labworkflows local environment validation: validate that configuration changes made for Kubernetes does not affect runn	developer: null
LOPS-5634	Sub-task	Closed	—	8-LOPS-5512 subtask - Move ticket to SQA	developer: null
LOPS-5633	Sub-task	Closed	—	7-LOPS-5512 subtask - Find someone to review	developer: null
LOPS-5632	Sub-task	Closed	—	6-LOPS-5512 subtask - Create specification(s)	developer: null
LOPS-5631	Sub-task	Closed	—	4-LOPS-5512 subtask - Create a merge request	developer: null
LOPS-5630	Sub-task	Closed	—	3-LOPS-5512 subtask - Implement, test the change and export	developer: null
LOPS-5629	Sub-task	Closed	—	2-LOPS-5512 subtask - Create a branch from release/Develop	developer: null
LOPS-5628	Sub-task	Closed	—	1-LOPS-5512 subtask - Link the requirements with a reader friendly link	developer: null
LOPS-5556	Story	Closed	—	Update LOPS API Pipeline Outputs to also send collection kit in requested assay	developer: null
LOPS-5520	Task	Closed	—	cfDNA updates - Add new sample type for new NA12878 part - NR0835	developer: null
LOPS-5400	Story	Closed	—	Test only: NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	developer: null
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	developer: null
LOPS-4903	Story	Verified	—	PacBio LRPCR - Assay QC UI (1 of 3 - General, RunResult, Batch)	developer: null
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	developer: null
LOPS-2751	Story	Closed	—	Support actions at gDNA extraction quant results review	developer: null

LOPS Sprint 20250210 (36) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5821	Task	Closed	—	SPIKE: Investigation of gDNA Extraction Quant sample and plate evaluation in LV1.0	developer: null
LOPS-5755	Task	Closed	—	Run automated regression test for hotfix 1.1.0.2 Platform	developer: null
LOPS-5754	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WGS	developer: null
LOPS-5753	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WES	developer: null
LOPS-5667	Sub-task	Closed	—	7-LOPS-5562 subtask - Move ticket to SQA	developer: null
LOPS-5666	Sub-task	Closed	—	6-LOPS-5562 subtask - Find someone to review	developer: null
LOPS-5665	Sub-task	Closed	—	5-LOPS-5562 subtask - Create specification(s)	developer: null
LOPS-5664	Sub-task	Closed	—	4-LOPS-5562 subtask - Create a merge request	developer: null
LOPS-5663	Sub-task	Closed	—	3-LOPS-5562 subtask - Implement, test the change and export	developer: null
LOPS-5662	Sub-task	Closed	—	2-LOPS-5562 subtask - Create a branch from release/Develop	developer: null
LOPS-5661	Sub-task	Closed	—	1-LOPS-5562 subtask - Link the requirements with a reader friendly link	developer: null
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	developer: null
LOPS-5611	Story	Verified	—	Test only: PacBio LRPCR - Record sequencingSampleId to assay attributes	developer: null
LOPS-5609	Story	Verified	—	Sequencing Prep: Support Selection of 'Inline QC Valid' Reagents (Test Only)	developer: null
LOPS-5598	Defect	Closed	—	The gDNA quantification result does not align with the specified rule conditions.	developer: null
LOPS-5236	Task	Closed	—	Create Confluence Page for Interview Questions and Process	developer: null
LOPS-4204	Task	Closed	—	Change LOPS User Timeout Threshold to Release Licenses and Connections	developer: null

LOPS Sprint 20250127 (35) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5508	Task	Closed	—	Merge the LOPS 1.1.1.0 (M6) branch into LOPS 1.1.2.0 (M7)	developer: null
LOPS-5459	Task	Closed	—	LOPS 1.1.1.0 automated testing: Platform	developer: null
LOPS-5458	Task	Closed	—	LOPS 1.1.1.0 automated testing: WGS	developer: null
LOPS-5344	Task	Closed	—	Run regression for G64 merge to Develop	developer: null
LOPS-5283	Defect	Closed	—	Primer Design assay request message is not being processed successfully	developer: null
LOPS-3936	Task	Closed	—	QC Review Page - Policy and Task Based - replace array_qc_review.js	developer: null
LOPS-2649	Story	Closed	—	Test cfDNA Downstream assay rework points	developer: null

LOPS Sprint 20250113 (34) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5457	Task	Closed	—	LOPS 1.1.1.0 automated testing: WES	developer: null
LOPS-5449	Task	Closed	—	Provide Report for WGS Matching Samples	developer: null
LOPS-5408	Task	Closed	—	Upload example JSON for Methylation Workflow Steps	developer: null
LOPS-5342	Defect	Closed	—	Wes On X: Capture QC Review: Reject - Error when rerunning pools from Histo & BE	developer: null
LOPS-5340	Story	Closed	—	Test only - Inline-QC for Sequencing Steps	developer: null
LOPS-5219	Defect	Closed	—	Incorrect Source Array Type for sgNIPT cfDNA LibAmp to PostLib Quant Transfer Method	developer: null
LOPS-4965	Task	Closed	—	SQE Regression of sgNIPT After Big Merge	developer: null

sgNIPT Sprint 3 (19) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2626	Story	Closed	—	Child gDNA sample template	developer: null

sgNIPT Sprint 16 (32) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5146	Task	Closed	—	Revert basedepartment field on admin Sysuser to null	developer: null
LOPS-5106	Task	Closed	—	Investigation into cfDNA pool quantification calculation	developer: null

sgNIPT Sprint 15 (31) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5027	Defect	Closed	—	Unable to promote results for sgNIPT cfDNA Library Prep A-Tailing array method	developer: null

sgNIPT Sprint 13 (29) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4222	Task	Closed	—	Create a manual test script for sgNIPT gDNA Normalization	developer: null
LOPS-4220	Task	Closed	—	Create a manual test script for sgNIPT gDNA Extraction	developer: null
LOPS-4219	Task	Closed	—	Create a manual test script for Perform sgNIPT gDNA Pre-Extraction	developer: null
LOPS-4218	Task	Closed	—	Create a manual test script for Perform sgNIPT cfDNA Extraction	developer: null
LOPS-4217	Task	Closed	—	Create a manual test script for Perform sgNIPT Plasma Isolation	developer: null
LOPS-4161	Defect	Verified	—	Transfer method sgNIPT cfDNA Capture to Pool Quant cannot be performed due to Level Zone naming conflict	developer: null

sgNIPT Sprint 12 (28) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4593	Defect	Closed	—	"sgNIPT gDNA Library Prep": Test result for the "No" value is not populating	developer: null
LOPS-4235	Sub-task	Closed	—	sgNIPT gDNA Normalization	developer: null
LOPS-4234	Sub-task	Closed	—	sgNIPT gDNA Extraction Quantification	developer: null
LOPS-4227	Story	Verified	—	Create testcases with sgNIPT Assay-00041 Happy Path	developer: null
LOPS-4215	Task	Closed	—	Create a manual test script for Submit Sample and Assign Assay	developer: null
LOPS-4212	Task	Closed	—	Create a manual test script for Creating Racks	developer: null
LOPS-4206	Task	Closed	—	Create lots for testing of reagent validation api	developer: null
LOPS-4202	Task	Closed	—	Create a manual test script for Receiving a consumable lot	developer: null

WESonX Sprint 29 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4773	Task	Closed	—	WES: Support Manual Re-Run for Library Prep Plate from Histopathology	developer: null
LOPS-4771	Task	Closed	—	Run regression testing for M3 build (Wes on X)	developer: null
LOPS-4185	Task	Closed	—	LOPS Maintenance 1 - WES-X sandbox deployment	developer: null

WESonX Sprint 28 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4687	Task	Closed	—	Run regression for M2 - Implementation	developer: null
LOPS-4686	Task	Closed	—	Run regression for hotfix2 - Implementation	developer: null

WESonX Sprint 26 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3973	Story	Verified	—	Assay QC Review: Maintain SAMPLE in POOL Re-Run starting from Hybrid Capture/Sequencing Prep (Test-Only)	developer: null
LOPS-3862	Task	Closed	—	Finalize User List for Production - Reagents and Equipment	developer: null

WESonX Sprint 25 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3863	Task	Closed	—	Finalize User List for Production - Histopathology	developer: null
LOPS-3824	Story	Closed	—	WES: Display Received Samples Ready for Tissue Extraction (Test Only)	developer: null
LOPS-3743	Task	Closed	—	Investigation of missing workitem during fragmentation (Item 18 on the e2E issues gSheet)	developer: null

WESonX Sprint 24 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4774	Task	Closed	—	Remove non-breaking spaces	developer: null
LOPS-3788	Story	Closed	—	Assay QC Review: Sequencing Prep Pool Disposal (Test Only)	developer: null
LOPS-3713	Task	Closed	—	Run Hybrid Capture WF Happy path with sample cancellation	developer: null
LOPS-3712	Task	Closed	—	Run Blood WF Happy path with sample cancellation	developer: null
LOPS-3710	Task	Closed	—	Run Tissue WF Happy path with sample cancellation	developer: null
LOPS-3640	Defect	Closed	—	LOPS worklist unable to be utilized by Biomek	developer: null

WESonX Sprint 23 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3417	Task	Closed	—	E2E Sample Staging: Additional Accessioning & Histology Test Scenarios	developer: null
LOPS-3361	Sub-task	Closed	—	Remove redundant "Sub Type" column from BERR table	developer: null
LOPS-3253	Task	Closed	—	Not Including “Example/Test Data” During Install	developer: null

WESonX Sprint 22 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3419	Task	Closed	—	Wes On X Test Cases and Automation Status Cleanup & Actualization	developer: null
LOPS-3269	Tweak	Closed	—	Missing Sonicators in assorted environments	developer: null
LOPS-2824	Story	Closed	—	Sequencing Prep Re-Run: Support Filler Samples - Test Only	developer: null
LOPS-2394	Defect	Closed	—	Capture Quant - Run Details - Rename Reagent name on Consumable Chooser Dialog	developer: null

WESonX Sprint 21 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2847	Defect	Closed	—	WES on X: Tissue Extraction QC Review - Log exception action - List of possible exceptions has not applicable options fo	developer: null
LOPS-2550	Defect	Closed	—	WES on X: BERR - List of possible exceptions has not applicable options for blood	developer: null
LOPS-2441	Story	Closed	—	Support Blood Exceptions for Assay Workflow	developer: null

WESonX Sprint 20 (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3213	Sub-task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, PIPE-7/8/9/10	developer: null
LOPS-3206	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path	developer: null
LOPS-3188	Task	Closed	—	Creation of the Run 2 - 6 samples for WES-X E2E testing	developer: null
LOPS-3187	Task	Closed	—	Creation of the Run 1 samples for WES-X E2E testing	developer: null
LOPS-3162	Defect	Closed	—	Incorrect sequencing barcodes for Positive Control	developer: null
LOPS-3157	Sub-task	Closed	—	Blood Workflow	developer: null
LOPS-3156	Task	Closed	—	LOPS/WES X UAT Preparation - E2E Demo	developer: null
LOPS-3129	Defect	Closed	—	Optional form fields on WesBloodExtractionRunDetails are disabled from taking user input	developer: null
LOPS-3088	Task	Closed	—	E2E User Documentation - LOPS 1.0.0.0 RC 1, Happy Path	developer: null
LOPS-3087	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 1, Happy Path	developer: null
LOPS-3085	Defect	Closed	—	Capture QC Review: Fail Plate and Re-Run - Samples and controls status doesn't change to "Stored"	developer: null
LOPS-3080	Task	Closed	—	Extend happy path test automation script to support user's e2e scenarios	developer: null
LOPS-3078	Task	Closed	—	Align the LOPS Build Zero deployments for PSPC	developer: null
LOPS-2994	Task	Closed	—	WES: Define Users and Access	developer: null

WESonX Sprint 19 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2788	Defect	Verified	—	Library QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action (Test only)	developer: null
LOPS-2786	Task	Closed	—	Document WES specific e2e script for PSPC integration testing	developer: null
LOPS-2532	Defect	Verified	—	Wes On X: QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action	developer: null
LOPS-2526	Defect	Verified	—	Wes On X - Error Creating Sequencing Manifest (Required String 'reagentlotid' is null or empty)	developer: null
LOPS-2502	Defect	Verified	—	Wes on X: Error running Sequencing Prep step (AssignNextGroupTest.java:56)	developer: null
LOPS-2439	Defect	Verified	—	Wes On X: Capture Quant Run Details - RunDataEntered Param Data Type is incorrect	developer: null
LOPS-2319	Defect	Verified	—	Download WES Normalization Worklist Tissue - generates file without actual values	developer: null
LOPS-2132	Defect	Verified	—	Wes on X: Tissue Extraction: Tube to Rack - Control sample can't be scanned since it lacks a barcode	developer: null
LOPS-2121	Defect	Verified	—	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample	developer: null

WESonX Sprint 18 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2547	Defect	Verified	—	Wes on X: Sequencing - The way Flow Cell ID data is stored is not compatible with platform requirements for Sequencing M	developer: null
LOPS-2546	Defect	Verified	—	Wes on X: Sequencing - The way sequencer data is stored is not compatible with platform requirements for Sequencing Mani	developer: null
LOPS-1725	Defect	Verified	—	Wes On X: BE - Destination Well Locations are stored altered (without zeroes)	developer: null

WESonX - Post Launch (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2140	Defect	Closed	—	Wes on X: Tissue Extraction: Tube to Rack - Tissue Control Barcode is not fully visible for user to review	developer: null

WESonX - Launch (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3105	Defect	Closed	—	Capture QC Review - Re-Quant - Add E-sign for Re-Quant action	developer: null
LOPS-2784	Task	Opened	—	Spike - Investigate "Apply Next Array Method for Testing"	developer: null
LOPS-1906	Defect	Closed	—	QC Batch Sample Type should be required in QC Method	developer: null
LOPS-1754	Defect	Closed	—	Wes On X: Tissue DNA Extraction: Run Details - Instrument and Reagent labels don't match requirements	developer: null

MiSeq Workflows (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9836	Story	Opened	—	GHPv2 on Miseq Tramline	developer: null

LOPS WES/WGS 20260223 (63) (63 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10031	Sub-task	Opened	—	Update kafka configuration for reading topic events.labops.workflow.status.v1	developer: null
LOPS-9762	Task	Ready for Development	—	YALP -LOPS- Send Tissue sample to rework from Histo via API	developer: null
LOPS-9753	Sub-task	Closed	—	[WES] Update outdated test cases: Dmitry	developer: null
LOPS-9748	Sub-task	Closed	—	[WES] Update GIDs for the migrated automated tests in lops-testrunner	developer: null
LOPS-9747	Sub-task	Closed	—	[WES] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	developer: null
LOPS-9746	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Dmitry	developer: null
LOPS-9745	Sub-task	Blocked	—	[WES] Create relationships with requirements for the migrated test cases: Dragana	developer: null
LOPS-9744	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Mila	developer: null
LOPS-9743	Sub-task	Closed	—	[WES] Update outdated test cases: Mila	developer: null
LOPS-9742	Sub-task	Closed	—	[WES] Migrate absent test cases	developer: null
LOPS-9696	Sub-task	Closed	—	[WGS] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	developer: null
LOPS-9691	Sub-task	Closed	—	[WGS] Update GIDs for the migrated automated tests in lops-testrunner	developer: null
LOPS-9668	Sub-task	Closed	—	Ensure that all the test cases with GIDs collisions were migrated	developer: null
LOPS-9659	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dmitry	developer: null
LOPS-9658	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dragana	developer: null
LOPS-9657	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Mila	developer: null
LOPS-9649	Sub-task	Closed	—	[WGS] Update outdated test cases	developer: null
LOPS-9648	Sub-task	Closed	—	[WGS] Migrate absent test cases	developer: null
LOPS-9642	Sub-task	Closed	—	[WES] Verify that all requirements were migrated to the Maintenance project	developer: null
LOPS-9641	Sub-task	Closed	—	[WGS] Verify that all requirements were migrated to the Maintenance project	developer: null
LOPS-9640	Sub-task	Closed	—	[WES] Create the list of test cases that should be migrated/updated	developer: null
LOPS-9639	Sub-task	Closed	—	[WGS] Create the list of test cases that should be migrated/updated	developer: null
LOPS-9598	Task	In Progress	—	Investigate how LOPS communicates with PIPE in other instances (ex. tfMRD, sgNIPT)	developer: null
LOPS-9417	Sub-task	Closed	—	Update LV_Incdt to call the new action when incidents are created	developer: null
LOPS-9415	Sub-task	Closed	—	Action to publish kafka event	developer: null
LOPS-9414	Sub-task	Closed	—	Create a script to create kafka json format	developer: null
LOPS-9413	Sub-task	Closed	—	Update Script To Get Parent Sample Ids for Rework Samples	developer: null
LOPS-9392	Sub-task	Closed	—	Create new transaction type for outbound message	developer: null
LOPS-9391	Sub-task	Closed	—	Add System Instrument For YALP	developer: null
LOPS-9378	Story	SQA Blocked	—	Enable Producing Topic For Rework Samples to be send back to YALP	developer: null
LOPS-9330	Task	Opened	—	WES/WGS 1.0.5.0 - Preliminary E2E environment deployment & testing	developer: null
LOPS-9318	Task	Opened	—	WES/WGS 1.0.5.0 - E2E sample staging	developer: null
LOPS-9317	Task	Opened	—	WES/WGS 1.0.5.0 - E2E environment deployment & testing	developer: null
LOPS-9316	Story	Opened	—	WES/WGS 1.0.5.0 - E2E sample script updates	developer: null
LOPS-9314	Task	Opened	—	WES/WGS 1.0.5.0 - EPS Training Sessions	developer: null
LOPS-9312	Task	Opened	—	WES/WGS 1.0.5.0 - Jama & MasterControl review/sign-off	developer: null
LOPS-9311	Task	Opened	—	Prepare merge release/lops-weswgs-1.0.5.0 to weswgs-master	developer: null
LOPS-9309	Task	Opened	—	WES/WGS 1.0.5.0 - RC environment deployment & testing	developer: null
LOPS-9304	Task	Opened	—	Run flaky automated tests manually - WES/WGS 1.0.5.0	developer: null
LOPS-9303	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Mila	developer: null
LOPS-9302	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Serhii	developer: null
LOPS-9301	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dmitry	developer: null
LOPS-9300	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dragana	developer: null
LOPS-9299	Task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0	developer: null
LOPS-9298	Task	Opened	—	WES/WGS 1.0.5.0 - WGS test case creation	developer: null
LOPS-9297	Task	Opened	—	WES/WGS 1.0.5.0 - WES test case creation	developer: null
LOPS-9296	Task	Opened	—	WES/WGS 1.0.5.0 - Manual test plan creation	developer: null
LOPS-9295	Task	Opened	—	WGS automated regression - WES/WGS 1.0.5.0	developer: null
LOPS-9294	Task	Opened	—	WES automated regression - WES/WGS 1.0.5.0	developer: null
LOPS-9290	Task	Ready for Development	—	BAM Merge Scenario 13 - No BAM merging of cancelled sample runs	developer: null
LOPS-9289	Task	Ready for Development	—	BAM Merge Scenario 12 - Emergency BAM merge deactivation	developer: null
LOPS-9288	Task	Ready for Development	—	BAM Merge Scenario 11 - Duplicate run exclusion	developer: null
LOPS-9287	Task	Ready for Development	—	BAM Merge Scenario 10 - Three runs; last one passes on its own	developer: null
LOPS-9286	Task	Ready for Development	—	BAM Merge Scenario 9 - Three runs with alternating coverage & run failures	developer: null
LOPS-9285	Task	Ready for Development	—	BAM Merge Scenario 8 - Data from a non-coverage failure is not merged	developer: null
LOPS-9284	Task	Ready for Development	—	BAM Merge Scenario 7 - Data from failed sequencing runs is not merged	developer: null
LOPS-9283	Task	Ready for Development	—	BAM Merge Scenario 6 - Data from failed sequencing runs is not sent for BAM merging	developer: null
LOPS-9282	Task	Ready for Development	—	BAM Merge Scenario 5 - No BAM merging across different source samples	developer: null
LOPS-9281	Task	Ready for Development	—	BAM Merge Scenario 4 - WES tissue samples aren't sent for BAM merging	developer: null
LOPS-9280	Task	Ready for Development	—	BAM Merge Scenario 3 - WES blood samples aren't sent for BAM merging	developer: null
LOPS-9279	Task	Ready for Development	—	BAM Merge Scenario 2 - WGS blood samples aren't sent for BAM merging	developer: null
LOPS-9278	Task	Ready for Development	—	BAM Merge Scenario 1 - "Happy Path" BAM merging	developer: null
LOPS-9014	Task	Blocked	—	WES/WGS Jama test case migration	developer: null

LOPS WES/WGS 20260209 (62) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9901	Task	Closed	—	Manual regression testing Mila - WES/WGS 1.0.4.6	developer: null
LOPS-9899	Sub-task	Closed	—	fix test est_TissueExtraction_QcReview_AcceptPartial	developer: null
LOPS-9893	Defect	Closed	—	Re-quant QPCR -> Plate is moved to Historical	developer: null
LOPS-9849	Task	Closed	—	Investigation: Determine lift for LOPS-PIPE Integration	developer: null
LOPS-9681	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.6	developer: null
LOPS-9680	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.6	developer: null
LOPS-9679	Task	Closed	—	WES/WGS 1.0.4.6 - Jama & MasterControl review/sign-off	developer: null
LOPS-9644	Sub-task	Closed	—	Mila - WGS test cases review in terms of potential test automation	developer: null
LOPS-9643	Sub-task	Closed	—	Dragana - WGS test cases review in terms of potential test automation	developer: null

LOPS WES/WGS 20260126 (61) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9715	Task	Closed	—	Review Initial Integration Tests for YALP–LOPS Histo and Research Configuration Handling	developer: null
LOPS-9418	Task	Closed	—	Slides are stuck in Histopathology, on Dissection step	developer: null
LOPS-9061	Task	Closed	—	Investigation: lops-weswgs-1.0.4.1 Performance Issues	developer: null
LOPS-8506	Task	Closed	—	Testing support for CCR-592	developer: null

LOPS WES/WGS 20260112 (60) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9144	Task	Opened	—	Investigate Kafka message consumption	developer: null
LOPS-8708	Task	Opened	—	Evaluate and re-configure users with LabOps Manager and LabOps Operator jobtypes in Production	developer: null

LOPS WES/WGS 20251229 (59) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9508	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.4 - Mila	developer: null

LOPS WES/WGS 20251215 (58) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9447	Task	Closed	—	Regression testing for JAMA upgrade	developer: null
LOPS-9310	Task	Closed	—	WES/WGS 1.0.5.0 - Day-Before environment deployment & testing	developer: null
LOPS-9272	Task	Closed	—	WES/WGS 1.0.4.4 - Jama & MasterControl review/sign-off	developer: null
LOPS-9270	Task	Closed	—	WES/WGS 1.0.4.4 - Day-Before environment deployment & testing	developer: null
LOPS-9057	Task	Closed	—	LOPS WES/WGS Jira Project switchover	developer: null

LOPS WES/WGS 20251201 (57) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9476	Task	Closed	—	Cherry Pick and merge ECR work into project branch	developer: null
LOPS-9274	Task	Closed	—	Run flaky automated tests manually - WES/WGS 1.0.4.4	developer: null
LOPS-9273	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.4	developer: null
LOPS-9268	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.4	developer: null

LOPS WES/WGS 20251117 (56) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9180	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Mila	developer: null
LOPS-9179	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Serhii	developer: null
LOPS-9097	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.3	developer: null
LOPS-9095	Task	Closed	—	WES/WGS 1.0.4.3 - Jama & MasterControl review/sign-off	developer: null

LOPS WES/WGS 20251103 (55) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8912	Task	Closed	—	Improve test automation to Support e-Signatures in Histopathology workflow	developer: null
LOPS-8893	Task	Closed	—	Fix TubeVerificationApi/TubeVerification with verifying of QC batch's disappearance on WES/WGS Tube Verification‎ page	developer: null
LOPS-8827	Task	Closed	—	Add platform test for StudyId	developer: null

LOPS WES/WGS 20251020 (54) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8989	Task	Closed	—	Fix WGS regression tests	developer: null
LOPS-8988	Task	Closed	—	Fix WES regression tests	developer: null
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	developer: null

LOPS WES/WGS 20251006 (53) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8869	Task	Closed	—	Update Tissue sample extraction QC thresholds	developer: null
LOPS-8833	Task	Closed	—	Improve Quant Concentration autotests	developer: null
LOPS-8702	Task	Closed	—	Update auto code for creating Tissue slides at Accessioning step	developer: null
LOPS-8664	Task	Closed	—	Fix Platform tests	developer: null

LOPS WES/WGS 20250922 (52) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8738	Task	Closed	—	WES automated tests improvements after release 1.0.3.0	developer: null
LOPS-8692	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review	developer: null
LOPS-8476	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing In Progress step	developer: null
LOPS-8475	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing step	developer: null
LOPS-8474	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing Prep step	developer: null
LOPS-8473	Task	Closed	—	WGS - GUIDE - Verify that user can complete WGS Pool Prep step	developer: null
LOPS-8472	Task	Closed	—	WGS - GUIDE - Verify that user can upload Consolidation Rundata	developer: null
LOPS-8279	Task	Closed	—	WES/WGS 1.0.3.0 - Jama & manual QA review/sign-off	developer: null
LOPS-8269	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Serhii	developer: null
LOPS-8268	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Dmitry	developer: null
LOPS-8267	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.- - Dragana	developer: null
LOPS-8266	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Mila	developer: null
LOPS-8265	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0	developer: null
LOPS-8261	Task	Closed	—	WGS automated regression - WES/WGS 1.0.3.0	developer: null
LOPS-8260	Task	Closed	—	WES automated regression - WES/WGS 1.0.3.0	developer: null

LOPS WES/WGS 20250908 (51) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8525	Task	Closed	—	WES/WGS 1.0.3.0 - Deployment latest versions of Kafka and Samrep on the testing environment	developer: null
LOPS-8471	Task	Closed	—	WGS - GUIDE - Verify that user can Download Consolidation Worklist	developer: null
LOPS-8470	Task	Closed	—	WesOnX - GUIDE - Verify that user can 'Accept All' at Capture QC Review step	developer: null
LOPS-8469	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Results	developer: null
LOPS-8468	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Run Details	developer: null
LOPS-8467	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Capture Enrichment Rundata	developer: null
LOPS-8466	Task	Closed	—	WesOnX - GUIDE - Verify that user can Download Capture Enrichment Worklist	developer: null
LOPS-8465	Task	Closed	—	WesOnX - GUIDE - Verify that user can perform Hyb ATC Run Details	developer: null
LOPS-8464	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Pre-Capture Pooling Rundata	developer: null
LOPS-8463	Task	Closed	—	WesOnX - GUIDE - Verify that user can download Pre-Capture Pooling Worklist	developer: null
LOPS-8275	Task	Closed	—	WES/WGS 1.0.3.0 - PSPC environment deployment	developer: null
LOPS-8262	Task	Closed	—	WES/WGS 1.0.3.0 - Manual test plan creation	developer: null
LOPS-8246	Task	Closed	—	WES - GUIDE - Verify that user can perform Library Quant Results Rundata	developer: null

LOPS WES/WGS 20250825 (50) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8378	Defect	Verified	—	Button name "Hybrid Capture Run Details"	developer: null
LOPS-8306	Defect	Closed	—	Library Prep- Fragmentation step does not provide page for inputting instruments	developer: null
LOPS-8264	Task	Closed	—	WES/WGS 1.0.3.0 - WGS test case creation	developer: null
LOPS-8263	Task	Closed	—	WES/WGS 1.0.3.0 - WES test case creation	developer: null
LOPS-8248	Task	Closed	—	WesOnX/WGS - GUIDE - Create TissueDnaReviewApi	developer: null
LOPS-8205	Defect	Closed	—	Filler gDNA samples are not displayed on 'WES/WGS Blood Extraction Samples' page	developer: null
LOPS-8182	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Rack to Plate step	developer: null
LOPS-8181	Task	Closed	—	WesOnX - GUIDE - Verify that user can create WES Blood Filler Sample	developer: null
LOPS-8180	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Extraction step	developer: null
LOPS-8179	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Review page	developer: null
LOPS-8132	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0-Mila	developer: null
LOPS-8045	Task	Closed	—	WES/WGS 1.0.2.0 - Jama & DotCompliance sign-off	developer: null
LOPS-8020	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0	developer: null

LOPS WES/WGS 20250811 (49) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8023	Task	Closed	—	WES/WGS 1.0.2.0 - Manual test plan creation	developer: null
LOPS-8022	Task	Closed	—	WES/WGS 1.0.2.0 - WGS test case creation	developer: null
LOPS-8021	Task	Closed	—	WES/WGS 1.0.2.0 - WES test case creation	developer: null
LOPS-8018	Task	Closed	—	WGS automated regression - WES/WGS 1.0.2.0	developer: null
LOPS-8017	Task	Closed	—	WES automated regression - WES/WGS 1.0.2.0	developer: null
LOPS-7957	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.2	developer: null
LOPS-7956	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.2	developer: null

LOPS WES/WGS 20250728 (48) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7880	Defect	Verified	—	Wrong 'Histo Sample Receipt' page name	developer: null
LOPS-7864	Defect	Closed	—	Fail & Re-Extract sample issue	developer: null
LOPS-7830	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Dragana	developer: null
LOPS-7829	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Mila	developer: null
LOPS-7828	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Serhii	developer: null
LOPS-7745	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.1.0	developer: null
LOPS-7744	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.0	developer: null
LOPS-7743	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.0	developer: null
LOPS-7482	Story	Closed	—	Histology: WGS Tissue Return Page	developer: null
LOPS-2449	Story	Closed	—	Re-batching implementation	developer: null
LOPS-2284	Story	Closed	—	Re-batching for normalization	developer: null

LOPS Production Support Issues (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9791	Defect	In Grooming	—	Hide functionality to Add source sample to existing Assay as part of EPS Admin Role	developer: null
LOPS-9777	Task	Opened	—	Slow load times for the "Select Tissue Samples" pages; anomalous "Run Number" values for WGS	developer: null
LOPS-9766	Defect	Opened	—	Update transaction type ITT000013	developer: null
LOPS-9751	Story	Opened	—	Implementation of a run-/batch-level “minimum patient samples passed” threshold for Assay QC	developer: null
LOPS-9709	Task	Opened	—	Prevent Loading of Sample(s) on a Complete Plate	developer: null
LOPS-9688	Defect	Opened	—	Assay attributes trim value or warning validation for extra spaces and new lines	developer: null
LOPS-9684	Task	Opened	—	Investigation: SEQ plates unexpectedly not moving to "WES Sequencing"	developer: null
LOPS-9625	Task	Opened	—	Allow Administrator role to update status to Selected, RETAIN, or ARCHIVE	developer: null
LOPS-9532	Defect	Opened	—	LOPS showing "Overflow" as a value for concentration. Prevents uploading of Lib Quant Results File	developer: null
LOPS-8515	Tweak	Opened	—	Allow Lab Managers or Supervisors to update Plate barcodes.	developer: null
LOPS-8445	Defect	Closed	—	Prevent WES/WGS Primer Designs from being created if their associated Blood or Tissue Assay have a failed disposition	developer: null
LOPS-8174	Story	Opened	—	Removal of the WES flowcell uniqueness check	developer: null
LOPS-8173	Story	Opened	—	Stop storing unnecessary sequencing run fields in LOPS	developer: null
LOPS-8172	Story	Opened	—	Removal of the flowcell instrument & side check	developer: null
LOPS-8169	Story	Opened	—	Prevent duplicate SELECT samples from being registered in LOPS	developer: null

LOPS WH 20260601 (70) (M24) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9915	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 44 with M19.	developer: null
LOPS-9914	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 43 with M19.	developer: null
LOPS-9811	Task	Opened	—	gDNA pool Quant runlog not accepted by LOPS	developer: null
LOPS-9513	Task	Opened	—	Spike - Investigate LOPS AI Assistant for Support and General Questions	developer: null
LOPS-9365	Story	Opened	—	Update LRPCR Primer reagent container amounts and LRPCR Barcoding AM decrement amounts	developer: null

LOPS WH 20260223 (63) (M17) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10051	Sub-task	Closed	—	Dev Testing - CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	developer: null
LOPS-9854	Task	Ready for Development	—	Data request: Request Run details for the LRPCR runs	developer: null

GHPv2 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	developer: null
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	developer: null
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	developer: null
LOPS-9541	Story	Opened	—	PD Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	developer: null
LOPS-9540	Story	Opened	—	Convert LOPS->PD Pipeline Launch Message from Kafka to REST API	developer: null
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	developer: null

G64onLOPS Sprint 9 (24) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3436	Sub-task	Closed	—	Review WES Workflows	developer: null
LOPS-3431	Sub-task	Closed	—	Review WES workflows	developer: null
LOPS-3365	Sub-task	Closed	—	Review WES workflow in local	developer: null
LOPS-3363	Sub-task	Closed	—	Review Wes workflows in local	developer: null
LOPS-3358	Sub-task	Closed	—	Review Wes blood workflow in local	developer: null
LOPS-3355	Task	Closed	—	WES-X workflow practice for the G64 team	developer: null

G64onLOPS Sprint 8 (23) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3077	Story	Closed	—	Validate controls for WGS Normalization - Test Only	developer: null

G64onLOPS Sprint 4 (19) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3239	Sub-task	Closed	—	Generate Blood Extraction Quant Worklist trows error: Required property 'worklistdir' not found in property list	developer: null

G64onLOPS Sprint 17 (32) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5189	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: Platform	developer: null
LOPS-5188	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WGS	developer: null
LOPS-5187	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WES	developer: null
LOPS-5185	Task	Closed	—	Final automated testing for the LOPS 1.1.0.0 release candidate	developer: null
LOPS-5170	Story	Closed	—	WES/WGS: Access for Pathologist User (Test Only)	developer: null
LOPS-5161	Story	Closed	—	WES/WGS: Access for Histology User (Test Only)	developer: null
LOPS-5073	Task	Closed	—	G64 Regression Testing - Dmitry	developer: null

G64onLOPS Sprint 16 (31) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5120	Task	Closed	—	Re-merging of LOPS-4126 into the G64 launch branch	developer: null
LOPS-5117	Tweak	Closed	—	WGS: Access for Lab Ops User (Test Only)	developer: null
LOPS-5116	Story	Closed	—	WGS: Access for Extraction User (Test Only)	developer: null
LOPS-5094	Defect	Closed	—	12/11/2024 issues in PSPC testing	developer: null
LOPS-2281	Story	Closed	—	WGS Assay Cancellation - Test only	developer: null
LOPS-1970	Story	Closed	—	Rework from Assay QC	developer: null
LOPS-1969	Story	Closed	—	(Test only) Support Exception from Assay QC Review	developer: null
LOPS-1967	Story	Closed	—	Retrigger WGS pipeline - Test only	developer: null

G64onLOPS Sprint 15 (30) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4948	Defect	Closed	—	The DestConcentration value has fewer digits after uploading rundata file	developer: null
LOPS-4882	Story	Closed	—	Test Only - Promote Results to Source Array	developer: null

G64onLOPS Sprint 14 (29) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4836	Task	Closed	—	Deployment issue on develop: "Schema being registered is incompatible with an earlier schema for subject "events.assay-r	developer: null
LOPS-4788	Story	Closed	—	Test Only - WGS tissue must have PRO0022275 instead of PRO0014905	developer: null
LOPS-4762	Task	Closed	—	Regressin Run on MR for Launch into develop	developer: null

G64onLOPS Sprint 12 (27) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3906	Story	Closed	—	qPCR Results Review	developer: null
LOPS-3683	Story	Closed	—	Start qPCR Plate Setup - Blood, Test only	developer: null

G64onLOPS Sprint 11 (26) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3653	Story	Closed	—	Re-verification of the Blood Extraction workflow - Test-Only	developer: null

G64onLOPS Sprint 10 (25) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3654	Story	Closed	—	Re-verification of the Pre-Amp workflow - Test-Only	developer: null

LOPS Sprint 32 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7162	Task	Opened	—	Provide SELECT Access to LabVantage Views for RO Database Role	developer: null
LOPS-5081	Defect	Closed	—	Assay QC Failing	developer: null
LOPS-5077	Task	Closed	—	G64 Regression Testing - Serhii	developer: null
LOPS-5071	Task	Closed	—	G64 Regression Testing - Shweta	developer: null
LOPS-5070	Task	Closed	—	G64 Regression Testing - Mike N.	developer: null
LOPS-4900	Task	Closed	—	Register v2 of Sequencing Run Complete message	developer: null

LOPS Sprint 31 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7155	Task	Closed	—	Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in sgNIPT LOPS Prod	developer: null
LOPS-5078	Task	Closed	—	G64 Regression Testing - Nikolai	developer: null
LOPS-5074	Task	Closed	—	G64 Regression Testing - Oksana	developer: null
LOPS-5069	Task	Closed	—	G64 Regression Testing - Rufat	developer: null
LOPS-4984	Task	Closed	—	GHP E2E Run1: Missing 21 LOPS_ASSAY_IDs in ASSAY_QC	developer: null
LOPS-4947	Task	Closed	—	Run platform regression for M4	developer: null
LOPS-4930	Task	Closed	—	GHP E2E Run 1: SOURCE_WORKITEM_ID is the same for Ext and LibPrep	developer: null
LOPS-4891	Task	Closed	—	Incorrect Resultcode for Tissue Pre-SD and SD Samples	developer: null
LOPS-4003	Task	Closed	—	G64 - Sample Disposition Status	developer: null

LOPS Sprint 22 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7152	Task	Closed	—	Finish Configuration of RDS SSL for TCPS Secure Connection	developer: null
LOPS-3442	Task	Closed	—	Map steps between LV1 and LOPS for the IT analytics dashboard. Sequencing	developer: null
LOPS-3441	Task	Closed	—	Map step names between LV1 and LOPS for the IT analytics dashboard. Histo	developer: null
LOPS-3163	Task	Closed	—	Strategy for getting the needed contents of patch-init into production	developer: null

LOPS Sprint 26 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7151	Sub-task	Opened	—	Remove DB Schema Name From Intf Setup SQL Script	developer: null
LOPS-7150	Task	Closed	—	Create new Intf DB User and Set Permissions in LV Prod	developer: null
LOPS-4011	Task	Closed	—	ReagentSync: configure prod env	developer: null
LOPS-3987	Task	Closed	—	2 different EXT quants for the same casefile and TDNA plate	developer: null
LOPS-3926	Task	Closed	—	Reagent Sync: switch log format to json	developer: null
LOPS-3904	Task	Closed	—	Investigate if an Assay Complete message was sent for 01910adf-558c-7cc9-a256-b7329e67c72f in wes e2e env	developer: null
LOPS-3845	Task	Closed	—	Link original and re-sequenced samples to the same patient	developer: null

LOPS Sprint 23 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7149	Task	Closed	—	Add RDS Certification File to Intf Service	developer: null
LOPS-1995	Task	Closed	—	Create NtrException Constructor with Exception	developer: null

LOPS Sprint 24 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7148	Task	Closed	—	Add RDS Certification File to Reagent Sync App	developer: null
LOPS-3742	Task	Closed	—	Need Post Extractions and Post Library Prep concentrations values for Controls	developer: null
LOPS-3719	Task	Closed	—	LOPS 1.0.0.0 RC 4 - Cherry picking of launch tickets, Round 2	developer: null
LOPS-3718	Task	Closed	—	LV.LOPS.ASSAY table ASSAY_STATUS field populated incorrectly for lab QC failing samples	developer: null
LOPS-3679	Task	Closed	—	Should concordance metrics also be associated with matched normal sample?	developer: null
LOPS-3676	Task	Closed	—	Link LOPS_SAMPLE_ID and LOPS_ASSAY_ID outside of ASSAY_QC table	developer: null
LOPS-3673	Task	Closed	—	LOPS table ASSAY_APPROVAL: need date that a sample was dispositioned, user	developer: null
LOPS-3659	Task	Closed	—	Map tissue barcode, casefileid given primer design pipeline launch request ID or assay request ID in LOPS	developer: null
LOPS-3422	Task	Closed	—	Update information for IT dashboard	developer: null
LOPS-1890	Task	Closed	—	EQMT Management SOP Update	developer: null

LOPS Sprint 25 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7147	Task	Ready for Development	—	Apply Missing Oracle Minor Version Fixes	developer: null
LOPS-3765	Task	Closed	—	Validate the sample query provided to retrieve the starttime for histopathology steps	developer: null
LOPS-3763	Task	Closed	—	Validate the sample query provided to retrieve createdt	developer: null
LOPS-3715	Task	Closed	—	Configure Reagent sync in e2e env with RDS and MSK for sanity testing	developer: null
LOPS-3476	Tweak	Closed	—	Create a method for assigning approval type to all consumables	developer: null
LOPS-1368	Tweak	Closed	—	Create a method for migrating Reagents lot data from LV1.0 to LOPS	developer: null

LOPS Sprint 28 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7146	Task	Closed	—	Export all users from LOPS PROD and import into sgNIPT LOPS DB	developer: null
LOPS-4752	Defect	Closed	—	2 Pipe Job ID and 2 Pipe Job Status records created after Pipeline Info message is received and processed successfully	developer: null
LOPS-4705	Task	Closed	—	Assay QC metrics - generate LOPS workflow status event in G64 AV env	developer: null
LOPS-4688	Task	Closed	—	Run regression for M2	developer: null
LOPS-4685	Task	Closed	—	Run regression for hotfix2	developer: null
LOPS-4632	Task	Closed	—	Run WES regression for launch	developer: null
LOPS-4631	Task	Closed	—	Run WES regression for launch	developer: null
LOPS-4629	Task	Closed	—	Run WES regression for launch	developer: null
LOPS-4628	Task	Closed	—	Run WES regression for launch	developer: null
LOPS-4555	Defect	Closed	—	SEQ Manifest failing with ARJUNA016053 error	developer: null
LOPS-4551	Task	Closed	—	Assess whether M1 branch supports ARM messages produced against v 1.18	developer: null
LOPS-4539	Task	Closed	—	Provide LOPS Access to Ryan Casillo and Amelaine Almacen	developer: null
LOPS-4238	Task	Closed	—	Provide LOPS Access to ENG resources	developer: null
LOPS-4197	Sub-task	Closed	—	Include labvantagedoc.war to labvantagehome_installed.zip v LV8.8.0 (LOPS project)	developer: null
LOPS-3775	Task	Closed	—	Run regression test for WES	developer: null
LOPS-3774	Task	Closed	—	Run regression test for WES	developer: null
LOPS-3773	Task	Closed	—	Run regression test for WES	developer: null

LOPS Sprint 20241230 (33) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5326	Task	Closed	—	Final automated testing for the LOPS 1.1.0.1 release candidate	developer: null
LOPS-5279	Task	Closed	—	Fix memory killed error on python script to export db data to s3	developer: null
LOPS-5259	Task	Closed	—	Merge M3 items to Production in Jama	developer: null
LOPS-5208	Task	Closed	—	Create a gitlab project to maintain labworkflows datamesh code assets	developer: null
LOPS-5075	Task	Closed	—	G64 Regression Testing - Petar	developer: null
LOPS-5009	Task	Closed	—	G64 Launch Build 1 - Demo deployment	developer: null
LOPS-5007	Task	Closed	—	G64 Launch Build 1 - PSPC deployment	developer: null
LOPS-4612	Story	Closed	—	gDNA extraction quantification worklist generation	developer: null

LOPS Sprint 30 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4950	Task	Closed	—	Update helm configuration to fix development LabVantage db persistence	developer: null
LOPS-4866	Task	Closed	—	Investigate why some samples in Production env are showing up as part of the San Carlos depts	developer: null

LOPS Sprint 29 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4804	Task	Closed	—	Corrections needed for reagentclass for WES controls and primers in Production	developer: null
LOPS-4794	Task	Closed	—	ReagentSync: NPE in the connector filter	developer: null
LOPS-4792	Task	Opened	—	QC Batch List Page: Remove 'Racks Ready for Tube Verification' Filter in Production	developer: null
LOPS-4772	Task	Closed	—	Run platform regression testing for M3 build	developer: null
LOPS-4729	Task	Closed	—	G64 - Updates for PD_ASSAY_APPROVAL	developer: null
LOPS-4630	Task	Closed	—	Run WES regression for launch	developer: null
LOPS-4610	Task	Closed	—	Create a branch for sgNIPT phase 2	developer: null
LOPS-4089	Task	Closed	—	Run regression test to verify k8s is working correctly with LOPS. SQE part	developer: null
LOPS-3229	Task	Closed	—	Create EPS Runbook for LOPS	developer: null
LOPS-3227	Task	Closed	—	Disable Accessioning Message, Sample Management Event Message, and Deprecate the Jama Documentation	developer: null

LOPS tfMRD Sprint 2 (28) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4209	Task	Closed	—	JQ - Design and support tasks (sprint 2)	developer: null

tfMRD Sprint 1 (LOPS 27) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4208	Task	Closed	—	JQ - Design and support tasks (sprint 1)	developer: null

LOPS Sprint 27 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4162	Task	Closed	—	Create new branch for M1	developer: null
LOPS-2505	Task	Closed	—	Set up connection to Pipeline's Rest API for pipeline integration	developer: null

LOPS Sprint 21 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3066	Tweak	Verified	—	Commit Reagent array method to repository	developer: null
LOPS-2054	Task	Closed	—	Add and configure all Valid Assay codes	developer: null

LOPS Sprint 18 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	developer: null
LOPS-2163	Task	Closed	—	Create a read-only database account for QA environments	developer: null

LOPS Sprint 14 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2128	Defect	Verified	—	Pipe only seq manifest is not created: No Assay Template Workitems found	developer: null
LOPS-2030	Task	Closed	—	Configure additional test controls for WES/X pipeline at integration env	developer: null
LOPS-2029	Task	Closed	—	Configure additional test controls for WES/X pipeline at staging env	developer: null
LOPS-1679	Task	Closed	—	Platform part. Create hybrid assay templates for a new build deployment for the system test (SW e2e)	developer: null
LOPS-1169	Task	Closed	—	Investigation: Unable to view audit trail for assay instance records	developer: null
LOPS-697	Task	Closed	—	Provision Oracle Enterprise License	developer: null

LOPS Sprint 13 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1925	Defect	Closed	—	Assay Templates do not have a way to indicate if an assay template is for filler samples	developer: null
LOPS-1761	Task	Closed	—	Change configs for lwstaging-11 to point to the kafka deployed from Kubernetes	developer: null
LOPS-1751	Task	Closed	—	Record all Histopathology steps	developer: null
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	developer: null

LOPS Sprint 19 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1900	Task	Closed	—	General support PSPC testing. Sprint 19	developer: null
LOPS-1899	Task	Closed	—	General support PSPC testing. Sprint 18	developer: null

LOPS Sprint 17 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1898	Task	Closed	—	General support PSPC testing. Sprint 17	developer: null

LOPS Sprint 16 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1897	Task	Closed	—	General support PSPC testing. Sprint 16	developer: null
LOPS-1657	Task	Closed	—	Spike - Investigate how to implement the ability to scan samples into a rack	developer: null

LOPS Sprint 11 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1613	Defect	Ready for SQA	—	Fix errors in test methods	developer: null
LOPS-1587	Task	Closed	—	LOPS - assay status changes to "completed" instead of "in progress"	developer: null
LOPS-1505	Task	Closed	—	LOPS does not generate WES extraction kafka message for EDTA samples (events.labops.workflow.status.v1)	developer: null

LOPS Sprint 09 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1347	Task	Closed	—	SW e2e support	developer: null
LOPS-1299	Task	Closed	—	KEH k8s configuration for staging-572	developer: null
LOPS-862	Task	Closed	—	Spike - Create design for how to streamline retesting	developer: null
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	developer: null
LOPS-580	Sub-task	Closed	—	Spike - Create design plan for how we will be able to record QC metrics from pipelines on standards and controls on arra	developer: null
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	developer: null

LOPS Sprint 08 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1296	Task	Closed	—	Pipeline - LOPS integration: results investigation	developer: null
LOPS-1162	Task	Closed	—	LOPS jama wes on x test cases reorg for the systems testing team	developer: null
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	developer: null

LOPS Sprint 07 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1116	Task	Closed	—	Deploy qa-86 kafka-event-hub to k8s	developer: null
LOPS-1076	Task	Closed	—	Confirm all topic names for transaction types have ".v1" appended	developer: null
LOPS-1056	Task	Closed	—	Assess if LV patch resolves the bug that prevents auto-approvals for run and batch level datasets	developer: null

LOPS Sprint 06 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-1046	Task	Closed	—	E2E Dry Run Testing	developer: null

LOPS Sprint 15 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	developer: null
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	developer: null
LOPS-1025	Story	Closed	—	Gitlab Work	developer: null
LOPS-918	Task	Closed	—	Create the functionality for IMT system level parameters	developer: null
LOPS-799	Task	Closed	—	Review and Update all Design Documents and Specifications	developer: null

LOPS Sprint 05 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-942	Sub-task	Closed	—	WES Pre-Capture Pooling Param List - 'Sample Type' parameter is missing	developer: null
LOPS-916	Task	Closed	—	Fix broken web image in LOPS-MVP-5 branch	developer: null

LOPS Sprint 12 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-894	Task	Closed	—	Performance Investigation - Accessioning Message Processing	developer: null

LOPS Sprint 03 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-813	Task	Closed	—	Prepare for and execute LOPS UX demo for Lab Ops	developer: null
LOPS-785	Task	Closed	—	Test LIMS - LOPS integration - accessioning workflow for samples	developer: null

LOPS Sprint 02 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-793	Task	Closed	—	Integration tracking with Signatera team	developer: null
LOPS-758	Task	Closed	—	Review and update Automation status for test cases	developer: null
LOPS-682	Task	Closed	—	Spike - In-line QC reagent qualification	developer: null
LOPS-370	Sub-task	Closed	—	Matt + Chris: Confirm whether we can do short-term fix now until larger rework is done for IMT	developer: null

LOPS Sprint 01 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-744	Task	Closed	—	Update Sample Management Event Schema in Kafka	developer: null
LOPS-735	Task	Closed	—	Create Prototype for WES on X Extraction Quant	developer: null
LOPS-721	Task	Closed	—	SPIKE - Investigate and draft the documentation for a method for deploying the reagent sync objects	developer: null

No Sprint Assigned (50 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9374	Sub-task	Closed	—	Dev Testing - Update Biobanking worklist query to allow full loading of 96-tube rack	developer: null
LOPS-9218	Sub-task	Closed	—	Implement QIP sample import processor	developer: null
LOPS-9217	Sub-task	Closed	—	Import sample csv file task and processor	developer: null
LOPS-9171	Task	Closed	—	PSPC LOPS Test Automation script: ASSAY-43 failed on ProcessResultAction	developer: null
LOPS-9116	Sub-task	Closed	—	Dev Testing - Resolve Assay Request message processing failure when Exception subfields are present	developer: null
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	developer: null
LOPS-8929	Defect	Closed	—	cfDNA Pool Quant QC Review is not Releasing Pool Quant Results	developer: null
LOPS-8914	Sub-task	Closed	—	Assist automation team in runlog integration service testing	developer: null
LOPS-8707	Sub-task	Closed	—	Dev Testing - Update Instrument type on Array Method for sgNIPT cfDNA Post Ligation Purification	developer: null
LOPS-8663	Sub-task	Closed	—	Dev Testing - Restrict "take custody" to just lab managers/supervisors	developer: null
LOPS-8637	Task	Closed	—	LRPCR Guided workflows / validations - Kathy	developer: null
LOPS-8609	Sub-task	Closed	—	(LV1.0) Create new reagents_lops_user LV account as clone of intf_lops_user	developer: null
LOPS-8608	Sub-task	Closed	—	(wes/wgs) Create new reagents_lops_user LV account as clone of intf_lops_user	developer: null
LOPS-8343	Sub-task	Closed	—	Test Automation Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode vali	developer: null
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	developer: null
LOPS-8228	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can download Extraction Quant Worklist	developer: null
LOPS-7933	Task	Closed	—	tfMRD - Add Merge Request Bot to GitLab LabWorkflows repo	developer: null
LOPS-7736	Defect	Closed	—	Creating reagents mix has error: Failed to adjust container amount. Check the use amount and units.	developer: null
LOPS-7439	Defect	Closed	—	QC Review page is not loading	developer: null
LOPS-7364	Task	Closed	—	Add illumina sequencers master data	developer: null
LOPS-7288	Task	Closed	—	SgNIPT Automated Regression for 1.0.0.0	developer: null
LOPS-7128	Task	Closed	—	Assess passwords for Prod and Non-Prod integration/api users	developer: null
LOPS-7089	Task	Closed	—	Disable the OOTB stats logging in LOPS	developer: null
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	developer: null
LOPS-7053	Story	Closed	—	Separate LOPS Integration - Pipe Sequencing Manifest	developer: null
LOPS-7050	Story	Closed	—	New Kafka ARM consumer group for sgNIPT Prod	developer: null
LOPS-7049	Task	Closed	—	Spike: When to fork the separate repo	developer: null
LOPS-7048	Task	Closed	—	Spike: Branch and Merge Strategy between Products	developer: null
LOPS-6997	Task	Closed	—	Test Only: Assay 44 in new sgNIPT prod instance	developer: null
LOPS-6929	Task	Closed	—	Samples that have not yet been received should not appear on plasma iso worklist	developer: null
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	developer: null
LOPS-6918	Task	Closed	—	LabVantage licenses for separate LOPS instances	developer: null
LOPS-6699	Defect	Closed	—	Gene Specific Config missing : sgNIPT AM - sgNIPT gDNA GENE LR-PCR Barcoding - 1	developer: null
LOPS-6655	Task	Closed	—	Import reagents from 1.0 for launch	developer: null
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	developer: null
LOPS-6476	Task	Closed	—	Platform Automated Regression	developer: null
LOPS-6474	Task	Closed	—	Validate all new reagents have been created (or will be deployed) in production	developer: null
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	developer: null
LOPS-6393	Task	Closed	—	Updated list of WES / WGS manual test cases	developer: null
LOPS-6358	Task	Closed	—	Add Amy and Elyssa to Prod	developer: null
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	developer: null
LOPS-6330	Task	Closed	—	sgNIPT Automated Regression	developer: null
LOPS-6085	Sub-task	Closed	—	LOPS- 4410 - Update the specifications based on latest changes	developer: null
LOPS-5854	Sub-task	Closed	—	5 - Create Spec	developer: null
LOPS-5853	Sub-task	Closed	—	4 - Create MR	developer: null
LOPS-5852	Sub-task	Closed	—	3 - Implement	developer: null
LOPS-5851	Sub-task	Closed	—	2 - Create Branch	developer: null
LOPS-5850	Sub-task	Closed	—	1 - Link Requirements	developer: null
LOPS-5365	Sub-task	Closed	—	Evaluate test automation scripts for k8s build on integration env	developer: null
LOPS-5284	Sub-task	Closed	—	Evaluate test automation scripts for K8s on Staging-100	developer: null

Missing QA Assignee

CRITICAL 98.5% pass rate (41 violations / 2787 applicable)

Applicable ticket types should have a QA assignee. Tasks do NOT require QA.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10044	Story	Development Blocked	Valeria Vargas	[new scope] Manifest DTO and Conversion Service	qa_assignee: null
LOPS-9758	Defect	Code Review	Valeria Vargas	Assay Cancellation request not being process in LOPS	qa_assignee: null
LOPS-9409	Story	Ready for SQA	Valeria Vargas	IUO	qa_assignee: null
LOPS-9408	Story	Ready for SQA	Valeria Vargas	Cancer Types in LOPS	qa_assignee: null

LOPS-tfMRD-59-20251229 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9423	Defect	Closed	Hani Yakan	Unable to download hybridization worklist	qa_assignee: null
LOPS-7549	Story	Closed	Jonathan Quinn	Manual Recovery 1 Options for Transfer	qa_assignee: null

LOPS-tfMRD-52-20250922 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8099	Defect	Closed	Mikhail Terpugov	ProcessRunCompleteMessage failure in Shakedown	qa_assignee: null

LOPS-tfMRD-47-20250713 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7545	Defect	Closed	Ron Enson	tfMRD Cannot See trackitems during lot master mix creation	qa_assignee: null

LOPS-tfMRD-46-20250630 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7539	Tweak	Opened	—	Update SourcePosition to SourceWell header in Worklists, Runlogs and Paramete	qa_assignee: null
LOPS-7101	Story	Verified	Jonathan Quinn	tfMRD Sidebar Creation	qa_assignee: null

LOPS Sprint 20250602 (44) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6278	Story	Verified	Kevin Detweiler	WES/GHP: Standardize Tissue DNA Extraction Task: Update 'Input/Output Plate Type'	qa_assignee: null
LOPS-6242	Story	Verified	Dennis Lin	WES: Sequencing: Support 'Sequencing' Run Details Task	qa_assignee: null
LOPS-5819	Tweak	Closed	Ron Enson	Update Array Transfer Method for duplicate reads for Post-Pooling Quantification	qa_assignee: null
LOPS-5066	Story	Opened	Isaac Vargas	Query what is currently stored inside Verso	qa_assignee: null

LOPS Sprint 20250407 (40) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5905	Story	In Grooming	Dennis Lin	WES: QC Batch List Page > WES Actions: Validate Task per Workflow Step for QC Batch	qa_assignee: null
LOPS-5717	Story	Ready for Development	Abdul Aziz	Blood Extraction: Validate Blood Extraction DNA Plate Barcode	qa_assignee: null
LOPS-5429	Tweak	Closed	—	Updates for Array Method for Post-Pooling Quantification Reading	qa_assignee: null
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	qa_assignee: null
LOPS-4025	Defect	Ready for Development	—	Error message when clicking 'Create Consumable Arrays' button on the Add Consumable Lot page	qa_assignee: null
LOPS-2903	Story	Development Blocked	Hani Yakan	Extraction QC Review: Approve Plate > NOT Re-Queue Failed Blood Filler Samples for Blood Extraction (Test Only)	qa_assignee: null

LOPS Sprint 20250310 (38) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5946	Defect	Closed	Bryan Jensen	LOPS doesn't display G64 sample and assay if sample was converted from X16 and was routed to Ashion/Psnl (env with OOnSS	qa_assignee: null
LOPS-5935	Story	Verified	Kevin Detweiler	GHP: Update Assay Template Description	qa_assignee: null
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	qa_assignee: null
LOPS-5770	Story	Closed	Bryan Jensen	Manual Run Details: Prevent Duplicate Run Details	qa_assignee: null
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	qa_assignee: null

LOPS Sprint 20250113 (34) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5366	Story	Closed	Ron Enson	Update for Standard Test Method and Parameter List for Size Selection Quantification Reading	qa_assignee: null
LOPS-4749	Defect	Closed	Meghana Joshi	"Fail Assay" button should not work for Assay having "Initial" Status	qa_assignee: null

WESonX - Launch (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3105	Defect	Closed	—	Capture QC Review - Re-Quant - Add E-sign for Re-Quant action	qa_assignee: null
LOPS-1906	Defect	Closed	—	QC Batch Sample Type should be required in QC Method	qa_assignee: null

LOPS WES/WGS 20251020 (54) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6717	Story	Verified	Swati Giri	Support e-Signatures in Histopathology workflow	qa_assignee: null

LOPS WES/WGS 20250908 (51) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6234	Story	Verified	Dennis Lin	Hybridization Thermal Cycler: Support 'Hybridization Thermal Cycler' Run Details Task	qa_assignee: null

LOPS WES/WGS 20250811 (49) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7870	Story	Verified	Abdul Aziz	Extraction: Inform users if sample has been plated already or is a rework sample	qa_assignee: null

LOPS WH 20260223 (63) (M17) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8804	Tweak	Code Review	Brandon Culver	Breakdown of samples run through sequencing per gene.	qa_assignee: null

G64onLOPS Sprint 12 (27) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3738	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	qa_assignee: null

LOPS Sprint 20241230 (33) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5046	Story	Verified	Krishna Tanuku	Update name and description for LibPrep Quant to PostLib Quant test method, param list, spec	qa_assignee: null

LOPS Sprint 23 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3423	Story	Closed	Valeria Vargas	Update Well-Level Worklist Generators to include leading zero for single digit wells	qa_assignee: null

No Sprint Assigned (5 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-8930	Defect	Verified	Brandon Culver	Verso Retrieve Runlog not completing Racking Process Test	qa_assignee: null
LOPS-8929	Defect	Closed	—	cfDNA Pool Quant QC Review is not Releasing Pool Quant Results	qa_assignee: null
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	qa_assignee: null
LOPS-7373	Defect	Closed	Brandon Culver	Add REST role to all Actions (MD update)	qa_assignee: null
LOPS-2440	Defect	Verified	Dennis Lin	Capture Quant > Run Details - Reagents not validated as required	qa_assignee: null

Missing or Invalid Products

CRITICAL 17.6% pass rate (3995 violations / 4847 applicable)

Products field should have a value matching expected values.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9505	Sub-task	Opened	—	Create / Update PSD's	products: empty

LOPS-tfMRD-60-20260112 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9512	Sub-task	Closed	Klead Fusha	Create / Update PSD's for LOPS-9484 QC Review Actions Policy - By Array Method Version	products: empty

LOPS-tfMRD-54-20251020 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8913	Sub-task	Closed	Hani Yakan	tfMRD: Review the user guide 1.0.2.0 for accuracy	products: empty

LOPS-tfMRD-51-20250908 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8450	Sub-task	Closed	Isaac Vargas	Investigate and resolve cancel issue	products: empty
LOPS-7893	Sub-task	Closed	—	Update tickets for release 1.0.1.0	products: empty
LOPS-7892	Sub-task	Closed	—	Update user guide for release 1.0.1.0	products: empty

LOPS-tfMRD-49-20250811 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7969	Sub-task	Closed	Isaac Vargas	Create specifications and review tramline	products: empty

LOPS-tfMRD-48-20250728 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7410	Sub-task	Closed	Isaac Vargas	Rollback LV_Array SDC changes to fix display issues	products: empty
LOPS-6181	Story	Closed	Isaac Vargas	Update Plates & Gels list page sequencing queries to Support tfMRD Array Method and Flow Cell ID Search	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']

LOPS Sprint 20250714 (47) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9620	Story	Closed	Monish Grover	GHPv2 - Extraction: Blood Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-7684	Task	Closed	Bob Ruff	Update disposition for to assays in shakedown	products: invalid values ['sgNIPT']
LOPS-7563	Task	Closed	Ize Imai	WESWGS - Add Secrets k8s Resource to Web Chart	products: empty
LOPS-7556	Task	Closed	Dennis Lin	Re-review of the other files involved in the 5/14/25 WES/WGS merge	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7546	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.0.1	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7542	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.1	products: invalid values ['Signatera GHP']
LOPS-7541	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.1	products: invalid values ['Signatera WES']
LOPS-7530	Story	Closed	Monish Grover	Merger of LOPS-6732 to the WES/WGS 1.0.1.0 release	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7503	Story	Closed	Monish Grover	Extraction: WGS Extraction Samples Page	products: invalid values ['Signatera GHP']
LOPS-7484	Story	Closed	—	Histology: WES Incidents Page	products: invalid values ['Signatera WES']
LOPS-7480	Story	Closed	—	Histology: WGS Dissection Page	products: invalid values ['Signatera GHP']
LOPS-7478	Story	Closed	—	Histology: WES Pathology Review Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7476	Story	Closed	—	Histology: WGS H&E Staining Page	products: invalid values ['Signatera GHP']
LOPS-7474	Story	Closed	—	Histology: WGS Embedding Page	products: invalid values ['Signatera GHP']
LOPS-7403	Tweak	Closed	Ray Ward	Propagation of sgNIPT LOPS 1.2.0.4 production ePatch to WES/WGS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7306	Task	Closed	Ray Ward	WES/WGS 1.0.0.0 - Preprod environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7170	Defect	Verified	Leonid Garin	GHP: Extraction Quant: Known Concentration values are not populated for Quant Plate Standards after Quant File Re-Upload	products: invalid values ['Signatera GHP']
LOPS-6732	Story	Verified	Monish Grover	Active/Historical Array List Pages: Support Actions: Store, Dispose, UnStore, UnDispose	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6646	Task	Closed	Kevin Detweiler	Investigation of the inadvertent re-processing of 42322434.1-2-FXB	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6145	Story	Verified	Dennis Lin	WES/GHP: Blood Extraction: Support 'Blood Extraction' Run Details Task	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3300	Story	Verified	Monish Grover	WES/WGS: Tissue Extraction > Auto-Archive QC Batches based on Create Date	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS-tfMRD-47-20250713 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6989	Story	Closed	Hani Yakan	Mismatch detection for two different patient tubes associated with the same PLM/destination tube	products: invalid values ['sgNIPT']
LOPS-6538	Story	Closed	Hani Yakan	NOREAD in the isolation runlog files should be ignored	products: invalid values ['sgNIPT']

LOPS-tfMRD-46-20250630 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7124	Defect	Closed	Brad Garrett	Assay QC Sample Jasper reports fail to load metrics in metric results table	products: invalid values ['sgNIPT']
LOPS-6669	Story	Closed	Valeria Vargas	Update metric results table in Assay QC Jasper reports	products: invalid values ['sgNIPT']
LOPS-6616	Defect	Closed	—	PerformAutodisposition action throws error: Datasets do not have mandatory BATCH_LANE sdimetric	products: invalid values ['sgNIPT']
LOPS-6369	Story	Closed	Brad Garrett	Update LOPS pipeline results API response	products: invalid values ['sgNIPT']

LOPS Sprint 20250630 (46) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7527	Task	Closed	Ize Imai	CODEOWNERS update	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7409	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	products: empty
LOPS-7408	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	products: invalid values ['Signatera WES']
LOPS-7378	Task	Closed	Ray Ward	WES/WGS 1.0.0.0 - RC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7377	Task	Closed	—	WES/WGS 1.0.0.0 - PSPC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7339	Story	Verified	Ray Ward	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	products: invalid values ['Signatera WES']
LOPS-7285	Story	Closed	Ray Ward	Disabling the recording of event logs for the AddTrackItem event plan - code fix	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7284	Task	Closed	Ray Ward	Disabling the recording of event logs for the AddTrackItem event plan - production update	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7280	Defect	Closed	Swati Giri	Capture QC Review. Accept All action - error: Failed to process action 'ReleaseDataltem'.	products: invalid values ['Signatera WES']
LOPS-7252	Defect	Closed	Ray Ward	Assay Request (ITT000002) Transactions Causing Errors - production update	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7236	Story	Verified	Swati Giri	Update accessioning filtering - LOPS WES/WGS code fix	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7235	Story	Closed	Swati Giri	Update accessioning filtering - LOPS WES/WGS production instance	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7234	Story	Verified	Ray Ward	Library QC performance improvements - code fix	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7228	Defect	Closed	Ray Ward	Change Mode for ReworkCandidate on QCReviewDataset to resolve poor query performance (production fix)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7108	Task	Closed	Ariel Jirau	Add Kubernetes requests and limits for ephemeral storage to protect from evictions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7088	Task	Closed	Ray Ward	Investigation of increasing long run times for "Accept Partial" for QC review steps	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS Sprint 20250616 (45) (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7283	Task	Closed	Swati Giri	WES/WGS filtering updates - Day-Before environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7282	Task	Closed	Swati Giri	WES/WGS filtering updates - PSPC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7281	Task	Closed	Swati Giri	WES/WGS filtering updates - RC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7237	Task	Closed	Ize Imai	Identification of the removable sgNIPT-specific tickets in the LOPS 1.2.1.0 (M8) release	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7210	Defect	Closed	—	Error Executing SQL for LHRTransfer When Transferring Two 'Library Amplification' Plates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7200	Task	Closed	Ize Imai	Creation of WES/WGS-specific branches in the LOPS gitlab repo	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7185	Defect	Closed	Dennis Lin	Assay QC for SEQ plate with failed Sample-level post-sequencing QC and failed Run-level post-sequencing QC display empty	products: invalid values ['Signatera WES']
LOPS-7176	Task	Closed	Swati Giri	Investigation of Kafka message filtering, to limit the accessioning to just WES/WGS assays/samples.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7098	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Mila	products: empty
LOPS-7097	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Serhii	products: empty
LOPS-7096	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Dragana	products: empty
LOPS-7095	Task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7094	Task	Closed	—	WGS automated regression - LOPS 1.2.1.0 (M8)	products: invalid values ['Signatera GHP']
LOPS-7093	Task	Closed	—	WES automated regression - LOPS 1.2.1.0 (M8)	products: invalid values ['Signatera WES']
LOPS-7065	Defect	Verified	Ray Ward	pipelaunchid column set to "Do Not Retrieve" (code fix)	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7036	Task	Closed	Laura Dietrick	CLONE - MTT Fetal Focus (sgNIPT) shakedown/E2E support	products: invalid values ['sgNIPT']
LOPS-6990	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - Additional LOPS data mining	products: invalid values ['Signatera GHP']
LOPS-6952	Task	Closed	Mai Ton-Nu	MTT Fetal Focus (sgNIPT) shakedown/E2E support	products: invalid values ['sgNIPT']
LOPS-6949	Defect	Closed	Vasiliy Kumaev	LOPS fails to process ARM message if Measurement is not present in SamRep	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6899	Story	Closed	Dennis Lin	New Action Button - Setting of the rework reservation flag	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6898	Story	Closed	Dennis Lin	New Page - Historical Normalization Re-Run Samples for the Extraction group	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6796	Story	Closed	Dennis Lin	New Page - Normalization Re-Run Samples for the Extraction group	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6781	Task	Closed	Leonid Garin	Histo Guided Workflow Experiment	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6685	Sub-task	Closed	Brad Garrett	Create RunDetails for Pool Dilution and log Dilution Reagents	products: empty
LOPS-6558	Story	Closed	Brad Garrett	Update Trigger Assay Auto-Disposition button to support runs without batch level metrics	products: invalid values ['sgNIPT']
LOPS-5958	Story	Closed	Vasiliy Kumaev	Extend the rundata parser class to support parameter name mapping	products: invalid values ['sgNIPT']

LOPS Sprint 20250602 (44) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7064	Defect	Closed	Ray Ward	pipelaunchid column set to "Do Not Retrieve" (production fix)	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6973	Defect	Verified	Ray Ward	WGS Tissue WF: The -GQPCR and -GTAPE plates don't receive the "Reviewed" statuses after the -GLP2 plate's "QC review ->	products: invalid values ['Signatera GHP']
LOPS-6937	Defect	Verified	Kevin Detweiler	In Assay QC, after performing "Approve Selected" action, the "Trigger Assay Auto-Disposition" button does not display	products: invalid values ['Signatera WES']
LOPS-6928	Task	Closed	Ray Ward	Library Quant QC (-GQPCR and -GTAPE) plates not moving to "Reviewed" as expected (after -GLP2 QC Review)	products: invalid values ['Signatera GHP']
LOPS-6815	Task	Closed	Swati Giri	Kafka message filtering, to limit the accessioning to just WES/WGS assays/samples.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	products: invalid values ['sgNIPT']
LOPS-6739	Task	Opened	—	Prep e2e environment for data for user led UAT	products: empty
LOPS-6704	Defect	Verified	Monish Grover	Many errors in the ToDoList due to Status messages for WGS Filler samples	products: invalid values ['Signatera GHP']
LOPS-6640	Task	Closed	—	Spike - Assess if the check for Sequencer serialnum and side should be removed from the logic in processing the sequenci	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6479	Task	Closed	Dennis Lin	Performance profiling of the WES & WGS local QA automation regression test suites	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6279	Story	Verified	Kevin Detweiler	WES: Standardize Sequencing Prep Task: Update 'Input/Output Plate Type'	products: invalid values ['Signatera WES']
LOPS-6278	Story	Verified	Kevin Detweiler	WES/GHP: Standardize Tissue DNA Extraction Task: Update 'Input/Output Plate Type'	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6242	Story	Verified	Dennis Lin	WES: Sequencing: Support 'Sequencing' Run Details Task	products: invalid values ['Signatera WES']
LOPS-5578	Story	Verified	Dennis Lin	WES/GHP: Fragmentation: Support 'Fragmentation' Run Details Task	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5418	Story	Verified	Kevin Detweiler	Histo: Tissue Sample Return	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5086	Story	Ready for Development	Swati Giri	Map Exception Codes to WES Assay Templates	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-2748	Defect	Closed	Kevin Detweiler	Wes On X: Tissue DNA Extraction - Users can proceed with invalid Tissue DNA Plate Barcode	products: invalid values ['Signatera WES']

LOPS Sprint 20250519 (43) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6857	Task	Closed	—	Add Dennis Lin and Ray Ward to the set of Java & Javascript code approvers	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6853	Story	Verified	Swati Giri	Inclusion of LOPS-6703 in the LOPS 1.2.0.2 hotfix	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6843	Task	Closed	Monish Grover	LOPS 1.2.0.2 - Assessment of sgNIPT changes on shared WES/WGS code	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6842	Task	Closed	—	LOPS 1.2.0.2 - Manual WES / WGS regression testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6841	Task	Closed	—	LOPS 1.2.0.2 - WES/WGS automated regression	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6670	Defect	Verified	Ray Ward	Extraction/Library QC Review: Page Loading Timeout for 'Accept Partial' Action	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6641	Story	Verified	Ray Ward	WGS: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS Sprint 20250505 (42) (38 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6839	Task	Closed	Klead Fusha	Promote Array Results OOTB should not attempt to push empty data items	products: empty
LOPS-6824	Sub-task	Closed	Isaac Vargas	Update "tfMRD_Plates_FirstSizeSel" Query to retrieve only Active Array Methods	products: empty
LOPS-6823	Sub-task	Closed	Isaac Vargas	Update "tfMRD_Plates_SecondSizeSel" Query to retrieve only Active Array Methods	products: empty
LOPS-6799	Task	Closed	—	LOPS 1.2.0.1: WES/WGS automated regression	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6788	Defect	Verified	Leonid Garin	Reversion of changes to support ARM v1.19 schema resulted in blocked primer design jobs	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6771	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - LOPS data mining	products: invalid values ['Signatera GHP']
LOPS-6724	Defect	Verified	Lev Evstratov	Additional sgNIPT validations block rework for WES from Assay QC	products: invalid values ['Signatera WES']
LOPS-6722	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	products: empty
LOPS-6707	Task	Closed	—	"Test_LibraryPrep_Blood_QcReview_AcceptPartial "Scala script is not creating sufficient amount of Sample to test Accept	products: invalid values ['Signatera WES']
LOPS-6703	Story	Verified	Kevin Detweiler	Provide Access to "Record Incident" Button on the Sample Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6698	Defect	Verified	Ray Ward	Serious Performance Issues in the Assay QC Review > Failed Samples Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6694	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	products: empty
LOPS-6688	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	products: empty
LOPS-6682	Task	Opened	Klead Fusha	Hybrid Sample Selection Worklist - SampleNum	products: empty
LOPS-6673	Task	Closed	Brandon Culver	Merge Master (M7) to sgNIPT Launch	products: invalid values ['sgNIPT']
LOPS-6672	Task	Closed	—	Proof of concept: Multiple LabVantage DBs in a single RDS Instance	products: empty
LOPS-6656	Task	Closed	Monish Grover	Investigation of a standalone WES/WGS LOPS instance	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6609	Story	Verified	Swati Giri	WES/WGS: Tissue DNA Extraction: Record Water Reagent	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6608	Task	Closed	Ron Enson	Merge Master to Develop	products: invalid values ['sgNIPT']
LOPS-6544	Sub-task	Closed	—	LOPS-6535 - Optimize tfMRD user experience	products: empty
LOPS-6537	Sub-task	Closed	—	LOPS-6535 - Analyze ISO/EXT -PLM and -DNA barcode formatting	products: empty
LOPS-6494	Task	Closed	Leonid Garin	gDNA Rework - Investigation & Planning (Leonid)	products: invalid values ['Signatera GHP']
LOPS-6392	Task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6331	Task	Closed	—	WES/WGS automated regression	products: empty
LOPS-6303	Story	Verified	Leonid Garin	Update WES and WGS Sequencing Run array method params to support v3 Sequencing Run Complete message	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6288	Story	Verified	Abdul Aziz	Array List Pages: Support Search by Array Barcode	products: invalid values ['Signatera WES']
LOPS-6250	Defect	Closed	Ariel Jirau	Date time fields for lops packages in the S3 buckets does not match what is expected	products: invalid values ['sgNIPT']
LOPS-5990	Sub-task	Closed	—	LOPS-4501 - upload example JSON to confluence	products: empty
LOPS-5973	Sub-task	Closed	—	LOPS-4501 - Test the implementation	products: empty
LOPS-5972	Sub-task	Closed	—	LOPS-4501 - Send for QA	products: empty
LOPS-5971	Sub-task	Closed	—	LOPS-4501 - Send for review	products: empty
LOPS-5970	Sub-task	Closed	—	LOPS-4501 - Create Merge request	products: empty
LOPS-5957	Sub-task	Closed	—	LOPS-4501 - Create specifications	products: empty
LOPS-5956	Sub-task	Closed	—	LOPS-4501 - Implement the design	products: empty
LOPS-5955	Sub-task	Closed	—	LOPS-4501 - Validate requirements	products: empty
LOPS-5954	Sub-task	Closed	—	LOPS-4501 - Design Ticket	products: empty
LOPS-4714	Story	Verified	Dennis Lin	WES/GHP Tissue DNA Extraction > Run Details: Support 'Ethanol' Reagent Aliquot Part Number	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-2894	Story	Verified	Leonid Garin	Blood Extraction Results Review: Exclude Filler Samples from 'Fail and Re-Extract' Action	products: invalid values ['Signatera WES']

LOPS Sprint 20250421 (41) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6562	Task	Closed	Matt Smith	Read-only access to the LOPS database for Monish Grover	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6530	Task	Closed	Monish Grover	Investigation: Auto-Archive/Move Plates to ‘Historical Plate & Gels’ Tramstop when Assay QC is Complete	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6385	Defect	Verified	Leonid Garin	Address WGS Regression in PromoteResultsToSourceArray - results are released in action and should be controlled by calle	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6146	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Tissue DNA Plate Barcode	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6142	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Run Details Completed	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6063	Sub-task	Closed	—	Fill in gap between extraction and bead 1	products: empty
LOPS-6062	Sub-task	Closed	—	Add reagent NR-0750	products: empty
LOPS-5983	Story	Verified	Kevin Detweiler	Plate List Page > WES Actions: Support Tasks for Plates in the WES Workflow (Test Only)	products: invalid values ['Signatera WES']
LOPS-5817	Defect	Verified	Meghana Joshi	Unable to UnDispose or UnCancel samples that were Disposed/Cancelled directly from the Received state	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5722	Tweak	Closed	Vasiliy Kumaev	LOPS can perform pattern validations for parent and child/pool barcodes during sample creation event	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-5706	Story	Verified	Meghana Joshi	Support a way to view the Zone Data values for Historical Assay QC Arrays	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4154	Defect	Verified	Dennis Lin	Capture QC Review: Rejected plate with one Failed Pool does not apply completed status to Passed Samples since the order	products: invalid values ['Signatera WES']
LOPS-4091	Task	Closed	—	Create a test for check a build consistency	products: empty

LOPS Sprint 20250407 (40) (48 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6506	Task	Closed	—	Prepare for M7 and Hotfix 8 Deployment	products: empty
LOPS-6496	Task	Closed	—	LOPS 1.1.2.0 automated testing: Final round	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6493	Task	Closed	Surbhi Ray	gDNA Rework - Investigation & Planning (Surbhi)	products: invalid values ['Signatera GHP']
LOPS-6471	Task	Closed	Hani Yakan	Setup test framework with team	products: empty
LOPS-6463	Sub-task	Closed	—	LOPS-6459 - 15-Apr-2025 - consolidate Mindy and Brad's notes into confluence	products: empty
LOPS-6460	Task	Closed	Kevin Detweiler	LV LES module demo	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6443	Task	Closed	Matt Smith	Update DefaultArrayRunDataProcessor class	products: empty
LOPS-6417	Task	Closed	—	Investigate and fix issues related to sgnipt-integration-02 deployment with RDS	products: empty
LOPS-6401	Task	Opened	Ariel Jirau	Adjust development and test workloads resources in Kubernetes	products: empty
LOPS-6307	Task	Closed	Ariel Jirau	Merge development, check ear file and LivenessProbe enhancements into master branch	products: empty
LOPS-6294	Task	Closed	Matt Smith	R/W Access to LOPS Prod DB	products: empty
LOPS-6264	Task	In Progress	Hani Yakan	LOPS-6190 - Test the implementation	products: empty
LOPS-6238	Defect	Verified	Kevin Detweiler	WGS Tissue DNA Extraction Run Details: Test does not go to Completed Status	products: invalid values ['Signatera GHP']
LOPS-6218	Task	In Progress	—	LOPS-6211 - go over existing step implementations and make sure corrections are not needed	products: empty
LOPS-6215	Task	Opened	—	LOPS-6211 - Review requirements with stakeholders and identify missing tickets	products: empty
LOPS-6144	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Sequencing Tube Barcode	products: invalid values ['Signatera WES']
LOPS-6143	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Run Details Completed	products: invalid values ['Signatera WES']
LOPS-6101	Defect	Closed	—	Extra "WES Actions" button for RO user role on Test -> Plates & Gels List‎	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6092	Task	Closed	Dennis Lin	WES Workflow E2E Workthrough	products: empty
LOPS-6089	Defect	Verified	Leonid Garin	Error Message when performing Sequencing Prep for G64 (Test only)	products: invalid values ['Signatera GHP']
LOPS-6084	Task	Closed	Hani Yakan	LOPS- 4410 - Create a test document showing how to test this ticket	products: empty
LOPS-6061	Task	Closed	—	Generate list of lessons learned from LOPS Kubernetes production deployment	products: empty
LOPS-6060	Task	Closed	Ariel Jirau	Fix configserver integration with intfservice on Kubernetes	products: empty
LOPS-5992	Task	Closed	Leonid Garin	Create role for Read/Write Access to the database and provide appropriate DB access to ENG and EPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5974	Story	Verified	Dennis Lin	Run Details: Support Plate as 'Input/Output'	products: invalid values ['Signatera WES']
LOPS-5921	Defect	Verified	Meghana Joshi	WGS/WES Upload Library Prep Rundata - Required String 'ApplyArrayMethod' is null or empty.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5907	Story	Verified	Dennis Lin	WES: Plate List Page > Update 'Create Run Details'	products: invalid values ['Signatera WES']
LOPS-5905	Story	In Grooming	Dennis Lin	WES: QC Batch List Page > WES Actions: Validate Task per Workflow Step for QC Batch	products: invalid values ['Signatera WES']
LOPS-5717	Story	Ready for Development	Abdul Aziz	Blood Extraction: Validate Blood Extraction DNA Plate Barcode	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5689	Story	Verified	Dennis Lin	Capture Quant: Support 'Capture Quant' Run Details Task	products: invalid values ['Signatera WES']
LOPS-5568	Sub-task	Closed	—	Produce Sequence Run Message V2	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5511	Defect	Ready for SQA	Brandon Culver	Fix queries for tfMRD Post Capture Processing	products: invalid values ['Other']
LOPS-5406	Task	Code Review	Ariel Jirau	Document Engineering Focused Deployment Checklist	products: empty
LOPS-5343	Defect	Verified	Leonid Garin	Wes On X: Extraction + Library Quant: Known Concentration values are not populated for Quant Plate Standards after Quant	products: invalid values ['Signatera WES']
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	products: invalid values ['Signatera WES']
LOPS-5099	Sub-task	Closed	Ariel Jirau	Create M4-k8s build to deploy it on integration env	products: invalid values ['Other']
LOPS-4937	Defect	In Progress	Mikhail Terpugov	Refactoring of code related to the fix for LOPS-4805	products: invalid values ['Signatera GHP']
LOPS-4852	Story	Closed	Meghana Joshi	Support Sequencing Run Complete message processing using the v2 topic	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4837	Task	Reopened	—	Create a plan of migration from Rancher to k8s for LOPS and LV1	products: empty
LOPS-4046	Story	Development Blocked	Ron Enson	Remove or Obsolete the LabOperator and LabSupervisor jobtypes in LOPS	products: invalid values ['Other']
LOPS-4025	Defect	Ready for Development	—	Error message when clicking 'Create Consumable Arrays' button on the Add Consumable Lot page	products: invalid values ['Other']
LOPS-3989	Task	Opened	—	Sub-Task - Check all users and update the users that require Read Only jobtype to be set to Read Only	products: empty
LOPS-3075	Task	Blocked	—	Move IntfService Source Code and Job to Different Repo	products: empty
LOPS-2903	Story	Development Blocked	Hani Yakan	Extraction QC Review: Approve Plate > NOT Re-Queue Failed Blood Filler Samples for Blood Extraction (Test Only)	products: invalid values ['Signatera WES']
LOPS-2453	Task	Opened	Mai Ton-Nu	EQMT Type and Model data clean-up	products: empty
LOPS-1818	Defect	Opened	Abdul Aziz	Wes On X: Tissue DNA Extraction: Run Details - List reagents vertically	products: invalid values ['Signatera WES']
LOPS-1749	Defect	Verified	Kevin Detweiler	Wes On X: Tissue DNA Extraction > Run Details: Selecting instrument and reagents is not required to proceed	products: invalid values ['Signatera WES']
LOPS-1480	Tweak	Development Blocked	—	Create and manage instrument schedules at the model level	products: invalid values ['Other']

LOPS Sprint 20250324 (39) (95 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6305	Task	Closed	Laura Dietrick	Activate ITT000010 and ITT000012 transaction types	products: invalid values ['sgNIPT']
LOPS-6304	Task	Closed	Monish Grover	Manually activate ITT000010 and ITT000012 transaction type in e2e env	products: invalid values ['sgNIPT']
LOPS-6268	Sub-task	Closed	—	LOPS-6190 - Send and work with QA	products: empty
LOPS-6267	Sub-task	Closed	—	LOPS-6190 - Send for review and work with reviewer	products: empty
LOPS-6266	Sub-task	Closed	—	LOPS-6190 - Upload example JSON to confluence if relevant	products: empty
LOPS-6265	Sub-task	Closed	—	LOPS-6190 - Create specifications	products: empty
LOPS-6263	Sub-task	Closed	Hani Yakan	LOPS-6190 - Implement the design or changes	products: empty
LOPS-6262	Sub-task	Closed	Hani Yakan	LOPS-6190 - Design Ticket	products: empty
LOPS-6261	Sub-task	Closed	—	LOPS-6190 - Validate Requirements	products: empty
LOPS-6260	Task	Closed	Ariel Jirau	Integration Environments Support (post k8s migration)	products: empty
LOPS-6259	Sub-task	Closed	Hani Yakan	LOPS-6190 - Add the new process type and step to LOPS-5825	products: empty
LOPS-6255	Task	Closed	Ize Imai	Manual removal of DestTubeBarcode parameter	products: empty
LOPS-6254	Defect	Verified	Leonid Garin	Record Tissue DNA Extraction triggers Exception	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6244	Story	Verified	Monish Grover	Update gDNA RunDesign csv file to populate Plate 1 field with unique plate serial number + lot number + expiry	products: invalid values ['sgNIPT']
LOPS-6237	Defect	Verified	Sri Gorantla	Wrong transfer method is applied to gDNA Sequencing Prep plate.	products: invalid values ['sgNIPT']
LOPS-6235	Sub-task	Closed	—	Compare isolation and extraction steps configuration in labxe2e-03 to develop	products: empty
LOPS-6229	Defect	Closed	Sri Gorantla	Unable to test approve QC batch containing samples with Override status set to "Re-run"	products: invalid values ['sgNIPT']
LOPS-6226	Task	Closed	Ize Imai	Knowlege share for ReagentType and Units	products: empty
LOPS-6216	Story	Verified	Olawale Dada	Update PacBio Sequencing Plate reagent to include fields to track Serial number, lot number and expiry	products: invalid values ['sgNIPT']
LOPS-6214	Sub-task	Closed	—	LOPS-6211 - Map JIRA tickets to diagram activities	products: empty
LOPS-6213	Sub-task	Closed	—	LOPS-6211 - Create a diagram with detailed sub-steps	products: empty
LOPS-6212	Task	Closed	—	Reorganization of test cases	products: invalid values ['sgNIPT']
LOPS-6207	Story	Verified	Ray Ward	Update specification for sgNIPT gDNA Pool Tapestation quant	products: invalid values ['sgNIPT']
LOPS-6205	Story	Verified	Sri Gorantla	Update sgNIPT gDNA Pool Purification worklist to include SourceTube field and remove SourceWell	products: invalid values ['sgNIPT']
LOPS-6201	Defect	Verified	Michael Livingston	Run Details is created only for the 1 plate after creating 3 plates for PostLig Transfer	products: invalid values ['sgNIPT']
LOPS-6197	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 39	products: invalid values ['sgNIPT']
LOPS-6193	Task	Closed	Leonid Garin	Adjust the scheduled task to retrieve the schemas list from the master source instead of CI_SCHEDULED_JOB-LOPS-5516_uplo	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6183	Defect	Verified	—	sgNIPT gDNA Sequencing RunDetails TM Equipment should be mandatory	products: invalid values ['sgNIPT']
LOPS-6174	Defect	Closed	Anatoly Rybak	Test Only: Rundetails not populated for PEXT rundata consumption	products: invalid values ['sgNIPT']
LOPS-6173	Defect	Closed	Justin Jones	LOPS EQP data entry for QS QC batch missing vortex and Koda Sense	products: invalid values ['sgNIPT']
LOPS-6169	Task	Closed	Ariel Jirau	Fix Kubernetes deployments on testing environments	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6152	Task	Closed	Mehmet Ali Eken	Correct Code Incorrectly Creating SDIGroup for QC Batches	products: invalid values ['sgNIPT']
LOPS-6136	Defect	Verified	Krishna Tanuku	Unnecessary dilution is defined on sgNIPT gDNA CFTR LR-PCR Barcoding layout	products: invalid values ['sgNIPT']
LOPS-6135	Story	Verified	Krishna Tanuku	Update Array Zone Data Entry to sort by Array Method	products: invalid values ['sgNIPT']
LOPS-6133	Task	Closed	—	Assay-43 test cases update and clean up	products: invalid values ['sgNIPT']
LOPS-6121	Task	Closed	Vasilii Sevriugin	Merge latest master changes into M7 branch	products: empty
LOPS-6119	Story	Verified	Kevin Detweiler	WES: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	products: invalid values ['Signatera WES']
LOPS-6118	Task	Closed	Liubomyr Skorokhod	Process E2E Test Build1 samples	products: empty
LOPS-6108	Sub-task	Closed	—	LOPS-6079 - Send and work with QA	products: empty
LOPS-6107	Sub-task	Closed	—	LOPS-6079 - Send for review	products: empty
LOPS-6106	Sub-task	Closed	—	LOPS-6079 - Create Merge Request	products: empty
LOPS-6105	Sub-task	Closed	—	LOPS-6079 - Create specifications	products: empty
LOPS-6104	Sub-task	Closed	—	LOPS-6079 - Test the implementation	products: empty
LOPS-6103	Sub-task	Closed	—	LOPS-6079 - Implement the design or changes	products: empty
LOPS-6102	Sub-task	Closed	—	LOPS-6079 - Validate Requirements	products: empty
LOPS-6098	Story	Verified	Ize Imai	expand column sort to apply to samples on plate OR rack	products: invalid values ['sgNIPT']
LOPS-6094	Story	Closed	Valeria Vargas	Remove rack validation from Verso storage	products: invalid values ['sgNIPT']
LOPS-6066	Defect	Closed	—	Runlog processing is not recorded in SDI Group	products: invalid values ['sgNIPT']
LOPS-6054	Sub-task	Closed	Brad Garrett	E2E Hotfix for gDNA Extraction parameter change	products: invalid values ['sgNIPT']
LOPS-6042	Task	Closed	Vasilii Sevriugin	RMAN: the database archive logs should be deleted	products: invalid values ['Signatera WES']
LOPS-6037	Defect	Verified	Swati Giri	Unable to process gDNA Normalization runlog	products: invalid values ['sgNIPT']
LOPS-6023	Task	Closed	Ariel Jirau	Enable Kubernetes deployments from conductor	products: empty
LOPS-6002	Defect	Closed	Monish Grover	gDNA Pre-extraction runlog can only be uploaded for samples, not for NTC	products: invalid values ['sgNIPT']
LOPS-6001	Defect	Verified	Ize Imai	Plate to Rack loader for gDNA normalization validate that the box must be empty	products: invalid values ['sgNIPT']
LOPS-5976	Task	Closed	Gianna Bell-Eunice	Migrate to kubernetes on PSPC and E2E environments	products: invalid values ['sgNIPT']
LOPS-5968	Task	Closed	—	LOPS 1.1.2.0 regression automated testing: Platform	products: empty
LOPS-5967	Task	Closed	—	LOPS 1.1.2.0 automated testing: WGS	products: empty
LOPS-5966	Task	Closed	—	LOPS 1.1.2.0 automated testing: WES	products: empty
LOPS-5964	Task	Closed	—	Run regression for Reagent sync with new Kafka version 1.59	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5960	Task	Closed	Kathy Dao	cfDNA Manual Extraction design	products: invalid values ['sgNIPT']
LOPS-5953	Task	Closed	Ariel Jirau	Fix labworkflows-labvantage configuration for daybeforedeploy-01	products: empty
LOPS-5950	Story	Verified	Brandon Culver	Update RunDetail processing for hardcoded PL variant and paramtype issue	products: invalid values ['sgNIPT']
LOPS-5949	Defect	Verified	Kevin Detweiler	Address Error when generating 'Extraction QC Report' and 'Library QC Report'	products: invalid values ['Signatera WES']
LOPS-5906	Task	Closed	—	Deploy LOPS 1.1.1.2 (M6 Kubernetes) into Production (Rancher to Kubernetes Environment Migration)	products: empty
LOPS-5904	Story	Closed	Vasiliy Kumaev	Spike - investigate options for applying array layout after array creation	products: invalid values ['sgNIPT']
LOPS-5858	Task	Closed	—	Generate new or uplift current queries to account for the changed data model related to Pipeline metrics in sgNITP	products: empty
LOPS-5820	Story	Verified	Vasiliy Kumaev	Update Spectramax processor for result promotion to source array and Quant Plating AM and Quant Review AM creation	products: invalid values ['sgNIPT']
LOPS-5812	Sub-task	Closed	—	7 - Move to SQA	products: empty
LOPS-5811	Sub-task	Closed	—	6 - Find Reviewer	products: empty
LOPS-5810	Sub-task	Closed	—	5 - Create Spec	products: empty
LOPS-5809	Sub-task	Closed	—	4 - Create Merge Request	products: empty
LOPS-5808	Sub-task	Closed	—	3 - Implement, Test, Export	products: empty
LOPS-5807	Sub-task	Closed	—	2 - Create Branch	products: empty
LOPS-5806	Sub-task	Closed	—	1 - Link Requirements	products: empty
LOPS-5799	Story	Verified	Meghana Joshi	Support for barcode validations when Pooling Tissue Slides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5786	Story	Verified	Monish Grover	Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	products: invalid values ['sgNIPT']
LOPS-5680	Task	Closed	Ariel Jirau	Provide k8s configuration support for gspintegration-01 environment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5646	Story	Verified	Ray Ward	Associate NR0835 to the LR-PCR barcoding array method	products: invalid values ['sgNIPT']
LOPS-5639	Story	Verified	Meghana Joshi	Support for barcode validations when creating Tissue Slides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5605	Story	Verified	Kevin Detweiler	Assay Details Page: Add a 'Workitem Description' column next to 'Workitem ID'	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5563	Story	Verified	Vasilii Sevriugin	PacBio LRPCR - Update Sequencing Run Complete Processing Code (array lookup)	products: invalid values ['sgNIPT']
LOPS-5532	Story	Verified	Ize Imai	Update Worklist generator to exclude failing Samples	products: invalid values ['sgNIPT']
LOPS-5367	Story	Verified	Ize Imai	cfDNA Sequencing Prep Pool Quant runlog parsing	products: invalid values ['sgNIPT']
LOPS-5348	Story	Verified	Sri Gorantla	Residual Quant Array method/layout	products: invalid values ['sgNIPT']
LOPS-5323	Task	Closed	Laura Dietrick	Update sgNIPT User Guide for cfDNA Process	products: invalid values ['sgNIPT']
LOPS-5318	Story	Verified	Leonid Garin	Update Pipe Launch Request for WES and G64 to query using old and new attribute types for assayRequestDependencies	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5254	Story	Verified	Sri Gorantla	gDNA Library Prep Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5166	Story	Verified	Leonid Garin	Allow users to re-queue partial plate of patient blood samples that have failed extraction quant for pre-extraction	products: invalid values ['sgNIPT']
LOPS-5155	Story	Closed	Krishna Tanuku	PostLib Residual Quant test method and parameter list and PostLib Quant group test method update	products: invalid values ['sgNIPT']
LOPS-4675	Story	Verified	Vasiliy Kumaev	Allow sample rework from Assay QC	products: invalid values ['sgNIPT']
LOPS-4098	Story	Verified	Sri Gorantla	gDNA Master Mix part number set up	products: invalid values ['sgNIPT']
LOPS-3301	Story	Verified	Dennis Lin	Extraction/Library QC: Update Plate-Level Sample QC (Minimum Number of Samples)	products: invalid values ['Signatera WES']
LOPS-2747	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (2 of 3 - Sample Results)	products: invalid values ['sgNIPT']
LOPS-2709	Story	Verified	Vasiliy Kumaev	cfDNA PostLib Quant Result (Spectramax) - Runlog Processor	products: invalid values ['sgNIPT']
LOPS-2489	Defect	Verified	Kevin Detweiler	Sequencing Prep: Reagents not validated as required (Test Only)	products: invalid values ['Signatera WES']

LOPS Sprint 20250310 (38) (64 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6165	Story	Verified	Sri Gorantla	Associate LR-PCR barcode primer plates to gDNA LR-PCR barcoding plates	products: invalid values ['sgNIPT']
LOPS-6158	Defect	Verified	Monish Grover	Update the worklist prefix for Post Ligation Transfer step	products: invalid values ['sgNIPT']
LOPS-6153	Task	Closed	Ize Imai	Move "RackToPlateMultiplePlatesRunDataProcessor" to correct package location	products: invalid values ['sgNIPT']
LOPS-6100	Story	Verified	Monish Grover	Add Approval Types to sgNIPT Quant Steps	products: invalid values ['sgNIPT']
LOPS-6087	Task	Closed	Leonid Garin	Update Tool/script(s) to create cfDNA and tfMRD sequencing arrays per correct array layout	products: invalid values ['sgNIPT']
LOPS-6072	Task	Closed	Ariel Jirau	Migrate master into develop branch for both infr and main application repositories (Kubernetes conversion)	products: empty
LOPS-6068	Defect	Verified	Vasiliy Kumaev	User is unable to Log Exceptions from the Assay Maint page	products: invalid values ['sgNIPT']
LOPS-6057	Defect	Verified	Michael Livingston	Restore previously implemented Verso Retrieve nodes for CFTR, HBA, HBB	products: invalid values ['sgNIPT']
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	products: invalid values ['Signatera WES']
LOPS-6045	Task	Closed	Nikita Tilkov	Add a host for the second DataBase for the Reagent Sync testing environment	products: invalid values ['Signatera WES']
LOPS-6044	Task	Closed	Mikhail Dubrovin	Kafka 1.59.0 connectors work with unpredictable delay	products: invalid values ['Signatera WES']
LOPS-6029	Defect	Verified	Brandon Culver	Fix Library Prep runlog processing	products: invalid values ['sgNIPT']
LOPS-6028	Tweak	Verified	Leonid Garin	Hybrid Capture - Update seq manifest processor to save Pipeline Json Id to array method	products: invalid values ['sgNIPT']
LOPS-6018	Task	Closed	Gianna Bell-Eunice	Deploy latest develop branch on Sandbox, PSPC and E2E environments	products: invalid values ['sgNIPT']
LOPS-6015	Story	Verified	Sri Gorantla	Consumable Update to Array Method sgNIPT cfDNA Library Amplification	products: invalid values ['sgNIPT']
LOPS-6007	Task	Closed	—	Testing of a strategy for a resequencing planned deviation for G64	products: invalid values ['Signatera GHP']
LOPS-6005	Defect	Verified	Kathy Dao	NR0364 reagent cannot be loaded to sgNIPT gDNA Extraction plate.	products: invalid values ['sgNIPT']
LOPS-5993	Tweak	Closed	—	Update Threshold for G64 Sequencing Run Metric	products: invalid values ['Signatera GHP']
LOPS-5986	Defect	Verified	Michael Livingston	SGNIPT_CFDNA_CAPTURE worklist does not have zero padded SourcePosition and DestWell fields (A01)	products: invalid values ['sgNIPT']
LOPS-5982	Defect	Verified	Ray Ward	PlateInfo section should not be in SGNIPT_CFDNA_HYBRID worklist	products: invalid values ['sgNIPT']
LOPS-5977	Defect	Verified	Lev Evstratov	Quant AM is not applied to Quant plate (-QIT) during cfDNA PostLib Quant Plating (Biomek)	products: invalid values ['sgNIPT']
LOPS-5962	Sub-task	Closed	Leonid Garin	Please add support for lr-pcr controls in pipeline launch request	products: empty
LOPS-5946	Defect	Closed	Bryan Jensen	LOPS doesn't display G64 sample and assay if sample was converted from X16 and was routed to Ashion/Psnl (env with OOnSS	products: invalid values ['Signatera CLIA', 'Signatera GHP']
LOPS-5935	Story	Verified	Kevin Detweiler	GHP: Update Assay Template Description	products: invalid values ['Signatera GHP']
LOPS-5929	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 38	products: invalid values ['sgNIPT']
LOPS-5928	Sub-task	Closed	Meghana Joshi	Deploying error - unbound variable in maintenance.sh script	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5923	Story	Closed	—	Test only: Verify LOPS can process pipeline results containing value of E+09 magnitude	products: invalid values ['sgNIPT']
LOPS-5911	Defect	Verified	Michael Livingston	DestPosition for Verso Retrieve worklists does not accurately reflect possible rack positions	products: invalid values ['sgNIPT']
LOPS-5910	Story	Verified	Krishna Tanuku	Create a new run detail group for sgNIPt cfDNA PostLig Pur manual step	products: invalid values ['sgNIPT']
LOPS-5909	Story	Closed	—	Test only: Trigger LRPCR pipeline via REST API (Controls)	products: invalid values ['sgNIPT']
LOPS-5888	Defect	Verified	Sri Gorantla	sgNipt: cfDna - sNIPT PostLig Transfer Specification always fails a sample, prevents subsequent TM assignment	products: invalid values ['sgNIPT']
LOPS-5870	Tweak	Verified	Sri Gorantla	Update sgNIPT Verso Retrieve DestPosition Query for Row Major Orientation for gDNA downstream assays (CFTR, HBA, HBB)	products: invalid values ['sgNIPT']
LOPS-5855	Task	Closed	Alex Pakhunov	Investigation :: Debezium doesn't post LV DB updates to Kafka	products: invalid values ['Other']
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	products: invalid values ['Signatera WES']
LOPS-5834	Story	Verified	Swati Giri	Update SourceWell field in worklists to SourcePosition	products: invalid values ['sgNIPT']
LOPS-5830	Defect	Closed	Meghana Joshi	Users encounter error when using Bulk Retest from the Manage Tests page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5796	Task	Closed	Swati Giri	Add Equipment needed for sgNIPT E2E testing to E2E environment	products: invalid values ['sgNIPT']
LOPS-5795	Task	Closed	—	Reagent Lot creation in sgNIPT E2E environment	products: invalid values ['sgNIPT']
LOPS-5792	Defect	Closed	—	Sample container not assigned to gDNA PEXT to EXT transfer method	products: invalid values ['sgNIPT']
LOPS-5790	Story	Verified	Ray Ward	Update LR-PCR Primer Plate maps to add Amplicon #/Multiplier and size multiplier	products: invalid values ['sgNIPT']
LOPS-5770	Story	Closed	Bryan Jensen	Manual Run Details: Prevent Duplicate Run Details	products: invalid values ['Signatera WES']
LOPS-5768	Task	Closed	—	Test Behavior for Failed Filler Samples	products: invalid values ['Signatera WES']
LOPS-5764	Story	Verified	Michael Livingston	cfDNA Post Ligation Transfer runlog processor, Library Amplification worklist generator, PostLig Transfer array method	products: invalid values ['sgNIPT']
LOPS-5683	Story	Verified	Olawale Dada	gDNA Barcode Primer Plate maps consumable type updates	products: invalid values ['sgNIPT']
LOPS-5658	Story	Verified	Klead Fusha	cfDNA Sequencing Prep Pool Dilution runlog parsing	products: invalid values ['sgNIPT']
LOPS-5653	Tweak	Verified	Joeseph Colca	Update array list page queries to include sgNIPT array methods for assay QC	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5635	Defect	Verified	Kevin Detweiler	Sequencing Prep: Plate Barcode should be mandatory	products: invalid values ['Signatera WES']
LOPS-5516	Task	Closed	Leonid Garin	Download production JSON schemas from the server to the S3 bucket once a day	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5490	Story	Verified	Meghana Joshi	List Array Methods dropdown in the Assay QC filter in alphabetical order	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	products: invalid values ['Signatera WES']
LOPS-5389	Story	Verified	Kevin Detweiler	WES: Extraction Samples Page > Display Assay	products: invalid values ['Signatera WES']
LOPS-5360	Story	Verified	Olawale Dada	cfDNA Library Prep Runlog parsing	products: invalid values ['sgNIPT']
LOPS-5320	Task	Closed	—	Test Only: cfDNA sequencing manifest generation	products: invalid values ['sgNIPT']
LOPS-5242	Story	Verified	Klead Fusha	gDNA LR-PCR Pool Purification Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5237	Story	Verified	Krishna Tanuku	Hybrid Capture Day 1 Hybridization Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5235	Story	Verified	Klead Fusha	gDNA LR-PCR Pooling Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5233	Story	Verified	Klead Fusha	gDNA LR-PCR Quantification Plating - Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5232	Story	Verified	Mai Ton-Nu	gDNA LR-PCR Quantification Worklist Generation	products: invalid values ['sgNIPT']
LOPS-5230	Story	Verified	Lev Evstratov	gDNA LR-PCR Barcoding Worklist generation	products: invalid values ['sgNIPT']
LOPS-5203	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number setup and name updates	products: invalid values ['sgNIPT']
LOPS-5080	Story	Verified	Michael Livingston	gDNA LR-PCR Pool Purification worklist generation	products: invalid values ['sgNIPT']
LOPS-5028	Story	Verified	Kevin Detweiler	Sample List Page > Display Patient Sample Barcode for Samples on Plate	products: invalid values ['Signatera WES']
LOPS-3882	Story	Verified	Leonid Garin	Update Default ArrayRunData Processing for sgNIPT	products: invalid values ['sgNIPT']
LOPS-2708	Story	Verified	Gianna Bell-Eunice	Library amplification purification instrument integration	products: invalid values ['sgNIPT']

LOPS Sprint 20250224 (37) (98 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	products: invalid values ['sgNIPT']
LOPS-5985	Tweak	Verified	Brandon Culver	Update gDNA Ext quant plate suffix check to -LREXT	products: invalid values ['sgNIPT']
LOPS-5963	Task	Closed	—	Run automated regression for new Kafka version 1.59	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5959	Defect	Verified	Michael Livingston	sgNipt: Assay 43 - Controls are not propagated during HYB2 -> Pool (Pool Dilution) transfer	products: invalid values ['sgNIPT']
LOPS-5945	Task	Closed	Ize Imai	Knowledge share for asynchronous actions in LV	products: empty
LOPS-5943	Defect	Verified	Brandon Culver	Unable to generate gDNA Normalization worklist	products: invalid values ['sgNIPT']
LOPS-5924	Task	Closed	—	Merge 1.1.0.2, 1.1.1.1, 1.1.0.1, 1.1.1.0 items in Jama to Production	products: empty
LOPS-5917	Story	Verified	Ray Ward	QC Batch RunDetails Updates	products: invalid values ['sgNIPT']
LOPS-5915	Task	Closed	Mehmet Ali Eken	Resolve Overwritten User REST API Access Role Assignment configuration due to merge conflicts	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5903	Story	Closed	—	Test only: LRPCR - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	products: invalid values ['sgNIPT']
LOPS-5902	Story	Verified	Meghana Joshi	Plate to Rack processor and loader for gDNA normalization	products: invalid values ['sgNIPT']
LOPS-5891	Defect	Verified	Krishna Tanuku	gDNA Extraction runlog uploading returns error	products: invalid values ['sgNIPT']
LOPS-5884	Defect	Verified	Joeseph Colca	sgNipt: cfDna - Two Library Quant Test Methods in Assay-43 Assay Template	products: invalid values ['sgNIPT']
LOPS-5881	Defect	Closed	Meghana Joshi	Users encounter error when Failing an Assay from Assay QC or the Assay Maint page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5880	Story	Verified	Sri Gorantla	Updates to sequencing run test method parameters	products: invalid values ['sgNIPT']
LOPS-5879	Story	Verified	Mai Ton-Nu	Create cfDNA and gDNA reagents in LOPS	products: invalid values ['sgNIPT']
LOPS-5877	Defect	Verified	Vasiliy Kumaev	Error encountered during QuantResult post-processing. Failed with message: 'null'"	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5875	Task	Closed	Meghana Joshi	Retest LOPS-4939 After Refactoring	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5874	Task	Closed	—	Communicate Child Sample Creation issue to VantageCare	products: empty
LOPS-5873	Defect	Verified	Ize Imai	Restore missing buttons removed by M7 merge	products: invalid values ['sgNIPT']
LOPS-5872	Task	Closed	Ariel Jirau	Add confluence page with steps to prepare a RDS development instance for datamesh integration	products: empty
LOPS-5868	Task	Closed	Vasilii Sevriugin	Include 'autotest' env name into list for labworkflow Kafka schema register - register-schemas.sh	products: invalid values ['Other']
LOPS-5862	Story	Verified	Lev Evstratov	Natera barcode is not being populated after cfDNA Extraction runlog processing	products: invalid values ['sgNIPT']
LOPS-5837	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration, E2E, and user sandbox environments	products: invalid values ['sgNIPT']
LOPS-5831	Sub-task	Closed	Ron Enson	Worklist Generation Error Array Method sgNIPT cfDNA LibraryPrep Complete	products: invalid values ['sgNIPT']
LOPS-5823	Defect	Verified	Joeseph Colca	CreateSequenceManifest button has reappeared on Arrays List page	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-5818	Story	Closed	Leonid Garin	Test only: Update which outputs are being recorded to assay from pipeline result json (LRPCR)	products: invalid values ['sgNIPT']
LOPS-5814	Story	Verified	Mehmet Ali Eken	Restrict sample and array barcode editing to Admins only	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5773	Defect	Verified	Mehmet Ali Eken	Missing/inaccessible "Close Incident" button	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5765	Defect	Closed	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method cannot be performed	products: invalid values ['sgNIPT']
LOPS-5756	Story	Closed	Alex Pakhunov	Give NtrJsonWorklistGenerator the ability to specify sample listing sort order	products: invalid values ['sgNIPT']
LOPS-5750	Sub-task	Closed	—	7 - Move to SQA	products: empty
LOPS-5749	Sub-task	Closed	—	6 - Find Reviewer	products: empty
LOPS-5748	Sub-task	Closed	—	5 - Create Spec	products: empty
LOPS-5747	Sub-task	Closed	—	4 - Create Merge Request	products: empty
LOPS-5746	Sub-task	Closed	—	3 - Implement, Test, Export	products: empty
LOPS-5745	Sub-task	Closed	—	2 - Create Branch from release/Develop	products: empty
LOPS-5744	Sub-task	Closed	—	1 - Link Requirements	products: empty
LOPS-5716	Task	Closed	—	LOPS 1.1.1.2 automated testing: Platform	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5715	Task	Closed	—	LOPS 1.1.1.2 automated testing: WGS (k8s)	products: invalid values ['Signatera GHP']
LOPS-5714	Task	Closed	—	LOPS 1.1.1.2 automated testing: WES (K8s)	products: invalid values ['Signatera WES']
LOPS-5713	Task	Closed	—	Labworkflows local environment validation: validate that configuration changes made for Kubernetes does not affect runn	products: empty
LOPS-5709	Defect	Verified	Ray Ward	Complete? param missing from sgNIPT cfDNA Hybrid and Capture array methods	products: invalid values ['sgNIPT']
LOPS-5708	Story	Verified	Monish Grover	Updates to gDNA extraction quant master data to support QC Review on orignal extraction plate	products: invalid values ['sgNIPT']
LOPS-5701	Tweak	Verified	Leonid Garin	Unable to generate QC batch comprised of patient streck tubes after isolation runlog processing	products: invalid values ['sgNIPT']
LOPS-5686	Task	Closed	Ariel Jirau	Configure Fulfillment DMS Service integration with development RDS Oracle instance (g64 e2e)	products: invalid values ['Signatera GHP']
LOPS-5652	Story	Verified	Ron Enson	Create cfDNA and gDNA reagents in LOPS	products: invalid values ['sgNIPT']
LOPS-5649	Story	Verified	Dennis Lin	Blood Extraction Results Review: Hide 'Log Exception' Action	products: invalid values ['Signatera WES']
LOPS-5645	Defect	Verified	Klead Fusha	HybCap Day 2 Runlog uploading returns error.	products: invalid values ['sgNIPT']
LOPS-5634	Sub-task	Closed	—	8-LOPS-5512 subtask - Move ticket to SQA	products: empty
LOPS-5633	Sub-task	Closed	—	7-LOPS-5512 subtask - Find someone to review	products: empty
LOPS-5632	Sub-task	Closed	—	6-LOPS-5512 subtask - Create specification(s)	products: empty
LOPS-5631	Sub-task	Closed	—	4-LOPS-5512 subtask - Create a merge request	products: empty
LOPS-5630	Sub-task	Closed	—	3-LOPS-5512 subtask - Implement, test the change and export	products: empty
LOPS-5629	Sub-task	Closed	—	2-LOPS-5512 subtask - Create a branch from release/Develop	products: empty
LOPS-5628	Sub-task	Closed	—	1-LOPS-5512 subtask - Link the requirements with a reader friendly link	products: empty
LOPS-5606	Task	Closed	Jonathan Quinn	Investigate barcode validation option using params for plasma manual/partial isolation	products: invalid values ['sgNIPT']
LOPS-5595	Story	Closed	Swati Giri	Updates to cfDNA and gDNA sequencing run test method parameters	products: invalid values ['sgNIPT']
LOPS-5588	Story	Verified	Kathy Dao	Associate Creation of RunLog TM and and update to MD	products: invalid values ['sgNIPT']
LOPS-5559	Story	Verified	Meghana Joshi	Update processor of sgNIPT pipeline-result messages to use sdidataid as key	products: invalid values ['sgNIPT']
LOPS-5556	Story	Closed	—	Update LOPS API Pipeline Outputs to also send collection kit in requested assay	products: invalid values ['sgNIPT']
LOPS-5524	Tweak	Verified	Mehmet Ali Eken	Add additional Exception Codes for sgNIPT	products: invalid values ['sgNIPT']
LOPS-5520	Task	Closed	—	cfDNA updates - Add new sample type for new NA12878 part - NR0835	products: invalid values ['sgNIPT']
LOPS-5518	Story	Verified	Olawale Dada	Set FFE upper and lower thresholds for cfDNA control lots in LOPS	products: invalid values ['sgNIPT']
LOPS-5512	Story	Closed	Ray Ward	Update End Repair Plating Worklist Policy Node for multiple rack sample ranges	products: invalid values ['sgNIPT']
LOPS-5485	Task	Closed	Meghana Joshi	Merge M7 (1.1.2.0) to Develop	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5477	Story	Verified	Leonid Garin	Test only: Have the ability to record pipeline outputs (file paths) from pipeline result (LRPCR)	products: invalid values ['sgNIPT']
LOPS-5400	Story	Closed	—	Test only: NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	products: invalid values ['sgNIPT']
LOPS-5388	Story	Verified	Swati Giri	WES: Extraction Samples Page	products: invalid values ['Signatera WES']
LOPS-5386	Story	Closed	Alex Pakhunov	Update the reagent sync to also sync the u_containerbarcode/matrix barcode fields.	products: invalid values ['Other', 'sgNIPT']
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	products: invalid values ['sgNIPT']
LOPS-5335	Story	Verified	Sri Gorantla	Update HBB barcoding array layout and update for HBB Quant	products: invalid values ['sgNIPT']
LOPS-5314	Story	Verified	Kevin Detweiler	Review of read-only job type changes	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5311	Story	Verified	Klead Fusha	cfDNA Library Prep End Repair Runlog parsing	products: invalid values ['sgNIPT']
LOPS-5278	Story	Verified	Leonid Garin	Trigger Hybrid Capture pipeline via REST API - Continue 2 (ControlFFE)	products: invalid values ['sgNIPT']
LOPS-5260	Story	Verified	Leonid Garin	Update Reagent Validation API to matrix barcode	products: invalid values ['sgNIPT']
LOPS-5241	Defect	Closed	Monish Grover	Revert changes merged in G64 for LOPS-2428	products: invalid values ['Other']
LOPS-5239	Story	Verified	Krishna Tanuku	Hybrid Capture Day 2 Capture Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-5231	Story	Verified	Klead Fusha	gDNA LR-PCR Barcoding Runlog parsing	products: invalid values ['sgNIPT']
LOPS-5201	Story	Verified	Mehmet Ali Eken	Investigate and implement REST action restrictions	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5190	Task	Closed	Leonid Garin	Remove mock test/array/transfer method which were involved in LOPS-1542 for testing	products: invalid values ['sgNIPT']
LOPS-5142	Story	Verified	Sri Gorantla	Remove calculations for gDNA LR-PCR quant and update master data	products: invalid values ['sgNIPT']
LOPS-4994	Story	Verified	Lev Evstratov	Allow users to select the same plate for different PacBio sequencing runs in LOPS	products: invalid values ['sgNIPT']
LOPS-4903	Story	Verified	—	PacBio LRPCR - Assay QC UI (1 of 3 - General, RunResult, Batch)	products: invalid values ['sgNIPT']
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	products: invalid values ['sgNIPT']
LOPS-4082	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate	products: invalid values ['sgNIPT']
LOPS-4080	Task	Closed	Leonid Garin	Create Script and Process to Check Production for Required Manual Updates Post Deployment	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-3754	Story	Verified	Swati Giri	WES: Tissue Extraction Re-Run: Display 'Tissue Extraction Run Number' for Tissue Samples Queued for Tissue Extraction	products: invalid values ['Signatera WES']
LOPS-3427	Story	Verified	Ray Ward	Track Input/Output Plate Barcodes in Run Details across Automated Workflow Steps	products: invalid values ['Signatera WES']
LOPS-2800	Story	Verified	Klead Fusha	Implement Rack to Plate Transfer Class for sgNIPT Runlog processing	products: invalid values ['sgNIPT']
LOPS-2799	Story	Verified	Ron Enson	Hybrid Capture Day 1 Hybridization worklist generation - Impl work	products: invalid values ['sgNIPT']
LOPS-2764	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (3 of 3 - Control Results)	products: invalid values ['sgNIPT']
LOPS-2751	Story	Closed	—	Support actions at gDNA extraction quant results review	products: invalid values ['sgNIPT']
LOPS-2739	Story	Verified	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method	products: invalid values ['sgNIPT']
LOPS-2662	Story	Closed	Olawale Dada	gDNA Normalization runlog processing	products: invalid values ['sgNIPT']
LOPS-2652	Story	Verified	Krishna Tanuku	gDNA Pre-extraction and Extraction runlog processing	products: invalid values ['sgNIPT']
LOPS-2473	Story	Verified	Gianna Bell-Eunice	gDNA Sample batching protocol - implementation work	products: invalid values ['sgNIPT']
LOPS-2429	Story	Verified	Lev Evstratov	cfDNA Post Library Quant Plating (Biomek) - Runlog Parsing	products: invalid values ['sgNIPT']

LOPS Sprint 20250210 (36) (96 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5869	Sub-task	Closed	Vasilii Sevriugin	ProcessAssayRequestJson fails for sgNIPT Algs request	products: invalid values ['sgNIPT']
LOPS-5826	Task	Closed	Ariel Jirau	Enhance Lambda code to be able to cope with different redshift schemas	products: empty
LOPS-5821	Task	Closed	—	SPIKE: Investigation of gDNA Extraction Quant sample and plate evaluation in LV1.0	products: invalid values ['sgNIPT']
LOPS-5813	Defect	Verified	Ize Imai	WES: reagents are not available on Run Details View page	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5800	Tweak	Verified	Vasilii Sevriugin	Refactor Assay Code Whitelisting to allow more Assay Codes to be Added	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5787	Defect	Verified	Olawale Dada	CFTR Primer Plate 1 is missing Well Positions	products: invalid values ['sgNIPT']
LOPS-5763	Defect	Closed	Ize Imai	Worklist Generation Select Process Type incorrect	products: invalid values ['sgNIPT']
LOPS-5758	Tweak	Verified	Michael Livingston	Updates for gDNA Pre-extraction and Isolation worklist fields	products: invalid values ['sgNIPT']
LOPS-5755	Task	Closed	—	Run automated regression test for hotfix 1.1.0.2 Platform	products: empty
LOPS-5754	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WGS	products: empty
LOPS-5753	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WES	products: empty
LOPS-5751	Defect	Verified	Dennis Lin	WGS: Extraction QC Review error: Could not execute script from iframe	products: invalid values ['Signatera GHP CTA', 'Signatera WES']
LOPS-5740	Task	Closed	Krishna Tanuku	Deploy latest LOPS build to sgNIPT E2E Environment	products: invalid values ['sgNIPT']
LOPS-5726	Story	Closed	Vasiliy Kumaev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3) Part 2 - Batches	products: invalid values ['sgNIPT']
LOPS-5712	Task	Closed	Matt Smith	Account for access to LOPS Production	products: empty
LOPS-5710	Defect	Verified	Monish Grover	Assay-41 is not completed automatically when all workitems are completed.	products: invalid values ['sgNIPT']
LOPS-5699	Defect	Verified	Leonid Garin	If multiple genes are requested for a sample, only one 'sgNIPT gDNA Sequencing Run' dataset is marked as Completed when	products: invalid values ['sgNIPT']
LOPS-5687	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 20 (36)	products: invalid values ['sgNIPT']
LOPS-5684	Task	Closed	Ariel Jirau	Merge release/LOPS-1.1.1.0 into Kubernetes branches in preparation for production deployment readiness	products: empty
LOPS-5682	Task	Closed	Alex Pakhunov	Update Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	products: invalid values ['sgNIPT']
LOPS-5681	Task	Closed	Michael Livingston	Restore missing/lost configuration to paramlist sdc	products: invalid values ['sgNIPT']
LOPS-5678	Task	Closed	Kevin Detweiler	Identify root cause for missing workflow step start/end timestamp	products: invalid values ['Signatera WES']
LOPS-5672	Defect	Verified	Monish Grover	Worklist cannot be generated and downloaded for Plasma Isolation samples.	products: invalid values ['sgNIPT']
LOPS-5667	Sub-task	Closed	—	7-LOPS-5562 subtask - Move ticket to SQA	products: empty
LOPS-5666	Sub-task	Closed	—	6-LOPS-5562 subtask - Find someone to review	products: empty
LOPS-5665	Sub-task	Closed	—	5-LOPS-5562 subtask - Create specification(s)	products: empty
LOPS-5664	Sub-task	Closed	—	4-LOPS-5562 subtask - Create a merge request	products: empty
LOPS-5663	Sub-task	Closed	—	3-LOPS-5562 subtask - Implement, test the change and export	products: empty
LOPS-5662	Sub-task	Closed	—	2-LOPS-5562 subtask - Create a branch from release/Develop	products: empty
LOPS-5661	Sub-task	Closed	—	1-LOPS-5562 subtask - Link the requirements with a reader friendly link	products: empty
LOPS-5659	Defect	Verified	Mikhail Makarin	Currently there is a restirction that only allows one plate range instead of allowing for multiple ranges.	products: invalid values ['sgNIPT']
LOPS-5647	Task	Closed	Mai Ton-Nu	Clean up JAMA TestScripts hierarchy and linking to support SQE Automation	products: invalid values ['sgNIPT']
LOPS-5642	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration environment for LOPS-5542	products: invalid values ['sgNIPT']
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	products: invalid values ['sgNIPT']
LOPS-5624	Task	Closed	Kevin Detweiler	Activity start and end timestamps not populated for hybrid capture and sequencing steps for all cases	products: invalid values ['Signatera WES']
LOPS-5617	Task	Closed	Mehmet Ali Eken	Disable Debug setting on Event Plan	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5616	Task	Closed	Vasilii Sevriugin	Validate User configuration	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5615	Task	Closed	Kevin Detweiler	Commit Changes to DKC-100004 - DKC-100008 and DKC-100014 - DKC-100018 to the repo	products: invalid values ['Signatera WES']
LOPS-5611	Story	Verified	—	Test only: PacBio LRPCR - Record sequencingSampleId to assay attributes	products: invalid values ['sgNIPT']
LOPS-5609	Story	Verified	—	Sequencing Prep: Support Selection of 'Inline QC Valid' Reagents (Test Only)	products: invalid values ['Signatera WES']
LOPS-5598	Defect	Closed	—	The gDNA quantification result does not align with the specified rule conditions.	products: invalid values ['sgNIPT']
LOPS-5594	Story	Verified	Alex Pakhunov	Illumina NGS - Record sequencingSampleId to assay attributes	products: invalid values ['sgNIPT']
LOPS-5593	Story	Verified	Kathy Dao	Plasma isolation calculation updates	products: invalid values ['sgNIPT']
LOPS-5584	Task	Closed	Ariel Jirau	Fix broken "Integration Test" Step on Gitlab Pipeline Testing Stage for Kubernetes Branch Labworkflows	products: invalid values ['Other']
LOPS-5583	Defect	Verified	Ize Imai	Plate load query for gDNA Pre-extraction is incorrect	products: invalid values ['sgNIPT']
LOPS-5575	Story	Verified	Olawale Dada	Plasma isolation and cfDNA Extraction MD updates for Runlog (Runlog Headers)	products: invalid values ['sgNIPT']
LOPS-5573	Defect	Verified	Michael Livingston	gDNA LR-PCR Pool Process is not automatically applied after gDNA LR-PCR Process is Completed.	products: invalid values ['sgNIPT']
LOPS-5562	Story	Verified	Ray Ward	Update End Repair Array method to add cfDNA controls in the correct positions	products: invalid values ['sgNIPT']
LOPS-5555	Story	Verified	Leonid Garin	Update sequencingSampleId sent in sgNIPT HC sequencing manifest	products: invalid values ['sgNIPT']
LOPS-5554	Task	Closed	Leonid Garin	Investigate use of sdidataid of samples in sgNIPT gDNA Sequencing Run Test Method as unique identifier (sequencingSample	products: invalid values ['sgNIPT']
LOPS-5542	Defect	Closed	Alex Pakhunov	Page gets stuck during manual child sample creation in Histopathology	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5529	Defect	Verified	Klead Fusha	sgNIPT cfDNA LibAmp Purification Runlog cannot be processed	products: invalid values ['sgNIPT']
LOPS-5519	Task	Closed	Ariel Jirau	Add k8s liveness probe to restart pod in case of invalid EAR File	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5514	Defect	Verified	Michael Livingston	lr-pcr-pb-v0 Assay Template is missing "Gene" column and "Support Gene Routing" check box.	products: invalid values ['sgNIPT']
LOPS-5492	Story	Verified	Leonid Garin	LR-PCR Send unique sequencingSampleId in the sequencing manifest to Pipelines	products: invalid values ['sgNIPT']
LOPS-5487	Story	Verified	Sri Gorantla	Update calculations for Partial Isolation parameter test to capture correct parameter	products: invalid values ['sgNIPT']
LOPS-5486	Defect	Verified	Meghana Joshi	WESX assay QC pages is broken - missing Complete Review, Array Genealogy, approval/rejection buttons	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5476	Story	Verified	Krishna Tanuku	Update SourcePosition entry for End Repair worklist to remove "0" between the row and column for the tube position	products: invalid values ['sgNIPT']
LOPS-5468	Task	Closed	Hani Yakan	Investigation of the configuration of the "intf_lops_user" LOPS user	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5465	Story	Verified	Vasilii Sevriugin	Configure deduplication of pipeline-result messages	products: invalid values ['sgNIPT']
LOPS-5462	Story	Verified	Isaac Vargas	cfDNA PostLig Transfer Worklist Policy Configuration and MD updates	products: invalid values ['sgNIPT']
LOPS-5442	Defect	Verified	Michael Livingston	Plate calculations for gDNA Extraction quant are incorrect	products: invalid values ['sgNIPT']
LOPS-5413	Task	Closed	Vasilii Sevriugin	Recovery of the changes for LOPS-4627	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5405	Story	Verified	Leonid Garin	Update which outputs are being recorded to assay from pipeline result json (HC, Alg)	products: invalid values ['sgNIPT']
LOPS-5376	Story	Verified	Lev Evstratov	new Quant Result Processor - gDNA extraction quantification result runlog processing	products: invalid values ['sgNIPT']
LOPS-5363	Story	Verified	Gianna Bell-Eunice	cfDNA PostLib Quant Plating - Worklist Generation	products: invalid values ['sgNIPT']
LOPS-5288	Story	Verified	Leonid Garin	Extraction Batch Runlog Processing	products: invalid values ['sgNIPT']
LOPS-5256	Story	Verified	Vasilii Sevriugin	Add Okta authentication to establish a secure connection between LOPS and LOPS-PIPE Connector	products: invalid values ['Other', 'sgNIPT']
LOPS-5246	Story	Verified	Leonid Garin	PacBio LR-PCR - Invocation of Sequence Manifest when the Sequencing Run Complete message is processed	products: invalid values ['sgNIPT']
LOPS-5238	Story	Verified	Monish Grover	Hybrid Capture Day 2 Capture Worklist Generation	products: invalid values ['sgNIPT']
LOPS-5236	Task	Closed	—	Create Confluence Page for Interview Questions and Process	products: empty
LOPS-5186	Story	Verified	Michael Livingston	Updates needed for sample result evaluation and spec for gDNA extraction quant	products: invalid values ['sgNIPT']
LOPS-5151	Story	Verified	Ize Imai	Create reagents importer process in LOPS	products: invalid values ['sgNIPT']
LOPS-5055	Story	Verified	Olawale Dada	Remove calculations for cfDNA PostLib quant and update master data	products: invalid values ['sgNIPT']
LOPS-5014	Story	Verified	Gianna Bell-Eunice	Samples that have been plated once are not able to be loaded onto other plates	products: invalid values ['sgNIPT']
LOPS-4939	Story	Verified	Meghana Joshi	Support for the PD assay when there are multiple source samples for the sequencing assays	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4933	Story	Verified	Valeria Vargas	LOPS Verso Store Runlog	products: invalid values ['sgNIPT']
LOPS-4906	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (3 of 3 - Control Results)	products: invalid values ['sgNIPT']
LOPS-4905	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (2 of 3 - Sample Results)	products: invalid values ['sgNIPT']
LOPS-4870	Story	Verified	Leonid Garin	Ability to assign multiplier variables on gDNA primer plates	products: invalid values ['sgNIPT']
LOPS-4621	Story	Verified	Mai Ton-Nu	Add additional required Reagents for GHP workflow to the init reagents script	products: invalid values ['Signatera GHP']
LOPS-4611	Story	Verified	Michael Livingston	gDNA Normalization worklist generation	products: invalid values ['sgNIPT']
LOPS-4204	Task	Closed	—	Change LOPS User Timeout Threshold to Release Licenses and Connections	products: empty
LOPS-4102	Story	Verified	Olawale Dada	gDNA LR-PCR Primer plate setup (CFTR)	products: invalid values ['sgNIPT']
LOPS-4032	Story	Verified	Sri Gorantla	cfDNA Barcode Primer Plate plate maps updates - consumable type	products: invalid values ['sgNIPT']
LOPS-3975	Story	Verified	Mikhail Terpugov	LOPS Verso Retrieve runlog processing	products: invalid values ['sgNIPT']
LOPS-2804	Defect	Verified	Meghana Joshi	WES Sequencing - Flowcell single use is not being validated	products: invalid values ['Signatera WES']
LOPS-2801	Story	Verified	Gianna Bell-Eunice	gDNA Library Prep Worklist Generation	products: invalid values ['sgNIPT']
LOPS-2731	Story	Verified	Vadim Gusev	PacBio LRPCR - Assay Disposition Handling in the Pipeline Results processing (LRPCR Pipe Result 3 of 3)	products: invalid values ['sgNIPT']
LOPS-2705	Story	Verified	Brandon Culver	cfDNA Sequencing Prep (pool quant and dilution) worklist generation	products: invalid values ['sgNIPT']
LOPS-2678	Story	Verified	Lev Evstratov	gDNA extraction quantification M200 result runlog processing	products: invalid values ['sgNIPT']
LOPS-2538	Story	Verified	Monish Grover	Plasma Isolation instrument integration - Worklist Generation	products: invalid values ['sgNIPT']
LOPS-2529	Story	Verified	Michael Livingston	cfDNA Extraction worklist generation	products: invalid values ['sgNIPT']
LOPS-2507	Story	Verified	Vadim Gusev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3)	products: invalid values ['sgNIPT']
LOPS-2270	Story	Verified	Alex Pakhunov	Trigger Alg pipeline via REST API	products: invalid values ['sgNIPT']
LOPS-1533	Story	Verified	Vadim Gusev	Add processor of LRPCR pipeline-result message (LRPCR Pipe Result 1 of 3)	products: invalid values ['sgNIPT']

LOPS Sprint 20250127 (35) (76 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8656	Story	Opened	Kevin Detweiler	CLONE - WES: Disposal for Sample in Blood Rack	products: invalid values ['Signatera WES']
LOPS-7164	Task	Closed	Ariel Jirau	Request certificate for sgNIPT Prod domain	products: empty
LOPS-5835	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 37	products: invalid values ['sgNIPT']
LOPS-5621	Task	Closed	Gianna Bell-Eunice	Clean up JAMA TestScripts hierarchy	products: invalid values ['sgNIPT']
LOPS-5612	Task	Closed	Kevin Detweiler	Prod: Investigate creation of duplicate incidents	products: invalid values ['Signatera WES']
LOPS-5610	Task	Closed	Kathy Dao	KD Demo Prep Sprint 19 (35)	products: invalid values ['sgNIPT']
LOPS-5599	Defect	Closed	Meghana Joshi	Unable to create 15mL PLM Falcon tube child samples for multiple samples upon completion of QC Batch	products: invalid values ['sgNIPT']
LOPS-5587	Task	Closed	Ariel Jirau	Fix broken config server integration on Kubernetes branch	products: invalid values ['Other']
LOPS-5582	Defect	Closed	Krishna Tanuku	Worklist generation is not supported for the Array Method: AM - sgNIPT cfDNA PostLig Purification - 1	products: invalid values ['sgNIPT']
LOPS-5574	Tweak	Verified	Mikhail Makarin	Add sgNIPT and tfMRD assay codes to LOPS assay code filter	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5571	Task	Closed	Matt Smith	Create RO Database User in LOPS Prod for Kevin	products: empty
LOPS-5570	Task	Closed	Kevin Detweiler	Investigation: User observed error in Prod when uploading Blood Extraction Rundata with Sample with 'Invalid' Result (A1	products: invalid values ['Signatera WES']
LOPS-5569	Task	Closed	Kevin Detweiler	Investigation of Root Cause for Block at Blood Extraction Results Review (A12-BDNA)	products: invalid values ['Signatera WES']
LOPS-5566	Task	Closed	Monish Grover	Deploy latest sgNIPT release to sgnipt-integration-02 environment	products: invalid values ['sgNIPT']
LOPS-5564	Task	Closed	Klead Fusha	Investigation: Blood Extraction Results Review: Not required to log exception for samples with 'valid' and 'unclear' res	products: invalid values ['Signatera WES']
LOPS-5553	Task	Closed	Alex Pakhunov	Update python scripts to address latest changes for toDo list	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5549	Task	Closed	Hani Yakan	Change Natera's Export for users to include force update	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5534	Defect	Verified	Meghana Joshi	Automatically Reject/Unreject well in QC Review Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5528	Task	Closed	Alex Pakhunov	Transactions are postponed for hours	products: invalid values ['sgNIPT']
LOPS-5526	Story	Verified	Michael Livingston	Restore gene routing config to assay template in LOPS	products: invalid values ['sgNIPT']
LOPS-5521	Task	Closed	Ariel Jirau	Set "Validate Kafka Schemas" Gitlab pipeline validate stage step to manual to avoid failing the release pipeline	products: empty
LOPS-5510	Task	Closed	Swati Giri	Deploy LOPS-1.1.0.0 to the G64 demo environment	products: invalid values ['Signatera GHP']
LOPS-5508	Task	Closed	—	Merge the LOPS 1.1.1.0 (M6) branch into LOPS 1.1.2.0 (M7)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5507	Tweak	Verified	Vasilii Sevriugin	ARM transaction missing "lops.filter.assaycode" after M6 merge	products: invalid values ['Other']
LOPS-5505	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 19 (35)	products: invalid values ['sgNIPT']
LOPS-5503	Sub-task	Closed	Alex Pakhunov	Script (submit_seq_run_complete_message.py) doesn't post request to pipeline	products: invalid values ['sgNIPT']
LOPS-5502	Sub-task	Closed	Alex Pakhunov	Failed to update transaction status from Scheduled to InProcess	products: invalid values ['sgNIPT']
LOPS-5500	Defect	Closed	Michael Livingston	Calculated values disappear after "Save" button is clicked in Array Zone Data Entry.	products: invalid values ['sgNIPT']
LOPS-5493	Task	Closed	Ariel Jirau	K8S: Assay requests are not processed due to decryption issue	products: invalid values ['Signatera CLIA']
LOPS-5470	Task	Closed	Ron Enson	Re-export RunLogConfigPolicy with export script	products: invalid values ['sgNIPT']
LOPS-5459	Task	Closed	—	LOPS 1.1.1.0 automated testing: Platform	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5458	Task	Closed	—	LOPS 1.1.1.0 automated testing: WGS	products: invalid values ['Signatera GHP']
LOPS-5446	Sub-task	Closed	Klead Fusha	Perform Wes On X verifications	products: invalid values ['Signatera WES']
LOPS-5444	Defect	Closed	Ize Imai	Errors when generating End Repair worklists	products: invalid values ['sgNIPT']
LOPS-5420	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS - additional RefDataCatalog updates	products: invalid values ['sgNIPT']
LOPS-5411	Story	Verified	Monish Grover	Creation of cfDNA controls in LOPS and plate layout update for cfDNA downstream steps	products: invalid values ['sgNIPT']
LOPS-5403	Tweak	Verified	Ize Imai	Update sgNIPT Verso Retrieve DestPosition Query for Row Major Orientation	products: invalid values ['sgNIPT']
LOPS-5379	Tweak	Verified	Vasiliy Kumaev	Rack to plate transfer for cfDNA LibPrep End Repair runlog parsing	products: invalid values ['sgNIPT']
LOPS-5377	Story	Verified	Leonid Garin	SampleExtractionRunDataProcessor code update for cfDNA Extraction Runlog Processing	products: invalid values ['sgNIPT']
LOPS-5375	Task	Closed	Mehmet Ali Eken	Create Spring Profiles for PSPC Environments	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5371	Defect	Closed	Klead Fusha	Transfer cannot be completed for sgNIPt cfDNA LibAmp Pur to PostLib Quant TM	products: invalid values ['sgNIPT']
LOPS-5369	Tweak	Verified	Vasilii Sevriugin	Update sgNIPT SequenceRunCompleteEvent classes to allow LOPS-owned param naming	products: invalid values ['sgNIPT']
LOPS-5361	Task	Closed	Swati Giri	LOPS 1.1.10 (M6) Deployment - g64e2e-01 env	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5352	Story	Verified	Ize Imai	LOPS Standalone Sample worklist generation	products: invalid values ['sgNIPT']
LOPS-5344	Task	Closed	—	Run regression for G64 merge to Develop	products: empty
LOPS-5319	Story	Verified	Leonid Garin	Update ReTriggerPipe sql query to search for the old and new attribute types for assayRequestDependencies	products: invalid values ['sgNIPT']
LOPS-5293	Tweak	Closed	Krishna Tanuku	Update AM - sgNIPT cfDNA Library EDTA node title	products: invalid values ['sgNIPT']
LOPS-5283	Defect	Closed	—	Primer Design assay request message is not being processed successfully	products: invalid values ['sgNIPT']
LOPS-5271	Story	Verified	Ize Imai	Update/create user role to have access to "Mix Consumable" button	products: invalid values ['sgNIPT']
LOPS-5255	Defect	Verified	Krishna Tanuku	sgNIPT cfDNA Sequencing Run array method params type should be = Standard, not Raw Value	products: invalid values ['sgNIPT']
LOPS-5210	Story	Verified	Vasilii Sevriugin	Add integration with Cloud Config to support S3 Client configuration	products: invalid values ['sgNIPT']
LOPS-5200	Story	Verified	Sri Gorantla	Additional validation for slide pooling	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5181	Story	Closed	Klead Fusha	Configure NtrWorklistGeneratorTask to differentiate Quant and Post-Quant steps	products: invalid values ['sgNIPT']
LOPS-5153	Story	Verified	Krishna Tanuku	cfDNA Group Test method reorganization and Assay Template update	products: invalid values ['sgNIPT']
LOPS-4999	Task	Closed	Ron Enson	Re-export the maint element and the pages so samples do not inherit duplicated fields	products: empty
LOPS-4957	Story	Verified	Kevin Detweiler	WES: Disposal for Sample in Blood Rack	products: invalid values ['Signatera WES']
LOPS-4904	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (1 of 3 - General, RunResults)	products: invalid values ['sgNIPT']
LOPS-4863	Task	Closed	Brandon Culver	Investigate cfDNA Rework Scenario Handling	products: invalid values ['sgNIPT']
LOPS-4855	Defect	Verified	Ray Ward	User friendly message should be displayed when system shall prevent boxes with duplicate barcodes from being created.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4784	Defect	Closed	Meghana Joshi	Child sample is not visible in unfiltered search (using Magnifier Button) in "Samples - Manage" tramstop	products: invalid values ['Signatera WES']
LOPS-4601	Task	Closed	Ariel Jirau	Configure Gitlab repositories permission to ensure alignment with gitlab self-service deployment guidelines	products: empty
LOPS-4580	Tweak	Verified	Sri Gorantla	Hide Buttons from All Users	products: invalid values ['Signatera WES']
LOPS-4570	Story	Verified	Lev Evstratov	The system must support Plate to Rack arraytransfermethods	products: invalid values ['sgNIPT']
LOPS-4040	Story	Verified	Vadim Gusev	Add processor of Alg Pipeline pipeline-result message (Alg Pipe Result 1 of 3)	products: invalid values ['sgNIPT']
LOPS-3983	Task	Closed	Mehmet Ali Eken	Update LOPS Prod Display Name and Make Java Memory Configurable from Config Server	products: empty
LOPS-3936	Task	Closed	—	QC Review Page - Policy and Task Based - replace array_qc_review.js	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3885	Tweak	Verified	Hani Yakan	Update "By Tissue Batch" to "By Batch"	products: invalid values ['sgNIPT']
LOPS-3801	Story	Verified	Michael Livingston	gDNA downstream assay template updates	products: invalid values ['sgNIPT']
LOPS-3783	Story	Verified	Lev Evstratov	Copy action for transfer array action and sample template use for aliquot/derivative/pool sample creation	products: invalid values ['sgNIPT']
LOPS-3418	Story	Verified	Kevin Detweiler	Add assay info to sample list page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3135	Story	Verified	Ize Imai	Make Container Type Visible during use of Array Transfer Method	products: invalid values ['sgNIPT']
LOPS-2772	Story	Verified	Vadim Gusev	sgNIPT Algorithm- Implement ability to process metric output file (Alg Pipe Result 2 of 3)	products: invalid values ['sgNIPT']
LOPS-2771	Story	Verified	Vadim Gusev	sgNIPT Algorithm - Assay Disposition Handling in the Pipeline Results processing (Alg Pipe Result 3 of 3)	products: invalid values ['sgNIPT']
LOPS-2727	Story	Verified	Vadim Gusev	Handle Pipe Job Errors	products: invalid values ['sgNIPT']
LOPS-2649	Story	Closed	—	Test cfDNA Downstream assay rework points	products: invalid values ['sgNIPT']
LOPS-1651	Story	Verified	Leonid Garin	The system shall have the the ability to process the SamLog Kafka message and the required data will be captured in the	products: invalid values ['sgNIPT']

LOPS Sprint 20250113 (34) (69 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8657	Story	Opened	Kevin Detweiler	CLONE - WES: Create Blood Racks	products: invalid values ['Signatera WES']
LOPS-5471	Task	Closed	Gianna Bell-Eunice	Deploy latest sgNIPT release into Sandbox environment	products: invalid values ['sgNIPT']
LOPS-5457	Task	Closed	—	LOPS 1.1.1.0 automated testing: WES	products: invalid values ['Signatera WES']
LOPS-5449	Task	Closed	—	Provide Report for WGS Matching Samples	products: invalid values ['Signatera GHP']
LOPS-5439	Defect	Closed	Brad Garrett	WGS Download consolidation worklist triggers an error	products: invalid values ['Signatera GHP']
LOPS-5422	Task	Closed	Alex Pakhunov	DevTools: support multiple genes for lrPCR seq array	products: invalid values ['sgNIPT']
LOPS-5421	Task	Closed	Alex Pakhunov	DevTools: automatically create HybCap seq array for lrPCR	products: invalid values ['sgNIPT']
LOPS-5412	Defect	Verified	Gianna Bell-Eunice	"AM - sgNIPT gDNA Pre-Extraction - 1" Policy node has Sample configuration.	products: invalid values ['sgNIPT']
LOPS-5381	Defect	Verified	Gianna Bell-Eunice	"sgNIPT cfDNA Library Amplification" Worklist can be generated for 3 plates.	products: invalid values ['sgNIPT']
LOPS-5355	Story	Verified	Gianna Bell-Eunice	Update node name TM (Rack) - sgNIPT gDNA Pre-Extraction - 1	products: invalid values ['sgNIPT']
LOPS-5347	Defect	Verified	Olawale Dada	Array transfer method "sgNIPt cfDNA LibAmp Pur to PostLib Quant array" cannot be completed.	products: invalid values ['sgNIPT']
LOPS-5345	Story	Verified	Gianna Bell-Eunice	Addition of concentration parameter to LPCR pool	products: invalid values ['sgNIPT']
LOPS-5342	Defect	Closed	—	Wes On X: Capture QC Review: Reject - Error when rerunning pools from Histo & BE	products: invalid values ['Signatera WES']
LOPS-5341	Task	Closed	Klead Fusha	Test-only: WGS library re-quant button	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5340	Story	Closed	—	Test only - Inline-QC for Sequencing Steps	products: invalid values ['Signatera GHP']
LOPS-5336	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 18 (34)	products: invalid values ['sgNIPT']
LOPS-5334	Story	Verified	Monish Grover	Update array layout for HBA and CFTR to Add standard	products: invalid values ['sgNIPT']
LOPS-5327	Task	Closed	Klead Fusha	LOPS production deployment - Version 1.1.0.1 (Hotfix 6)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5317	Story	Verified	Monish Grover	cfDNA library prep updates - CF Negative control zone addition, sample type updates	products: invalid values ['sgNIPT']
LOPS-5316	Defect	Closed	Swati Giri	Wes On X - WesDeparaffinization QC Batch Edit page can't be rendered	products: invalid values ['Signatera WES']
LOPS-5310	Story	Verified	Gianna Bell-Eunice	Update param type for gDNA Sequencing Run array method	products: invalid values ['sgNIPT']
LOPS-5301	Tweak	Verified	Michael Livingston	Create DFD for import of Primer plate maps	products: invalid values ['sgNIPT']
LOPS-5290	Task	Closed	Alex Pakhunov	Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	products: invalid values ['sgNIPT']
LOPS-5289	Story	Verified	Mikhail Makarin	PacPbio LRPCR - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete mess	products: invalid values ['sgNIPT']
LOPS-5285	Task	Closed	Mikhail Makarin	Update CODEOWNERS permissions	products: empty
LOPS-5281	Task	Closed	Mikhail Makarin	Upload Previous Version of OverOps for Web Containers	products: empty
LOPS-5257	Task	Closed	Vasilii Sevriugin	Update unit tests to reflect changes for SamRep Kafka and API contracts	products: invalid values ['Other']
LOPS-5253	Defect	Verified	Gianna Bell-Eunice	Duplicated sgNIPT cfDNA Sequencing Run/sgNIPT cfDNA Sequence Run array methods	products: invalid values ['sgNIPT']
LOPS-5251	Sub-task	Closed	Vasilii Sevriugin	keh_lops user needs READ permissions for events.pipeline.workflow.result.v2	products: invalid values ['sgNIPT']
LOPS-5247	Task	Reopened	Leonid Garin	Investigate. Remove or mask PHI/PII information from LOPS logs	products: invalid values ['Other']
LOPS-5219	Defect	Closed	—	Incorrect Source Array Type for sgNIPT cfDNA LibAmp to PostLib Quant Transfer Method	products: invalid values ['sgNIPT']
LOPS-5130	Tweak	Verified	Sri Gorantla	Sample List Page: Group/Order WES Menus	products: invalid values ['Signatera WES']
LOPS-5129	Tweak	Verified	Sri Gorantla	Plate List Page: Group/Order WES Menus	products: invalid values ['Signatera WES']
LOPS-5110	Defect	Verified	Lev Evstratov	Error Message when selecting 'Grid with Params for Reagent IQC' view in Data Entry grid	products: invalid values ['Other']
LOPS-5107	Story	Verified	Kevin Detweiler	WES: Create Blood Racks	products: invalid values ['Signatera WES']
LOPS-5062	Defect	Closed	Ize Imai	ExceptionCodeList page not displaying correctly for BloodExtractionSampleResultReview and QCREviewFailedSamples task de	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5056	Defect	Closed	Brad Garrett	RedoCalculations Action is overloading ToDoList	products: invalid values ['Signatera GHP']
LOPS-5045	Story	Verified	Olawale Dada	Updates to LibAmp Pur to PostLib Quant transfer method	products: invalid values ['sgNIPT']
LOPS-5005	Story	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue 2 (batchId and gene)	products: invalid values ['sgNIPT']
LOPS-4985	Story	Verified	Vasiliy Kumaev	Propagate Child Sample Barcode during auto Sample pooling	products: invalid values ['sgNIPT']
LOPS-4965	Task	Closed	—	SQE Regression of sgNIPT After Big Merge	products: empty
LOPS-4927	Story	Closed	Leonid Garin	SamRep update exclusions	products: invalid values ['Signatera WES']
LOPS-4896	Story	Verified	Mikhail Makarin	Save patient source sample to the assay when processing assay requests on derivative samples	products: invalid values ['sgNIPT']
LOPS-4883	Task	Closed	Meghana Joshi	Merge LOPS-G64-Launch back into Develop	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4816	Tweak	Verified	Lev Evstratov	Update QCBatchItemLookup to display 'Request ID'	products: invalid values ['sgNIPT']
LOPS-4814	Story	Verified	Leonid Garin	Update Assay Request message processing to parse assayRequestDependencies from requestParams section of new schema versi	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-4798	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS	products: invalid values ['sgNIPT']
LOPS-4782	Story	Closed	Brad Garrett	Process tissue filler samples for WGS	products: invalid values ['Signatera GHP']
LOPS-4781	Story	Closed	Brad Garrett	Process blood filler samples for WGS	products: invalid values ['Signatera GHP']
LOPS-4780	Task	Closed	Alex Pakhunov	Run a script to trigger updates for existing reagent lots with San Carlos department in LOPS	products: invalid values ['Signatera WES']
LOPS-4749	Defect	Closed	Meghana Joshi	"Fail Assay" button should not work for Assay having "Initial" Status	products: invalid values ['Signatera WES']
LOPS-4746	Story	Verified	Ize Imai	Consolidate Assay QC buttons on the Array and Historical Array List pages	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-4677	Story	Verified	Michael Livingston	Updates to PostLib Quant specfications Master Data updates	products: invalid values ['sgNIPT']
LOPS-4667	Story	Verified	Gianna Bell-Eunice	gDNA Pre-extraction and Extraction worklist generation	products: invalid values ['sgNIPT']
LOPS-4588	Tweak	Closed	Mikhail Makarin	Determine Long Term Solution for LOPS-4190. Create a default user with base department	products: invalid values ['Signatera WES']
LOPS-3911	Story	Verified	Monish Grover	Updates for sgNIPT Algorithm assay (Dry Lab Only) - Array method, and array layout	products: invalid values ['sgNIPT']
LOPS-3758	Story	Closed	Kevin Detweiler	Capture QC Review: Support QC Report	products: invalid values ['Signatera WES']
LOPS-3757	Story	Closed	Kevin Detweiler	Library QC Review: Support QC Report	products: invalid values ['Signatera WES']
LOPS-3746	Story	Verified	Vasiliy Kumaev	Build Plasma Isolation instrument Runlog Processor	products: invalid values ['sgNIPT']
LOPS-3672	Story	Closed	Kevin Detweiler	Extraction QC Review: Support QC Report	products: invalid values ['Signatera WES']
LOPS-3531	Story	Verified	Leonid Garin	Have the ability to record pipeline outputs (file paths) from pipeline result (HC, Alg)	products: invalid values ['sgNIPT']
LOPS-3292	Story	Closed	Swati Giri	WES: Blood Extraction Re-Run: Display 'Blood Extraction Run Number' for Blood Samples Queued for Blood Extraction	products: invalid values ['Signatera WES']
LOPS-2728	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Assay Disposition Handling in the Pipeline Results processing (HC Pipe Result 3 of 3)	products: invalid values ['sgNIPT']
LOPS-2657	Task	Closed	Vadim Gusev	Implement access to s3 data	products: invalid values ['sgNIPT']
LOPS-2506	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, excluding controls)	products: invalid values ['sgNIPT']
LOPS-2470	Story	Verified	Vasiliy Kumaev	LOPS Verso Pick/Retrieve worklist generation	products: invalid values ['sgNIPT']
LOPS-2230	Story	Verified	Meghana Joshi	Create validation for single-use flow cells	products: invalid values ['Signatera WES']
LOPS-1760	Task	Closed	Mikhail Makarin	Get new schema in Repository (POJO, JSON Schema, Etc)	products: empty
LOPS-1535	Story	Verified	Vadim Gusev	Add processor of Hybrid Capture Pipeline pipeline-result message (HC Pipe Result 1 of 3)	products: invalid values ['sgNIPT']

sgNIPT Sprint 9 (25) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3839	Task	Closed	Kathy Dao	Investigation into samples from completed QC batches option	products: invalid values ['sgNIPT']
LOPS-3836	Story	Closed	Laura Dietrick	Updates for sample type gDNA	products: invalid values ['sgNIPT']
LOPS-3835	Task	Closed	Jonathan Quinn	Add unit conversions, create pM (picomolar) and nM (nanomolar) units	products: invalid values ['sgNIPT']
LOPS-3739	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 9 (25)	products: invalid values ['sgNIPT']
LOPS-3698	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (25)	products: invalid values ['sgNIPT']
LOPS-3695	Task	Closed	Kathy Dao	sgNIPT gDNA Extraction Demo Preparation	products: invalid values ['sgNIPT']
LOPS-2722	Story	Verified	Jonathan Quinn	Library Amplification Purification Array transfer method	products: invalid values ['sgNIPT']
LOPS-2712	Story	Verified	Jonathan Quinn	Capture wash/amp/purification (Day 2) array transfer method	products: invalid values ['sgNIPT']
LOPS-2653	Story	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (24)	products: invalid values ['sgNIPT']
LOPS-2596	Story	Verified	Jonathan Quinn	Library Amplification Purification array method	products: invalid values ['sgNIPT']
LOPS-2594	Story	Verified	Monish Grover	Capture wash/Amp/Pool Purification (Day 2) array method	products: invalid values ['sgNIPT']
LOPS-2593	Story	Verified	Jonathan Quinn	Pooling/Hybridization (Day 1) array method	products: invalid values ['sgNIPT']
LOPS-2590	Story	Verified	Laura Dietrick	cfDNA Library Prep group test method	products: invalid values ['sgNIPT']
LOPS-2433	Story	Verified	Monish Grover	Capture Wash/Amplification (Day 2) test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2432	Story	Verified	Krishna Tanuku	Pooling/Hybridization (Day 1) test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2425	Story	Verified	Laura Dietrick	PostLib Quantification array transfer method	products: invalid values ['sgNIPT']
LOPS-2416	Story	Verified	Laura Dietrick	Library amplification purification test method and parameter list	products: invalid values ['sgNIPT']

sgNIPT Sprint 8 (24) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3619	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 8 (24)	products: invalid values ['sgNIPT']
LOPS-3618	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 8 (24)	products: invalid values ['sgNIPT']
LOPS-3378	Story	Verified	Kathy Dao	sgNIPT Plasma Master Data Updates	products: invalid values ['sgNIPT']
LOPS-2664	Story	Verified	Krishna Tanuku	Updates to Isolation Assay Template - add group and standard test methods	products: invalid values ['sgNIPT']
LOPS-2595	Story	Verified	Jonathan Quinn	Post ligation purification array transfer method	products: invalid values ['sgNIPT']
LOPS-2539	Story	Verified	Kathy Dao	sgNIPT Plasma Process group test method	products: invalid values ['sgNIPT']
LOPS-2430	Story	Verified	Jonathan Quinn	Library Amplification array transfer method	products: invalid values ['sgNIPT']
LOPS-2426	Story	Verified	Monish Grover	Post Library Quantification test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2275	Story	Closed	Kathy Dao	KD Ticket Design work - Sprint 8 (24)	products: invalid values ['sgNIPT']

sgNIPT Sprint 7 (23) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3344	Tweak	Verified	Laura Dietrick	Update external IDs for cfDNA, gDNA, Plasma sample types in sgNIPT Master Data	products: invalid values ['sgNIPT']
LOPS-3302	Task	Closed	Kathy Dao	Plasma Demo Prep Sprint 7 (23)	products: invalid values ['sgNIPT']
LOPS-2725	Story	Verified	Jonathan Quinn	gDNA Extraction to Quant Array Transfer Method	products: invalid values ['sgNIPT']
LOPS-2721	Story	Verified	Krishna Tanuku	gDNA Quant Array Master Data	products: invalid values ['sgNIPT']
LOPS-2720	Story	Verified	Jonathan Quinn	gDNA Extraction Array Master Data	products: invalid values ['sgNIPT']
LOPS-2582	Story	Verified	Monish Grover	Library amplification array method	products: invalid values ['sgNIPT']
LOPS-2581	Story	Verified	Jonathan Quinn	Post ligation purification array method	products: invalid values ['sgNIPT']
LOPS-2542	Story	Verified	Jonathan Quinn	LibPrep End Repair, A-tailing, Ligation, EDTA addition array method	products: invalid values ['sgNIPT']
LOPS-2540	Story	Verified	Krishna Tanuku	gDNA downstream assay template	products: invalid values ['sgNIPT']
LOPS-2418	Story	Verified	Monish Grover	cfDNA downstream assay template	products: invalid values ['sgNIPT']
LOPS-2415	Story	Verified	Monish Grover	Library amplification test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2414	Story	Verified	Monish Grover	Post ligation purification test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2360	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 7 (23)	products: invalid values ['sgNIPT']
LOPS-2357	Story	Verified	Laura Dietrick	SDI Group Test Method	products: invalid values ['sgNIPT']

sgNIPT Sprint 6 (22) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3303	Task	Closed	Kathy Dao	Plasma/Reagent Mix Demo Prep (22)	products: invalid values ['sgNIPT']
LOPS-2723	Story	Verified	Jonathan Quinn	gDNA PEXT to EXT Array Transfer Method	products: invalid values ['sgNIPT']
LOPS-2663	Story	Verified	Jonathan Quinn	gDNA Normalization test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2565	Story	Verified	Laura Dietrick	gDNA Extraction Process group test method	products: invalid values ['sgNIPT']
LOPS-2493	Story	Verified	Laura Dietrick	gDNA Pre-extraction array method	products: invalid values ['sgNIPT']
LOPS-2465	Story	Verified	Monish Grover	gDNA Extraction Quant test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2359	Task	Closed	Kathy Dao	KD ticket design - Sprint 6 (22)	products: invalid values ['sgNIPT']
LOPS-2358	Story	Verified	Kathy Dao	LibPrep End Repair, A Tailing, Ligation and EDTA test method and parameter list	products: invalid values ['sgNIPT']

sgNIPT Sprint 5 (21) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2933	Story	Verified	Monish Grover	Plasma Isolation Manual Recovery Test Method and ParameterList	products: invalid values ['sgNIPT']
LOPS-2661	Story	Verified	Kathy Dao	Updates to parameter list for gDNA pre-extraction test method	products: invalid values ['sgNIPT']
LOPS-2651	Story	Verified	Jonathan Quinn	cfDNA Extraction QC Method	products: invalid values ['sgNIPT']
LOPS-2579	Story	Verified	Jonathan Quinn	gDNA Extraction test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2562	Story	Verified	Krishna Tanuku	gDNA Pre-extraction reagents	products: invalid values ['sgNIPT']
LOPS-2527	Story	Verified	Laura Dietrick	Child plasma sample template (for cfDNA extraction)	products: invalid values ['sgNIPT']
LOPS-2417	Task	Closed	Kathy Dao	Spike Task for Library Prep SLIB1 Design	products: invalid values ['sgNIPT']
LOPS-2388	Story	Verified	Laura Dietrick	Isolation child plasma test method and parameter	products: invalid values ['sgNIPT']
LOPS-2277	Story	Verified	Jonathan Quinn	cfDNA extraction test method and parameter list	products: invalid values ['sgNIPT']

sgNIPT Sprint 4 (20) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2929	Task	Closed	Kathy Dao	sgNIPT Support, Design, WOW Organization Sprint 4	products: invalid values ['sgNIPT']
LOPS-2908	Task	Closed	Jonathan Quinn	Remove Austin from Site on gDNA sample template	products: invalid values ['sgNIPT']
LOPS-2647	Story	Verified	Laura Dietrick	sgNIPT Blood Process Group Test Method	products: invalid values ['sgNIPT']

sgNIPT Sprint 3 (19) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2849	Task	Closed	Kathy Dao	sgNIPT Support, Design, WOW Organization	products: invalid values ['sgNIPT']
LOPS-2626	Story	Closed	—	Child gDNA sample template	products: invalid values ['sgNIPT']
LOPS-2577	Story	Verified	Laura Dietrick	Child cfDNA sample template	products: invalid values ['sgNIPT']
LOPS-2454	Story	Verified	Jonathan Quinn	ParamList addition to sgNIPTIsolation Test Method	products: invalid values ['sgNIPT']

sgNIPT Sprint 2 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2464	Story	Verified	Jonathan Quinn	gDNA Pre-extraction test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2276	Story	Verified	Laura Dietrick	Isolation QC Method configuration	products: invalid values ['sgNIPT']

sgNIPT Sprint 16 (32) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5163	Defect	Verified	Kathy Dao	Test Method sgNIPT Plasma Manual Process‎ is not configured properly.	products: invalid values ['sgNIPT']
LOPS-5146	Task	Closed	—	Revert basedepartment field on admin Sysuser to null	products: invalid values ['sgNIPT']
LOPS-5133	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 16 (32)	products: invalid values ['sgNIPT']
LOPS-5106	Task	Closed	—	Investigation into cfDNA pool quantification calculation	products: invalid values ['sgNIPT']
LOPS-5076	Defect	Verified	Monish Grover	sgNIPT gDNA Extraction Quantification parameter's values are not calculated.	products: invalid values ['sgNIPT']
LOPS-5043	Defect	Closed	Gianna Bell-Eunice	Plasma Isolation processing fails for Re-run and Manual Isolation Evaluation	products: invalid values ['sgNIPT']
LOPS-5011	Tweak	Verified	Monish Grover	sgNIPT gDNA Sequencing Run array method is missing parameters	products: invalid values ['sgNIPT']
LOPS-4983	Task	Closed	Kathy Dao	Update/check calculations gsheet for sgNIPT processes	products: invalid values ['sgNIPT']
LOPS-4980	Story	Verified	Gianna Bell-Eunice	gDNA Sequencing Prep final loading dilution array method	products: invalid values ['sgNIPT']
LOPS-4743	Story	Verified	Laura Dietrick	Isolation assay template updates	products: invalid values ['sgNIPT']
LOPS-3956	Story	Verified	Krishna Tanuku	cfDNA downstream assay template updates - add remaining test methods	products: invalid values ['sgNIPT']
LOPS-3913	Story	Verified	Monish Grover	Updates to cfDNA PostLig Purification step - add/remove transfer methods, etc	products: invalid values ['sgNIPT']
LOPS-2578	Story	Verified	Monish Grover	Updates for gDNA Extraction Quantification specification	products: invalid values ['sgNIPT']

sgNIPT Sprint 15 (31) (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5027	Defect	Closed	—	Unable to promote results for sgNIPT cfDNA Library Prep A-Tailing array method	products: invalid values ['sgNIPT']
LOPS-5026	Defect	Verified	Kathy Dao	Incorrect control layout for cfDNA Library Prep and cfDNA LibAmp Purification array layouts	products: invalid values ['sgNIPT']
LOPS-5003	Story	Verified	Monish Grover	cfDNA Library Prep End Repair parameter list Update	products: invalid values ['sgNIPT']
LOPS-5002	Story	Verified	Michael Livingston	gDNA Library Prep Group Test Method	products: invalid values ['sgNIPT']
LOPS-4990	Tweak	Verified	Laura Dietrick	Import sgNIPT reagents into the repository Part 2	products: invalid values ['sgNIPT']
LOPS-4979	Story	Verified	Olawale Dada	gDNA Sequencing Prep final loading dilution test method and param list	products: invalid values ['sgNIPT']
LOPS-4970	Story	Verified	Monish Grover	gDNA Sequencing Prep Array Transfer Methods	products: invalid values ['sgNIPT']
LOPS-4943	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 15 (31)	products: invalid values ['sgNIPT']
LOPS-4893	Story	Verified	Gianna Bell-Eunice	PL/SPEC Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	products: invalid values ['sgNIPT']
LOPS-4876	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 31)	products: invalid values ['sgNIPT']
LOPS-4865	Story	Verified	Olawale Dada	LR-PCR Pool Purification Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-4864	Story	Verified	Olawale Dada	gDNA array transfer method updates: Pool Tapestation Quant and Library Prep	products: invalid values ['sgNIPT']
LOPS-4800	Story	Verified	Krishna Tanuku	gDNA Sequencing array transfer method	products: invalid values ['sgNIPT']
LOPS-4799	Story	Verified	Olawale Dada	cfDNA sequencing run complete test method	products: invalid values ['sgNIPT']
LOPS-4789	Story	Verified	Krishna Tanuku	Associate sgNIPT cfDNA Capture/Hybridization TMs with sgNIPT cfDNA Capture/Hybridization array methods	products: invalid values ['sgNIPT']
LOPS-4744	Story	Verified	Olawale Dada	Plasma Isolation TM and QC Method updates	products: invalid values ['sgNIPT']
LOPS-4674	Story	Verified	Kathy Dao	cfDNA library prep updates - Positive, negative control position updates	products: invalid values ['sgNIPT']
LOPS-4557	Story	Verified	Olawale Dada	Update Plasma Isolation and Manual Isolation Sample Template and Group Test Methods	products: invalid values ['sgNIPT']
LOPS-4195	Tweak	Verified	Krishna Tanuku	Remove hidden, newline character from Assay Template fields	products: invalid values ['sgNIPT']
LOPS-4083	Story	Verified	Michael Livingston	gDNA LR-PCR Primer plate setup (HBB)	products: invalid values ['sgNIPT']
LOPS-2797	Story	Verified	Olawale Dada	LR-PCR Quantification array method	products: invalid values ['sgNIPT']
LOPS-2755	Story	Verified	Krishna Tanuku	gDNA LR-PCR array method	products: invalid values ['sgNIPT']
LOPS-2438	Story	Verified	Olawale Dada	gDNA Sequencing Prep array methods	products: invalid values ['sgNIPT']

sgNIPT Sprint 14 (30) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4871	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 14 (30)	products: invalid values ['sgNIPT']
LOPS-4818	Defect	Verified	Kathy Dao	Partial Plasma Isolation parameters don't show the calculation value.	products: invalid values ['sgNIPT']
LOPS-4817	Defect	Verified	Kathy Dao	sgNIPT Plasma Manual Isolation/RunData PL is not populating.	products: invalid values ['sgNIPT']
LOPS-4812	Task	Closed	Laura Dietrick	Support of PSPC Milestone 2 testing (Sprint 30)	products: invalid values ['sgNIPT']
LOPS-4786	Task	Closed	Kathy Dao	Reagent part number identification for cfDNA master MM-00004- MM0021mix recipes	products: invalid values ['sgNIPT']
LOPS-4747	Story	Verified	Laura Dietrick	Update calculation for gDNA Pool tapestation to be on quant plate	products: invalid values ['sgNIPT']
LOPS-4742	Story	Verified	Gianna Bell-Eunice	Updates to ER, A-tailing, and ligation array methods (Master Mix updates)	products: invalid values ['sgNIPT']
LOPS-4737	Story	Verified	Laura Dietrick	Create new child cfDNA sample template and add container type	products: invalid values ['sgNIPT']
LOPS-4111	Story	Verified	Laura Dietrick	gDNA Pool Tapestation Quantification array transfer method	products: invalid values ['sgNIPT']
LOPS-3889	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number set up (MM0001-MM0003)	products: invalid values ['sgNIPT']
LOPS-2754	Story	Verified	Krishna Tanuku	Pool quantification Array Method and Transfer Method	products: invalid values ['sgNIPT']
LOPS-2744	Story	Verified	Keith Ngolley [X]	Sequencing Prep Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2738	Story	Verified	Krishna Tanuku	gDNA Final loading dilution array method (gDNA Sequence Pool Dilution)	products: invalid values ['sgNIPT']
LOPS-2695	Story	Verified	Gianna Bell-Eunice	Sequencing Run Complete message Master Data (gDNA)	products: invalid values ['sgNIPT']
LOPS-2623	Story	Verified	Gianna Bell-Eunice	Updates for plasma manual isolation, partial isolation/norm	products: invalid values ['sgNIPT']

sgNIPT Sprint 13 (29) (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4785	Task	Closed	Brandon Culver	Update sgNIPt Parameter List File Names in Repository	products: invalid values ['sgNIPT']
LOPS-4727	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 13 (29)	products: invalid values ['sgNIPT']
LOPS-4706	Tweak	Verified	Laura Dietrick	Update Assay template AT-00020 to include "required to complete assay" flags	products: invalid values ['sgNIPT']
LOPS-4676	Story	Verified	Gianna Bell-Eunice	Remove cfDNA Library Quantification step from HybCap Group test method	products: invalid values ['sgNIPT']
LOPS-4671	Story	Verified	Gianna Bell-Eunice	Update gDNA Final Loading Dilution Test Method and Parameter List names to gDNA Sequence Pool Dilution	products: invalid values ['sgNIPT']
LOPS-4652	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 29)	products: invalid values ['sgNIPT']
LOPS-4222	Task	Closed	—	Create a manual test script for sgNIPT gDNA Normalization	products: invalid values ['sgNIPT']
LOPS-4220	Task	Closed	—	Create a manual test script for sgNIPT gDNA Extraction	products: invalid values ['sgNIPT']
LOPS-4219	Task	Closed	—	Create a manual test script for Perform sgNIPT gDNA Pre-Extraction	products: invalid values ['sgNIPT']
LOPS-4218	Task	Closed	—	Create a manual test script for Perform sgNIPT cfDNA Extraction	products: invalid values ['sgNIPT']
LOPS-4217	Task	Closed	—	Create a manual test script for Perform sgNIPT Plasma Isolation	products: invalid values ['sgNIPT']
LOPS-4161	Defect	Verified	—	Transfer method sgNIPT cfDNA Capture to Pool Quant cannot be performed due to Level Zone naming conflict	products: invalid values ['sgNIPT']
LOPS-4125	Story	Verified	Olawale Dada	gDNA SDI Group Test Method (LR-PCR Barcoding)	products: invalid values ['sgNIPT']
LOPS-4057	Task	Closed	Kathy Dao	Reagent part number identification for cfDNA master mix recipes	products: invalid values ['sgNIPT']
LOPS-3977	Story	Verified	Gianna Bell-Eunice	Nuclease treatment array method	products: invalid values ['sgNIPT']
LOPS-2796	Story	Verified	Monish Grover	LR-PCR Quantification array transfer methods	products: invalid values ['sgNIPT']
LOPS-2625	Story	Verified	Laura Dietrick	LR-PCR Pooling Array Transfer Methods	products: invalid values ['sgNIPT']
LOPS-2599	Story	Verified	Laura Dietrick	gDNA Repair, A-tailing, Adapter Ligation array methods	products: invalid values ['sgNIPT']
LOPS-2575	Story	Verified	Keith Ngolley [X]	cfDNA Barcode Primer Plate plate maps	products: invalid values ['sgNIPT']
LOPS-2563	Story	Verified	Olawale Dada	gDNA Final Loading Dilution Test Method and Parameter List	products: invalid values ['sgNIPT']

sgNIPT Sprint 12 (28) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4650	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 28)	products: invalid values ['sgNIPT']
LOPS-4626	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration environment	products: invalid values ['sgNIPT']
LOPS-4593	Defect	Closed	—	"sgNIPT gDNA Library Prep": Test result for the "No" value is not populating	products: invalid values ['sgNIPT']
LOPS-4235	Sub-task	Closed	—	sgNIPT gDNA Normalization	products: empty
LOPS-4234	Sub-task	Closed	—	sgNIPT gDNA Extraction Quantification	products: empty
LOPS-4227	Story	Verified	—	Create testcases with sgNIPT Assay-00041 Happy Path	products: invalid values ['sgNIPT']
LOPS-4215	Task	Closed	—	Create a manual test script for Submit Sample and Assign Assay	products: invalid values ['sgNIPT']
LOPS-4212	Task	Closed	—	Create a manual test script for Creating Racks	products: invalid values ['sgNIPT']
LOPS-4206	Task	Closed	—	Create lots for testing of reagent validation api	products: invalid values ['sgNIPT']
LOPS-4202	Task	Closed	—	Create a manual test script for Receiving a consumable lot	products: invalid values ['sgNIPT']
LOPS-4173	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 12 (28)	products: invalid values ['sgNIPT']
LOPS-4099	Task	Closed	Olawale Dada	Import sgNIPT reagents into the repository	products: invalid values ['sgNIPT']
LOPS-4084	Task	Closed	Kathy Dao	SPIKE: Investigation into gDNA LR-PCR quant pooling calculation	products: invalid values ['sgNIPT']
LOPS-3976	Story	Verified	Gianna Bell-Eunice	Nuclease treatment test method and parameter list	products: invalid values ['sgNIPT']
LOPS-2665	Story	Verified	Laura Dietrick	LR-PCR Pooling Array method	products: invalid values ['sgNIPT']
LOPS-2605	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2598	Story	Verified	Gianna Bell-Eunice	gDNA Repair/A-tailing, adapter ligation test methods and parameter lists	products: invalid values ['sgNIPT']
LOPS-2564	Story	Verified	Kathy Dao	gDNA Library Prep initial transfer method (pool to well)	products: invalid values ['sgNIPT']
LOPS-2434	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification array method	products: invalid values ['sgNIPT']

sgNIPT Sprint 11 (27) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4165	Task	Closed	Monish Grover	Spike Task: Calculation for samples, controls, Standards belonging in two different plates that is combined into 1 Plate	products: invalid values ['sgNIPT']
LOPS-4081	Tweak	Verified	Olawale Dada	Updates to Pooling/Hyb (Day 1) array transfer method	products: invalid values ['sgNIPT']
LOPS-4072	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 11 (27)	products: invalid values ['sgNIPT']
LOPS-4064	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 11 (27)	products: invalid values ['sgNIPT']
LOPS-4056	Story	Verified	Olawale Dada	Updates for LR-PCR Pooling test method and parameter list	products: invalid values ['sgNIPT']
LOPS-3974	Task	Closed	Kathy Dao	sgNIPT User Guide updates	products: invalid values ['sgNIPT']
LOPS-3912	Story	Verified	Laura Dietrick	cfDNA library prep updates - control/array layout update,	products: invalid values ['sgNIPT']
LOPS-2997	Story	Verified	Jonathan Quinn	Pooling/Hyb (Day 1) Array Transfer Method	products: invalid values ['sgNIPT']
LOPS-2692	Story	Verified	Laura Dietrick	Sequencing Run Complete message Master Data (cfDNA)	products: invalid values ['sgNIPT']
LOPS-2584	Story	Verified	Krishna Tanuku	gDNA LR-PCR Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2580	Story	Verified	Monish Grover	gDNA LR-PCR Quantification Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2436	Story	Verified	Monish Grover	Pool Dilution Array Method and Transfer Method	products: invalid values ['sgNIPT']
LOPS-2315	Story	Verified	Laura Dietrick	Create Dry Lab only assay template	products: invalid values ['sgNIPT']

sgNIPT Sprint 10 (26) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4044	Task	Closed	Krishna Tanuku	SPIKE: Investigation into supporting multiple unknowns in quant steps (gDNA Ext Quant and cfDNA Pool Quant)	products: invalid values ['sgNIPT']
LOPS-4012	Task	Closed	Monish Grover	SPIKE: Investigation into LR-PCR Pooling Array Method	products: invalid values ['sgNIPT']
LOPS-3951	Story	Verified	Jonathan Quinn	Create new array layout for Array method sgNIPT cfDNA LibAmp Purification	products: invalid values ['sgNIPT']
LOPS-3910	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 10 (26)	products: invalid values ['sgNIPT']
LOPS-3909	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 10 (26)	products: invalid values ['sgNIPT']
LOPS-3887	Story	Verified	Jonathan Quinn	Updates for cfDNA Library Prep Quantification - add specification	products: invalid values ['sgNIPT']
LOPS-3838	Task	Closed	Kathy Dao	Investigation into carryover of plasma volume from parent sample to support partial isolation/normalization	products: invalid values ['sgNIPT']
LOPS-3832	Story	Verified	Kathy Dao	Update Master data for gDNA Extraction Demo	products: invalid values ['sgNIPT']
LOPS-3469	Story	Verified	Monish Grover	cfDNA downstream assay template updates	products: invalid values ['sgNIPT']
LOPS-2592	Story	Verified	Laura Dietrick	LR-PCR Pooling Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2591	Story	Verified	Krishna Tanuku	cfDNA Hybrid Capture group test method	products: invalid values ['sgNIPT']
LOPS-2437	Story	Verified	Laura Dietrick	cfDNA Pool Dilution Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2435	Story	Verified	Jonathan Quinn	Pool Quantification Test Method and Parameter List	products: invalid values ['sgNIPT']
LOPS-2428	Story	Verified	Monish Grover	cfDNA Post Library Quantification array method	products: invalid values ['sgNIPT']

sgNIPT Sprint 1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2380	Story	Verified	Jonathan Quinn	Iso/Ext Assay Template configuration	products: invalid values ['sgNIPT']
LOPS-2263	Story	Verified	Jonathan Quinn	Isolation test method and param list	products: invalid values ['sgNIPT']

WESonX Sprint 32 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5209	Task	Closed	Kevin Detweiler	Update intf_lops_user to enable Force Update flag	products: empty
LOPS-4851	Story	Closed	Kevin Detweiler	Associate 'Candidate for Tissue Re-Work' from 'Tissue Block' on 'Tissue Extraction Sample'	products: invalid values ['Signatera WES']
LOPS-4666	Defect	Closed	Swati Giri	Wes On X: Capture QC Review: Reject - QC Failed Pool samples have WESCaptureQuantWorkflow TM in InProgress status	products: invalid values ['Signatera WES']
LOPS-4115	Story	Closed	Kevin Detweiler	Capture QC Review: Update 'Plate-Level Pool QC'	products: invalid values ['Signatera WES']

WESonX Sprint 31 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5020	Story	Closed	Kevin Detweiler	WES: Access for Lab Ops User (Test Only)	products: invalid values ['Signatera WES']
LOPS-5019	Story	Closed	Kevin Detweiler	WES: Access for Extraction User (Test Only)	products: invalid values ['Signatera WES']

WESonX Sprint 30 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4868	Task	Closed	Mai Ton-Nu	Update NR0701 reagent type in repository	products: invalid values ['Signatera WES']
LOPS-4692	Defect	Closed	Mai Ton-Nu	Wes On X: Capture Quant Task - Add unit for concentrations and update field labels	products: invalid values ['Signatera WES']

WESonX Sprint 29 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4773	Task	Closed	—	WES: Support Manual Re-Run for Library Prep Plate from Histopathology	products: invalid values ['Signatera WES']
LOPS-4771	Task	Closed	—	Run regression testing for M3 build (Wes on X)	products: invalid values ['Signatera WES']
LOPS-4736	Task	Closed	Swati Giri	Investigation: WES-LOPS: QC batch will not complete tube verification.	products: invalid values ['Signatera WES']
LOPS-4691	Defect	Closed	Michael Livingston	Wes On X: Capture QC Reruns - Tissue sample incidents are missing Department value	products: invalid values ['Signatera WES']
LOPS-4185	Task	Closed	—	LOPS Maintenance 1 - WES-X sandbox deployment	products: empty

WESonX Sprint 28 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4713	Defect	Verified	Ron Enson	Wes On X: Capture Quant QC Review - 'Capture QC Review' button triggers 'Capture Quant' action (Internal Defect)	products: invalid values ['Signatera WES']
LOPS-4696	Task	Closed	Kevin Detweiler	WES on X: Investigate Rack-to-Plate Error	products: invalid values ['Signatera WES']
LOPS-4690	Defect	Closed	Justin Jones	Incorrect sequencer serial number set-up in the production LOPS	products: invalid values ['Signatera GHP']
LOPS-4687	Task	Closed	—	Run regression for M2 - Implementation	products: empty
LOPS-4686	Task	Closed	—	Run regression for hotfix2 - Implementation	products: empty
LOPS-4595	Defect	Closed	Kevin Detweiler	[SIG AU WES-X] Exception in LOPS did not generate TNP in LIMS	products: invalid values ['Signatera WES']
LOPS-4548	Task	Closed	Kevin Detweiler	[SIG AU WES-X] Error trying to push Record Rundata Entered for Fragmentation step.	products: invalid values ['Signatera WES']
LOPS-4547	Task	Closed	Sviatoslav Pastukhov	LOPS Maintenance 1 - WES PSPC environment deployment	products: invalid values ['Signatera WES']
LOPS-4542	Task	Closed	Matt Smith	WES-X Case 40300817.1-1-HNE Needs to move from In progress to Cancelled in LOPS	products: invalid values ['Signatera WES']
LOPS-4214	Task	Closed	Mai Ton-Nu	Assessment of WES-X sample staging automation	products: invalid values ['Signatera WES']
LOPS-3968	Story	Closed	Meghana Joshi	Assay QC Review: Exclude SAMPLE from POOL Re-Run starting from Blood Extraction/Histopathology (Test-Only)	products: invalid values ['Signatera WES']

WESonX Sprint 27 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4225	Defect	Verified	Kevin Detweiler	Hard-coded schema in the isQCBatchEquipmentOk method	products: invalid values ['Signatera WES']
LOPS-4189	Defect	Verified	Meghana Joshi	Capture QC Review Blocked because page is NOT available on Post-Launch Build (Internal Defect)	products: invalid values ['Signatera WES']
LOPS-4164	Defect	Verified	Kevin Detweiler	Blood Samples sent for re-run from 'Capture QC Review' not included in BE Worklist	products: invalid values ['Signatera WES']
LOPS-4086	Defect	Verified	Swati Giri	Capture QC Review: WesCaptureConcentrationTask Update Variables	products: invalid values ['Signatera WES']
LOPS-4079	Defect	Verified	Swati Giri	Wes On X: Tissue Extraction + Library QC Review - Exception samples sample and assay status is InProgress instead of Com	products: invalid values ['Signatera WES']
LOPS-4050	Task	Closed	Swati Giri	WES: Capture QC Review: WesCaptureConcentrationTask Roll back step 15	products: invalid values ['Signatera WES']
LOPS-3941	Sub-task	Closed	Meghana Joshi	Update action to allow promote array results to samples with mandatory params	products: invalid values ['Signatera WES']
LOPS-3689	Story	Verified	Swati Giri	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	products: invalid values ['Signatera WES']
LOPS-3650	Story	Verified	Mikhail Makarin	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	products: invalid values ['Signatera WES']

WESonX Sprint 26 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4110	Defect	Verified	Kevin Detweiler	"Not a Valid Instrument" error when user try to select an instrument in WESSequencingRunDetails	products: invalid values ['Signatera WES']
LOPS-4108	Task	Closed	Swati Giri	Deploy the WesX Launch Branch to the PSPC gspintegration01 environment	products: invalid values ['Signatera WES']
LOPS-4027	Task	Closed	Swati Giri	Samples for Histopathology user practice: Week of 9/30/2024	products: invalid values ['Signatera WES']
LOPS-4016	Story	Verified	Kevin Detweiler	Addition of a "Received Samples" filter	products: invalid values ['Signatera WES']
LOPS-3973	Story	Verified	—	Assay QC Review: Maintain SAMPLE in POOL Re-Run starting from Hybrid Capture/Sequencing Prep (Test-Only)	products: invalid values ['Signatera WES']
LOPS-3972	Defect	Verified	Ron Enson	Wes on X: Sequencing Prep - Flow Cell is double captured in WESSequencingRunDetails TM	products: invalid values ['Signatera WES']
LOPS-3971	Defect	Verified	Meghana Joshi	Wes on X: Capture PCR Cleanup - Intermittent rundata processing error (Failed to create rset for Sample..)	products: invalid values ['Signatera WES']
LOPS-3955	Defect	Verified	Lev Evstratov	Wes On X: Pre-Capture Pooling - Error while processing Pre-Capture Pooling rundata file	products: invalid values ['Signatera WES']
LOPS-3898	Defect	Closed	Lev Evstratov	Wes On X - HYB1 plate remains in Loaded state, filter for Hybridization step will not yield it	products: invalid values ['Signatera WES']
LOPS-3862	Task	Closed	—	Finalize User List for Production - Reagents and Equipment	products: empty
LOPS-3772	Task	Closed	Gianna Bell-Eunice	Document the WES-X test sample creation procedure	products: invalid values ['Signatera WES']
LOPS-3717	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood/Tissue Sample from 'Hybrid Capture' Workflow to 'Sequencing Prep' Workflow (Test-Only)	products: invalid values ['Signatera WES']
LOPS-3688	Story	Closed	Swati Giri	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	products: invalid values ['Signatera WES']
LOPS-3687	Story	Closed	Swati Giri	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	products: invalid values ['Signatera WES']
LOPS-3649	Story	Closed	Meghana Joshi	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	products: invalid values ['Signatera WES']
LOPS-3249	Story	Closed	Meghana Joshi	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	products: invalid values ['Signatera WES']

WESonX Sprint 25 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3900	Defect	Closed	Lev Evstratov	Wes On X - TDNA plate remains in Loaded state, filter for Quant Plating step will not yield it	products: invalid values ['Signatera WES']
LOPS-3886	Defect	Closed	Ron Enson	Wes On X: QC Batches - 'QC Batch Ready for Workflow Step' doesn't work	products: invalid values ['Signatera WES']
LOPS-3873	Defect	Closed	Kevin Detweiler	Anomalous receive/unreceive/validation behavior in Histology	products: invalid values ['Signatera WES']
LOPS-3863	Task	Closed	—	Finalize User List for Production - Histopathology	products: empty
LOPS-3854	Defect	Closed	Swati Giri	Save/Release doesn't complete the case	products: invalid values ['Signatera WES']
LOPS-3853	Task	Closed	Kevin Detweiler	Another set of extraction reagents for the E2E environment	products: invalid values ['Signatera WES']
LOPS-3834	Defect	Verified	Swati Giri	Wes On X - Capture QC Review - WESSequencingRunWorkflow TMs should not be assigned after Capture QC Review	products: invalid values ['Signatera WES']
LOPS-3833	Tweak	Closed	Ron Enson	Wes On X - Capture Quant - Typo in validation message for re-entering concentration should be fixed	products: invalid values ['Signatera WES']
LOPS-3824	Story	Closed	—	WES: Display Received Samples Ready for Tissue Extraction (Test Only)	products: invalid values ['Signatera WES']
LOPS-3800	Task	Closed	Mai Ton-Nu	WES-X workflow practice	products: invalid values ['Signatera WES']
LOPS-3749	Defect	Closed	Kevin Detweiler	Wes On X: Sequencing Prep - Stored transfer volume units are ul instead of uL	products: invalid values ['Signatera WES']
LOPS-3748	Task	Closed	Kevin Detweiler	Samples for Histopathology user practice: Week of 9/16/2024	products: invalid values ['Signatera WES']
LOPS-3743	Task	Closed	—	Investigation of missing workitem during fragmentation (Item 18 on the e2E issues gSheet)	products: invalid values ['Signatera WES']
LOPS-3741	Task	Closed	Kevin Detweiler	Additional extraction reagents for the E2E environment	products: invalid values ['Signatera WES']
LOPS-3716	Story	Closed	Michael Livingston	Assay Cancellation Request: Tissue Sample from 'Tissue Extraction' Workflow to Tissue 'Library Prep' Workflow (Test-Only	products: invalid values ['Signatera WES']
LOPS-3703	Story	Closed	Gianna Bell-Eunice	Sequencing Prep: Update Transfer Volume Table	products: invalid values ['Signatera WES']
LOPS-3699	Tweak	Closed	Michael Livingston	Tissue Extraction: Update Test Method Names and Create New Group Test Method	products: invalid values ['Signatera WES']
LOPS-3646	Defect	Closed	Ron Enson	QC Batch List Page: Consolidate 'Racks Ready for Tube Verification' filter with 'QC Batch Ready for Workflow Step' filte	products: invalid values ['Signatera WES']
LOPS-3644	Defect	Closed	Ron Enson	Wes On X: Tissue Extraction - WesTubeToRack QC Batch status is Initial after Tube-to-Rack step is completed	products: invalid values ['Signatera WES']
LOPS-3641	Task	Closed	Swati Giri	LOPS 1.0.0.0 RC 4 deployment - PSPC environment	products: invalid values ['Signatera WES']
LOPS-3585	Defect	Closed	Olawale Dada	Boxes Page - Remove non-functional 'Tube Verification' button	products: invalid values ['Signatera WES']
LOPS-3472	Defect	Closed	Meghana Joshi	Wes On X - Capture QC Review - TMs has incorrect statuses after Reject action using new Wes Actions - Capture QC Review	products: invalid values ['Signatera WES']
LOPS-3426	Story	Closed	Kevin Detweiler	Extraction/Library/Capture QC Review: Validate Cannot Re-Quant Plate after QC Review is Completed	products: invalid values ['Signatera WES']
LOPS-2350	Task	Closed	Mai Ton-Nu	Migrate Equipment Master data	products: empty
LOPS-2334	Task	Closed	Jennifer Chen	Finalize User List for Production - Extractions, LabOps, BioDev, BioFx, DataScience, EPS	products: empty
LOPS-1452	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood Sample from 'Blood Extraction' Workflow to 'Library Prep' Workflow (Test-Only)	products: invalid values ['Signatera WES']

WESonX Sprint 24 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4774	Task	Closed	—	Remove non-breaking spaces	products: invalid values ['sgNIPT']
LOPS-3788	Story	Closed	—	Assay QC Review: Sequencing Prep Pool Disposal (Test Only)	products: invalid values ['Signatera WES']
LOPS-3713	Task	Closed	—	Run Hybrid Capture WF Happy path with sample cancellation	products: invalid values ['Signatera WES']
LOPS-3712	Task	Closed	—	Run Blood WF Happy path with sample cancellation	products: invalid values ['Signatera WES']
LOPS-3710	Task	Closed	—	Run Tissue WF Happy path with sample cancellation	products: invalid values ['Signatera WES']
LOPS-3685	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Failed TDNA plate samples are not rejected	products: invalid values ['Signatera WES']
LOPS-3667	Defect	Closed	Hani Yakan	Wes On X: Tissue Extraction - 'QC Batch Ready for Workflow Step' filter doesn't display QC Batches ready for Tube-to-Rac	products: invalid values ['Signatera WES']
LOPS-3661	Task	Closed	Michael Livingston	Check reagent class for controls in repo to make sure it doesn't overwrite master data	products: invalid values ['Signatera WES']
LOPS-3658	Task	Closed	Jose Valdivieso	Samples for Histopathology user practice: Week of 9/2/2024	products: invalid values ['Signatera WES']
LOPS-3640	Defect	Closed	—	LOPS worklist unable to be utilized by Biomek	products: invalid values ['Signatera WES']
LOPS-3638	Sub-task	Closed	Kevin Detweiler	TM > WES Blood Extraction incorrectly returns Blood Filler samples along with Whole Blood Samples	products: invalid values ['Signatera WES']
LOPS-3634	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Error generating Normalization worklist	products: invalid values ['Signatera WES']
LOPS-3633	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Completing TDNA plate QC Review doesn't complete WesExtrQuantResult TM	products: invalid values ['Signatera WES']
LOPS-3616	Task	Closed	Kevin Detweiler	Additional reagent creation in the E2E environment	products: invalid values ['Signatera WES']
LOPS-3580	Tweak	Closed	Gianna Bell-Eunice	Display Container barcodes for selected consumables in Run Details: Consumable Chooser Dialog	products: invalid values ['Signatera WES']
LOPS-3578	Tweak	Closed	Gianna Bell-Eunice	Display Container barcodes for selected consumables in QC Batch Details Page	products: invalid values ['Signatera WES']
LOPS-3574	Defect	Closed	Kevin Detweiler	Wes On X: Sequencing Prep - Blood and Tissue pool transfer volumes are not stored	products: invalid values ['Signatera WES']
LOPS-3571	Task	Closed	Gianna Bell-Eunice	Samples for Histopathology user practice: Week of 8/26/2024	products: invalid values ['Signatera WES']
LOPS-3567	Tweak	Closed	Olawale Dada	Plate List View > Support 'WES Actions' Menu	products: invalid values ['Signatera WES']
LOPS-3566	Defect	Closed	Valeria Vargas	Wes On X: Tissue Extraction - Error when running Tube Verification step (Required String 'qcmethodversionid' is null or	products: invalid values ['Signatera WES']
LOPS-3565	Defect	Closed	Kevin Detweiler	Wes On X - 'Samples Ready For Workflow Step' filter can't be used to display patient blood samples	products: invalid values ['Signatera WES']
LOPS-3547	Task	Closed	Liubomyr Skorokhod	PSPC automation updates - LOPS 1.0.0.0 RC 3	products: invalid values ['Signatera WES']
LOPS-3517	Story	Closed	Kevin Detweiler	Sequencing Prep: Remove 2 Reagents	products: invalid values ['Signatera WES']
LOPS-3493	Story	Closed	Michael Livingston	Sequencing Prep: Update Transfer Volume Calculation	products: invalid values ['Signatera WES']
LOPS-3491	Story	Closed	Swati Giri	Sequencing: Update Flowcell ID Validation	products: invalid values ['Signatera WES']
LOPS-3488	Task	Closed	Olawale Dada	Remove non-breaking spaces	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-3482	Story	Closed	Kevin Detweiler	Update Capture Quant Task	products: invalid values ['Signatera WES']
LOPS-3467	Defect	Closed	Swati Giri	Wes On X - Capture QC Review - Re-Quant - An error is displayed for completing review after Re-Quant plate	products: invalid values ['Signatera WES']
LOPS-3456	Story	Closed	Michael Livingston	Update child instruments to have a new instrument model	products: invalid values ['Signatera WES']
LOPS-3336	Story	Closed	Mikhail Makarin	Capture QC Review: Validate 'Capture QC Review' Menu Item is Selected	products: invalid values ['Signatera WES']
LOPS-3285	Story	Closed	Olawale Dada	Support Rare Blood Exceptions	products: invalid values ['Signatera WES']
LOPS-3271	Defect	Closed	Michael Livingston	Parent instrument is available during selection of sequencer instrument	products: invalid values ['Signatera WES']
LOPS-3111	Story	Closed	Swati Giri	Create Normalization Worklist - Test with Canceled Samples	products: invalid values ['Signatera WES']
LOPS-3104	Defect	Closed	Meghana Joshi	Wes On X - Capture Quant QC - Need to fix entering concentrations flow	products: invalid values ['Signatera WES']
LOPS-2998	Tweak	Closed	Michael Livingston	WES: Standardize Group and Individual Test Methods	products: invalid values ['Signatera WES']
LOPS-2646	Story	Closed	Kevin Detweiler	Hybrid Capture Re-Run: Support Filler Samples - Test Only	products: invalid values ['Signatera WES']

WESonX Sprint 23 (38 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3627	Task	Closed	Swati Giri	Manual Post pipeline kafka message	products: invalid values ['Signatera WES']
LOPS-3509	Task	Closed	Swati Giri	Export Sequencing Instrument and Add to Repo	products: empty
LOPS-3484	Defect	Closed	Valeria Vargas	Wes On X: Tissue Extraction - Error when running Tube-to-Rack step (Required String 'qcmethodversionid' is null or empty	products: invalid values ['Signatera WES']
LOPS-3468	Task	Closed	Brad Garrett	Missing sequencer part; incorrect part selected for E2E	products: invalid values ['Signatera WES']
LOPS-3461	Task	Closed	Kevin Detweiler	Map step names between LV1 and LOPS for the IT analytics dashboard. Blood, Tissue	products: invalid values ['Signatera WES']
LOPS-3459	Defect	Closed	Swati Giri	Wes On X - Capture QC Review - ReQuant - An error is displayed for ReQuant with filler samples	products: invalid values ['Signatera WES']
LOPS-3454	Defect	Verified	Mikhail Terpugov	Uploading for Capture PCRCleanup Rundata throws error	products: invalid values ['Signatera WES']
LOPS-3438	Defect	Closed	Michael Livingston	Wes On X: Library Prep - Worklist "Process Type" value is incorrect	products: invalid values ['Signatera WES']
LOPS-3420	Story	Closed	Michael Livingston	WES: Support 3-Character Format for Source Well across Worklists	products: invalid values ['Signatera WES']
LOPS-3417	Task	Closed	—	E2E Sample Staging: Additional Accessioning & Histology Test Scenarios	products: invalid values ['Signatera RUO']
LOPS-3415	Defect	Closed	Lev Evstratov	Wes On X - Error creating a Sequence Manifest for a pool with fillers	products: invalid values ['Signatera WES']
LOPS-3402	Defect	Closed	Mikhail Makarin	Capture QC Review - Number of patient samples include filler	products: invalid values ['Signatera WES']
LOPS-3398	Defect	Closed	Kevin Detweiler	Tissue Extraction Review Page doesn't display	products: invalid values ['Signatera WES']
LOPS-3383	Task	Closed	Swati Giri	Error uploading an extraction quant plating run data file	products: invalid values ['Signatera WES']
LOPS-3382	Task	Closed	Kersha Eddy	Missing Kingfisher instrument in the E2E environment	products: invalid values ['Signatera WES']
LOPS-3381	Defect	Verified	Meghana Joshi	Wes On X - Capture QC Review - Reject - An error is displayed for completing review after Reject plate	products: invalid values ['Signatera WES']
LOPS-3379	Task	Closed	Kevin Detweiler	LOPS/WES X UAT Preparation - Assay QC and rerun Tissue	products: invalid values ['Signatera WES']
LOPS-3370	Story	Closed	Meghana Joshi	Blood Extraction Results Review: Support 'Sample Status'	products: invalid values ['Signatera WES']
LOPS-3361	Sub-task	Closed	—	Remove redundant "Sub Type" column from BERR table	products: invalid values ['Signatera WES']
LOPS-3321	Defect	Closed	Klead Fusha	WES on X: BERR - Fail & re-extract: missing 'samples to confirm list page' in the fail & re-extract workflow	products: invalid values ['Signatera WES']
LOPS-3320	Defect	Closed	Klead Fusha	WES on X: BERR - Log exception & Fail assay: incorrect steps order in the log exception workflow	products: invalid values ['Signatera WES']
LOPS-3253	Task	Closed	—	Not Including “Example/Test Data” During Install	products: invalid values ['Signatera WES']
LOPS-3251	Tweak	Closed	Kevin Detweiler	Reagent Barcode only visible to administrators	products: invalid values ['Signatera WES']
LOPS-3217	Tweak	Closed	Kevin Detweiler	Histopath - TM Descriptions in the Assay Template Updated to Match the TM Descriptions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3214	Story	Closed	Meghana Joshi	Update Sample Status to Completed for Re-Run Samples Scheduled for Blood Extraction/Histopathology	products: invalid values ['Signatera WES']
LOPS-3186	Story	Closed	Kevin Detweiler	WES: Support Filter to Display WES Blood/Tissue Samples for 'Sample Receipt'	products: invalid values ['Signatera WES']
LOPS-3132	Story	Closed	Swati Giri	Histopath - reconcile test method (Workitem Description)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3112	Story	Closed	Swati Giri	Create Pre-Capture Pooling Worklist - Test with Canceled Samples	products: invalid values ['Signatera WES']
LOPS-3100	Tweak	Closed	Michael Livingston	Standardize 'Array Method' and 'Array Layout'	products: invalid values ['Signatera WES']
LOPS-3035	Story	Closed	Monish Grover	Support Instrument Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	products: invalid values ['Signatera WES']
LOPS-2952	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Samples and controls status doesn't change to "Stored"	products: invalid values ['Signatera WES']
LOPS-2589	Defect	Closed	Mikhail Terpugov	Capture QC Review - Need to change the name of Pooled Samples to Pools	products: invalid values ['Signatera WES']
LOPS-2396	Tweak	Closed	Swati Giri	Update PRO-0017032 Test method/parameter list	products: invalid values ['Signatera WES']
LOPS-2203	Defect	Closed	Swati Giri	QC Batches List Page -Displayed 'Number of Patient Samples' value is incorrect	products: invalid values ['Signatera WES']
LOPS-1954	Story	Closed	Monish Grover	Support Reagent Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	products: invalid values ['Signatera WES']
LOPS-1839	Story	Closed	Michael Livingston	Track Input/Output Plate Barcodes in Automated Run Details - Extraction Quant	products: invalid values ['Signatera WES']
LOPS-1566	Story	Closed	Michael Livingston	Tissue Extraction 1 > Min/Max Thresholds for Tissue Samples	products: invalid values ['Signatera WES']
LOPS-1474	Story	Closed	Mikhail Makarin	Process Blood Filler Samples	products: invalid values ['Signatera WES']

WESonX Sprint 22 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3419	Task	Closed	—	Wes On X Test Cases and Automation Status Cleanup & Actualization	products: invalid values ['Signatera WES']
LOPS-3352	Task	Closed	Kersha Eddy	Instrument configuration for E2E testing	products: invalid values ['Signatera WES']
LOPS-3328	Defect	Closed	Meghana Joshi	Wes on X: Capture PCR Cleanup - Error when processing plates that were requanted in Lib Quant	products: invalid values ['Signatera WES']
LOPS-3275	Task	Closed	Matt Smith	LOPS 1.0.0.0 RC 2 deployment - PSPC environment	products: empty
LOPS-3273	Defect	Closed	Mikhail Makarin	Plate with blood filler failed after Fragmentation has been performed	products: invalid values ['Signatera WES']
LOPS-3269	Tweak	Closed	—	Missing Sonicators in assorted environments	products: invalid values ['Signatera WES']
LOPS-3268	Story	Closed	Kevin Detweiler	Display ‘Number of Passed Samples/Pools’ at Extraction/Library/Capture QC Review	products: invalid values ['Signatera WES']
LOPS-3180	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Tissue Samples	products: invalid values ['Signatera WES']
LOPS-3165	Tweak	Closed	Kevin Detweiler	Update: Create Blood/Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-3074	Story	Verified	Michael Livingston	Capture QC Review: Display Blood/Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-3073	Story	Closed	Michael Livingston	Library QC Review: Display Blood/Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-3072	Story	Closed	Mikhail Terpugov	Blood Extraction Results Review: Display Filler Samples	products: invalid values ['Signatera WES']
LOPS-3063	Story	Closed	Swati Giri	QC Batch List Page: Display Filler Samples	products: invalid values ['Signatera WES']
LOPS-3060	Story	Closed	Meghana Joshi	Include Timestamp, Location, and Username in Blood Extraction Worklist File Name	products: invalid values ['Signatera WES']
LOPS-2954	Defect	Closed	Klead Fusha	Extraction QC Review - Accept partial: Failed Samples Page doesn't have all necessary columns	products: invalid values ['Signatera WES']
LOPS-2824	Story	Closed	—	Sequencing Prep Re-Run: Support Filler Samples - Test Only	products: invalid values ['Signatera WES']
LOPS-2688	Defect	Closed	Mikhail Terpugov	Wes On X: Blood Extraction - Recording of 'Blood Extraction' Run Details is not enforced/tracked	products: invalid values ['Signatera WES']
LOPS-2643	Story	Closed	Klead Fusha	WES: Standardize Group Test Methods	products: invalid values ['Signatera WES']
LOPS-2603	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains required columns	products: invalid values ['Signatera WES']
LOPS-2394	Defect	Closed	—	Capture Quant - Run Details - Rename Reagent name on Consumable Chooser Dialog	products: invalid values ['Signatera WES']
LOPS-1711	Tweak	Closed	Michael Livingston	Array List Page: Update Columns, 'Array Method Description', and 'Array Layout Description'	products: invalid values ['Signatera WES']
LOPS-1475	Story	Closed	Mikhail Makarin	Process Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-1473	Story	Closed	Mikhail Makarin	Sample List View: Display Blood/Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-1472	Story	Closed	Kevin Detweiler	Create Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-1456	Story	Closed	Michael Livingston	Extraction QC Review: Display Blood/Tissue Filler Samples	products: invalid values ['Signatera WES']
LOPS-1250	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Verify Tissue Samples on Rack	products: invalid values ['Signatera WES']

WESonX Sprint 21 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3238	Defect	Closed	Klead Fusha	Wes On X: BERR - Infinite spinner when logging exceptions	products: invalid values ['Signatera WES']
LOPS-3215	Defect	Closed	Klead Fusha	Wes On X: Quant Plating - Error processing rundata file (Array method null is not applied)	products: invalid values ['Signatera WES']
LOPS-3176	Story	Closed	Klead Fusha	WES: Support Received Samples for Tissue Extraction	products: invalid values ['Signatera WES']
LOPS-3134	Story	Closed	Klead Fusha	WES: Support Received Samples for Blood Extraction	products: invalid values ['Signatera WES']
LOPS-3130	Task	Closed	Kathy Dao	Support Onboarding and Histopathology	products: empty
LOPS-3123	Defect	Closed	Swati Giri	WES on X - 'Basic Search' for Box Barcode on the Rack/Box List Page doesn't work	products: invalid values ['Signatera WES']
LOPS-3096	Task	Closed	Klead Fusha	WES: Support Sample Receipt (Investigation)	products: invalid values ['Signatera WES']
LOPS-2900	Story	Closed	Matt Smith	Support Exceptions for Assay QC Review	products: invalid values ['Signatera WES']
LOPS-2893	Story	Closed	Kevin Detweiler	Blood Extraction Worklist: Support Blood Filler Samples	products: invalid values ['Signatera WES']
LOPS-2883	Defect	Closed	Mikhail Makarin	Wes On X: Quant Concentration Calculation - Negative .XY5 values are rounded incorrectly	products: invalid values ['Signatera WES']
LOPS-2856	Story	Closed	Matt Smith	Create Normalization Worklist - Test with Exception Samples	products: invalid values ['Signatera WES']
LOPS-2855	Story	Closed	Matt Smith	Create Pre-Capture Pooling Worklist - Test with Exception Samples	products: invalid values ['Signatera WES']
LOPS-2847	Defect	Closed	—	WES on X: Tissue Extraction QC Review - Log exception action - List of possible exceptions has not applicable options fo	products: invalid values ['Signatera WES']
LOPS-2691	Defect	Closed	Klead Fusha	Wes On X: BERR - Completion of BERR step is not mandatory	products: invalid values ['Signatera WES']
LOPS-2550	Defect	Closed	—	WES on X: BERR - List of possible exceptions has not applicable options for blood	products: invalid values ['Signatera WES']
LOPS-2442	Story	Closed	Matt Smith	Support Tissue Exceptions for Assay Workflow	products: invalid values ['Signatera WES']
LOPS-2441	Story	Closed	—	Support Blood Exceptions for Assay Workflow	products: invalid values ['Signatera WES']
LOPS-2142	Tweak	Closed	Kevin Detweiler	Tissue Extraction Workflow: QC Batch List View > Support 'WES Actions' Menu	products: invalid values ['Signatera WES']
LOPS-1710	Tweak	Closed	Swati Giri	Plate List Page: Order Options in 'Download WES Worklist' and 'Upload WES Rundata'	products: invalid values ['Signatera WES']
LOPS-1574	Defect	Closed	Meghana Joshi	Wes On X: BERR - Error Descriptions are not displayed for samples with more than one Error Code	products: invalid values ['Signatera WES']
LOPS-1471	Story	Closed	Kevin Detweiler	Create Blood Filler Samples	products: invalid values ['Signatera WES']
LOPS-1463	Story	Closed	Kevin Detweiler	Tissue Extraction 1 > Select Tissue Samples > Display Filler Samples, Display Columns	products: invalid values ['Signatera WES']
LOPS-1287	Story	Closed	Klead Fusha	Tissue Extraction 1 > Select Tissue Samples: Add Control 'Reagent' to QC Batch as Required	products: invalid values ['Signatera WES']
LOPS-1251	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Select Rack	products: invalid values ['Signatera WES']
LOPS-1224	Story	Closed	Mikhail Terpugov	Sample List Page: Display Columns for Samples	products: invalid values ['Signatera WES']

WESonX Sprint 20 (81 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3390	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 5 Blood Workflow	products: invalid values ['Signatera WES']
LOPS-3389	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 6 - Blood	products: invalid values ['Signatera WES']
LOPS-3388	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 4 - Blood	products: invalid values ['Signatera WES']
LOPS-3387	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 3 Blood Workflow	products: invalid values ['Signatera WES']
LOPS-3386	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 2 Blood Workflow	products: empty
LOPS-3385	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 1 Blood Workflows	products: invalid values ['Signatera WES']
LOPS-3270	Task	Closed	Michael Livingston	Adding the missing sonicators to assorted environments	products: invalid values ['Signatera WES']
LOPS-3266	Tweak	Closed	Swati Giri	Update the Histology job type with AssayDisposition Role	products: invalid values ['Signatera WES']
LOPS-3246	Tweak	Closed	Swati Giri	Add the missing negative control sample type	products: invalid values ['Signatera WES']
LOPS-3213	Sub-task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, PIPE-7/8/9/10	products: invalid values ['Signatera WES']
LOPS-3212	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 6 - Tissue	products: invalid values ['Signatera WES']
LOPS-3211	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 5 Tissue Workflow	products: invalid values ['Signatera WES']
LOPS-3210	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 4 - Tissue	products: invalid values ['Signatera WES']
LOPS-3209	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 3 Tissue Workflow	products: invalid values ['Signatera WES']
LOPS-3208	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 2 Tissue Workflow	products: empty
LOPS-3207	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 1, Tissue Workflows	products: invalid values ['Signatera WES']
LOPS-3206	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path	products: empty
LOPS-3188	Task	Closed	—	Creation of the Run 2 - 6 samples for WES-X E2E testing	products: invalid values ['Signatera WES']
LOPS-3187	Task	Closed	—	Creation of the Run 1 samples for WES-X E2E testing	products: invalid values ['Signatera WES']
LOPS-3179	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Blood Samples	products: invalid values ['Signatera WES']
LOPS-3177	Task	Closed	Michael Livingston	Missing sequencer(s) in the wes-e2e-01 environment	products: invalid values ['Signatera WES']
LOPS-3173	Task	Closed	Michael Livingston	Manual correction of the tissue primer plate map in the E2E RC 1 deployment	products: invalid values ['Signatera WES']
LOPS-3170	Tweak	Closed	Mikhail Makarin	Wes on X: QC Review - Controls that failed QC are not displayed as Rejected in Plate Map UI	products: invalid values ['Signatera WES']
LOPS-3169	Story	Closed	Michael Livingston	WES: Update Tissue Primer Plate Map	products: invalid values ['Signatera WES']
LOPS-3168	Defect	Closed	Michael Livingston	Wes On X - 'Arrays Completed Workflow Step' doesn't display Status=Reviewed plates	products: invalid values ['Signatera WES']
LOPS-3167	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Reject) - Assign incident to Histopathology Department = ATX Histopath COMM	products: invalid values ['Signatera WES']
LOPS-3166	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Accept Partial) - Incorrect sample id is displayed for new incident after ru-run	products: invalid values ['Signatera WES']
LOPS-3162	Defect	Closed	—	Incorrect sequencing barcodes for Positive Control	products: invalid values ['Signatera WES']
LOPS-3161	Defect	Closed	Leonid Garin	Incorrect well location used for primer lookup	products: invalid values ['Signatera WES']
LOPS-3159	Task	Closed	Swati Giri	Creation of a set of samples for self-guided user testing	products: invalid values ['Signatera WES']
LOPS-3158	Sub-task	Closed	Kevin Detweiler	Tissue Workflow Demo Prep	products: empty
LOPS-3157	Sub-task	Closed	—	Blood Workflow	products: empty
LOPS-3156	Task	Closed	—	LOPS/WES X UAT Preparation - E2E Demo	products: invalid values ['Signatera WES']
LOPS-3149	Task	Closed	Deon Hughes	Missing Negative control Sample Type in the gsp-integration-01 environment	products: invalid values ['Signatera WES']
LOPS-3129	Defect	Closed	—	Optional form fields on WesBloodExtractionRunDetails are disabled from taking user input	products: invalid values ['Signatera WES']
LOPS-3126	Defect	Closed	Matt Smith	LOPS can't process accessioning event from bridge	products: invalid values ['Signatera WES']
LOPS-3124	Defect	Closed	Michael Livingston	Missing sequencer(s) configuration during deployment	products: invalid values ['Signatera WES']
LOPS-3109	Defect	Closed	Michael Livingston	Wes On X: Sequencing - Arrays Completed Workflow Step doesn't display SEQ plates	products: invalid values ['Signatera WES']
LOPS-3099	Defect	Closed	Meghana Joshi	Library QC Review -Fail plate Action> Sample status doesn't change to stored and Controls status stays valid	products: invalid values ['Signatera WES']
LOPS-3088	Task	Closed	—	E2E User Documentation - LOPS 1.0.0.0 RC 1, Happy Path	products: empty
LOPS-3087	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 1, Happy Path	products: empty
LOPS-3085	Defect	Closed	—	Capture QC Review: Fail Plate and Re-Run - Samples and controls status doesn't change to "Stored"	products: invalid values ['Signatera WES']
LOPS-3080	Task	Closed	—	Extend happy path test automation script to support user's e2e scenarios	products: invalid values ['Signatera WES']
LOPS-3078	Task	Closed	—	Align the LOPS Build Zero deployments for PSPC	products: empty
LOPS-3040	Defect	Closed	Swati Giri	Arrays page -> Searching by Arrays id isn't working	products: invalid values ['Signatera WES']
LOPS-2994	Task	Closed	—	WES: Define Users and Access	products: invalid values ['Signatera WES']
LOPS-2993	Story	Closed	Brad Garrett	WES: Support Histopathology Rework Incident	products: invalid values ['Signatera WES']
LOPS-2975	Defect	Closed	Brad Garrett	WES on X: Library QC Review > Partial Accept > Create a Histopathology Rework Incident for every Tissue Sample	products: invalid values ['Signatera WES']
LOPS-2974	Defect	Closed	Brad Garrett	WES on X: Library QC Review > Partial Accept > Confirmation message isn't shows sample barcode(s)	products: invalid values ['Signatera WES']
LOPS-2953	Defect	Closed	Klead Fusha	There is an Error when sending NOT failed Blood Library Amplification Plate (WLP2) to Re-Run	products: invalid values ['Signatera WES']
LOPS-2951	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow s	products: invalid values ['Signatera WES']
LOPS-2942	Defect	Closed	Klead Fusha	Extraction QC Review: Fail Plate and Re-Run Tissue - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow	products: invalid values ['Signatera WES']
LOPS-2922	Defect	Closed	Michael Livingston	Extraction Quant - Re-Upload Quant rundata - Complete WesExtQuantResult TM for each instance.	products: invalid values ['Signatera WES']
LOPS-2912	Story	Closed	Swati Giri	Support Barcode Display and Scan throughout WES Workflow	products: invalid values ['Signatera WES']
LOPS-2887	Task	Closed	Michael Livingston	LOPS-1128 Code Review Comments	products: invalid values ['Signatera WES']
LOPS-2818	Defect	Closed	Mikhail Makarin	WES on X: BERR - Plate with 'Log exception & Fail assays' samples couldn't finish Upload Ext Quant Rundata - Plating	products: invalid values ['Signatera WES']
LOPS-2604	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains correctly filtered DNA Sequencers, "NOVA SEQ X" is	products: invalid values ['Signatera WES']
LOPS-2572	Story	Closed	Brad Garrett	WES: Support Sequencing Prep Re-Run	products: invalid values ['Signatera WES']
LOPS-2571	Story	Closed	Klead Fusha	WES: Support Hybrid Capture Re-Run	products: invalid values ['Signatera WES']
LOPS-2570	Story	Closed	Mikhail Makarin	WES: Support Histopathology Re-Run	products: invalid values ['Signatera WES']
LOPS-2568	Story	Closed	Mikhail Terpugov	WES: Support Blood Extraction Re-Run	products: invalid values ['Signatera WES']
LOPS-2518	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue/Blood Combined POOL Re-Run starting from Sequencing Prep	products: invalid values ['Signatera WES']
LOPS-2517	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Hybrid Capture	products: invalid values ['Signatera WES']
LOPS-2516	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Hybrid Capture	products: invalid values ['Signatera WES']
LOPS-2515	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Histopathology	products: invalid values ['Signatera WES']
LOPS-2514	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Blood Extraction	products: invalid values ['Signatera WES']
LOPS-2513	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue SAMPLE Re-Run starting from Histopathology	products: invalid values ['Signatera WES']
LOPS-2510	Defect	Closed	Klead Fusha	Capture QC Review - Library Amplification Plate Barcode should be displayed	products: invalid values ['Signatera WES']
LOPS-2407	Story	Closed	Klead Fusha	Update Capture QC Review page for Hybrid Capture Re-Run	products: invalid values ['Signatera WES']
LOPS-2406	Story	Closed	Meghana Joshi	Update Capture QC Review page for Re-Quant	products: invalid values ['Signatera WES']
LOPS-2405	Story	Closed	Klead Fusha	Capture QC Review: Action > Fail Plate and Re-Run from Hybrid Capture	products: invalid values ['Signatera WES']
LOPS-2402	Story	Closed	Mikhail Makarin	Capture QC Review: Action > Fail Plate and Re-Run from Blood Extraction/Histopathology	products: invalid values ['Signatera WES']
LOPS-2401	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Tissue	products: invalid values ['Signatera WES']
LOPS-2383	Defect	Closed	Brad Garrett	Wes On X: Tissue Extraction - Separate Tissue button must be used to download Tissue Ext Worklist	products: invalid values ['Signatera WES']
LOPS-2278	Defect	Closed	Matt Smith	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample (Tissue Extraction)	products: invalid values ['Signatera WES']
LOPS-2244	Defect	Closed	Klead Fusha	Create Normalization WorklistTissue should be available via Download WES Worklist - Download Normalization Worklist dro	products: invalid values ['Signatera WES']
LOPS-1881	Defect	Closed	Klead Fusha	Wes on X: Lysis And Decrosslinking - Test Method status is Released if samples are marked Completed prior to entering QC	products: invalid values ['Signatera WES']
LOPS-1530	Story	Closed	Brad Garrett	Assay QC Review: Support Blood SAMPLE Re-Run starting from Blood Extraction	products: invalid values ['Signatera WES']
LOPS-1430	Story	Closed	Meghana Joshi	Capture QC Review: Actions > Re-Quant Plate	products: invalid values ['Signatera WES']
LOPS-1283	Story	Closed	Meghana Joshi	Capture Quant > Record New Capture Quant Values	products: invalid values ['Signatera WES']
LOPS-1048	Defect	Closed	Mikhail Makarin	WES Sequencing - Natera Lot # and/or Natera Part # for Flow Cell are not being validated through highlighting	products: invalid values ['Signatera WES']

WESonX Sprint 19 (57 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2962	Defect	Closed	Brad Garrett	Failed Samples Not Marked as Rework Candidate in Partial Plate Approval	products: invalid values ['Signatera WES']
LOPS-2916	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - WesSequencingPrepRunDetails TM is not getting Completed	products: invalid values ['Signatera WES']
LOPS-2851	Defect	Closed	Michael Livingston	Wes On X - Error Creating Sequencing Manifest since WES Capture QC AM lacks Pipeline Code value	products: invalid values ['Signatera WES']
LOPS-2850	Defect	Closed	Brad Garrett	Wes On X: Normalization - Blood/Tissue Normalization worklsits are generated incorrectly	products: invalid values ['Signatera WES']
LOPS-2843	Story	Closed	Meghana Joshi	WES: Capture QC Review - Task-Based User Flow	products: invalid values ['Signatera WES']
LOPS-2834	Defect	Closed	Mikhail Terpugov	Capture Quant - Replace WESCaptureQCRunDetails with WESCaptureQCRunDataEntered in WesCaptureQuantWorkflow Group TM	products: invalid values ['Signatera WES']
LOPS-2832	Defect	Closed	Michael Livingston	Download Library Prep worklist failed	products: invalid values ['Signatera WES']
LOPS-2827	Task	Closed	Kathy Dao	Support Onboarding and Histopathology	products: empty
LOPS-2807	Defect	Closed	Klead Fusha	WES on X: BERR - Fail & Re-extract doesn't work	products: invalid values ['Signatera WES']
LOPS-2792	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (SELECT ai.itemlabel \| Single value expected instead of 289 rows, Query.ja	products: invalid values ['Signatera WES']
LOPS-2788	Defect	Verified	—	Library QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action (Test only)	products: invalid values ['Signatera WES']
LOPS-2786	Task	Closed	—	Document WES specific e2e script for PSPC integration testing	products: invalid values ['Signatera WES']
LOPS-2750	Defect	Closed	Swati Giri	Wes On X: Pre-Capture Pooling - Worklist can't be created	products: invalid values ['Signatera WES']
LOPS-2718	Story	Closed	Kevin Detweiler	WES: Track Sequencing Run Status	products: invalid values ['Signatera WES']
LOPS-2715	Defect	Closed	Meghana Joshi	WES on X: Normalization - Control should be validated for a correct part number	products: invalid values ['Signatera WES']
LOPS-2685	Defect	Closed	Kevin Detweiler	Wes On X: Hybridization Thermal Cycler - Step can't be completed	products: invalid values ['Signatera WES']
LOPS-2683	Defect	Closed	Klead Fusha	Wes On X: Sequencing - Final 'Sequencing Prep' Array Method is not compatible with Seq Man requirements	products: invalid values ['Signatera WES']
LOPS-2660	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - Concentrations are set up only for the first WesExtrQuantResult Dataset	products: invalid values ['Signatera WES']
LOPS-2656	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - QC Review is performed for the first WesExtQuantResult TM and DataSet after	products: invalid values ['Signatera WES']
LOPS-2586	Defect	Closed	Mikhail Terpugov	Capture Quant Run Details - Rename WESCaptureQCRunDataEntered Test Method	products: invalid values ['Signatera WES']
LOPS-2585	Defect	Closed	Meghana Joshi	Capture QC Review - WESCaptureQC Test method isn't completed after QC review	products: invalid values ['Signatera WES']
LOPS-2567	Story	Closed	Kevin Detweiler	WES: Send Status Message for Workflow	products: invalid values ['Signatera WES']
LOPS-2533	Defect	Closed	Brad Garrett	Wes On X: Blood Extraction - Re-Test Whole Blood sample's WesBlood Test Method is not getting completed after re-extract	products: invalid values ['Signatera WES']
LOPS-2532	Defect	Verified	—	Wes On X: QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action	products: invalid values ['Signatera WES']
LOPS-2526	Defect	Verified	—	Wes On X - Error Creating Sequencing Manifest (Required String 'reagentlotid' is null or empty)	products: invalid values ['Signatera WES']
LOPS-2502	Defect	Verified	—	Wes on X: Error running Sequencing Prep step (AssignNextGroupTest.java:56)	products: invalid values ['Signatera WES']
LOPS-2497	Defect	Closed	Meghana Joshi	Wes On X: Tissue Extraction - TXE samples have WesTissueDnaExtraction Test Method that doesn't get Completed	products: invalid values ['Signatera WES']
LOPS-2487	Task	Closed	Swati Giri	Implement Barcode scanning on every step of WES assay	products: empty
LOPS-2461	Defect	Closed	Meghana Joshi	Upload WES Normalization Rundata does not validate reagents	products: invalid values ['Signatera WES']
LOPS-2439	Defect	Verified	—	Wes On X: Capture Quant Run Details - RunDataEntered Param Data Type is incorrect	products: invalid values ['Signatera WES']
LOPS-2420	Defect	Closed	Meghana Joshi	Library Amplification Tissue - Rundata could't be processed with prod-like Reagent header	products: invalid values ['Signatera WES']
LOPS-2399	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Blood	products: invalid values ['Signatera WES']
LOPS-2398	Story	Closed	Mikhail Makarin	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	products: invalid values ['Signatera WES']
LOPS-2386	Defect	Closed	Mikhail Terpugov	Wes On X: Normalization Worklist - Odd formatting for sample concentration values	products: invalid values ['Signatera WES']
LOPS-2375	Story	Closed	Kevin Detweiler	Update Library QC Review page for Re-Quant (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2343	Story	Closed	Swati Giri	Extraction Quant: Calculated Concentration for Tissue	products: invalid values ['Signatera WES']
LOPS-2342	Story	Closed	Mikhail Terpugov	Extraction/Library Quant: Round Calculated Concentration (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2340	Story	Closed	Mikhail Terpugov	Capture QC: Update Min QC Threshold Symbol (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2339	Story	Closed	Mikhail Terpugov	Library QC: Update Min QC Threshold Symbol (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2338	Story	Closed	Mikhail Terpugov	Extraction QC: Update Min QC Threshold Symbol (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2335	Tweak	Closed	Kevin Detweiler	Update sample type from "Unknown" to "Control" for the QC Method for Select Tissue Samples	products: invalid values ['Signatera WES']
LOPS-2319	Defect	Verified	—	Download WES Normalization Worklist Tissue - generates file without actual values	products: invalid values ['Signatera WES']
LOPS-2240	Story	Closed	Klead Fusha	Extraction QC Review: Action > Fail Plate and Re-Run - Tissue	products: invalid values ['Signatera WES']
LOPS-2239	Story	Closed	Mikhail Terpugov	Extraction QC Review: Action > Fail Plate and Re-Run - Blood	products: invalid values ['Signatera WES']
LOPS-2215	Story	Closed	Klead Fusha	Extraction QC Review > Approve Plate: Exception for Failed Tissue Sample	products: invalid values ['Signatera WES']
LOPS-2214	Story	Closed	Klead Fusha	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	products: invalid values ['Signatera WES']
LOPS-2207	Tweak	Closed	Swati Giri	WES on X: Zone and Control Colors	products: invalid values ['Signatera WES']
LOPS-2202	Story	Closed	Brad Garrett	Library Prep - Create Worklist for Tissue	products: invalid values ['Signatera WES']
LOPS-2132	Defect	Verified	—	Wes on X: Tissue Extraction: Tube to Rack - Control sample can't be scanned since it lacks a barcode	products: invalid values ['Signatera WES']
LOPS-2131	Defect	Closed	Brad Garrett	Wes on X: Tissue Extraction: Tube to Rack - Patient samples can't be scanned without using an alias workaround	products: invalid values ['Signatera WES']
LOPS-2121	Defect	Verified	—	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample	products: invalid values ['Signatera WES']
LOPS-1870	Story	Closed	Meghana Joshi	Pre-Capture Pooling: Exclude Failed Samples from Worklist > Exclude 'Library QC' Failed Sample	products: invalid values ['Signatera WES']
LOPS-1455	Story	Closed	Michael Livingston	Update Extraction QC Review page for Re-Quant (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1293	Task	Closed	Michael Livingston	Sequencing Manifest - Review and Update Master Data	products: invalid values ['Signatera WES']
LOPS-1274	Story	Closed	Kevin Detweiler	Library QC Review: Actions > Re-Quant Plate (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1270	Story	Closed	Mikhail Makarin	Library Quant > Re-Upload Quant Rundata	products: invalid values ['Signatera WES']
LOPS-1128	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	products: invalid values ['Signatera WES']

WESonX Sprint 18 (30 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2805	Defect	Closed	Leonid Garin	Wes On X - Error Creating Sequencing Manifest ('%Tumor-Selected Area' data entry did not set for the sample, CreateSeque	products: invalid values ['Signatera WES']
LOPS-2741	Defect	Closed	Brad Garrett	Wes On X: BE Quant - Worklist can't be created	products: invalid values ['Signatera WES']
LOPS-2681	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - Step can't be completed with 'Blood pool not found for plate' error	products: invalid values ['Signatera WES']
LOPS-2672	Task	Closed	Swati Giri	Sprint 17 UAT Support: Build Deployment & User Test Data Creation	products: invalid values ['Signatera WES']
LOPS-2644	Defect	Closed	Michael Livingston	Wes On X - WesRackToPlate TM and WESTissueDNAExtraction test are absent in WesTissueExtractionWorkflow	products: invalid values ['Signatera WES']
LOPS-2641	Task	Closed	Swati Giri	Create data for user testing - Sprint 17	products: invalid values ['Signatera WES']
LOPS-2557	Defect	Verified	Klead Fusha	WES on X: BERR - Gentle option for leaving page isn't available	products: invalid values ['Signatera WES']
LOPS-2547	Defect	Verified	—	Wes on X: Sequencing - The way Flow Cell ID data is stored is not compatible with platform requirements for Sequencing M	products: invalid values ['Signatera WES']
LOPS-2546	Defect	Verified	—	Wes on X: Sequencing - The way sequencer data is stored is not compatible with platform requirements for Sequencing Mani	products: invalid values ['Signatera WES']
LOPS-2483	Defect	Closed	Mikhail Terpugov	Wes On X: QC Review - Page doesn't display Array Level values when it's opened	products: invalid values ['Signatera WES']
LOPS-2482	Defect	Verified	Mikhail Terpugov	Wes On X: Blood/Tissue Extraction Quant Results - Calculated Concentration values are not saved on a Sample level	products: invalid values ['Signatera WES']
LOPS-2462	Story	Closed	Michael Livingston	Support Process Type, Sample Number, Sample Type in Library Prep/Amp Worklists	products: invalid values ['Signatera WES']
LOPS-2400	Story	Closed	Brad Garrett	Library QC Review > Approve Plate: Exception for Failed Tissue Sample	products: invalid values ['Signatera WES']
LOPS-2397	Story	Closed	Mikhail Terpugov	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	products: invalid values ['Signatera WES']
LOPS-2370	Defect	Verified	Meghana Joshi	Wes On X: Tissue Library: Quant plate QC Review - Quant plate barcode is not displayed	products: invalid values ['Signatera WES']
LOPS-2362	Defect	Closed	Kevin Detweiler	Known Concentration for Standards is displayed as knownconcentration(Standard)	products: invalid values ['Signatera WES']
LOPS-2345	Defect	Closed	Meghana Joshi	Wes On X: Blood Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	products: invalid values ['Signatera WES']
LOPS-2344	Defect	Closed	Meghana Joshi	Wes On X: Tissue Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	products: invalid values ['Signatera WES']
LOPS-2332	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'BERR' Failed Sample	products: invalid values ['Signatera WES']
LOPS-2328	Defect	Closed	Klead Fusha	Blood Lib Quant Plate barcode is not Displayed on QC Review Page	products: invalid values ['Signatera WES']
LOPS-2320	Defect	Closed	Meghana Joshi	LV should validate and store trackitems (Standards Reagent) against ExtrQuantPlating file uploaded.	products: invalid values ['Signatera WES']
LOPS-2261	Defect	Verified	Klead Fusha	Wes On X: Tissue Extraction: Quant plate QC Review - Quant plate barcode is not displayed	products: invalid values ['Signatera WES']
LOPS-1863	Defect	Verified	Klead Fusha	Wes On X: BE: Quant plate QC Review - Quant plate barcode is not displayed	products: invalid values ['Signatera WES']
LOPS-1819	Defect	Verified	Kevin Detweiler	Wes On X: Upload Library Prep Rundata - Rundata Processing is failing due to conversion issue	products: invalid values ['Signatera WES']
LOPS-1755	Defect	Closed	Kevin Detweiler	Wes On X: Tissue DNA Extraction: Run Details - Tissue DNA Plate Barcode suffix is not being validated	products: invalid values ['Signatera WES']
LOPS-1725	Defect	Verified	—	Wes On X: BE - Destination Well Locations are stored altered (without zeroes)	products: invalid values ['Signatera WES']
LOPS-1425	Story	Closed	Meghana Joshi	Library Amplification - Associate primer plate reagent to plate	products: invalid values ['Signatera WES']
LOPS-1419	Story	Closed	Meghana Joshi	Normalization - Add Control 'Reagent' to Plate	products: invalid values ['Signatera WES']
LOPS-1399	Story	Closed	Meghana Joshi	Extraction Quant - Add Standard as Reagent	products: invalid values ['Signatera WES']
LOPS-1120	Story	Closed	Meghana Joshi	Extraction Quant > Re-Upload Quant Rundata	products: invalid values ['Signatera WES']

WESonX Sprint 17 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2488	Defect	Verified	Klead Fusha	Wes On X: Error when creating worklists	products: invalid values ['Signatera WES']
LOPS-2446	Defect	Closed	Meghana Joshi	Wes on X: Sig WES Extraction Quant - Failed to upload quant plating file	products: invalid values ['Signatera WES']
LOPS-2419	Story	Closed	Mikhail Makarin	Support Process Type and Sample Number across all Worklists	products: invalid values ['Signatera WES']
LOPS-2391	Defect	Closed	Kevin Detweiler	Wes On X - Tissue Positive Control 1/2 QC statuses (Pass/Fail) doesn't shown in zone data at Extraction QC Review (SAMPL	products: invalid values ['Signatera WES']
LOPS-2390	Task	Closed	Michael Livingston	Create New Group Test Methods for Re-Runs	products: invalid values ['Signatera WES']
LOPS-2385	Story	Closed	Kevin Detweiler	WES: Update Blood Controls	products: invalid values ['Signatera WES']
LOPS-2384	Story	Closed	Kevin Detweiler	WES: Update Tissue Controls	products: invalid values ['Signatera WES']
LOPS-2317	Task	Closed	Meghana Joshi	Update gen_runlogs.py for pre-capture pooling	products: invalid values ['Signatera WES']
LOPS-2213	Story	Closed	Mikhail Terpugov	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	products: invalid values ['Signatera WES']
LOPS-2211	Defect	Closed	Meghana Joshi	WES Rack-To-Plate Persist TrackItem	products: invalid values ['Signatera WES']
LOPS-2206	Story	Closed	Michael Livingston	WES on X: Support Primer Plates	products: invalid values ['Signatera WES']
LOPS-2149	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	products: invalid values ['Signatera WES']
LOPS-2139	Story	Closed	Mikhail Makarin	Sequencing: Select Sequencer	products: invalid values ['Signatera WES']
LOPS-1878	Defect	Closed	Swati Giri	Blood Extraction: Remove ‘Instrument’ and ‘Reagent’ Free Text Fields from Manual Run Details	products: invalid values ['Signatera WES']
LOPS-1418	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'Extraction QC' Failed Sample	products: invalid values ['Signatera WES']
LOPS-1413	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail and Re-Extract	products: invalid values ['Signatera WES']
LOPS-1292	Story	Closed	Mikhail Makarin	Sequencing: Create RunDetails Master Data	products: invalid values ['Signatera WES']
LOPS-1291	Story	Closed	Klead Fusha	Sequencing Prep: Create Sequencing Prep Pool	products: invalid values ['Signatera WES']
LOPS-1290	Story	Closed	Klead Fusha	Sequencing Prep: Create RunDetails master data	products: invalid values ['Signatera WES']
LOPS-1289	Story	Closed	Meghana Joshi	Sequencing Prep: Create RunDetails master data for Transfer Volume	products: invalid values ['Signatera WES']
LOPS-1288	Task	Closed	Meghana Joshi	Spike - Investigate and document design plan for calculating and displaying transfer volume	products: invalid values ['Signatera WES']
LOPS-1286	Story	Closed	Mikhail Terpugov	Capture QC Review - Create QC Review Page and Actions	products: invalid values ['Signatera WES']
LOPS-1285	Story	Closed	Meghana Joshi	Capture QC - Plate-Level QC Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1278	Story	Closed	Mikhail Makarin	Hybridization Thermal Cycler - Create RunDetails master data	products: invalid values ['Signatera WES']
LOPS-1276	Story	Closed	Mikhail Makarin	Pre-Capture Pooling - Create Worklist Processor and button	products: invalid values ['Signatera WES']

WESonX Sprint 16 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2119	Defect	Closed	Michael Livingston	Wes on X: Deparaffinization - Incorrect Control description	products: invalid values ['Signatera WES']
LOPS-2027	Story	Closed	Klead Fusha	Library Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-2026	Story	Closed	Klead Fusha	Library Quant: Rundata - Plating > Store Rundata File as Attachment (Blood)	products: invalid values ['Signatera WES']
LOPS-2025	Story	Closed	Klead Fusha	Extraction Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1956	Story	Closed	Klead Fusha	Library Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1895	Story	Closed	Leonid Garin	The system shall maintain the genealogy of arrays created via rundata file processing.	products: empty
LOPS-1879	Story	Closed	Klead Fusha	Extraction Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1869	Story	Closed	Klead Fusha	Extraction Quant - Create Worklist for Tissue	products: invalid values ['Signatera WES']
LOPS-1758	Story	Closed	Meghana Joshi	Library QC Review - QC Review Page for Tissue Library QUANT Plate	products: invalid values ['Signatera WES']
LOPS-1756	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review Page for Tissue Library SAMPLE Plate	products: invalid values ['Signatera WES']
LOPS-1745	Story	Closed	Mikhail Terpugov	Library Prep - Process Rundata, Create Plate for Tissue	products: invalid values ['Signatera WES']
LOPS-1563	Story	Closed	Mikhail Makarin	Library QC - Create Plate-Level Tissue Quant QC Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1562	Story	Closed	Mikhail Makarin	Library QC - Create Tissue Sample / Control Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1470	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required for Tissue	products: invalid values ['Signatera WES']
LOPS-1458	Story	Closed	Meghana Joshi	Tissue Extraction 9 > Tissue Re-Rack - Unload Tissue Samples	products: invalid values ['Signatera WES']
LOPS-1457	Task	Closed	Michael Livingston	Spike - Investigate new platform re-run/exception functionality for implementation	products: invalid values ['Signatera WES']
LOPS-1431	Story	Closed	Meghana Joshi	Capture Quant - Run Details	products: invalid values ['Signatera WES']
LOPS-1284	Story	Closed	Meghana Joshi	Capture QC - Sample-Level QC Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1282	Story	Closed	Klead Fusha	Capture Quant - Create array method and record results	products: invalid values ['Signatera WES']
LOPS-1281	Story	Closed	Klead Fusha	Capture PCR Cleanup - Create Rundata processor and Update Master Data	products: invalid values ['Signatera WES']
LOPS-1280	Story	Closed	Michael Livingston	Capture PCR Cleanup - Create Worklist Processor and Button	products: invalid values ['Signatera WES']
LOPS-1277	Story	Closed	Meghana Joshi	Pre-Capture Pooling - Create Rundata Processor and Update existing Master Data	products: invalid values ['Signatera WES']
LOPS-1265	Story	Closed	Meghana Joshi	Library Quant - Create Worklist, Process Rundata (Results/Plating), Create Plate for Tissue	products: invalid values ['Signatera WES']
LOPS-1259	Task	Closed	Brad Garrett	Tissue Extraction 9 > Tissue Re-Rack - Spike - investigate unload tissue samples	products: invalid values ['Signatera WES']
LOPS-1182	Story	Closed	Swati Giri	Create a Query for the Array page to select Blood/Tissue Plates for Pre-Capture Pooling	products: invalid values ['Signatera WES']

WESonX Sprint 15 (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2234	Tweak	Closed	Klead Fusha	Remove Lock Attachment Popup - Rundata	products: invalid values ['Signatera WES']
LOPS-2157	Defect	Closed	Meghana Joshi	Wes on X: Tissue Extraction: Tube to Rack - QC method name doesn't reflect the step name	products: invalid values ['Signatera WES']
LOPS-2144	Defect	Closed	Mikhail Terpugov	Wes On X - Blood Control QC and Blood NTC Control QC don't display in WLP2 QC review	products: invalid values ['Signatera WES']
LOPS-2056	Task	Closed	Brad Garrett	Capture QC Review - Spike: Create QC Review Page and Actions	products: invalid values ['Signatera WES']
LOPS-2024	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Store Rundata File as Attachment	products: invalid values ['Signatera WES']
LOPS-2023	Story	Closed	Mikhail Terpugov	Normalization - Store Rundata File as Attachment (Blood, Tissue)	products: invalid values ['Signatera WES']
LOPS-1844	Defect	Closed	Klead Fusha	Сontrol information stored at the plate-level during QC review for Norm plate	products: invalid values ['Signatera WES']
LOPS-1744	Story	Closed	Michael Livingston	Fragmentation - Record Run Details for Tissue	products: invalid values ['Signatera WES']
LOPS-1743	Story	Closed	Klead Fusha	Extraction QC Review - QC Review Page for Tissue Extraction QUANT Plate	products: invalid values ['Signatera WES']
LOPS-1742	Story	Closed	Klead Fusha	Extraction Quant - Process Rundata, Create Plate for Tissue	products: invalid values ['Signatera WES']
LOPS-1635	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review page for Library QUANT Plate	products: invalid values ['Signatera WES']
LOPS-1560	Story	Closed	Brad Garrett	Extraction QC - Create Tissue Quant Plate Specification	products: invalid values ['Signatera WES']
LOPS-1559	Story	Closed	Brad Garrett	Extraction Quant QC - Create Tissue Sample/control Specifications	products: invalid values ['Signatera WES']
LOPS-1433	Story	Closed	Brad Garrett	Extraction QC Review - QC Review Page for Tissue Extraction SAMPLE Plate	products: invalid values ['Signatera WES']
LOPS-1420	Story	Closed	Klead Fusha	Normalization - Create rundata processor, array method for Tissue	products: invalid values ['Signatera WES']

WESonX Sprint - E2E (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2716	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (Single value expected instead of 256 rows, Query.java:226)	products: invalid values ['Signatera WES']

WESonX - Post Launch (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2140	Defect	Closed	—	Wes on X: Tissue Extraction: Tube to Rack - Tissue Control Barcode is not fully visible for user to review	products: invalid values ['Signatera WES']
LOPS-1523	Defect	Closed	Meghana Joshi	Wes On X: BERR - Error Descriptions are hard to read	products: invalid values ['Signatera WES']

WESonX - Launch (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3105	Defect	Closed	—	Capture QC Review - Re-Quant - Add E-sign for Re-Quant action	products: invalid values ['Signatera WES']
LOPS-2784	Task	Opened	—	Spike - Investigate "Apply Next Array Method for Testing"	products: empty
LOPS-1906	Defect	Closed	—	QC Batch Sample Type should be required in QC Method	products: invalid values ['Signatera WES']
LOPS-1754	Defect	Closed	—	Wes On X: Tissue DNA Extraction: Run Details - Instrument and Reagent labels don't match requirements	products: invalid values ['Signatera WES']

RGT/EQMT 64 20260309 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8917	Task	Ready for Development	Mearat Hou	Custom DNS for Private APIGateway (dev)	products: empty

Oncology 15-2024 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6927	Defect	Closed	Michael Livingston	The cfDNA Pool Dilution Worklist Generation failed in re run cfDNA Pool Sequencing Process	products: invalid values ['sgNIPT']
LOPS-6884	Story	Closed	Michael Livingston	Spike: Investigate issue with multiple genes for Assay 44	products: invalid values ['sgNIPT']
LOPS-6849	Task	Code Review	Mai Ton-Nu	Spike - Investigate requirements for Import primers as reagent types	products: invalid values ['Horizon X']
LOPS-6785	Story	Verified	Mehmet Ali Eken	Update Reagent Validation API to include matrix barcode in response	products: invalid values ['sgNIPT']
LOPS-6780	Task	Closed	Lev Evstratov	SPIKE - investigate automated instrument integration solution	products: empty
LOPS-6779	Task	Closed	Howard LaHurreau	SPIKE - investigate automated instrument integration solution	products: empty
LOPS-6740	Tweak	Verified	Sri Gorantla	enable users to edit array barcode for gDNA Pool Tapestation Quant	products: invalid values ['sgNIPT']
LOPS-6723	Defect	Verified	Brandon Culver	System must record values for controls	products: invalid values ['sgNIPT']
LOPS-6711	Task	Closed	Bob Ruff	Create a training environment for PM/users	products: invalid values ['sgNIPT']
LOPS-6645	Defect	Verified	Brandon Culver	SgniptAlgPipelineRequest fails when both HBA1 and HBA2 genes are listed in assay attributes	products: invalid values ['sgNIPT']
LOPS-6642	Story	Verified	Michael Livingston	Update master data for plasma manual Isolation	products: invalid values ['sgNIPT']
LOPS-6517	Story	Verified	Bob Ruff	Generate a verso worklist for all samples that are available for biobanking	products: invalid values ['sgNIPT']
LOPS-6477	Story	Verified	Mehmet Ali Eken	Testing not applied to all assays when >1 assay request for the same gDNA sample are processed	products: invalid values ['sgNIPT']
LOPS-6374	Defect	Verified	Michael Livingston	Overall Plate QC values is empty when NTC fails.	products: invalid values ['sgNIPT']
LOPS-5762	Story	Verified	Lev Evstratov	cfDNA Rework Scenario Handling (Pool Quant) - Master Data Updates	products: invalid values ['sgNIPT']
LOPS-5192	Task	Closed	Mai Ton-Nu	sgNIPT - Query for Equipment and Reagents used at each sgNIPT workflow step from Extractions to Sequencing	products: invalid values ['sgNIPT']
LOPS-5125	Task	Closed	Ariel Jirau	Migrate python based queries to populate s3 snowflake with Lambda from redshift	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-2471	Story	Verified	Howard LaHurreau	LOPS support for Verso batching - sample testing	products: invalid values ['sgNIPT']

OSF M186 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3243	Task	Closed	Kathy Dao	Support Histopathology	products: empty

MiSeq Workflows (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9861	Story	Opened	Swati Giri	GHPv2- Miseq Pooling Upload Worklist	products: invalid values ['Signatera GHP']
LOPS-9841	Story	Opened	Kevin Detweiler	GHPv2 on Miseq: Tramline and Sidebar Updates	products: invalid values ['Signatera GHP']
LOPS-9839	Story	Closed	Kevin Detweiler	Miseq Tramline and Sidebar Updates	products: invalid values ['Signatera GHP']
LOPS-9837	Story	Opened	Swati Giri	GHPv2: Add Miseq to Post Amp Side Bar Menu	products: invalid values ['Signatera GHP']
LOPS-9836	Story	Opened	—	GHPv2 on Miseq Tramline	products: invalid values ['Signatera GHP']
LOPS-9740	Story	SQA Blocked	Kevin Detweiler	Additional Miseq Tramline and Sidebar Updates	products: invalid values ['Signatera GHP']
LOPS-9738	Story	Ready for SQA	Kevin Detweiler	WGS Miseq Sequencing InProgress Page	products: invalid values ['Signatera GHP']
LOPS-9686	Story	SQA Blocked	Kevin Detweiler	Miseq Tramline and Sidebar Updates	products: invalid values ['Signatera GHP']
LOPS-9515	Story	Ready for SQA	Swati Giri	Miseq Pooling Upload Worklist	products: invalid values ['Signatera GHP']
LOPS-9446	Story	SQA Blocked	Swati Giri	Add Miseq to Post Amp Side Bar Menu	products: invalid values ['Signatera GHP']
LOPS-9444	Story	SQA Blocked	Swati Giri	Miseq Tramline	products: invalid values ['Signatera GHP']

LV1 Sprint 235 (5/12-5/23) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6844	Task	Closed	Alex Pakhunov	Add Command to the alter_user.sql.j2 File to Give All Available Privileges to dbzuser on the CONTAINERTYPE Table	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20260223 (63) (101 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10061	Epic	In Progress	Elena Kolobanova (Elena Kolobanova)	Automation Testing - 1.0.4.8	products: invalid values ['Signatera WES']
LOPS-10053	Story	Code Review	Swati Giri	UI Updates to QC Batch Maintenance Page	products: invalid values ['Signatera GHP']
LOPS-10050	Task	Code Review	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10031	Sub-task	Opened	—	Update kafka configuration for reading topic events.labops.workflow.status.v1	products: empty
LOPS-10025	Task	In Progress	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10024	Task	Opened	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10023	Task	Opened	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10022	Task	Opened	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10021	Task	In Progress	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10020	Epic	In Progress	—	LOPS WES/WGS - Production Support - Sprint 20260223	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-10019	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review on Primer Design Review step for WGS product	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-10018	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify the Status and Active Array Method on Primer Design Review step for WGS	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-10017	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9862	Story	Code Review	Swati Giri	MiSeq Pooling Download Worklist	products: invalid values ['Signatera GHP']
LOPS-9802	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9801	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9762	Task	Ready for Development	—	YALP -LOPS- Send Tissue sample to rework from Histo via API	products: empty
LOPS-9759	Task	Closed	Ize Imai	WES/WGS - Create database reset job for gitlab pipeline	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9753	Sub-task	Closed	—	[WES] Update outdated test cases: Dmitry	products: empty
LOPS-9748	Sub-task	Closed	—	[WES] Update GIDs for the migrated automated tests in lops-testrunner	products: empty
LOPS-9747	Sub-task	Closed	—	[WES] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	products: empty
LOPS-9746	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Dmitry	products: empty
LOPS-9745	Sub-task	Blocked	—	[WES] Create relationships with requirements for the migrated test cases: Dragana	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9744	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Mila	products: empty
LOPS-9743	Sub-task	Closed	—	[WES] Update outdated test cases: Mila	products: empty
LOPS-9742	Sub-task	Closed	—	[WES] Migrate absent test cases	products: empty
LOPS-9737	Story	In Progress	Kevin Detweiler	WGS Miseq Sequencing Prep Page	products: invalid values ['Signatera GHP']
LOPS-9711	Defect	In SQA Review	Ray Ward	Unable to reject plates at Capture QC Review if they had multiple library quants	products: invalid values ['Signatera WES']
LOPS-9696	Sub-task	Closed	—	[WGS] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	products: empty
LOPS-9691	Sub-task	Closed	—	[WGS] Update GIDs for the migrated automated tests in lops-testrunner	products: empty
LOPS-9668	Sub-task	Closed	—	Ensure that all the test cases with GIDs collisions were migrated	products: empty
LOPS-9659	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dmitry	products: empty
LOPS-9658	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dragana	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9657	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Mila	products: empty
LOPS-9649	Sub-task	Closed	—	[WGS] Update outdated test cases	products: empty
LOPS-9648	Sub-task	Closed	—	[WGS] Migrate absent test cases	products: empty
LOPS-9642	Sub-task	Closed	—	[WES] Verify that all requirements were migrated to the Maintenance project	products: empty
LOPS-9641	Sub-task	Closed	—	[WGS] Verify that all requirements were migrated to the Maintenance project	products: empty
LOPS-9640	Sub-task	Closed	—	[WES] Create the list of test cases that should be migrated/updated	products: empty
LOPS-9639	Sub-task	Closed	—	[WGS] Create the list of test cases that should be migrated/updated	products: empty
LOPS-9636	Story	SQA Blocked	Ray Ward	Enable receiving TNPs from YALP	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9598	Task	In Progress	—	Investigate how LOPS communicates with PIPE in other instances (ex. tfMRD, sgNIPT)	products: invalid values ['Signatera GHP']
LOPS-9542	Story	In Progress	Ize Imai	System reads and saves all metrics from PIPE API framework for DAQ	products: invalid values ['Signatera GHP']
LOPS-9533	Task	In Progress	Dennis Lin	Create Confluence pages to assist EPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9530	Story	In Progress	Ray Ward	Allow Administrator role to edit Disposition on AssayMaint page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9459	Story	Ready for SQA	Swati Giri	MiSeq Pooling Download Worklist	products: invalid values ['Signatera GHP']
LOPS-9439	Story	In Progress	Kevin Detweiler	MiSeq Qubit	products: invalid values ['Signatera GHP']
LOPS-9417	Sub-task	Closed	—	Update LV_Incdt to call the new action when incidents are created	products: empty
LOPS-9415	Sub-task	Closed	—	Action to publish kafka event	products: empty
LOPS-9414	Sub-task	Closed	—	Create a script to create kafka json format	products: empty
LOPS-9413	Sub-task	Closed	—	Update Script To Get Parent Sample Ids for Rework Samples	products: empty
LOPS-9392	Sub-task	Closed	—	Create new transaction type for outbound message	products: empty
LOPS-9391	Sub-task	Closed	—	Add System Instrument For YALP	products: empty
LOPS-9378	Story	SQA Blocked	—	Enable Producing Topic For Rework Samples to be send back to YALP	products: invalid values ['Signatera WES']
LOPS-9377	Story	SQA Blocked	Swati Giri	Create a script for consuming YALP event for TXE tubes	products: invalid values ['Signatera WES']
LOPS-9330	Task	Opened	—	WES/WGS 1.0.5.0 - Preliminary E2E environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9318	Task	Opened	—	WES/WGS 1.0.5.0 - E2E sample staging	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9317	Task	Opened	—	WES/WGS 1.0.5.0 - E2E environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9316	Story	Opened	—	WES/WGS 1.0.5.0 - E2E sample script updates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9315	Epic	Opened	—	WES/WGS 1.0.5.0 - E2E Support	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9314	Task	Opened	—	WES/WGS 1.0.5.0 - EPS Training Sessions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9312	Task	Opened	—	WES/WGS 1.0.5.0 - Jama & MasterControl review/sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9311	Task	Opened	—	Prepare merge release/lops-weswgs-1.0.5.0 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9309	Task	Opened	—	WES/WGS 1.0.5.0 - RC environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9307	Task	Opened	Kevin Detweiler	WES/WGS 1.0.5.0 - Lab User Training Sessions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9306	Task	Opened	Kevin Detweiler	WES/WGS 1.0.5.0 - Create User Guides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9304	Task	Opened	—	Run flaky automated tests manually - WES/WGS 1.0.5.0	products: invalid values ['Signatera WES']
LOPS-9303	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Mila	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9302	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Serhii	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9301	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dmitry	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9300	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dragana	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9299	Task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9298	Task	Opened	—	WES/WGS 1.0.5.0 - WGS test case creation	products: invalid values ['Signatera GHP']
LOPS-9297	Task	Opened	—	WES/WGS 1.0.5.0 - WES test case creation	products: invalid values ['Signatera WES']
LOPS-9296	Task	Opened	—	WES/WGS 1.0.5.0 - Manual test plan creation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9295	Task	Opened	—	WGS automated regression - WES/WGS 1.0.5.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9294	Task	Opened	—	WES automated regression - WES/WGS 1.0.5.0	products: invalid values ['Signatera WES']
LOPS-9290	Task	Ready for Development	—	BAM Merge Scenario 13 - No BAM merging of cancelled sample runs	products: invalid values ['Signatera GHP']
LOPS-9289	Task	Ready for Development	—	BAM Merge Scenario 12 - Emergency BAM merge deactivation	products: invalid values ['Signatera GHP']
LOPS-9288	Task	Ready for Development	—	BAM Merge Scenario 11 - Duplicate run exclusion	products: invalid values ['Signatera GHP']
LOPS-9287	Task	Ready for Development	—	BAM Merge Scenario 10 - Three runs; last one passes on its own	products: invalid values ['Signatera GHP']
LOPS-9286	Task	Ready for Development	—	BAM Merge Scenario 9 - Three runs with alternating coverage & run failures	products: invalid values ['Signatera GHP']
LOPS-9285	Task	Ready for Development	—	BAM Merge Scenario 8 - Data from a non-coverage failure is not merged	products: invalid values ['Signatera GHP']
LOPS-9284	Task	Ready for Development	—	BAM Merge Scenario 7 - Data from failed sequencing runs is not merged	products: invalid values ['Signatera GHP']
LOPS-9283	Task	Ready for Development	—	BAM Merge Scenario 6 - Data from failed sequencing runs is not sent for BAM merging	products: invalid values ['Signatera GHP']
LOPS-9282	Task	Ready for Development	—	BAM Merge Scenario 5 - No BAM merging across different source samples	products: invalid values ['Signatera GHP']
LOPS-9281	Task	Ready for Development	—	BAM Merge Scenario 4 - WES tissue samples aren't sent for BAM merging	products: invalid values ['Signatera GHP']
LOPS-9280	Task	Ready for Development	—	BAM Merge Scenario 3 - WES blood samples aren't sent for BAM merging	products: invalid values ['Signatera GHP']
LOPS-9279	Task	Ready for Development	—	BAM Merge Scenario 2 - WGS blood samples aren't sent for BAM merging	products: invalid values ['Signatera GHP']
LOPS-9278	Task	Ready for Development	—	BAM Merge Scenario 1 - "Happy Path" BAM merging	products: invalid values ['Signatera GHP']
LOPS-9277	Epic	Opened	—	WES/WGS 1.0.5.0 - BAM Merge Scenario Testing	products: invalid values ['Signatera GHP']
LOPS-9236	Story	In Progress	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9014	Task	Blocked	—	WES/WGS Jama test case migration	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8975	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Update to the Assay QC Review roll-up pass/fail logic	products: invalid values ['Signatera GHP']
LOPS-8974	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Sample-level JasperReport support for merged QC metrics	products: invalid values ['Signatera GHP']
LOPS-8973	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Primer Design QC Review page	products: invalid values ['Signatera GHP']
LOPS-8972	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Assay QC Review page	products: invalid values ['Signatera GHP']
LOPS-8971	Story	Ready for SQA	Ize Imai	Storage of the number of merge candidates at the time of DAQ pipeline launch	products: invalid values ['Signatera GHP']
LOPS-8668	Story	Ready for SQA	Ize Imai	Extend WGS pipeline launch Kafka messages to include previous pipeline job IDs	products: invalid values ['Signatera GHP']
LOPS-8408	Task	Opened	Ize Imai	LOPS WES/WGS Kafka message generators	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8330	Story	In Progress	Ray Ward	SPIKE: Library Prep: Bulk Retest page performance enhancements	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20260209 (62) (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9937	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.6) to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9901	Task	Closed	—	Manual regression testing Mila - WES/WGS 1.0.4.6	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9899	Sub-task	Closed	—	fix test est_TissueExtraction_QcReview_AcceptPartial	products: empty
LOPS-9893	Defect	Closed	—	Re-quant QPCR -> Plate is moved to Historical	products: invalid values ['Signatera GHP']
LOPS-9849	Task	Closed	—	Investigation: Determine lift for LOPS-PIPE Integration	products: invalid values ['Signatera GHP']
LOPS-9804	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9803	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9800	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9799	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20260209	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9796	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Download Tissue Extraction Quant Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9795	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that System will create Tissue Filler Samples	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9794	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that System will create Blood Filler Samples	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9784	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Update WGS testcases status after review	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9681	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.6	products: invalid values ['Signatera GHP']
LOPS-9680	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.6	products: invalid values ['Signatera WES']
LOPS-9679	Task	Closed	—	WES/WGS 1.0.4.6 - Jama & MasterControl review/sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9678	Task	Closed	Ray Ward	Prepare merge release/lops-weswgs-1.0.4.6 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9677	Task	Closed	Swati Giri	WES/WGS 1.0.4.6 - RC environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9675	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9674	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9673	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9644	Sub-task	Closed	—	Mila - WGS test cases review in terms of potential test automation	products: empty
LOPS-9643	Sub-task	Closed	—	Dragana - WGS test cases review in terms of potential test automation	products: empty
LOPS-9638	Story	Verified	Dennis Lin	Add workflow step to Log Exception Pop-up	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9626	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS test cases review in terms of potential test automation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9568	Epic	Closed	Elena Kolobanova (Elena Kolobanova)	Automation Testing - 1.0.4.6	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']

LOPS WES/WGS 20260126 (61) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9728	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Capture Plate is supported from Plate List Page	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9727	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Library Plate is supported for all available Quant Data	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9726	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify Blood Library Plate Report content	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9715	Task	Closed	—	Review Initial Integration Tests for YALP–LOPS Histo and Research Configuration Handling	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9702	Sub-task	Closed	Ize Imai	investigate how to pool tissue slides to tissue extract via API	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9687	Task	Closed	Ize Imai	Document current deployment and production support ticket process	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9672	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9671	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9670	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9669	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20260126	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9554	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9497	Story	Verified	Dennis Lin	Add Pre-Amp and Post Amp menus to be part of Read-only access	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9418	Task	Closed	—	Slides are stuck in Histopathology, on Dissection step	products: empty
LOPS-9061	Task	Closed	—	Investigation: lops-weswgs-1.0.4.1 Performance Issues	products: empty
LOPS-8506	Task	Closed	—	Testing support for CCR-592	products: invalid values ['Signatera GHP']

LOPS WES/WGS 20260112 (60) (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9763	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Capture Plate is supported for all available Quant Data	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9725	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Library Plate is supported from Plate List Page	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9656	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify Blood Extraction Plate Report Content	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9655	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood Extraction Plate is supported for all available Quant Data	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9654	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Extraction Plate is supported from Plate List Page	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-9584	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that system support Sequencing Prep Re-Run	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9557	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9556	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9555	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9553	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9552	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260112	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9516	Task	Closed	Ray Ward	Investigation: Loading of additional samples into a completed plate	products: invalid values ['Signatera GHP']
LOPS-9188	Task	Opened	Monish Grover	Ensure Accurate Instance-Level QC Association Across Lab Trips	products: invalid values ['Signatera WES']
LOPS-9187	Task	Opened	Monish Grover	Extend LOPS data product to include additional identifiers	products: invalid values ['Signatera WES']
LOPS-9144	Task	Opened	—	Investigate Kafka message consumption	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9006	Task	In Progress	Swati Giri	LOPS WES/WGS test automation switchover - AI code conversion tool investigation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8980	Defect	Opened	Ray Ward	Create TXE Tube- Fix task to be compatible with rework samples and canceled slides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8708	Task	Opened	—	Evaluate and re-configure users with LabOps Manager and LabOps Operator jobtypes in Production	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8502	Task	Closed	Dennis Lin	Correction of older sequencer configurations	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8446	Task	Opened	Dennis Lin	Clean-up of OOnSS-related spurious primer design jobs in LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8389	Defect	Development Blocked	Ray Ward	Test methods remain active after assays are cancelled in LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7854	Task	Opened	Dennis Lin	ARM / LOPS OOnSS Scenario Testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7677	Tweak	Ready for Development	Dennis Lin	Add additional logging to Query.java	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251229 (59) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9508	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.4 - Mila	products: empty
LOPS-9493	Task	Closed	Kevin Detweiler	Verify GHPv2 samples will not display on Existing GUIDE pages	products: invalid values ['Signatera GHP']
LOPS-9419	Defect	Verified	Kevin Detweiler	Histopathology Operator sees PreAmp and PostAmp menus in sidebar	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9265	Defect	Verified	Kevin Detweiler	PostAmp and PreAmp menus missing in the hamburger menu	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9239	Story	Verified	Monish Grover	Study ID- Add Study column to Array Sample List	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8919	Defect	Verified	Dennis Lin	Histology Operator mustn't see Manage Samples in sidebar	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7028	Defect	Verified	Monish Grover	WES/WGS: Histopathology - Tissue Return: Information missing on "Edit/View Sample" Pages	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251215 (58) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9628	Defect	Verified	Dennis Lin	Users are able to make updates using a read only job type from LIMS menu	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9447	Task	Closed	—	Regression testing for JAMA upgrade	products: empty
LOPS-9310	Task	Closed	—	WES/WGS 1.0.5.0 - Day-Before environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9272	Task	Closed	—	WES/WGS 1.0.4.4 - Jama & MasterControl review/sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9270	Task	Closed	—	WES/WGS 1.0.4.4 - Day-Before environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9057	Task	Closed	—	LOPS WES/WGS Jira Project switchover	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8406	Task	Ready for Development	Kevin Detweiler	Add example worklists and rundata files to the LOPS WES/WGS repo	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251201 (57) (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9476	Task	Closed	—	Cherry Pick and merge ECR work into project branch	products: empty
LOPS-9339	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Upgrade Wes Profiles with MERGED_BAM_NUMBER metric	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9274	Task	Closed	—	Run flaky automated tests manually - WES/WGS 1.0.4.4	products: invalid values ['Signatera WES']
LOPS-9273	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.4	products: invalid values ['Signatera WES']
LOPS-9271	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.4.4 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9269	Task	Closed	Swati Giri	WES/WGS 1.0.4.4 - RC environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9268	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.4	products: invalid values ['Signatera GHP']
LOPS-9259	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9258	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9257	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9256	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9255	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9254	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9253	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251201	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9229	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Automation - Create WES Blood sample with failed "ON_TARGET_DEDUPLICATED_COVERAGE_MATCHED_NORMAL" metric	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9228	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Automation - Create WES Tissue sample with failed "ON_TARGET_DEDUPLICATED_COVERAGE_TUMOR" metric	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9222	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that returned -FXB (FFPE Paraffin Block) sample could be unreturned	products: invalid values ['Signatera WES']
LOPS-9194	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that -FXB (FFPE Paraffin Block) sample in status = "Completed" with Assay Status = "Completed" and Receive Date >	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9007	Task	Closed	Ray Ward	LOPS WES/WGS test automation switchover - AI Jama test case generator investigation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8976	Task	Closed	Dennis Lin	Backfill of existing sample Study IDs	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251117 (56) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9180	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Mila	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9179	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Serhii	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9158	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9157	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9155	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9154	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9153	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9152	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9145	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251117	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9103	Defect	Verified	Dennis Lin	Update Tissue Return Page and gizmo so that samples do not appear more than once	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9097	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.3	products: invalid values ['Signatera GHP']
LOPS-9095	Task	Closed	—	WES/WGS 1.0.4.3 - Jama & MasterControl review/sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9094	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.4.3 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9093	Task	Closed	Swati Giri	WES/WGS 1.0.4.3 - Day-Before environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9092	Task	Closed	Swati Giri	WES/WGS 1.0.4.3 - RC environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9091	Epic	Closed	Ray Ward	WES/WGS 1.0.4.3 - Deployment Prerequisites	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9008	Task	Closed	Kevin Detweiler	LOPS WES/WGS test automation switchover - UI testing tool investigation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7792	Story	Verified	Ray Ward	Allow multiple sample selection on Assay QC NtrSampleAnalysisReview page	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251103 (55) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9141	Task	Closed	Ize Imai	Enable Debug mode for remote k8s hosted LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9077	Task	Closed	Swati Giri	Auto complete sample that fail Assay QC	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9063	Defect	Verified	Monish Grover	PreAmp and PostAmp gizmo menus missing in the 1.4.0.2 release candidate	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9054	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9053	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9052	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9051	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9050	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9049	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9048	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251103	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8912	Task	Closed	—	Improve test automation to Support e-Signatures in Histopathology workflow	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-8893	Task	Closed	—	Fix TubeVerificationApi/TubeVerification with verifying of QC batch's disappearance on WES/WGS Tube Verification‎ page	products: invalid values ['LOPS-TestRunner']
LOPS-8827	Task	Closed	—	Add platform test for StudyId	products: invalid values ['LOPS-TestRunner']

LOPS WES/WGS 20251020 (54) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8989	Task	Closed	—	Fix WGS regression tests	products: empty
LOPS-8988	Task	Closed	—	Fix WES regression tests	products: invalid values ['LOPS-TestRunner']
LOPS-8983	Task	Closed	Ize Imai	Prep 1.0.4.2 branch (shift 1.0.4.1 to 1.0.4.2, use 1.0.4.1 for ePatch)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8950	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.0) to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8948	Task	Closed	Ize Imai	Put release-lops-1-2-1-0-1520019 db build in the separated branch with the unique name available for daily regression	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8944	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8943	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8942	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8941	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8940	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8936	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8935	Defect	Verified	Monish Grover	GUIDE: All tramstop header hyperlinks should be removed	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8932	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251020	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8921	Task	Closed	Ize Imai	Restore SQE environments 10/17	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8892	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Upgrade all WES/WGS steps with allureStep usage	products: invalid values ['LOPS-TestRunner']
LOPS-8841	Task	Closed	Swati Giri	More repairs for the RC environment LOPS WES/WGS deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8643	Defect	Verified	Monish Grover	Unable to find the qPCR/TapeStation files results attachments in LOPS	products: invalid values ['Signatera GHP']
LOPS-6717	Story	Verified	Swati Giri	Support e-Signatures in Histopathology workflow	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20251006 (53) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8870	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Fix Test_WGS_HappyPathGuided	products: invalid values ['LOPS-TestRunner']
LOPS-8869	Task	Closed	—	Update Tissue sample extraction QC thresholds	products: invalid values ['LOPS-TestRunner', 'Signatera WES']
LOPS-8833	Task	Closed	—	Improve Quant Concentration autotests	products: invalid values ['Signatera WES']
LOPS-8822	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Fix Platform tests	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8815	Story	Closed	Ize Imai	Enable BAM merge support for WGS tissue samples	products: invalid values ['Signatera GHP']
LOPS-8778	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8777	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8776	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8775	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8774	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8772	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251006	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8744	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Primer Design InProgress step with PASSED metrics	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8737	Story	Verified	Kevin Detweiler	WES/Sig GHP: Update Extraction QC Max Threshold for Tissue CLIA Sample and Tissue Control	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8702	Task	Closed	—	Update auto code for creating Tissue slides at Accessioning step	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8693	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can create Primer Design plate	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8664	Task	Closed	—	Fix Platform tests	products: invalid values ['LOPS-TestRunner']
LOPS-8492	Task	Closed	Ray Ward	Retrieval of quant results for lib prep re-runs	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7963	Story	Verified	Ize Imai	[Back-End] LOPS: Verify receipt of Study ID from ARM Kafka Schema	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20250922 (52) (32 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9363	Story	Ready for SQA	Ize Imai	Update the paramlists to V2	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8738	Task	Closed	—	WES automated tests improvements after release 1.0.3.0	products: invalid values ['Signatera WES']
LOPS-8692	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8675	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8674	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8673	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8672	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8671	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8670	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250922	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8667	Task	Closed	Ize Imai	Updated sequencing run info Kafka schema design work	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8476	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing In Progress step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8475	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8474	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing Prep step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8473	Task	Closed	—	WGS - GUIDE - Verify that user can complete WGS Pool Prep step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8472	Task	Closed	—	WGS - GUIDE - Verify that user can upload Consolidation Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8351	Story	Verified	Monish Grover	Sequencing: WES Sequencing In Progress	products: invalid values ['Signatera WES']
LOPS-8279	Task	Closed	—	WES/WGS 1.0.3.0 - Jama & manual QA review/sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8278	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.3.0 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8277	Task	Closed	Ray Ward	WES/WGS 1.0.3.0 - Day-Before environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8276	Task	Closed	Ray Ward	WES/WGS 1.0.3.0 - RC environment deployment & testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8274	Task	Closed	Kevin Detweiler	WES/WGS 1.0.3.0 - Lab User Training Sessions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8273	Task	Closed	Kevin Detweiler	WES/WGS 1.0.3.0 - Create User Guides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8272	Epic	Closed	—	WES/WGS 1.0.3.0 - Deployment Prerequisites	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8269	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Serhii	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8268	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Dmitry	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8267	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.- - Dragana	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8266	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Mila	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8265	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8261	Task	Closed	—	WGS automated regression - WES/WGS 1.0.3.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8260	Task	Closed	—	WES automated regression - WES/WGS 1.0.3.0	products: invalid values ['Signatera WES']
LOPS-8259	Epic	Closed	—	WES/WGS 1.0.3.0 - Regression Testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8157	Story	Verified	Kevin Detweiler	Sequencing: WES Sequencing Review	products: invalid values ['Signatera WES']

LOPS WES/WGS 20250908 (51) (50 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8525	Task	Closed	—	WES/WGS 1.0.3.0 - Deployment latest versions of Kafka and Samrep on the testing environment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8471	Task	Closed	—	WGS - GUIDE - Verify that user can Download Consolidation Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8470	Task	Closed	—	WesOnX - GUIDE - Verify that user can 'Accept All' at Capture QC Review step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8469	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Results	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8468	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Run Details	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8467	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Capture Enrichment Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8466	Task	Closed	—	WesOnX - GUIDE - Verify that user can Download Capture Enrichment Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8465	Task	Closed	—	WesOnX - GUIDE - Verify that user can perform Hyb ATC Run Details	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8464	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Pre-Capture Pooling Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8463	Task	Closed	—	WesOnX - GUIDE - Verify that user can download Pre-Capture Pooling Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8443	Task	Closed	Ize Imai	Assist with ANALYTICS-36559 for Nate Johnson	products: invalid values ['Signatera GHP']
LOPS-8432	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250908	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8431	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250908	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8430	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250908	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8429	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Promote results to source array for GTAPE	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8428	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Promote results to source array for qPCR	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8427	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250908	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8422	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can perform Upload qPCR Results Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8394	Story	Verified	Monish Grover	Sequencing: Updates to Menu and Sidebar	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8360	Story	Verified	Swati Giri	Sequencing: WES Primer Design In Progress	products: invalid values ['Signatera WES']
LOPS-8354	Story	Verified	Monish Grover	Sequencing: WGS Sequencing In Progress	products: invalid values ['Signatera GHP']
LOPS-8352	Task	Closed	Dennis Lin	Investigation of the "Add to Lops EPS Tickets"	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8350	Story	Verified	Dennis Lin	Refactor Histology Create Tissue Slides return to Histo Accessioning Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8305	Task	Closed	Ray Ward	Investigate- Incidents not being created correctly	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8275	Task	Closed	—	WES/WGS 1.0.3.0 - PSPC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8270	Story	Verified	Dennis Lin	Sequencing: Update GUI Policy to Lock Sidebar	products: invalid values ['Signatera WES']
LOPS-8262	Task	Closed	—	WES/WGS 1.0.3.0 - Manual test plan creation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8247	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Library QC Review, AcceptAll samples	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8246	Task	Closed	—	WES - GUIDE - Verify that user can perform Library Quant Results Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8245	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WES - GUIDE - Verify that user can perform Library Quant Plating Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8244	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WES - GUIDE - Verify that user can Download Library Quant Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8243	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can perform Upload Tapestation Results Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8242	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can Upload Tapestation Plate Setup	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8241	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can Download Tapestation Plate Setup	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8240	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can Upload qPCR Plate Setup	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8239	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can Download qPCR Plate Setup	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8210	Story	Verified	Dennis Lin	Sequencing: WGS New Sequencing Prep Run Details Task	products: invalid values ['Signatera GHP']
LOPS-8163	Story	Verified	Kevin Detweiler	Sequencing: WGS Sequencing	products: invalid values ['Signatera GHP']
LOPS-8162	Story	Verified	Swati Giri	Sequencing: WGS Sequencing Prep	products: invalid values ['Signatera GHP']
LOPS-8161	Story	Verified	Dennis Lin	Sequencing: WGS Pool Prep	products: invalid values ['Signatera GHP']
LOPS-8158	Story	Verified	Swati Giri	Sequencing: WES Primer Design Review	products: invalid values ['Signatera WES']
LOPS-8156	Story	Verified	Abdul Aziz	Sequencing: WES Sequencing	products: invalid values ['Signatera WES']
LOPS-8154	Story	Verified	Swati Giri	Sequencing: WES Capture QC Review	products: invalid values ['Signatera WES']
LOPS-8152	Story	Verified	Swati Giri	Sequencing: WES Capture Quant	products: invalid values ['Signatera WES']
LOPS-8151	Story	Verified	Swati Giri	Sequencing: WES Capture Enrichment	products: invalid values ['Signatera WES']
LOPS-8122	Task	Closed	Dennis Lin	Add samples back to u_sourcesamples table	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8094	Story	Verified	Swati Giri	Sequencing: WES Hyb ATC Page	products: invalid values ['Signatera WES']
LOPS-8089	Story	Closed	Monish Grover	Create Sequencing Sitemap for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7722	Task	Closed	Ray Ward	GMED audit preparation - LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6234	Story	Verified	Dennis Lin	Hybridization Thermal Cycler: Support 'Hybridization Thermal Cycler' Run Details Task	products: invalid values ['Signatera WES']

LOPS WES/WGS 20250825 (50) (59 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9452	Defect	Verified	Dennis Lin	After 'Accept Partial' on QC Review page, WLP2 plate is not present on the Hybrid Capture page	products: invalid values ['Signatera WES']
LOPS-8410	Task	Closed	Ize Imai	Knowledge share for Data File Definitions in LV1.0	products: invalid values ['Panorama V4']
LOPS-8378	Defect	Verified	—	Button name "Hybrid Capture Run Details"	products: invalid values ['Signatera WES']
LOPS-8362	Story	Verified	Swati Giri	Sequencing: WGS Primer Design In Progress	products: invalid values ['Signatera GHP']
LOPS-8355	Tweak	Closed	Ize Imai	Modify sgNIPT test to improve pipeline test passing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8331	Task	Closed	Ize Imai	Merge second epatch (1.0.2.2) to weswgs-master and propagate to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8307	Defect	Verified	Kevin Detweiler	Library Prep- Users are not seeing GWLP2 plate in qPCR Tapestation page	products: invalid values ['Signatera GHP']
LOPS-8306	Defect	Closed	—	Library Prep- Fragmentation step does not provide page for inputting instruments	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8304	Defect	Closed	Dennis Lin	Histology- Creating tissue slides returns users to Histo Accessioning page without block	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8295	Defect	Verified	Dennis Lin	Update to NtrDissection task to include HE Slides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8294	Defect	Verified	Kevin Detweiler	Updates to WES Extraction Quant Query	products: invalid values ['Signatera WES']
LOPS-8286	Task	Closed	Ize Imai	Merge weswgs-master (1.0.2.0) and epatch (1.0.2.1) to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8284	Task	Closed	Dmitry Piskunov	WgsOnX - GUIDE - Adjust WES Blood Extraction steps for WGS	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8264	Task	Closed	—	WES/WGS 1.0.3.0 - WGS test case creation	products: invalid values ['Signatera GHP']
LOPS-8263	Task	Closed	—	WES/WGS 1.0.3.0 - WES test case creation	products: invalid values ['Signatera WES']
LOPS-8248	Task	Closed	—	WesOnX/WGS - GUIDE - Create TissueDnaReviewApi	products: invalid values ['LOPS-TestRunner']
LOPS-8238	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Upload Library Amp Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8237	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Download Library Amp Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8236	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Upload Library Prep Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8235	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Download Library Prep Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8234	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can complete Fragmentation step	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8233	Task	Closed	Dmitry Piskunov	WesOnX/WGS - GUIDE - Verify that user can Upload Normalization Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-8232	Task	Closed	Dmitry Piskunov	WesOnX/WGS - GUIDE - Verify that user can download Normalization Worklist	products: invalid values ['LOPS-TestRunner', 'Signatera GHP', 'Signatera WES']
LOPS-8231	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction QC Review -> AcceptAll samples	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8230	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction Quant Result Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8229	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction Quant Plating Rundata	products: invalid values ['LOPS-TestRunner', 'Signatera GHP']
LOPS-8205	Defect	Closed	—	Filler gDNA samples are not displayed on 'WES/WGS Blood Extraction Samples' page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8202	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250825	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8196	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250825	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8195	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250825	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8193	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250825	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8182	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Rack to Plate step	products: invalid values ['LOPS-TestRunner']
LOPS-8181	Task	Closed	—	WesOnX - GUIDE - Verify that user can create WES Blood Filler Sample	products: invalid values ['LOPS-TestRunner']
LOPS-8180	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Extraction step	products: invalid values ['LOPS-TestRunner']
LOPS-8179	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Review page	products: invalid values ['LOPS-TestRunner']
LOPS-8155	Story	Verified	Swati Giri	Sequencing: WES Sequencing Prep	products: invalid values ['Signatera WES']
LOPS-8132	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0-Mila	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8093	Story	Verified	Monish Grover	Sequencing: WES HybridCapture Page	products: invalid values ['Signatera WES']
LOPS-8090	Story	Verified	Swati Giri	Create Sequencing Sidebar for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8047	Story	Verified	Abdul Aziz	Library Prep & QC: Array list of Extraction Quant Samples is Grouped by Sample Subtype	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8045	Task	Closed	—	WES/WGS 1.0.2.0 - Jama & DotCompliance sign-off	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8043	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.2.0 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8042	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - Preprod environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8041	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - Day-Before environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8020	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8016	Epic	Closed	—	WES/WGS 1.0.2.0 - Regression Testing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7967	Defect	Verified	Monish Grover	Library Prep & QC: Update Extraction Quant Count to only include TDNA Plates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7913	Defect	Verified	Ize Imai	Align repo WES Sequencing array method parameter item IDs with production values	products: invalid values ['Signatera WES']
LOPS-7809	Story	Verified	Swati Giri	Library Prep & QC Jobtype and Page Security Updates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7805	Story	Verified	Kevin Detweiler	Library Prep & QC: WES & WGS Extraction QC Review Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7796	Story	Verified	Monish Grover	Library Prep & QC: WES Library Quant Pages	products: invalid values ['Signatera WES']
LOPS-7795	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library Amp Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7793	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Library Prep Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7791	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Fragmentation Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7789	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Normalization Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7787	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library QC Review Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7786	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Extraction Quant Pages	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7784	Story	Verified	Swati Giri	Create Library Prep & QC Sidebar for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7783	Story	Verified	Monish Grover	Create Library Prep & QC Sitemap for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20250811 (49) (45 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8121	Task	Closed	Ize Imai	Merge weswgs-master (1.0.1.2) to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8080	Tweak	Closed	Ize Imai	WES/WGS Update trackitem.u_containerbarcode column length	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8053	Task	Closed	Dmitry Piskunov	WesOnX - GUIDE - Verify the completion of Blood Extraction Results Review task	products: invalid values ['LOPS-TestRunner', 'Signatera WES']
LOPS-8040	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - RC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8039	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - PSPC environment deployment	products: empty
LOPS-8038	Task	Closed	Kevin Detweiler	WES/WGS 1.0.2.0 - Lab User Training Sessions	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8037	Task	Closed	Kevin Detweiler	WES/WGS 1.0.2.0 - Create User Guides	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8034	Story	Verified	Dennis Lin	Histopathology: View pathologist's H&E Data Entry information on Tumor Tissue Dissection Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8023	Task	Closed	—	WES/WGS 1.0.2.0 - Manual test plan creation	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8022	Task	Closed	—	WES/WGS 1.0.2.0 - WGS test case creation	products: invalid values ['Signatera GHP']
LOPS-8021	Task	Closed	—	WES/WGS 1.0.2.0 - WES test case creation	products: invalid values ['Signatera WES']
LOPS-8018	Task	Closed	—	WGS automated regression - WES/WGS 1.0.2.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8017	Task	Closed	—	WES automated regression - WES/WGS 1.0.2.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8015	Task	Closed	Ize Imai	Toggle off auto assign reviewers for WESWGS merge request bot	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8004	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250811	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8003	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250811	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8000	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250811	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7999	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250811	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7993	Task	Closed	Dmitry Piskunov	Automate TC "Verify that user can records Blood Extraction Run Details"	products: invalid values ['LOPS-TestRunner', 'Signatera WES']
LOPS-7985	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.1.2 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7984	Task	Closed	Ray Ward	WES/WGS 1.0.1.2 - Day-Before environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7962	Story	Verified	Dennis Lin	WES/WGS Create task to resend assay complete message in bulk (repo update)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7957	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.2	products: invalid values ['Signatera GHP']
LOPS-7956	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.2	products: invalid values ['Signatera WES']
LOPS-7951	Tweak	Closed	Ize Imai	Allow EPS to view the Sequencing Prep volume information of HYB2 plate	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7943	Story	Verified	Swati Giri	Histology: Move Assay Description to be between Natera Barcode and File Storage Number (Tumor Tissue Dissection Page)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7942	Defect	Verified	Dennis Lin	Histology: Ensure that users will be returned to the Histo Accn page after entering File Storage #, creating tissue slid	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7936	Defect	Verified	Monish Grover	Extraction: Ensure that counter matches # of samples in Extraction Sample queue	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7935	Story	Verified	Kevin Detweiler	Extraction: Performance Enhancements for Box List (Rack to plate page)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7932	Story	Verified	Dennis Lin	Extraction: Update filter to remove Disposed Plates from WES/WGS Blood Extraction, WES/WGS DNA Extraction and WES/WGS Ti	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7931	Story	Verified	Abdul Aziz	Extraction: Update filters on Sample Receipt page to remove Positive Controls	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7927	Story	Verified	Dennis Lin	Histopathology: Remove # of Slides (Raw Value) during Data Entry	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7922	Story	Verified	Ray Ward	WES/WGS During Primer Design Assay Creation, fetch only "Selected" source samples from Blood and Tissue Assays	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7920	Story	Verified	Abdul Aziz	Histology: Update filter to remove Disposed samples from H&E staining and Tumor Tissue Dissection page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7895	Defect	Verified	Monish Grover	Unexpected Active Array Method on WGS Tissue DNA Review‎	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7881	Tweak	Closed	Jesus Zazueta	WES/WGS - Sync master branch with lab instance master branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7871	Story	Verified	Swati Giri	Histology: Candidate for rework data entry location for external cases	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7870	Story	Verified	Abdul Aziz	Extraction: Inform users if sample has been plated already or is a rework sample	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7869	Story	Verified	Kevin Detweiler	Histology: Ability to edit file storage # on Accessioning and Sample Manage Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7867	Story	Verified	Kevin Detweiler	Histology: Display number of cases in sidebar under Tumor Tissue Dissection	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7866	Story	Verified	Abdul Aziz	Histology: Display Assay Description under internal step in Tumor Tissue Dissection>Create TXE Tube	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7858	Task	Closed	Ize Imai	Merge weswgs-master to project branches	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7808	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant Tapestation Pages	products: invalid values ['Signatera GHP']
LOPS-7807	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant qPCR Pages	products: invalid values ['Signatera GHP']
LOPS-7727	Story	Verified	Dennis Lin	Allow EPS access to the "remove" button in the source samples element	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS WES/WGS 20250728 (48) (107 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9846	Sub-task	Opened	Peter Riggs	Create new Worklist Generator policy for GHPv2 Blood Extraction	products: empty
LOPS-9623	Defect	Closed	Kevin Detweiler	CLONE - Wrong tramstop name on Extraction Menu landing page	products: invalid values ['Signatera GHP']
LOPS-9622	Story	Closed	Monish Grover	CLONE - Extraction: WGS/WES Blood Download Worklist Count	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9621	Story	Ready for SQA	Peter Riggs	GHPv2 - Extraction Sitemap URL Links for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9619	Story	In Progress	Peter Riggs	GHPv2 -Extraction: GHPv2 Blood Download Worklist	products: invalid values ['Signatera GHP']
LOPS-9618	Story	In Progress	Peter Riggs	GHPv2 - Extraction: Blood Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-9617	Story	In Progress	Peter Riggs	GHPv2 -Extraction: WGS Blood Extraction Page	products: invalid values ['Signatera GHP']
LOPS-9616	Story	In Progress	Peter Riggs	GHPv2 -Create Extraction Sidebar	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9615	Story	Closed	Monish Grover	GHPv2 - Create Extraction Sitemap	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9613	Story	In Progress	Peter Riggs	GHPv2 Extraction: GHPv2 Tissue DNA Review Page	products: invalid values ['Signatera GHP']
LOPS-9612	Story	Closed	Kevin Detweiler	GHPv2- GHPv2 Extraction Sample Page - Order by Run Number	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9611	Story	Closed	Kevin Detweiler	GHPv2 - Extraction and Histology Jobtype and Page Security Updates	products: invalid values ['Signatera WES']
LOPS-9610	Story	Closed	Kevin Detweiler	GHPv2 - Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	products: invalid values ['Signatera GHP']
LOPS-9609	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Rack to Plate	products: invalid values ['Signatera GHP']
LOPS-9608	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue DNA Extraction Page	products: invalid values ['Signatera WES']
LOPS-9607	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2Tube Verification Page	products: invalid values ['Signatera GHP']
LOPS-9606	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tube-to-Rack Page	products: invalid values ['Signatera GHP']
LOPS-9605	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Lysis and Decrosslinking Page	products: invalid values ['Signatera GHP']
LOPS-9604	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Deparaffinization Page	products: invalid values ['Signatera GHP']
LOPS-9603	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Select Tissue Page	products: invalid values ['Signatera GHP']
LOPS-9602	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-7954	Task	Closed	Dennis Lin	WES/WGS Create task to resend assay complete message in bulk (manual deployment)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7882	Task	Closed	Ray Ward	WES/WGS 1.0.1.0 - Preprod environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7880	Defect	Verified	—	Wrong 'Histo Sample Receipt' page name	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7879	Task	Closed	Jesus Zazueta	Improve check ear file on deployment scripts to WES/WGS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7878	Defect	Verified	Kevin Detweiler	Wrong tramstop name on Extraction Menu landing page	products: invalid values ['Signatera GHP']
LOPS-7864	Defect	Closed	—	Fail & Re-Extract sample issue	products: invalid values ['Signatera WES']
LOPS-7855	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.1.0 to weswgs-master	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7853	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS Sprint 20250728	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7852	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS Sprint 20250728	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7851	Task	Closed	Kevin Detweiler	Create User Guides and Perform Lab User Training Sessions	products: empty
LOPS-7850	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250728	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7838	Defect	Verified	Swati Giri	Histopathology Incident page shows an error	products: invalid values ['Signatera WES']
LOPS-7830	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Dragana	products: empty
LOPS-7829	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Mila	products: empty
LOPS-7828	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Serhii	products: empty
LOPS-7748	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - Day-Before environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7747	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - RC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7746	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - PSPC environment deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7745	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.1.0	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7744	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.0	products: invalid values ['Signatera GHP']
LOPS-7743	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.0	products: invalid values ['Signatera WES']
LOPS-7735	Story	Verified	Kevin Detweiler	Histology: Add link to Assay ID on Data Entry page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7699	Story	Verified	Kevin Detweiler	Extraction Sample Page - Order by Run Number	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7690	Story	Verified	Swati Giri	Histology: Update to Histology Jobtypes and Security	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7689	Story	Verified	Kevin Detweiler	Extraction: Update Rack to Plate counter to reflect number of boxes ready for Rack to Plate	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7688	Story	Verified	Kevin Detweiler	Extraction: Create Filler Samples page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7687	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Review Page	products: invalid values ['Signatera WES']
LOPS-7686	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Review Page	products: invalid values ['Signatera WES']
LOPS-7664	Task	Closed	Ize Imai	Disable auto_api_user in PROD (weswgs)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7660	Story	Verified	Kevin Detweiler	Extraction and Histology Jobtype and Page Security Updates	products: invalid values ['Signatera WES']
LOPS-7659	Story	Verified	Kevin Detweiler	Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	products: invalid values ['Signatera GHP']
LOPS-7617	Story	Closed	Monish Grover	Extraction: Update Blood Extraction Page to link Run Detail Task to Button	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7605	Story	Verified	Monish Grover	Extraction: Update Tube to Rack Task to allow for Take Custody of Box	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7565	Story	Verified	Kevin Detweiler	Extraction: WES/WGS Select Tissue Gizmo update Counter	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7560	Story	Verified	Monish Grover	Extraction: WGS/WES Blood Download Worklist Count	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7555	Defect	Verified	Dennis Lin	WES Sequencing array method broken during merge	products: invalid values ['Signatera WES']
LOPS-7548	Story	Verified	Kevin Detweiler	Extraction Sitemap URL Links for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7521	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Extraction Page	products: invalid values ['Signatera WES']
LOPS-7520	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Extraction Page	products: invalid values ['Signatera WES']
LOPS-7518	Story	Verified	Kevin Detweiler	Extraction: WES Rack to Plate	products: invalid values ['Signatera WES']
LOPS-7516	Story	Verified	Kevin Detweiler	Extraction: WGS Rack to Plate	products: invalid values ['Signatera GHP']
LOPS-7514	Story	Verified	Kevin Detweiler	Extraction: WGS Tube Verification Page	products: invalid values ['Signatera GHP']
LOPS-7513	Story	Verified	Kevin Detweiler	Extraction: WES Tube Verification Page	products: invalid values ['Signatera WES']
LOPS-7512	Story	Verified	Kevin Detweiler	Extraction: WES Tube-to-Rack Page	products: invalid values ['Signatera WES']
LOPS-7511	Story	Verified	Kevin Detweiler	Extraction: WGS Tube-to-Rack Page	products: invalid values ['Signatera GHP']
LOPS-7509	Story	Verified	Kevin Detweiler	Extraction: WGS Lysis and Decrosslinking Page	products: invalid values ['Signatera GHP']
LOPS-7508	Story	Verified	Kevin Detweiler	Extraction: WES Lysis and Decrosslinking Page	products: invalid values ['Signatera WES']
LOPS-7507	Story	Verified	Kevin Detweiler	Extraction: WES Deparaffinization Page	products: invalid values ['Signatera WES']
LOPS-7506	Story	Verified	Kevin Detweiler	Extraction: WGS Deparaffinization Page	products: invalid values ['Signatera GHP']
LOPS-7505	Story	Verified	Kevin Detweiler	Extraction: WGS Select Tissue Page	products: invalid values ['Signatera GHP']
LOPS-7504	Story	Verified	Kevin Detweiler	Extraction: WES Select Tissue Page	products: invalid values ['Signatera WES']
LOPS-7501	Story	Verified	Monish Grover	Extraction: WES AND WGS Extraction Samples Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7500	Story	Verified	Monish Grover	Extraction: WGS Blood Extraction Page	products: invalid values ['Signatera GHP']
LOPS-7499	Story	Verified	Monish Grover	Extraction: WES Blood Extraction Page	products: invalid values ['Signatera WES']
LOPS-7498	Story	Verified	Monish Grover	Extraction: WES Blood Download Worklist	products: invalid values ['Signatera WES']
LOPS-7497	Story	Verified	Monish Grover	Extraction: WGS Blood Download Worklist	products: invalid values ['Signatera GHP']
LOPS-7494	Story	Verified	Kevin Detweiler	Extraction: WES Blood Sample Receipt Page	products: invalid values ['Signatera WES']
LOPS-7493	Story	Verified	Kevin Detweiler	Extraction: WGS Blood Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-7492	Story	Verified	Kevin Detweiler	Extraction: WES Tissue Sample Receipt Page	products: invalid values ['Signatera WES']
LOPS-7490	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-7485	Story	Verified	Swati Giri	Histology: WES/WGS Incidents Page	products: invalid values ['Signatera GHP']
LOPS-7483	Story	Verified	Swati Giri	Histology: WES/WGS Tissue Return Page	products: invalid values ['Signatera WES']
LOPS-7482	Story	Closed	—	Histology: WGS Tissue Return Page	products: invalid values ['Signatera GHP']
LOPS-7481	Story	Verified	Swati Giri	Histology: WES/WGS Dissection Page	products: invalid values ['Signatera WES']
LOPS-7477	Story	Verified	Swati Giri	Histology: WES/WGS Pathology Review Page	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7475	Story	Verified	Swati Giri	Histology: WES/WGS H&E Staining Page	products: invalid values ['Signatera WES']
LOPS-7473	Story	Verified	Swati Giri	Histology: WES/WGS Embedding Page	products: invalid values ['Signatera WES']
LOPS-7472	Story	Closed	Swati Giri	Histology: WGS Sample Receipt Page	products: invalid values ['Signatera GHP']
LOPS-7466	Story	Verified	Ray Ward	Improvements to Assay QC NtrSampleAnalysisReview page for performance	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7459	Story	Closed	Swati Giri	Histology: WGS Microtomy Page	products: invalid values ['Signatera GHP']
LOPS-7458	Story	Verified	Swati Giri	Histology: WES/WGS Microtomy Page	products: invalid values ['Signatera WES']
LOPS-7455	Story	Closed	Swati Giri	Histology: WGS Accessioning Page	products: invalid values ['Signatera GHP']
LOPS-7454	Story	Verified	Swati Giri	Histology: WES/WGS Accessioning Page	products: invalid values ['Signatera WES']
LOPS-7453	Story	Verified	Monish Grover	Create Extraction Sidebar for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7452	Story	Verified	Monish Grover	Create Extraction Sitemap for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7449	Story	Verified	Swati Giri	Create Histology Sidebar for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7448	Story	Verified	Swati Giri	Create Histology Sitemap for GUIDE Project	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7446	Story	Verified	Swati Giri	Histology: Sample Receipt Page	products: invalid values ['Signatera WES']
LOPS-7015	Story	Verified	Monish Grover	Active/Historical QC Batch List Pages: Support Actions: Archive/UnArchive	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6902	Story	Ready for Development	Abdul Aziz	Download Normalization Worklist - WES & WGS - Code Updates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6798	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WES - Master Data Updates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6612	Story	Verified	Monish Grover	WES/WGS: Auto-Archive Arrays based on Create Date	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5454	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WGS - Code Updates	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-2449	Story	Closed	—	Re-batching implementation	products: invalid values ['Signatera GHP']
LOPS-2284	Story	Closed	—	Re-batching for normalization	products: invalid values ['Signatera GHP']
LOPS-1911	Story	Development Blocked	Surbhi Ray	Current Volume Tracking - WES - Code Updates	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS Production Support Issues (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9791	Defect	In Grooming	—	Hide functionality to Add source sample to existing Assay as part of EPS Admin Role	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9777	Task	Opened	—	Slow load times for the "Select Tissue Samples" pages; anomalous "Run Number" values for WGS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9766	Defect	Opened	—	Update transaction type ITT000013	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9751	Story	Opened	—	Implementation of a run-/batch-level “minimum patient samples passed” threshold for Assay QC	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9709	Task	Opened	—	Prevent Loading of Sample(s) on a Complete Plate	products: invalid values ['Signatera GHP']
LOPS-9688	Defect	Opened	—	Assay attributes trim value or warning validation for extra spaces and new lines	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-9684	Task	Opened	—	Investigation: SEQ plates unexpectedly not moving to "WES Sequencing"	products: invalid values ['Signatera WES']
LOPS-9625	Task	Opened	—	Allow Administrator role to update status to Selected, RETAIN, or ARCHIVE	products: empty
LOPS-9532	Defect	Opened	—	LOPS showing "Overflow" as a value for concentration. Prevents uploading of Lib Quant Results File	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8515	Tweak	Opened	—	Allow Lab Managers or Supervisors to update Plate barcodes.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8445	Defect	Closed	—	Prevent WES/WGS Primer Designs from being created if their associated Blood or Tissue Assay have a failed disposition	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8174	Story	Opened	—	Removal of the WES flowcell uniqueness check	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8173	Story	Opened	—	Stop storing unnecessary sequencing run fields in LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8172	Story	Opened	—	Removal of the flowcell instrument & side check	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-8169	Story	Opened	—	Prevent duplicate SELECT samples from being registered in LOPS	products: invalid values ['Signatera GHP', 'Signatera WES']

LOPS HiHx Impl Sprint 1 M1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2059	Story	Ready for SQA	Ize Imai	Extraction Configuration	products: invalid values ['Horizon X']
LOPS-2058	Story	Ready for SQA	Ize Imai	Dataset/Parameters	products: invalid values ['Horizon X']

LOPS WH 20260601 (70) (M24) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9915	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 44 with M19.	products: empty
LOPS-9914	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 43 with M19.	products: empty
LOPS-9811	Task	Opened	—	gDNA pool Quant runlog not accepted by LOPS	products: invalid values ['sgNIPT']
LOPS-9630	Story	Ready for Development	Michael Livingston	Guided Workflow Guardrails	products: invalid values ['sgNIPT']
LOPS-9513	Task	Opened	—	Spike - Investigate LOPS AI Assistant for Support and General Questions	products: invalid values ['sgNIPT']
LOPS-9365	Story	Opened	—	Update LRPCR Primer reagent container amounts and LRPCR Barcoding AM decrement amounts	products: invalid values ['sgNIPT']

LOPS WH 20260518 (69) (M23) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9526	Task	Opened	Bob Ruff	Lib AMP step with barcode primers	products: invalid values ['sgNIPT']
LOPS-9149	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Prep Final Dilution	products: empty
LOPS-9147	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Run	products: empty
LOPS-9070	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Run	products: invalid values ['sgNIPT']
LOPS-9067	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Prep Final Dilution	products: invalid values ['sgNIPT']

LOPS WH 20260504 (68) (M22) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9859	Story	Opened	Michael Livingston	SPRQ work sprint 3	products: invalid values ['sgNIPT']
LOPS-8864	Story	In Grooming	Bob Ruff	Sidebar Development -Assay 44	products: invalid values ['sgNIPT']

LOPS WH 20260420 (67) (M21) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9858	Story	In Grooming	Michael Livingston	SPRQ work sprint 2	products: invalid values ['sgNIPT']
LOPS-9400	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Sidebar Development - Assay 43	products: empty
LOPS-8860	Story	Ready for Development	Bob Ruff	Sidebar Development - Assay 43	products: invalid values ['sgNIPT']

LOPS WH 20260406 (66) (M20) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9857	Story	In Grooming	Michael Livingston	SPRQ work sprint 1	products: invalid values ['sgNIPT']
LOPS-9047	Story	In Grooming	Bob Ruff	Improvement - avoid stuck analysis runs	products: invalid values ['sgNIPT']
LOPS-8348	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Ability to add Racking Retest to Parent samples easily through known children samples	products: empty
LOPS-8107	Story	Ready for Development	Bob Ruff	Ability to add Racking Retest to Parent samples easily through known children samples	products: invalid values ['sgNIPT']

LOPS WH 20260323 (65) (M19) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9814	Task	Ready for Development	Bob Ruff	Select more than 88 samples in verso.	products: invalid values ['sgNIPT']
LOPS-9700	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Add additional sample identifier to Verso sample list	products: invalid values ['sgNIPT']
LOPS-9629	Story	In Grooming	Michael Livingston	new entry point for Prof Samples	products: invalid values ['sgNIPT']
LOPS-9514	Story	In Progress	Michael Livingston	Deployment Strategy to Reduce or eliminate down time	products: invalid values ['sgNIPT']
LOPS-6576	Story	Ready for Development	Bob Ruff	Add additional sample identifier to Verso sample list	products: invalid values ['sgNIPT']
LOPS-5154	Story	In Grooming	Bob Ruff	LOPS support for Verso batching - sample disposal	products: invalid values ['sgNIPT']

LOPS WH 20260309 (64) (M18) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9913	Task	In Grooming	Kristina Feller	2026 Q1: Determine total number of clicks to run through Assay 44 with M17.	products: empty
LOPS-9912	Task	In Grooming	Kristina Feller	2026 Q1: Determine total number of clicks to run through Assay 43 with M17.	products: empty
LOPS-9646	Defect	In Grooming	Michael Livingston	Samples with failing specs should be skipped in QC Batch	products: invalid values ['sgNIPT']
LOPS-9590	Defect	Ready for Development	Bob Ruff	cfDNA Pool Quant Review Plate status and Sample Status are not updated after ReQuant QC Review is performed	products: invalid values ['sgNIPT']
LOPS-9485	Defect	In Grooming	Michael Livingston	Update Bulk Retest to allow retesting when aliquot samples are in the same sample genealogy	products: invalid values ['sgNIPT']
LOPS-9401	Sub-task	Ready for Development	Bob Ruff	Dev Testing - cfDNA Pool Quant QC Review - ReQuant cannot be performed	products: empty
LOPS-9355	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Update Calculation for sgNIPT cfDNA Pool Quant Review	products: empty
LOPS-9333	Sub-task	Ready for Development	Michael Livingston	Dev Testing - pool dilution worklist for HC query does not account for retests	products: empty
LOPS-9326	Story	Ready for Development	Michael Livingston	cfDNA pool dilution worklist for HC query does not account for retests	products: invalid values ['sgNIPT']
LOPS-9320	Tweak	In Grooming	Michael Livingston	Disable user from generating cfDNA Hyb Day 1 worklist using "Download Worklist" button	products: invalid values ['sgNIPT']
LOPS-9166	Defect	Ready for Development	Bob Ruff	cfDNA Pool Quant QC Review - ReQuant cannot be performed	products: invalid values ['sgNIPT']
LOPS-8898	Story	Ready for Development	Bob Ruff	Update Calculation for sgNIPT cfDNA Pool Quant Review	products: invalid values ['sgNIPT']
LOPS-8103	Task	Ready for Development	Bob Ruff	Status IQ view plates associated to processed steps	products: empty

LOPS WH 20260223 (63) (M17) (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10051	Sub-task	Closed	—	Dev Testing - CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	products: empty
LOPS-9953	Task	Opened	Kristina Feller	SgNIPT Automated Regression for 1.0.16.0	products: empty
LOPS-9921	Defect	Closed	Michael Livingston	Control Swap process shouldn't swap controls from plates when they are still in progress	products: invalid values ['sgNIPT']
LOPS-9917	Task	In Progress	Michael Livingston	Spike: Investigate work required to allow sample to proceed with cfDNA extraction even if gDNA extraction fails	products: empty
LOPS-9911	Task	In Progress	Kristina Feller	Determine total number of clicks to run through Assay 44 prior to automated runlog processing and guided workflows (base	products: invalid values ['sgNIPT']
LOPS-9910	Task	Closed	Kristina Feller	Determine total number of clicks to run through Assay 43 prior to automated runlog processing and guided workflows (base	products: invalid values ['sgNIPT']
LOPS-9908	Task	In Progress	Michael Livingston	SPIKE: Investigate impact of changing to a standardized 2 streck kit.	products: empty
LOPS-9854	Task	Ready for Development	—	Data request: Request Run details for the LRPCR runs	products: invalid values ['sgNIPT']
LOPS-9792	Story	Verified	Michael Livingston	Support Gene Retesting in Worklist and RunLog Processing	products: invalid values ['sgNIPT']
LOPS-9701	Task	Closed	Bob Ruff	Please investigate potential missing barcodes in LV.LOPS.S_SAMPLE table	products: invalid values ['sgNIPT']
LOPS-9692	Task	Closed	Bob Ruff	Runlog service ECR Docker Registry Migration	products: invalid values ['sgNIPT']
LOPS-9690	Sub-task	In Progress	Bob Ruff	Dev Testing - cfDNA Pool Quant QC Review - Accept Partial cannot be performed	products: invalid values ['sgNIPT']
LOPS-9165	Defect	Ready for SQA	Bob Ruff	cfDNA Pool Quant QC Review - Accept Partial cannot be performed	products: invalid values ['sgNIPT']
LOPS-8840	Task	Code Review	Michael Livingston	[Data] Generate sgNIPT data product for Analytics team to build sequencing ops dashboard	products: invalid values ['sgNIPT']
LOPS-8804	Tweak	Code Review	Brandon Culver	Breakdown of samples run through sequencing per gene.	products: invalid values ['sgNIPT']
LOPS-8339	Story	Ready for SQA	Mehmet Ali Eken	Implement dirty data resolving mechanism when getting sample data from LIMS	products: invalid values ['sgNIPT']
LOPS-8338	Story	Ready for SQA	Mehmet Ali Eken	Send notification to LIMS when sample is disposed/biobanked in LOPS	products: invalid values ['sgNIPT']
LOPS-8337	Story	Ready for SQA	Mehmet Ali Eken	Implement authentication logic to connect to LIMS API	products: invalid values ['sgNIPT']
LOPS-8336	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge sample disposal message processing	products: invalid values ['sgNIPT']
LOPS-8335	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge assay request message processing	products: invalid values ['sgNIPT']
LOPS-8190	Story	In SQA Review	Michael Livingston	CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	products: invalid values ['sgNIPT']
LOPS-8100	Task	Code Review	Brandon Culver	Status IQ: allow users to find which Master Mix ingredient was used where	products: empty

GHPv2 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	products: invalid values ['Signatera GHP']
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	products: invalid values ['Signatera GHP']
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	products: invalid values ['Signatera GHP']
LOPS-9541	Story	Opened	—	PD Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	products: invalid values ['Signatera GHP']
LOPS-9540	Story	Opened	—	Convert LOPS->PD Pipeline Launch Message from Kafka to REST API	products: invalid values ['Signatera GHP']
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 9 (24) (32 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3671	Tweak	Closed	Brad Garrett	Finish Library Prep - Tissue	products: invalid values ['Signatera GHP']
LOPS-3670	Tweak	Closed	Brad Garrett	Start Library Prep - Tissue	products: invalid values ['Signatera GHP']
LOPS-3664	Story	Closed	Brad Garrett	Finish Normalization - Tissue	products: invalid values ['Signatera GHP']
LOPS-3615	Task	Closed	Hani Yakan	Update WES and WGS Workflow Scripts to Default All Samples to SELECT	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3573	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	products: invalid values ['Signatera GHP']
LOPS-3572	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail & Re-Extract	products: invalid values ['Signatera GHP']
LOPS-3522	Task	Closed	Hani Yakan	Copy existing devtools scripts from "Develop" branch to "LOPS-WESX-E2E"	products: invalid values ['Signatera WES']
LOPS-3515	Story	Closed	Jose Valdivieso	Worklist title for WGS blood extraction file	products: invalid values ['Signatera GHP']
LOPS-3503	Sub-task	Closed	Jose Valdivieso	Review WES workflow	products: empty
LOPS-3494	Defect	Closed	Mikhail Terpugov	Address Tissue Control in QCBatch steps causing an error in the AssignNextGroupTest event plan	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3447	Tweak	Closed	Ron Enson	Standardize 'Array Method' and 'Array Layout'	products: invalid values ['Signatera GHP']
LOPS-3436	Sub-task	Closed	—	Review WES Workflows	products: invalid values ['Signatera GHP']
LOPS-3431	Sub-task	Closed	—	Review WES workflows	products: invalid values ['Signatera GHP']
LOPS-3394	Defect	Closed	Klead Fusha	Sample Barcode is not displayed in BERR	products: invalid values ['Signatera GHP']
LOPS-3365	Sub-task	Closed	—	Review WES workflow in local	products: empty
LOPS-3363	Sub-task	Closed	—	Review Wes workflows in local	products: invalid values ['Signatera GHP']
LOPS-3358	Sub-task	Closed	—	Review Wes blood workflow in local	products: invalid values ['Signatera GHP']
LOPS-3356	Sub-task	Closed	Hani Yakan	Review Tissue WES-X workflow up to completing create QC Batch.	products: invalid values ['Signatera GHP']
LOPS-3355	Task	Closed	—	WES-X workflow practice for the G64 team	products: invalid values ['Signatera GHP']
LOPS-3277	Defect	Closed	Brad Garrett	WGS section in the Array List page contains various inconsistencies and misplaced buttons	products: invalid values ['Signatera GHP']
LOPS-3265	Defect	Closed	Hani Yakan	References to WES in Quant 384WellPlate Blood	products: invalid values ['Signatera GHP']
LOPS-3232	Defect	Closed	Ron Enson	Parameter value of Unknown samples not populated when viewed	products: invalid values ['Signatera GHP']
LOPS-3231	Defect	Closed	Ron Enson	Reagents parameter problem with default run log headers	products: invalid values ['Signatera GHP']
LOPS-2927	Story	Closed	Brad Garrett	Start Normalization - Tissue	products: invalid values ['Signatera GHP']
LOPS-2898	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction - platform	products: invalid values ['Signatera GHP']
LOPS-2837	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction	products: invalid values ['Signatera GHP']
LOPS-2836	Story	Closed	Brad Garrett	6-Rack To Plate	products: invalid values ['Signatera GHP']
LOPS-2524	Story	Closed	Mikhail Terpugov	Start Tapestation Plate Setup	products: invalid values ['Signatera GHP']
LOPS-2498	Task	Closed	Klead Fusha	Consolidation worklist generator and rundata processor	products: invalid values ['Signatera GHP']
LOPS-1944	Story	Closed	Klead Fusha	Start qPCR Plate Setup	products: invalid values ['Signatera GHP']
LOPS-1943	Story	Closed	Gianna Bell-Eunice	Finish Library Amp	products: invalid values ['Signatera GHP']
LOPS-1936	Story	Closed	Brad Garrett	Tissue Extraction Quantification	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 8 (23) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3460	Task	Closed	Hani Yakan	Copy existing devtools scripts from LOPS-DEV-21 to LOPS-MVP-21	products: invalid values ['Signatera WES']
LOPS-3455	Task	Closed	Klead Fusha	Spike Task: Investigate comparative effort between creating BERR copy and updating task to make configurable	products: invalid values ['Signatera GHP']
LOPS-3449	Story	Closed	Hani Yakan	Modify WGS Group TM to remove child sample plan details	products: invalid values ['Signatera GHP']
LOPS-3432	Story	Closed	Olawale Dada	Adding WGS TM to Tissue workflows	products: invalid values ['Signatera GHP']
LOPS-3411	Defect	Closed	Brad Garrett	QC Batch Data Entry throws an error	products: invalid values ['Signatera GHP']
LOPS-3395	Defect	Closed	Jose Valdivieso	QC Views Zone Data does not populate correctly	products: invalid values ['Signatera GHP']
LOPS-3380	Defect	Closed	Hani Yakan	Modify WGS-Tissue-Extraction-Workflow	products: invalid values ['Signatera GHP']
LOPS-3288	Story	Closed	Hani Yakan	Update-WGS-Tissue-Sample-Master-Data	products: invalid values ['Signatera GHP']
LOPS-3276	Task	Closed	Brad Garrett	Modify "Download WGS Worklist" menu	products: invalid values ['Signatera GHP']
LOPS-3110	Story	Closed	Klead Fusha	Support G64 extraction quant plate barcode suffixes	products: invalid values ['Signatera GHP']
LOPS-3077	Story	Closed	—	Validate controls for WGS Normalization - Test Only	products: invalid values ['Signatera GHP']
LOPS-2960	Task	Closed	Klead Fusha	Tissue Extraction Quantification Review - platform	products: invalid values ['Signatera GHP']
LOPS-2842	Task	Closed	Klead Fusha	4-Tube To Rack - platform	products: invalid values ['Signatera GHP']
LOPS-2783	Story	Closed	Olawale Dada	3-Lysis and decrosslinking Button and Master Data	products: invalid values ['Signatera GHP']
LOPS-2782	Story	Closed	Jose Valdivieso	2-Deparaffinization Button and Master Data	products: invalid values ['Signatera GHP']
LOPS-2780	Story	Closed	Brad Garrett	5-Tube Verification	products: invalid values ['Signatera GHP']
LOPS-2779	Story	Closed	Brad Garrett	4-Tube To Rack	products: invalid values ['Signatera GHP']
LOPS-1938	Story	Closed	Hani Yakan	Finish Normalization	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 7 (22) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3218	Task	Closed	Matt Smith	Port the WES workflow set-up script to WGS	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 6 (21) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2852	Story	Closed	Brad Garrett	Create WGS Blood workflows	products: invalid values ['Signatera GHP']
LOPS-1942	Story	Closed	Gianna Bell-Eunice	Start Library Amp	products: invalid values ['Signatera GHP']
LOPS-1941	Story	Closed	Gianna Bell-Eunice	Finish Library Prep	products: invalid values ['Signatera GHP']
LOPS-1940	Story	Closed	Ron Enson	Start Library Prep	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 5 (20) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3184	Tweak	Closed	Gianna Bell-Eunice	Update Samples Pending Receiving page to allow receipt of Samples with additional receiverequiredflag values	products: invalid values ['Signatera GHP']
LOPS-2959	Task	Closed	Hani Yakan	Merge LOPS-MVP-20 into LOPS-DEV-20	products: empty
LOPS-2833	Defect	Closed	Ron Enson	Blood Extraction Upload process throw issue that classification field is mandatory	products: invalid values ['Signatera GHP']
LOPS-2781	Story	Closed	Hani Yakan	1-Select Tissue Samples Button and Master Data	products: invalid values ['Signatera GHP']
LOPS-2451	Story	Closed	Ron Enson	Create WGS Library Prep Master Data	products: invalid values ['Signatera GHP']
LOPS-2225	Story	Closed	Hani Yakan	Process results for WGS extraction quant	products: invalid values ['Signatera GHP']
LOPS-2224	Story	Closed	Ron Enson	Process rundata for WGS extraction quant plate setup	products: invalid values ['Signatera GHP']
LOPS-2223	Story	Closed	Ron Enson	Generate worklist for WGS extraction quant plate setup	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 4 (19) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3239	Sub-task	Closed	—	Generate Blood Extraction Quant Worklist trows error: Required property 'worklistdir' not found in property list	products: invalid values ['Signatera GHP']
LOPS-2474	Story	Closed	Gianna Bell-Eunice	Create WGS Library Amp and WGS Library Prep Master Data	products: invalid values ['Signatera GHP']
LOPS-2378	Story	Closed	Hani Yakan	Create WGS Normalization Master Data	products: invalid values ['Signatera GHP']
LOPS-2259	Story	Closed	Brad Garrett	WGS Blood Extraction QC Review	products: invalid values ['Signatera GHP']
LOPS-2222	Story	Closed	Ron Enson	Create WGS extraction quant master data	products: invalid values ['Signatera GHP']
LOPS-2201	Story	Closed	Gianna Bell-Eunice	Page to review WGS blood extraction results	products: invalid values ['Signatera GHP']
LOPS-2200	Story	Closed	Gianna Bell-Eunice	Assay Template for WGS Tissue	products: invalid values ['Signatera GHP']
LOPS-1939	Story	Closed	Gianna Bell-Eunice	Perform Fragmentation	products: invalid values ['Signatera GHP']
LOPS-1937	Story	Closed	Brad Garrett	Start Normalization - Blood	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 2 (17) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2346	Story	Closed	Brad Garrett	WGS Blood Extraction rundata processor	products: invalid values ['Signatera GHP']
LOPS-2307	Task	Closed	Hani Yakan	Create WGS test samples with devtools	products: invalid values ['Signatera GHP']
LOPS-2227	Story	Closed	Brad Garrett	WGS Blood Extraction worklist generator	products: invalid values ['Signatera GHP']
LOPS-2198	Story	Closed	Hani Yakan	Assay Template for WGS Blood	products: invalid values ['Signatera GHP']
LOPS-2195	Story	Closed	Ron Enson	Create WGS blood extraction master data	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 17 (32) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5189	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: Platform	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5188	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WGS	products: invalid values ['Signatera GHP']
LOPS-5187	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WES	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5185	Task	Closed	—	Final automated testing for the LOPS 1.1.0.0 release candidate	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5170	Story	Closed	—	WES/WGS: Access for Pathologist User (Test Only)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5168	Defect	Closed	Klead Fusha	Box list page is missing the WGS actions	products: invalid values ['Signatera GHP']
LOPS-5161	Story	Closed	—	WES/WGS: Access for Histology User (Test Only)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5144	Task	Closed	Matt Smith	Pre-deployment clean-up of the LOPS production configuration	products: invalid values ['Signatera GHP']
LOPS-5136	Defect	Closed	Brad Garrett	Wes On X: Capture QC - Error when sending blood and tissue sample pools to rerun from BE/Histo	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5135	Defect	Closed	Brad Garrett	Runlog header details are not being recorded for some WGS steps	products: invalid values ['Signatera GHP']
LOPS-5132	Defect	Closed	Michael Livingston	Wes On X: Arrays List page - Order and description of Wes Actions menu items is incorrect	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5073	Task	Closed	—	G64 Regression Testing - Dmitry	products: invalid values ['Signatera GHP']
LOPS-5008	Task	Closed	Matt Smith	G64 Launch Build 1 - Production deployment	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5006	Task	Closed	Swati Giri	G64 Launch Build Zero - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-4673	Defect	Closed	Klead Fusha	Align WGS Blood and Tissue Extraction WF with WES version	products: invalid values ['Signatera GHP']
LOPS-4158	Tweak	Closed	Michael Livingston	Standardize G64 test methods, array methods, and array layouts	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 16 (31) (37 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5149	Defect	Closed	Michael Livingston	Fix description for qPCR array layout	products: invalid values ['Signatera GHP']
LOPS-5122	Task	Closed	Klead Fusha	G64 Pre-Launch Build 1 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-5120	Task	Closed	—	Re-merging of LOPS-4126 into the G64 launch branch	products: invalid values ['Signatera GHP']
LOPS-5117	Tweak	Closed	—	WGS: Access for Lab Ops User (Test Only)	products: invalid values ['Signatera GHP']
LOPS-5116	Story	Closed	—	WGS: Access for Extraction User (Test Only)	products: invalid values ['Signatera GHP']
LOPS-5113	Task	Closed	Kevin Detweiler	Request from biodev to retrieve data associated with all E2E scenarios	products: invalid values ['Signatera GHP']
LOPS-5112	Defect	Closed	Klead Fusha	Assay QC page - Complete Review, Array Genealogy, approval/rejection buttons are missing	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5096	Task	Closed	Matt Smith	Merge Hotfix 5 into the G64 launch branch	products: empty
LOPS-5095	Defect	Closed	Michael Livingston	Demo/UAT Support: G64 QC Batch status is dataentered	products: invalid values ['Signatera GHP']
LOPS-5094	Defect	Closed	—	12/11/2024 issues in PSPC testing	products: invalid values ['Signatera GHP']
LOPS-5093	Defect	Closed	Klead Fusha	Unable to create Sequencing Manifest	products: invalid values ['Signatera GHP']
LOPS-5053	Task	Closed	Swati Giri	G64 E2E Build 4 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-5047	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	products: invalid values ['Signatera GHP']
LOPS-5034	Defect	Closed	Klead Fusha	WGS Primer design array should be created with the blood and tissue samples loaded	products: invalid values ['Signatera GHP']
LOPS-5030	Story	Closed	Michael Livingston	Add validation on buttons for tapestation and qpcr QC Review	products: invalid values ['Signatera GHP']
LOPS-5018	Task	Closed	Brad Garrett	G64 E2E Build 3 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-5016	Defect	Closed	Michael Livingston	Typo for Sample Barcode column on BERR page	products: invalid values ['Signatera GHP']
LOPS-5010	Defect	Closed	Klead Fusha	qPCR result upload is too slow	products: invalid values ['Signatera GHP']
LOPS-5001	Story	Closed	Brad Garrett	Update ProcessType used for WGS at Blood Extraction to WES ProcessType to support QS Processing	products: invalid values ['Signatera GHP']
LOPS-4998	Task	Closed	Liubomyr Skorokhod	Execution of the GHP-WGSPIPE-10/11/12/13 G64 E2E scenarios	products: invalid values ['Signatera GHP']
LOPS-4971	Defect	Closed	Brad Garrett	Duplicate incidents created for samples dequeued from library quant	products: invalid values ['Signatera GHP']
LOPS-4969	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into G64	products: invalid values ['Signatera GHP']
LOPS-4967	Defect	Closed	Klead Fusha	Tissue Tube verification workflow blocked	products: invalid values ['Signatera GHP']
LOPS-4966	Defect	Closed	Klead Fusha	Rejecting individual wells not being excluded	products: invalid values ['Signatera GHP']
LOPS-4959	Task	Closed	Matt Smith	Create a release version of the LOPS-G64-E2E branch	products: invalid values ['Signatera GHP']
LOPS-4941	Defect	Closed	Mikhail Terpugov	Failure to push the default average size value	products: invalid values ['Signatera GHP']
LOPS-4935	Defect	Closed	Klead Fusha	Align G64 Extraction Quant specifications/approval types with WES-X	products: invalid values ['Signatera GHP']
LOPS-4840	Story	Closed	Michael Livingston	Median calculation code in Lib Quant needs to handle blank entries	products: invalid values ['Signatera GHP']
LOPS-4765	Story	Closed	Brad Garrett	Test Only - Automatically launch WGS pipeline when sequencing is complete - Unhappy Path	products: invalid values ['Signatera GHP']
LOPS-4699	Defect	Closed	Michael Livingston	LOPS doesn't cancel assay if ARM published kafka event with 'CANCEL' action code	products: invalid values ['Signatera GHP']
LOPS-3921	Story	Closed	Mikhail Terpugov	Review combined Library Quant Results - Re-quant	products: invalid values ['Signatera GHP']
LOPS-3858	Story	Closed	Mikhail Terpugov	Tissue Library QC Review: Action > Fail & Re-Extract	products: invalid values ['Signatera GHP']
LOPS-3857	Story	Closed	Mikhail Terpugov	Blood Library QC Results Review: Action > Fail & Re-Extract	products: invalid values ['Signatera GHP']
LOPS-2281	Story	Closed	—	WGS Assay Cancellation - Test only	products: invalid values ['Signatera GHP']
LOPS-1970	Story	Closed	—	Rework from Assay QC	products: invalid values ['Signatera GHP']
LOPS-1969	Story	Closed	—	(Test only) Support Exception from Assay QC Review	products: invalid values ['Signatera GHP']
LOPS-1967	Story	Closed	—	Retrigger WGS pipeline - Test only	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 15 (30) (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4982	Task	Closed	Liubomyr Skorokhod	Sample creation for G64 E2E testing: Plate 6 for Build 2	products: invalid values ['Signatera GHP']
LOPS-4951	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	products: invalid values ['Signatera GHP']
LOPS-4948	Defect	Closed	—	The DestConcentration value has fewer digits after uploading rundata file	products: invalid values ['Signatera GHP']
LOPS-4942	Task	Closed	Brad Garrett	Workaround for G64 E2E for LOPS-4939	products: invalid values ['Signatera GHP']
LOPS-4931	Defect	Closed	Harris Shapiro	WES E2E workflow can not be completed on g64integration-01 environment	products: invalid values ['Signatera GHP']
LOPS-4928	Defect	Closed	Klead Fusha	[WGS] Tissue Extraction QC Review -> Accept Partial: unexpected behaviour during workflow	products: invalid values ['Signatera GHP']
LOPS-4915	Defect	Closed	Klead Fusha	G64 re-quant config defect: Regression from The Big Merge	products: invalid values ['Signatera GHP']
LOPS-4914	Task	Closed	Klead Fusha	Temporary workaround for a re-quant config defect	products: invalid values ['Signatera GHP']
LOPS-4913	Task	Closed	Brad Garrett	Manual recombination of samples from the two Happy Path sequencing pools	products: invalid values ['Signatera GHP']
LOPS-4911	Task	Closed	Brad Garrett	Update ApprovalType and Limit Values on the DAQ Metrics profiles in E2E & Integration environment	products: invalid values ['Signatera GHP']
LOPS-4908	Defect	Closed	Brad Garrett	LOPS doesn't display metric results in Assay QC page if pipe.info.event contains metrics	products: invalid values ['Signatera GHP']
LOPS-4899	Defect	Closed	Brad Garrett	LOPS marks the assay as 'Completed' with disposition = 'passed' instead of 'Failed' if the pipe info event contains DAQ	products: invalid values ['Signatera GHP']
LOPS-4897	Task	Closed	Harris Shapiro	Missing Base Department for the "admin" user in some G64 environments	products: invalid values ['Signatera GHP']
LOPS-4882	Story	Closed	—	Test Only - Promote Results to Source Array	products: invalid values ['Signatera GHP']
LOPS-4872	Task	Closed	Deon Hughes	Correction of the remaining mis-entered reagent lot information	products: invalid values ['Signatera GHP']
LOPS-4862	Defect	Closed	Default User	Box with empty barcode is not displayed in the box list	products: invalid values ['Signatera GHP']
LOPS-4861	Task	Closed	Klead Fusha	Removal of the old version of the FRAG_MEDIAN metric ID from the current G64 environments	products: invalid values ['Signatera GHP']
LOPS-4860	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed	products: invalid values ['Signatera GHP']
LOPS-4857	Task	Closed	Brad Garrett	Correction of mis-entered reagent lot information	products: invalid values ['Signatera GHP']
LOPS-4849	Story	Closed	Michael Livingston	Remove KIT-000108 from Seq Prep	products: invalid values ['Signatera GHP']
LOPS-4847	Defect	Closed	Brad Garrett	LOPS doesn't consume pipe status event if DAQ /PD job is completed	products: invalid values ['Signatera GHP']
LOPS-4845	Defect	Closed	Klead Fusha	"Failed to process action 'ProcessResultAction'. Reason: Could not find load array config with name WGS qPCR Results in	products: invalid values ['Signatera GHP']
LOPS-4844	Defect	Closed	Michael Livingston	Biomek requires padded well locations at Consolidation	products: invalid values ['Signatera GHP']
LOPS-4824	Task	Closed	Mikhail Terpugov	Add details for the deprecated tags for LOPS-3857 & LOPS-3858	products: invalid values ['Signatera GHP']
LOPS-4805	Defect	Closed	Mikhail Terpugov	[WGS] qPCR Results Review - ReQuant: The Zone Data hasn't updated during uploading the second qPCR Results file	products: invalid values ['Signatera GHP']
LOPS-4797	Task	Closed	Swati Giri	G64 E2E Build 2 - E2E deployment	products: invalid values ['Signatera GHP']
LOPS-4795	Task	Closed	Swati Giri	G64 E2E Build 2 - Demo deployment	products: invalid values ['Signatera GHP']
LOPS-4684	Task	Closed	Alex Kalinichev	Sample creation for G64 E2E testing: Build 2	products: invalid values ['Signatera GHP']
LOPS-4683	Task	Closed	Alex Kalinichev	Sample creation for G64 E2E testing: Build 1	products: invalid values ['Signatera GHP']
LOPS-4572	Story	Closed	Brad Garrett	Add pool metrics for signateraWGSPairRunMetrics metric profile	products: invalid values ['Signatera GHP']
LOPS-3920	Story	Closed	Mikhail Terpugov	Tapestation Results Review - Re-quant	products: invalid values ['Signatera GHP']
LOPS-1965	Story	Closed	Brad Garrett	Test Only - Automatically launch Primer Design pipeline when assay request is received	products: invalid values ['Signatera GHP']
LOPS-1964	Story	Closed	Brad Garrett	Receive Assay QC DAQ and PD Metrics	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 14 (29) (27 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4874	Task	Closed	Klead Fusha	Add the base department to the admin user in the DB in the patch deployment.	products: empty
LOPS-4843	Task	Closed	Klead Fusha	Database correction of NULL data set values	products: invalid values ['Signatera GHP']
LOPS-4842	Task	Closed	Brad Garrett	Cherry picking of critical production fixes for G64 E2E	products: invalid values ['Signatera GHP']
LOPS-4841	Task	Closed	Klead Fusha	Revert the changes from LOPS-4623 for G64 E2E	products: invalid values ['Signatera GHP']
LOPS-4839	Task	Closed	Brad Garrett	Anomalous plate-level sample QC failure at Library QC Review	products: invalid values ['Signatera GHP']
LOPS-4838	Task	Closed	Brad Garrett	Create a branch for G64 E2E	products: invalid values ['Signatera GHP']
LOPS-4836	Task	Closed	—	Deployment issue on develop: "Schema being registered is incompatible with an earlier schema for subject "events.assay-r	products: invalid values ['Signatera GHP']
LOPS-4820	Task	Closed	Mai Ton-Nu	Demo/UAT Support: 11/15/2024 Sample Creation	products: invalid values ['Signatera GHP']
LOPS-4811	Defect	Closed	Klead Fusha	WGS Library Quant - Promote results to source array button	products: invalid values ['Signatera GHP']
LOPS-4796	Task	Closed	Brad Garrett	G64 E2E Build 2 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-4793	Task	Closed	Brad Garrett	Manual remarrying of a set of G64 E2E samples	products: invalid values ['Signatera GHP']
LOPS-4788	Story	Closed	—	Test Only - WGS tissue must have PRO0022275 instead of PRO0014905	products: invalid values ['Signatera GHP']
LOPS-4778	Task	Closed	Kevin Detweiler	G64 E2E: Unable to enter TDNA plate run details	products: invalid values ['Signatera GHP']
LOPS-4769	Task	Closed	Klead Fusha	Refactor the blood extraction retest handlers	products: invalid values ['Signatera GHP']
LOPS-4762	Task	Closed	—	Regressin Run on MR for Launch into develop	products: invalid values ['Signatera GHP']
LOPS-4738	Defect	Closed	Michael Livingston	Test Only: Re-queued blood samples must be included in the WGS blood extraction worklist	products: invalid values ['Signatera GHP']
LOPS-4728	Task	Closed	Brad Garrett	Manual propagation of the fix for LOPS-4698	products: invalid values ['Signatera GHP']
LOPS-4711	Story	Closed	Klead Fusha	The system shall prevent boxes with duplicate barcodes from being created.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4701	Task	Closed	Swati Giri	Additional reagent lots & equipment for G64 E2E	products: invalid values ['Signatera GHP']
LOPS-4698	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed.	products: invalid values ['Signatera CLIA', 'Signatera GHP']
LOPS-4543	Story	Closed	Klead Fusha	Rework scenario from LOPS-1948	products: invalid values ['Signatera GHP']
LOPS-4088	Story	Closed	Michael Livingston	Ensure input(s) are entered for tumor purity field(s) for Macrodissection	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3919	Story	Closed	Mikhail Terpugov	qPCR Results Review - Re-quant	products: invalid values ['Signatera GHP']
LOPS-3856	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for Tissue	products: invalid values ['Signatera GHP']
LOPS-3815	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for blood	products: invalid values ['Signatera GHP']
LOPS-1972	Story	Closed	Klead Fusha	Filler Samples assay templates	products: invalid values ['Signatera GHP']
LOPS-1922	Story	Closed	Brad Garrett	Update Pipeline Launch Request to support GHP Primer Design Assay Code for sending DAQ Job ID	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 13 (28) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4689	Task	Closed	Mai Ton-Nu	Sample creation for G64 E2E testing: Build 1, Single Samples	products: invalid values ['Signatera GHP']
LOPS-4682	Task	Closed	Swati Giri	G64 E2E Build 1 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-4681	Task	Closed	Swati Giri	G64 E2E Build 1 - Demo deployment	products: invalid values ['Signatera GHP']
LOPS-4678	Task	Closed	Catalin Parvana	G64 AV Testing - Generate LOPS Assay Disposition Messages	products: invalid values ['Signatera GHP']
LOPS-4655	Task	Closed	Swati Giri	Additional instruments to create in assorted G64 environments	products: invalid values ['Signatera GHP']
LOPS-4625	Defect	Closed	Klead Fusha	Select Tissue Samples missing default values	products: invalid values ['Signatera GHP']
LOPS-4605	Task	Closed	Swati Giri	Create Test sample set in the GHP E2E Environment	products: invalid values ['Signatera GHP']
LOPS-4603	Task	Closed	Swati Giri	Create Consumables for GHP E2E	products: invalid values ['Signatera GHP']
LOPS-4602	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	products: invalid values ['Signatera GHP']
LOPS-4594	Defect	Closed	Brad Garrett	WGS - Unable to complete the LysisAndDecrosslinking step	products: invalid values ['Signatera GHP']
LOPS-4565	Task	Closed	Swati Giri	G64 E2E Build Zero - E2E deployment & Dry Run Sample Creation	products: invalid values ['Signatera GHP']
LOPS-4546	Story	Closed	Michael Livingston	Record the equipment ID for Tapestation and qPCR	products: invalid values ['Signatera GHP']
LOPS-4241	Tweak	Closed	Michael Livingston	Fix the description for Tissue tape station array method	products: invalid values ['Signatera GHP']
LOPS-4184	Task	Closed	Swati Giri	G64 E2E Build 1 - E2E deployment	products: invalid values ['Signatera GHP']
LOPS-4183	Task	Closed	Swati Giri	G64 E2E Build Zero - Demo deployment	products: invalid values ['Signatera GHP']
LOPS-4182	Task	Closed	Swati Giri	G64 E2E Build Zero - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-4155	Task	Closed	Mikhail Terpugov	Replace generic WGS parameter lists with step-specific names	products: invalid values ['Signatera GHP']
LOPS-1963	Story	Closed	Klead Fusha	Automatically launch WGS pipeline when sequencing is complete	products: invalid values ['Signatera GHP']
LOPS-1953	Story	Closed	Klead Fusha	Finish Sequencing	products: invalid values ['Signatera GHP']
LOPS-1952	Story	Closed	Michael Livingston	Start Sequencing	products: invalid values ['Signatera GHP']
LOPS-1951	Story	Closed	Brad Garrett	Sequencing Prep	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 12 (27) (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4587	Defect	Closed	Klead Fusha	HIstopathology. Pool samples error	products: invalid values ['Signatera GHP']
LOPS-4177	Defect	Closed	Brad Garrett	Tissue Tube Verification: An error related to samples appeared.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4168	Task	Closed	Klead Fusha	Apply WGS Pool Prep automatically when processing Consolidation	products: invalid values ['Signatera GHP']
LOPS-4156	Defect	Closed	Brad Garrett	Tissue Tube to Rack: Unable to Complete task due to required string "srctestmethod" is null or empty	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4138	Task	Closed	Klead Fusha	Consolidation and Pool Prep updates for happy path	products: invalid values ['Signatera GHP']
LOPS-4136	Defect	Closed	Brad Garrett	Tissue Deparaffinization .Error : Required String 'srctestmethod' is null or empty.	products: invalid values ['Signatera GHP']
LOPS-4113	Story	Closed	Mikhail Terpugov	Record WGS Blood Extraction Run Details	products: invalid values ['Signatera GHP']
LOPS-4093	Defect	Closed	Brad Garrett	Restoration of G64-specific configuration deleted by the WES branch merge	products: invalid values ['Signatera GHP']
LOPS-4024	Defect	Closed	Klead Fusha	Absent KAPALibQuant - NAT-810164 validation	products: invalid values ['Signatera GHP']
LOPS-4005	Task	Closed	Brad Garrett	Migrate NovaSeq X 25B Reagent Data from LV1.0 to LOPS GHP E2E environment for testing.	products: invalid values ['Signatera GHP']
LOPS-3959	Task	Closed	Mikhail Terpugov	WGS Library Quant QC Review: Accepting and pushing results	products: invalid values ['Signatera GHP']
LOPS-3906	Story	Closed	—	qPCR Results Review	products: invalid values ['Signatera GHP']
LOPS-3860	Story	Closed	Mikhail Terpugov	Tapestation Results Review	products: invalid values ['Signatera GHP']
LOPS-3855	Story	Closed	Michael Livingston	Blood Extraction QC Results Review: Action > Fail & Re-Extract	products: invalid values ['Signatera GHP']
LOPS-3738	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	products: invalid values ['Signatera GHP']
LOPS-3683	Story	Closed	—	Start qPCR Plate Setup - Blood, Test only	products: invalid values ['Signatera GHP']
LOPS-2902	Story	Closed	Brad Garrett	Pool Prep	products: invalid values ['Signatera GHP']
LOPS-2521	Story	Closed	Klead Fusha	Process qPCR file for Library Quant	products: invalid values ['Signatera GHP']
LOPS-1949	Story	Closed	Klead Fusha	Finish Consolidation	products: invalid values ['Signatera GHP']
LOPS-1948	Story	Closed	Klead Fusha	Start Consolidation and Master Data	products: invalid values ['Signatera GHP']
LOPS-1947	Story	Closed	Klead Fusha	Review combined Library Quant Results	products: invalid values ['Signatera GHP']
LOPS-1919	Story	Closed	Michael Livingston	Sequencing Master Data for WGS DAQ	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 11 (26) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4028	Task	Closed	Ron Enson	Demo/UAT Support: G64 Sample Creation	products: invalid values ['Signatera GHP']
LOPS-3985	Story	Closed	Klead Fusha	Array Status Rule after applying new Array Method	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3958	Task	Closed	Klead Fusha	WGS Library Quant QC Review: Master data, updates to current flow, new test methods, regrouping	products: invalid values ['Signatera GHP']
LOPS-3934	Defect	Verified	Gianna Bell-Eunice	Blood Fragmentation error: required workItem 'WGS Fragmentation' version '1' available and applied	products: invalid values ['Signatera GHP']
LOPS-3905	Task	Closed	Gianna Bell-Eunice	Creation of additional G64 demo samples	products: invalid values ['Signatera GHP']
LOPS-3890	Story	Closed	Michael Livingston	Validate: Cannot Re-Quant Plate after Extraction QC Review is Completed	products: invalid values ['Signatera GHP']
LOPS-3878	Defect	Closed	Michael Livingston	Active Array Method Description missing for WGS Tissue Tapestation v1	products: invalid values ['Signatera GHP']
LOPS-3867	Defect	Verified	Michael Livingston	Wrong order in Upload WGS Rundata dropdown	products: invalid values ['Signatera GHP']
LOPS-3830	Defect	Verified	Hani Yakan	WGS G64 sample creation script error	products: invalid values ['Signatera GHP']
LOPS-3821	Story	Closed	Michael Livingston	Support "Accept Partial" Action for Blood Extraction DNA Plate at 'Extraction QC	products: invalid values ['Signatera GHP']
LOPS-3734	Story	Closed	Michael Livingston	Extraction QC Review > Approve Plate: "Accept Partial" and Log Exception for Failed Tissue Sample	products: invalid values ['Signatera GHP']
LOPS-3653	Story	Closed	—	Re-verification of the Blood Extraction workflow - Test-Only	products: invalid values ['Signatera GHP']
LOPS-3614	Story	Closed	Michael Livingston	Tissue Extraction QC Results Review: Action > Fail & Re-Extract	products: invalid values ['Signatera GHP']
LOPS-2543	Story	Closed	Mikhail Terpugov	Finish Tapestation Plate Setup	products: invalid values ['Signatera GHP']
LOPS-2522	Story	Closed	Mikhail Terpugov	Process Tapestation file for Library Quant	products: invalid values ['Signatera GHP']
LOPS-1945	Story	Closed	Klead Fusha	Finish qPCR Plate Setup	products: invalid values ['Signatera GHP']

G64onLOPS Sprint 10 (25) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3872	Defect	Closed	Gianna Bell-Eunice	Fragmentation throws 'do not have the required workItem' error	products: invalid values ['Signatera GHP']
LOPS-3827	Defect	Closed	Mikhail Terpugov	AssayStatus and Disposition are inaccurate	products: invalid values ['Signatera GHP']
LOPS-3799	Defect	Closed	Ron Enson	References to WES in Quant 384WellPlate Blood	products: invalid values ['Signatera GHP']
LOPS-3792	Defect	Closed	Ron Enson	wrong Run Detail Type(s) - WesBloodExtractionHeaders	products: invalid values ['Signatera GHP']
LOPS-3791	Defect	Closed	Ron Enson	Absent Array Method Description after Blood extraction quantification	products: invalid values ['Signatera GHP']
LOPS-3682	Tweak	Closed	Brad Garrett	Finish Library Amp - Tissue	products: invalid values ['Signatera GHP']
LOPS-3680	Tweak	Closed	Brad Garrett	Start Library Amp - Tissue	products: invalid values ['Signatera GHP']
LOPS-3654	Story	Closed	—	Re-verification of the Pre-Amp workflow - Test-Only	products: invalid values ['Signatera GHP']
LOPS-2839	Story	Closed	Brad Garrett	8-Tissue Re-Rack	products: invalid values ['Signatera GHP']

LOPS Sprint 29 (64 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7163	Task	Closed	Brandon Culver	Add RSET Index Rebuild Job to sgNIPT LOPS Prod	products: empty
LOPS-7154	Task	Closed	Brandon Culver	Create RW and RO Database Users in sgNIPT LOPS Prod	products: empty
LOPS-7141	Task	Opened	Matt Smith	CLONE - Create RO Database User in LOPS Prod for Ariel	products: empty
LOPS-4977	Tweak	Verified	Lev Evstratov	"QC Batches" tab is not present at "View Sample" page	products: invalid values ['Signatera WES']
LOPS-4976	Defect	Closed	Lev Evstratov	"QC Batches" tab is not present at "Edit Sample" page	products: invalid values ['Signatera WES']
LOPS-4975	Tweak	Verified	Lev Evstratov	"Arrays" tab is not present at "View Sample" page	products: invalid values ['Signatera WES']
LOPS-4804	Task	Closed	—	Corrections needed for reagentclass for WES controls and primers in Production	products: empty
LOPS-4794	Task	Closed	—	ReagentSync: NPE in the connector filter	products: invalid values ['Other']
LOPS-4792	Task	Opened	—	QC Batch List Page: Remove 'Racks Ready for Tube Verification' Filter in Production	products: invalid values ['Signatera WES']
LOPS-4779	Task	Closed	Alex Pakhunov	Add HZN - San Carlos security department for sync with LV1	products: invalid values ['Signatera WES']
LOPS-4776	Tweak	Closed	Alex Pakhunov	Add reagent sync mapping for reagent security departments	products: invalid values ['Signatera WES']
LOPS-4772	Task	Closed	—	Run platform regression testing for M3 build	products: invalid values ['Signatera WES']
LOPS-4763	Task	Closed	Deon Hughes	Create user jachen in LOPS PROD	products: empty
LOPS-4761	Story	Closed	Kevin Detweiler	Restrict the ability for the Instrument RO role to Add or Edit Instrument Notes	products: invalid values ['Other']
LOPS-4760	Story	Closed	Kevin Detweiler	Update Hyperlinks on Tramlines	products: invalid values ['Other']
LOPS-4755	Task	Closed	Matt Smith	Create RO Database User in LOPS Prod for Ariel	products: empty
LOPS-4741	Defect	Closed	Vasiliy Kumaev	Unable to Process Pipeline Done Message for DAQ due to Errors with Control UUIDs	products: invalid values ['Signatera WES']
LOPS-4732	Task	Closed	Vasilii Sevriugin	Correct AWS Keys in Environment Variables	products: empty
LOPS-4729	Task	Closed	—	G64 - Updates for PD_ASSAY_APPROVAL	products: invalid values ['Signatera WES']
LOPS-4725	Defect	Closed	Vasiliy Kumaev	Button "Rework Blood from Extraction" produces error: "An unexpected error occurred Caused by Failed to process action '	products: invalid values ['Signatera WES']
LOPS-4712	Task	Closed	Alex Pakhunov	AWS S3 G64 E2E Upload	products: empty
LOPS-4630	Task	Closed	—	Run WES regression for launch	products: invalid values ['Signatera WES']
LOPS-4627	Story	Verified	Mikhail Makarin	Filter out ARM messages for non-LOPS assay codes	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4610	Task	Closed	—	Create a branch for sgNIPT phase 2	products: empty
LOPS-4607	Defect	Closed	Brandon Culver	gDNA LR-PCR array methods test results cannot be promoted.	products: invalid values ['sgNIPT']
LOPS-4597	Task	Closed	Ariel Jirau	Update strict-max-bean-instance-pool size from 50 to 200	products: empty
LOPS-4596	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Error trying to push samples and fillers in the Deparaffinization step	products: invalid values ['Signatera WES']
LOPS-4585	Story	Closed	Kevin Detweiler	Updates to Existing Jobtypes based on needed changes for ReadOnly jobtype	products: invalid values ['Other']
LOPS-4583	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Lib Quant QC Assay for Pre-Shakedown Plate (101924B-WLP2) was "Reviewed" without E-sign	products: invalid values ['Signatera WES']
LOPS-4579	Story	Closed	Kevin Detweiler	Additional Role configuration on Incidents related pages	products: invalid values ['Other']
LOPS-4578	Story	Closed	Kevin Detweiler	Additional Role configuration on the Consumables related pages	products: invalid values ['Other']
LOPS-4575	Story	Closed	Kevin Detweiler	Additional Role Configuration for Storage related pages	products: invalid values ['Other']
LOPS-4574	Story	Closed	Kevin Detweiler	Additional Role configuration for Test related Pages	products: invalid values ['Other']
LOPS-4571	Story	Closed	Kevin Detweiler	Role Configuration for Request related pages	products: invalid values ['Other']
LOPS-4569	Story	Verified	Lev Evstratov	Remove OOB field 'quantity' that is no longer in use on workitemchildsampleplan element on the test method maint page	products: invalid values ['sgNIPT']
LOPS-4558	Task	Closed	Meghana Joshi	Refresh Post Launch Branch Into Develop and Correct Missing WES Functionality	products: invalid values ['Signatera GHP']
LOPS-4545	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite original securitydepartment	products: invalid values ['Other']
LOPS-4538	Task	Closed	Vasiliy Kumaev	Additional hard-coded reference to the "LIMS" schema	products: invalid values ['Signatera WES']
LOPS-4236	Task	Closed	Mikhail Makarin	SamRep Post-Launch: Remove accn 1.0 event consumption logic	products: empty
LOPS-4194	Story	Closed	Kevin Detweiler	Additional Role configuration on AQC Batches related pages	products: invalid values ['Other']
LOPS-4178	Task	Closed	Ariel Jirau	Configure VPC endpoint connectivity from lops-dev default vpc to natera nonprod kafka VPC	products: empty
LOPS-4175	Tweak	Closed	Isaac Vargas	Reagent Type creation for new reagents since data migration	products: invalid values ['Signatera WES']
LOPS-4126	Tweak	Closed	Alex Pakhunov	Automatically set correct SamRep environment url during non-prod deployments	products: invalid values ['Other']
LOPS-4103	Task	Closed	Matt Smith	Add RSET Index Rebuild Job to LOPS Prod	products: empty
LOPS-4100	Story	Verified	Vasiliy Kumaev	Provide Natera barcode on Load Array page and update scan to allow Natera Barcode	products: invalid values ['sgNIPT']
LOPS-4090	Task	Closed	Leonid Garin	Run regression test to verify k8s is working correctly. Dev part with LOPS	products: empty
LOPS-4089	Task	Closed	—	Run regression test to verify k8s is working correctly with LOPS. SQE part	products: empty
LOPS-4014	Story	Verified	Ize Imai	Remove the logic for exception sourceSystem and status in the Assay Complete message	products: invalid values ['sgNIPT']
LOPS-4008	Story	Closed	Ron Enson	Reagents team needs ability to see the data entry button and enter results on samples	products: invalid values ['Other']
LOPS-3988	Task	Closed	Hani Yakan	Migrate the 'Grid with Params for Reagents IQC' Data Entry view from LV1.0 to LOPS	products: invalid values ['Other']
LOPS-3907	Defect	Verified	Ize Imai	The values under Exception block under events.labops.workflow.status.v1 are not correct.	products: invalid values ['sgNIPT']
LOPS-3895	Story	Closed	Vasiliy Kumaev	Transaction Reprocessing Improvements	products: invalid values ['Signatera WES']
LOPS-3874	Story	Verified	Lev Evstratov	Update QCBatchItemLookup to have ability to scan and display Natera barcodes	products: invalid values ['sgNIPT']
LOPS-3781	Story	Verified	Lev Evstratov	Expand visible width for Transfer Method ID in LOPS UI	products: invalid values ['sgNIPT']
LOPS-3762	Story	Verified	Lev Evstratov	ARM transaction is Not Processed if If the Exception block contains an Exception Code that is not configured in LOPS	products: invalid values ['sgNIPT']
LOPS-3756	Task	Closed	Valeria Vargas	Update the JBoss memory allocation for the PSPC and E2E environments	products: invalid values ['Signatera WES']
LOPS-3584	Task	Closed	Leonid Garin	Create API user for the RestAPI integrations with pipeline	products: empty
LOPS-3229	Task	Closed	—	Create EPS Runbook for LOPS	products: empty
LOPS-3227	Task	Closed	—	Disable Accessioning Message, Sample Management Event Message, and Deprecate the Jama Documentation	products: invalid values ['Other']
LOPS-2996	Story	Verified	Ize Imai	Container type is unable to be associated with sample type for child sample plan	products: invalid values ['sgNIPT']
LOPS-2411	Story	Verified	Vasiliy Kumaev	The system shall have the ability to automatically create pooled samples after performing a required test	products: invalid values ['sgNIPT']
LOPS-2296	Task	Closed	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Task	products: invalid values ['sgNIPT']
LOPS-2295	Task	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Task	products: invalid values ['sgNIPT']
LOPS-1983	Story	Closed	Kevin Detweiler	Read Only Job Type	products: invalid values ['Signatera WES']

LOPS Sprint 32 (32 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7162	Task	Opened	—	Provide SELECT Access to LabVantage Views for RO Database Role	products: empty
LOPS-5249	Task	Closed	Deon Hughes	Update job type for Biodev and DataScience users to ReadOnly	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5228	Task	Closed	Vasilii Sevriugin	Update Web and Intf Image Tags for M4 Release	products: empty
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5175	Task	Closed	Ize Imai	Knowledge share for dispose and rerun microdels	products: empty
LOPS-5172	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2)	products: invalid values ['Other']
LOPS-5082	Task	Closed	Meghana Joshi	Add NtrClearCacheAction to LOPS	products: empty
LOPS-5081	Defect	Closed	—	Assay QC Failing	products: invalid values ['Signatera WES']
LOPS-5077	Task	Closed	—	G64 Regression Testing - Serhii	products: invalid values ['Signatera GHP']
LOPS-5071	Task	Closed	—	G64 Regression Testing - Shweta	products: invalid values ['Signatera GHP']
LOPS-5070	Task	Closed	—	G64 Regression Testing - Mike N.	products: invalid values ['Signatera GHP']
LOPS-5051	Task	Closed	Ariel Jirau	Add Kubernetes workloads annotations to enable datadog logging	products: empty
LOPS-4981	Defect	Closed	Meghana Joshi	Exceptions and Incidents Elements on the Assay view page are hidden from Lab Ops Operator job type	products: invalid values ['Signatera WES']
LOPS-4901	Story	Verified	Mikhail Makarin	Illumina NGS - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete messa	products: invalid values ['sgNIPT']
LOPS-4900	Task	Closed	—	Register v2 of Sequencing Run Complete message	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4884	Task	Closed	Vasilii Sevriugin	Set Kafka Schema Validation Job to automatic	products: empty
LOPS-4881	Task	Closed	Lev Evstratov	Spike - Investigate sending matrix barcode through Reagent validation API	products: invalid values ['sgNIPT']
LOPS-4846	Task	Closed	Leonid Garin	Spike: Optimize enterAndReleaseDataSets in the Sgnipt LRPCR/HybridCapture pipeline	products: invalid values ['sgNIPT']
LOPS-4835	Task	Closed	Leonid Garin	Optimize control data request for Pipeline Launch Request	products: invalid values ['sgNIPT']
LOPS-4834	Task	Closed	Leonid Garin	Optimize sample data request for Pipeline Launch Request	products: invalid values ['sgNIPT']
LOPS-4808	Story	Verified	Alex Pakhunov	Update logic for retriggering Pipeline Launch Request	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-4787	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (one topic)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4754	Task	Closed	Meghana Joshi	Provide SELECT Access to LabVantage Views for RO Database Role	products: empty
LOPS-4753	Task	Closed	Leonid Garin	Update LOPS UI colors for Non-Prod	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4708	Story	Verified	Vadim Gusev	Implement request conversion logic for LRPCR requests	products: invalid values ['sgNIPT']
LOPS-4702	Story	Verified	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Continue	products: invalid values ['sgNIPT']
LOPS-4169	Story	Verified	Lev Evstratov	Support Hybrid Capture (ASSAY-00043) Assay Request Messages with sequencingSampleReference	products: invalid values ['sgNIPT']
LOPS-3751	Story	Verified	Ize Imai	Support Assay Template specificity in Exception Logging	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-3392	Story	Verified	Lev Evstratov	Display Natera barcode in QC Batch creation page	products: invalid values ['sgNIPT']
LOPS-2309	Task	Closed	Ize Imai	Investigate if system can handle Assay Request Messages where there are a mix of SELECT, RETAIN, and ARCHIVE samples	products: invalid values ['sgNIPT']
LOPS-1551	Story	Verified	Lev Evstratov	NGS - Sequencing Run Complete Processing Code	products: invalid values ['sgNIPT']
LOPS-1542	Story	Verified	Leonid Garin	PacBio LR-PCR - Sequencing Run Complete Processing Code	products: invalid values ['sgNIPT']

LOPS Sprint 25 (61 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7161	Sub-task	Closed	Brandon Culver	Check/Fix Load Balancer and Domain Issues	products: empty
LOPS-7160	Sub-task	Closed	Matt Smith	Update Web Image Tag in Master	products: empty
LOPS-7159	Sub-task	Closed	Brandon Culver	Deploy Base LOPS Web Stack to a local instance	products: empty
LOPS-7158	Task	Closed	Brandon Culver	Install Base LV OOTB Database for sgNIPT LOPS Production	products: invalid values ['sgNIPT']
LOPS-7157	Task	Closed	Brandon Culver	Execute SQL and Configs Needed for LogMiner and Debezium	products: invalid values ['sgNIPT']
LOPS-7156	Task	Closed	Brandon Culver	Configure LOPS LV fileoutdir	products: empty
LOPS-7147	Task	Ready for Development	—	Apply Missing Oracle Minor Version Fixes	products: empty
LOPS-7143	Task	Opened	Matt Smith	CLONE - Create New RO DB Role in Prod Database and RO Accounts for LOPS Team	products: empty
LOPS-7134	Task	Opened	Matt Smith	CLONE - Apply Missing Oracle Minor Version Fixes	products: empty
LOPS-3922	Task	Closed	Klead Fusha	Prod / e2e Support	products: invalid values ['Signatera CLIA']
LOPS-3880	Task	Closed	Matt Smith	Deploy Verified WesX E2E Branch to Production	products: empty
LOPS-3871	Task	Closed	Matt Smith	Create New RO DB Role in Prod Database and RO Accounts for LOPS Team	products: empty
LOPS-3869	Task	Closed	Matt Smith	Execute SQL and Configs Needed for LogMiner and Debezium	products: empty
LOPS-3851	Sub-task	Closed	Matt Smith	Fix Load Balancer and Domain Issues	products: empty
LOPS-3825	Story	Closed	Ron Enson	Update SOP ID and Description for Histopathology	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3820	Sub-task	Closed	Matt Smith	Update Web Image Tag in Master	products: empty
LOPS-3818	Sub-task	Closed	Matt Smith	Deploy Base LOPS Web Stack to Rancher Prod	products: empty
LOPS-3807	Story	Closed	Vasiliy Kumaev	Display sample barcodes for PD runs in Plates & Gels	products: invalid values ['Signatera WES']
LOPS-3803	Task	Closed	Ize Imai	Knowledge share reagent lot generation for E2E environment	products: empty
LOPS-3776	Task	Closed	Jose Valdivieso	Update LV TransProcessor Task to process Exclusively	products: empty
LOPS-3771	Task	Closed	Matt Smith	Update Kafka Encryption Settings to Support DevOps Change	products: empty
LOPS-3768	Task	Closed	Matt Smith	Apply Missing Oracle Minor Version Fixes	products: empty
LOPS-3767	Task	Closed	Matt Smith	Install Base LV OOTB Database for LOPS Production	products: invalid values ['Signatera WES']
LOPS-3765	Task	Closed	—	Validate the sample query provided to retrieve the starttime for histopathology steps	products: invalid values ['Signatera WES']
LOPS-3763	Task	Closed	—	Validate the sample query provided to retrieve createdt	products: invalid values ['Signatera WES']
LOPS-3740	Defect	Closed	Mikhail Makarin	Wes On X - Subsequent Test Methods are not being assigned to canceled Assay samples which blocks wf	products: invalid values ['Signatera WES']
LOPS-3715	Task	Closed	—	Configure Reagent sync in e2e env with RDS and MSK for sanity testing	products: invalid values ['Signatera WES']
LOPS-3701	Task	Closed	Hani Yakan	Finish Implementing PrimerMapLayoutSDC DTO and Util Classes	products: empty
LOPS-3694	Task	Closed	Ize Imai	Move instrument file from lv_Exported to patch_init	products: empty
LOPS-3691	Story	Closed	Lev Evstratov	Updated security department when storing samples	products: invalid values ['Signatera WES']
LOPS-3684	Story	Closed	Lev Evstratov	Histopathology Lab Incidents - UI updates	products: invalid values ['Signatera WES']
LOPS-3675	Story	Closed	Vasiliy Kumaev	Incidents - Remove Approval Step for Incidents Created Without an Approval Workflow	products: invalid values ['Signatera WES']
LOPS-3642	Task	Closed	Swati Giri	LOPS 1.0.0.0 RC 4 deployment - E2E environment	products: invalid values ['Signatera WES']
LOPS-3596	Story	Closed	Valeria Vargas	Primer Design - Add sample information to the Primer Design Assay QC UI and Reports	products: invalid values ['Signatera WES']
LOPS-3545	Task	Closed	Valeria Vargas	Create Dedicated Intf LOPS User for LV Processing	products: invalid values ['Signatera WES']
LOPS-3536	Defect	Closed	Gianna Bell-Eunice	Сonverting units of measurement issue in the reagents Master Data.	products: invalid values ['Other']
LOPS-3511	Story	Verified	Lev Evstratov	SPIKE - Auto-approve Datasets on reagent qualification when all results are passing.	products: invalid values ['Other']
LOPS-3499	Defect	Closed	Ron Enson	The "Instrument Import" button does not work in the Instrument List from the LIMS Menu	products: invalid values ['Signatera WES']
LOPS-3495	Defect	Verified	Meghana Joshi	Update RackToPlate and Tissue DNA Extraction Processing to enter results for the Tissue Control and complete the dataset	products: invalid values ['Signatera WES']
LOPS-3483	Tweak	Closed	Leonid Garin	Update sample package to include sdiworkitemid	products: invalid values ['Signatera WES']
LOPS-3481	Tweak	Closed	Leonid Garin	Create array_result package	products: invalid values ['Signatera WES']
LOPS-3480	Tweak	Closed	Leonid Garin	Update the sample_result package to add result data from sdidataitem	products: invalid values ['Signatera WES']
LOPS-3478	Task	Closed	Mai Ton-Nu	Consumable class assignment in LV1.0	products: invalid values ['Signatera WES']
LOPS-3476	Tweak	Closed	—	Create a method for assigning approval type to all consumables	products: invalid values ['Signatera WES']
LOPS-3450	Story	Closed	Alex Pakhunov	Add Assay QC package for DataMesh Package	products: invalid values ['Signatera WES']
LOPS-3376	Story	Verified	Ize Imai	Handle Short TNP Scenario where action.code = 'CANCEL' (and upversion to v1.18)	products: invalid values ['Other']
LOPS-3342	Story	Verified	Ize Imai	Implement changes needed to redesign/refactor worklist generators/runlog parsers for sgNIPT	products: invalid values ['sgNIPT']
LOPS-3304	Story	Closed	Vladimir Piyanov	Handling assay request processing failures	products: invalid values ['Other']
LOPS-3226	Story	Closed	Vladimir Piyanov	Retrieve sample information from SamRep REST endpoint when Assay Request is consumed and persist sample info to LOPS DB	products: invalid values ['Other']
LOPS-3224	Story	Closed	Vladimir Piyanov	Persist request info from SamRep	products: invalid values ['Other']
LOPS-2637	Story	Verified	Vasiliy Kumaev	Reagent Validation API	products: invalid values ['Other']
LOPS-2531	Story	Verified	Alex Pakhunov	Data Mesh - Implement Assay Information Package. Test only	products: invalid values ['Other']
LOPS-2479	Story	Closed	Mikhail Makarin	The system shall have the ability to list all derivative samples associated to the Parent Barcode	products: invalid values ['Signatera WES']
LOPS-2289	Defect	Closed	Vasiliy Kumaev	ToDoList‎ is not sorted	products: invalid values ['Other']
LOPS-2210	Defect	Closed	Valeria Vargas	Metric names are not sorted	products: invalid values ['Other']
LOPS-2209	Tweak	Closed	Valeria Vargas	Metric name doesn't fit within the "Metric" column width	products: invalid values ['Other']
LOPS-1556	Task	Closed	Ron Enson	Correct typos in "Fail Assay" error message	products: invalid values ['Signatera WES']
LOPS-1384	Story	Closed	Alex Pakhunov	Data Mesh - Create a new service infrastructure and Sample Information Package	products: invalid values ['Other']
LOPS-1383	Story	Closed	Leonid Garin	Data Mesh - Equipment Package	products: invalid values ['Other']
LOPS-1368	Tweak	Closed	—	Create a method for migrating Reagents lot data from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-464	Task	Closed	Hani Yakan	Finish Implementing PrimerMapSDC DTO and Util Classes	products: empty

LOPS Sprint 31 (35 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7155	Task	Closed	—	Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in sgNIPT LOPS Prod	products: invalid values ['sgNIPT']
LOPS-7142	Task	Opened	Matt Smith	CLONE - Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in LOPS Prod	products: empty
LOPS-5097	Task	Closed	Meghana Joshi	Create a new version of the M6 branch	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5078	Task	Closed	—	G64 Regression Testing - Nikolai	products: invalid values ['Signatera GHP']
LOPS-5074	Task	Closed	—	G64 Regression Testing - Oksana	products: invalid values ['Signatera GHP']
LOPS-5069	Task	Closed	—	G64 Regression Testing - Rufat	products: invalid values ['Signatera GHP']
LOPS-5064	Task	Closed	Ariel Jirau	Investigate and fix issue with S3 bucket for Snowflake	products: invalid values ['Signatera WES']
LOPS-5031	Defect	Closed	Ize Imai	Sample - Manage - View/Edit Sample - Data Sets - "QC Batch ID" column should be sorted from most recent (top) to oldest	products: invalid values ['Signatera WES']
LOPS-5015	Story	Verified	Vasiliy Kumaev	cfDNA Library Prep Worklist Policy Configuration	products: invalid values ['sgNIPT']
LOPS-5004	Task	Closed	Alex Pakhunov	Bad image error in Kubernetes through the deploying Reagent Sync	products: invalid values ['Signatera WES']
LOPS-4993	Defect	Closed	Mikhail Makarin	DAQ Sequence Manifest is not using the latest Tumor Purity value.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4992	Defect	Closed	Lev Evstratov	Primer design sequencing manifest is not generated	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4984	Task	Closed	—	GHP E2E Run1: Missing 21 LOPS_ASSAY_IDs in ASSAY_QC	products: invalid values ['Signatera GHP']
LOPS-4947	Task	Closed	—	Run platform regression for M4	products: empty
LOPS-4930	Task	Closed	—	GHP E2E Run 1: SOURCE_WORKITEM_ID is the same for Ext and LibPrep	products: invalid values ['Signatera GHP']
LOPS-4912	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into LOPS-G64-E2E	products: invalid values ['Signatera GHP']
LOPS-4892	Task	Closed	Alex Pakhunov	2 different control quants for 2376-TDNA and PSrework-WLP2	products: invalid values ['Signatera WES']
LOPS-4891	Task	Closed	—	Incorrect Resultcode for Tissue Pre-SD and SD Samples	products: invalid values ['Signatera WES']
LOPS-4888	Task	Closed	Kevin Detweiler	G64 - Investigate how to link the 3 Sequencing Runs	products: invalid values ['Signatera GHP']
LOPS-4822	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into Develop	products: invalid values ['Signatera GHP']
LOPS-4703	Tweak	Verified	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue	products: invalid values ['sgNIPT']
LOPS-4672	Task	Closed	Mikhail Makarin	Support LV1 G64 user e2e testing during morning hours	products: empty
LOPS-4623	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing (part 2)	products: invalid values ['Horizon X']
LOPS-4544	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite storage unit with null value	products: invalid values ['Other']
LOPS-4105	Story	Verified	Vasilii Sevriugin	Record Pipeline Job Status from Pipeline Launch API Response	products: invalid values ['sgNIPT']
LOPS-4104	Task	Closed	Matt Smith	Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in LOPS Prod	products: empty
LOPS-4037	Task	Closed	Vadim Gusev	Add module to receive results of pipelines via pipeline-result message (links only format)	products: invalid values ['sgNIPT']
LOPS-4003	Task	Closed	—	G64 - Sample Disposition Status	products: invalid values ['Signatera WES']
LOPS-3967	Task	Closed	Stanislav Markus	Review Kubernetes Migration Code Provided by DevOps	products: empty
LOPS-3823	Story	Verified	Alex Pakhunov	Array and QC Batch information displayed on Sample Maint and Manage Test list pages	products: invalid values ['sgNIPT']
LOPS-3784	Story	Verified	Ize Imai	Display only first Sample Barcode in Sample Barcode column on QC Batch list page	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-3534	Story	Verified	Vasiliy Kumaev	Create API endpoint for RIR	products: invalid values ['sgNIPT']
LOPS-3533	Story	Verified	Vasiliy Kumaev	Provide RIR with file paths and other info	products: invalid values ['sgNIPT']
LOPS-2680	Task	Closed	Vadim Gusev	Pre-Requisite: sgNIPT alg sequence manifest contract is defined in swaggerhub	products: empty
LOPS-2528	Story	Verified	Vasiliy Kumaev	Build Worklist Generation Policy and Processor Framework	products: invalid values ['sgNIPT']

LOPS Sprint 26 (57 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7153	Task	Closed	Brandon Culver	Execute Post-Install SQL Scripts for DB Setup and Configs	products: empty
LOPS-7151	Sub-task	Opened	—	Remove DB Schema Name From Intf Setup SQL Script	products: invalid values ['sgNIPT']
LOPS-7150	Task	Closed	—	Create new Intf DB User and Set Permissions in LV Prod	products: invalid values ['sgNIPT']
LOPS-7140	Task	Opened	Matt Smith	CLONE - Execute Post-Install SQL Scripts for DB Setup and Configs	products: empty
LOPS-7138	Sub-task	Opened	Matt Smith	CLONE - Remove DB Schema Name From Intf Setup SQL Script	products: empty
LOPS-7137	Task	Opened	Matt Smith	CLONE - Create new Intf DB User and Set Permissions in LV Prod	products: empty
LOPS-4078	Sub-task	Closed	Matt Smith	Remove DB Schema Name From Intf Setup SQL Script	products: empty
LOPS-4034	Task	Closed	Ariel Jirau	Test Running SQE Automation Script in LV Local	products: empty
LOPS-4021	Task	Closed	Leonid Garin	Add User Created Date in LOPS.USERS data product	products: invalid values ['Signatera WES']
LOPS-4011	Task	Closed	—	ReagentSync: configure prod env	products: empty
LOPS-4010	Task	Closed	Alex Pakhunov	Reagent Sync: enable connectors in production	products: invalid values ['Signatera WES']
LOPS-4009	Tweak	Closed	Alex Pakhunov	Reagent Sync: initial sync from LV1.0 to LOPS should only sync active reagents	products: invalid values ['Signatera WES']
LOPS-3987	Task	Closed	—	2 different EXT quants for the same casefile and TDNA plate	products: invalid values ['Signatera WES']
LOPS-3970	Task	Closed	Leonid Garin	Datamesh Production S3 bucket changes	products: invalid values ['Signatera WES']
LOPS-3960	Task	Closed	Ariel Jirau	Document How To Use AWS Secretes Manager	products: empty
LOPS-3947	Story	Closed	Mikhail Makarin	For Arrays/Plates, set security at the site level rather than the testing lab.	products: invalid values ['Other']
LOPS-3944	Story	Closed	Mai Ton-Nu	Migration of Instrument-related Master Data Items from LV1.0 to LOPS	products: invalid values ['Other']
LOPS-3940	Task	Closed	Matt Smith	Disable the oob installed admin user account in the LOPS PROD environment	products: empty
LOPS-3939	Task	Closed	Matt Smith	Create admin accounts for ENG and EPS	products: empty
LOPS-3938	Task	Closed	Matt Smith	Disable data_migration_user account	products: empty
LOPS-3937	Task	Closed	Matt Smith	Create data_migration_user account	products: empty
LOPS-3932	Task	Closed	Ariel Jirau	Implement AWS Secrets Manager to Store LOPS Non-Production Passwords	products: empty
LOPS-3927	Task	Closed	Meghana Joshi	CTA2 e2e Support	products: invalid values ['Signatera CLIA']
LOPS-3926	Task	Closed	—	Reagent Sync: switch log format to json	products: empty
LOPS-3918	Task	Closed	Ron Enson	Add Integration Tag to Base IT Class	products: empty
LOPS-3904	Task	Closed	—	Investigate if an Assay Complete message was sent for 01910adf-558c-7cc9-a256-b7329e67c72f in wes e2e env	products: invalid values ['Signatera WES']
LOPS-3903	Story	Closed	Vladimir Piyanov	Update SamRep message processing to Measurement object optional	products: invalid values ['Other']
LOPS-3883	Defect	Closed	Vladimir Piyanov	Messages under events.labops.workflow.status.v1 topic are not generated for sgNIPT e2e short TNP scenario.	products: invalid values ['sgNIPT']
LOPS-3881	Defect	Verified	Mikhail Makarin	Wes On X - Assay=canceled samples are included into Sequencing manifest	products: invalid values ['Signatera WES']
LOPS-3870	Task	Closed	Matt Smith	Create new Intf DB User and Set Permissions in LV Prod	products: empty
LOPS-3868	Task	Closed	Matt Smith	Execute Post-Install SQL Scripts for DB Setup and Configs	products: empty
LOPS-3845	Task	Closed	—	Link original and re-sequenced samples to the same patient	products: invalid values ['Signatera WES']
LOPS-3802	Task	Closed	Valeria Vargas	Accurate Histopath Workflow Steps Information	products: invalid values ['Signatera WES']
LOPS-3769	Task	Closed	Ariel Jirau	Implement AWS Secrets Manager to Store LOPS Production Passwords	products: empty
LOPS-3760	Task	Closed	Mai Ton-Nu	Data Migration of Reagents and EQMT into LOPS PROD for Launch	products: empty
LOPS-3720	Task	Closed	Leonid Garin	Sample Disposition Status	products: invalid values ['Signatera WES']
LOPS-3637	Task	Closed	Valeria Vargas	LOPS assay QC table is missing entries on control QCs	products: invalid values ['Signatera WES']
LOPS-3636	Task	Closed	Alex Pakhunov	Primer design metrics assay disposition status	products: invalid values ['Signatera WES']
LOPS-3635	Task	Closed	Mikhail Makarin	LOPS ASSAY_APPROVAL table needs date and user columns	products: invalid values ['Signatera WES']
LOPS-3630	Task	Closed	Brad Garrett	Spike: Investigate effort to refactor and simplify 'Record Tissue DNA Extraction' stepion'	products: invalid values ['Signatera WES']
LOPS-3625	Defect	Closed	Alex Pakhunov	Reagent-Sync connector is failing: ORA-01281: SCN range specified is invalid	products: invalid values ['Signatera WES']
LOPS-3576	Task	Closed	Leonid Garin	Create Inventory SQL	products: invalid values ['Other']
LOPS-3568	Story	Closed	Alex Pakhunov	Data Mesh - Array Package	products: invalid values ['Other']
LOPS-3544	Task	Closed	Vasilii Sevriugin	Create Dedicated Intf DB User	products: invalid values ['Signatera WES']
LOPS-3506	Task	Closed	Alex Pakhunov	Configure a new staging MSK environment to validate integration of LOPS Data Mesh service with Redshift	products: invalid values ['Other']
LOPS-3497	Task	Closed	Alex Pakhunov	Document a procedure for rolling out the reagent/eqmt sync to production	products: empty
LOPS-3474	Task	Closed	Deon Hughes	Write query to exclude expired and consumed reagent lots and containers in LV1.0 so that they are not migrated over to L	products: invalid values ['Other']
LOPS-3446	Tweak	Verified	Valeria Vargas	Record Exception Code information to support improved Exception Code selection during different stages of the workflow	products: invalid values ['sgNIPT']
LOPS-3343	Story	Closed	Meghana Joshi	Platform - Update Test Methods for Re-Run Samples Scheduled for Blood Extraction/Histopathology	products: invalid values ['Signatera WES']
LOPS-3261	Story	Closed	Alex Pakhunov	Create a python script for creating and delivering files to aws s3 bucket	products: invalid values ['Signatera WES']
LOPS-2806	Task	Closed	Ron Enson	Code refactor : Rename list page and task name	products: empty
LOPS-2789	Task	Closed	Hani Yakan	Code cleanup : Remove duplicate getMaxDataSetIds	products: invalid values ['Signatera WES']
LOPS-1984	Task	Closed	Matt Smith	Setup LDAP for user authentication	products: empty
LOPS-1493	Story	Closed	Alex Pakhunov	Instrument Sync to LV1.0	products: empty
LOPS-1382	Story	Verified	Leonid Garin	Data Mesh - Reagent Lot Package	products: invalid values ['Other']
LOPS-1171	Tweak	Closed	Olawale Dada	Assay List and Maint Page Updates	products: invalid values ['Signatera WES']
LOPS-774	Task	Closed	Lev Evstratov	Backward JSON Schema compatibility validation	products: invalid values ['Signatera WES']

LOPS Sprint 22 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7152	Task	Closed	—	Finish Configuration of RDS SSL for TCPS Secure Connection	products: invalid values ['sgNIPT']
LOPS-7139	Task	Opened	Leonid Garin	CLONE - Finish Configuration of RDS SSL for TCPS Secure Connection	products: empty
LOPS-3442	Task	Closed	—	Map steps between LV1 and LOPS for the IT analytics dashboard. Sequencing	products: invalid values ['Signatera WES']
LOPS-3441	Task	Closed	—	Map step names between LV1 and LOPS for the IT analytics dashboard. Histo	products: invalid values ['Signatera WES']
LOPS-3369	Task	Closed	Lev Evstratov	Move SQE Array Methods to Patch Init	products: empty
LOPS-3263	Story	Closed	Vasiliy Kumaev	Support manual recovery for when assays are created but testing doesn't get assigned to source samples	products: empty
LOPS-3244	Task	Closed	Lev Evstratov	Commit items found in e2e setup to repo	products: empty
LOPS-3236	Defect	Closed	Lev Evstratov	Assay Element query on the Sample Maint and View pages not working for child samples	products: invalid values ['Other']
LOPS-3235	Story	Closed	Ize Imai	Update ARM message processing to set correct site and security department on samples	products: empty
LOPS-3205	Defect	Closed	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	products: invalid values ['Signatera CLIA']
LOPS-3201	Task	Closed	Lev Evstratov	Review and Update Values Used for Log File Configs	products: empty
LOPS-3200	Task	Closed	Vasiliy Kumaev	Correct Issues and Variable Source for RDS Connection String	products: empty
LOPS-3199	Task	Closed	Leonid Garin	Finish Configuration of RDS SSL for TCPS Secure Connection	products: empty
LOPS-3195	Task	Closed	Ize Imai	Update SDC Sequence Update SQL Script and Deployment Location	products: empty
LOPS-3190	Task	Closed	Vasiliy Kumaev	Update Patch Only GitLab Deployment Job to Fail on Error	products: empty
LOPS-3163	Task	Closed	—	Strategy for getting the needed contents of patch-init into production	products: invalid values ['Signatera WES']
LOPS-3089	Tweak	Closed	Leonid Garin	LV should provide a filter to send Tissue POOLS back to Histopathology Re-Run from Assay QC	products: invalid values ['Other']
LOPS-2985	Story	Closed	Valeria Vargas	Fix QC Batch Item Type for Controls in Derivative QC Batches	products: empty
LOPS-2923	Task	Closed	Brandon Culver	Update CODEOWNERS permissions	products: invalid values ['sgNIPT']
LOPS-2682	Task	Closed	Leonid Garin	Create NtrException Constructor with Exception as Input	products: empty
LOPS-1996	Task	Closed	Vasiliy Kumaev	SPIKE: Investigate LOPS Web Container Frequent Crashing	products: empty
LOPS-1982	Story	Closed	Kersha Eddy	Reagent CLS Job type	products: empty
LOPS-1486	Story	Closed	Kersha Eddy	Add "Date placed in service" column to Instrument SDC	products: empty
LOPS-1443	Task	Closed	Lev Evstratov	Display "Environment is down for maintenance" to users during deployments	products: empty
LOPS-1303	Story	Closed	Brandon Culver	Create import process for creating reagent lot container trackitems	products: invalid values ['Signatera WES']

LOPS Sprint 23 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7149	Task	Closed	—	Add RDS Certification File to Intf Service	products: invalid values ['sgNIPT']
LOPS-7145	Task	Closed	Brandon Culver	Configure base LOPS sgNIPT and integration Database users accounts	products: invalid values ['sgNIPT']
LOPS-7136	Task	Opened	Vasilii Sevriugin	CLONE - Add RDS Certification File to Intf Service	products: empty
LOPS-7132	Task	Opened	Leonid Garin	CLONE - Requisition prod LOPS database password	products: invalid values ['Signatera WES']
LOPS-3502	Task	Closed	Valeria Vargas	Address Merge Conflict and Sync Launch Brand to Develop	products: empty
LOPS-3492	Defect	Closed	Matt Smith	Missing post-pipeline Kafka messages	products: invalid values ['Signatera WES']
LOPS-3486	Defect	Closed	Vasiliy Kumaev	Update assay qc page config for "Pipe Analysis QC" to resolve page load error	products: invalid values ['Signatera WES']
LOPS-3475	Defect	Closed	Valeria Vargas	LV_ReagentType is being populated in the linksdcid rather than Instrument on the vendoritem table linksdc when adding ve	products: invalid values ['Other']
LOPS-3473	Task	Closed	Vasilii Sevriugin	Add RDS Certification File to Intf Service	products: empty
LOPS-3471	Story	Closed	Kevin Detweiler	Remove the testing department on the query on the Choose Instrument window for datasets	products: invalid values ['Signatera WES']
LOPS-3464	Task	Closed	Vasiliy Kumaev	Logging - SapphireException thrown from BaseNateraAction loses stacktrace	products: invalid values ['Signatera WES']
LOPS-3453	Defect	Verified	Brandon Culver	Update ApplyChildSamplePlan‎ Event Plan to query against Assay AND WorkItem	products: invalid values ['Other']
LOPS-3444	Task	Closed	Leonid Garin	SQL query to retrieve a list of sample barcodes from ARRAY package in Snowflake	products: empty
LOPS-3423	Story	Closed	Valeria Vargas	Update Well-Level Worklist Generators to include leading zero for single digit wells	products: invalid values ['Signatera WES']
LOPS-3409	Task	Closed	Vasiliy Kumaev	Create SQL for Assay QC Data for DataMesh Package	products: invalid values ['Signatera WES']
LOPS-3408	Task	Closed	Klead Fusha	WESX-AV support LV-1.0	products: invalid values ['Signatera WES']
LOPS-3403	Tweak	Verified	Ize Imai	Add exception codes that will be received in the Short TNP messages	products: invalid values ['Other']
LOPS-3364	Story	Closed	Mikhail Makarin	Give users access to buttons/pages that support change of custody for samples	products: invalid values ['Signatera WES']
LOPS-3362	Defect	Closed	Lev Evstratov	Primer design sequencing manifest is not generated	products: invalid values ['Signatera CLIA']
LOPS-3354	Story	Closed	Monish Grover	Support barcode scanning for equipment and reagents in the corresponding lookup windows	products: empty
LOPS-3341	Tweak	Closed	Lev Evstratov	Update Volume Unit categories so they are available in Reagent Type configuration	products: invalid values ['Signatera WES']
LOPS-3337	Story	Closed	Lev Evstratov	Creation of new fields/columns on the instrument needed for bulk equipment update.	products: invalid values ['Signatera WES']
LOPS-3254	Task	Closed	Vasilii Sevriugin	Test and Confirm Multiple JBoss Servers and Correct Standalone File (Test Only)	products: empty
LOPS-3225	Task	Closed	Vladimir Piyanov	Store SamRep Feature flags as a LabVantage Policies	products: empty
LOPS-3221	Story	Closed	Vladimir Piyanov	Decrypt sample and kit barcodes received from SamRep	products: invalid values ['Other']
LOPS-3036	Task	Closed	Alex Pakhunov	Create script to push datamesh data to S3 bucket	products: invalid values ['Signatera WES']
LOPS-2981	Defect	Verified	Ize Imai	Custom SDC Template Attribute keygen config not incrementing	products: invalid values ['sgNIPT']
LOPS-2896	Story	Closed	Lev Evstratov	Bulk Equipment Update	products: empty
LOPS-2686	Task	Closed	Alex Pakhunov	Reagent Sync App Deployment	products: empty
LOPS-2337	Task	Closed	Valeria Vargas	Remove Old Assay Code Field on Test Method SDC	products: empty
LOPS-2308	Story	Closed	Ize Imai	Handle short TNP Scenario: Assay Request Message containing action.code = 'ERROR' and samples.action.code = 'ARCHIVE'	products: invalid values ['Signatera WES']
LOPS-2021	Task	Closed	Matt Smith	Setup database monitoring - E2E	products: empty
LOPS-1995	Task	Closed	—	Create NtrException Constructor with Exception	products: empty
LOPS-1481	Story	Closed	Mai Ton-Nu	Updates to instrument page queries	products: empty
LOPS-1367	Tweak	Closed	Brandon Culver	Create a method for migrating Reagent type data from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1366	Task	Closed	Brandon Culver	Create a method for migrating reagent lot track items from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1365	Task	Closed	Mai Ton-Nu	Create a method for migrating test methods from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1364	Task	Closed	Mai Ton-Nu	Create a method for migrating Parameter Lists from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1363	Task	Closed	Mai Ton-Nu	Create a method for migrating Parameters from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1362	Task	Closed	Mai Ton-Nu	Create a method for migrating Ref types from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1361	Task	Closed	Mai Ton-Nu	Create a method for migrating Container types from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-1360	Task	Closed	Brandon Culver	SPIKE - Investigate and document the design plan for Refactor of worklist and rundata buttons to make execution product	products: invalid values ['sgNIPT', 'Signatera WES']
LOPS-1306	Story	Closed	Vasiliy Kumaev	Create import process for creation of Reagent lot trackitems	products: invalid values ['Signatera WES']
LOPS-1295	Task	Closed	Ize Imai	Spike - Confirm Retain sample logic following LOPS-1135 implementation	products: invalid values ['Signatera WES']
LOPS-841	Task	Closed	Leonid Garin	Requisition prod LOPS database password	products: invalid values ['Signatera WES']
LOPS-698	Task	Closed	Lev Evstratov	Spike - Document the items required for Oracle Enterprise Installation	products: invalid values ['Signatera WES']

LOPS Sprint 24 (72 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7148	Task	Closed	—	Add RDS Certification File to Reagent Sync App	products: invalid values ['sgNIPT']
LOPS-7135	Task	Opened	Alex Pakhunov	CLONE - Add RDS Certification File to Reagent Sync App	products: empty
LOPS-3844	Story	Closed	Alex Pakhunov	Additional Instrument fields synchronization LOPS to LV 1.0	products: invalid values ['Signatera WES']
LOPS-3742	Task	Closed	—	Need Post Extractions and Post Library Prep concentrations values for Controls	products: invalid values ['Signatera WES']
LOPS-3719	Task	Closed	—	LOPS 1.0.0.0 RC 4 - Cherry picking of launch tickets, Round 2	products: invalid values ['Signatera WES']
LOPS-3718	Task	Closed	—	LV.LOPS.ASSAY table ASSAY_STATUS field populated incorrectly for lab QC failing samples	products: invalid values ['Signatera WES']
LOPS-3696	Task	Closed	Lev Evstratov	Create a query to retrieve ENDTIME for rows 54,55.	products: empty
LOPS-3679	Task	Closed	—	Should concordance metrics also be associated with matched normal sample?	products: invalid values ['Signatera WES']
LOPS-3676	Task	Closed	—	Link LOPS_SAMPLE_ID and LOPS_ASSAY_ID outside of ASSAY_QC table	products: invalid values ['Signatera WES']
LOPS-3673	Task	Closed	—	LOPS table ASSAY_APPROVAL: need date that a sample was dispositioned, user	products: invalid values ['Signatera WES']
LOPS-3668	Task	Closed	Alex Pakhunov	Data Package for runlog headers	products: invalid values ['Signatera WES']
LOPS-3663	Tweak	Closed	Vladimir Piyanov	Error not thrown when missing accessioningSourceSystem, accessionedBy, barcode or kitBarcode fields in samrep	products: invalid values ['Other']
LOPS-3662	Task	Closed	Alex Pakhunov	Need Equipment and Reagents used at each WES workflow step from Histopath / Extractions to Sequencing	products: invalid values ['Signatera WES']
LOPS-3659	Task	Closed	—	Map tissue barcode, casefileid given primer design pipeline launch request ID or assay request ID in LOPS	products: invalid values ['Signatera WES']
LOPS-3648	Story	Closed	Vasiliy Kumaev	Update validations and remove e-signature from "Complete Assay QC" Button	products: invalid values ['Signatera WES']
LOPS-3647	Defect	Closed	Lev Evstratov	Flaky: pipeline info message is not consumed due to a processing error	products: invalid values ['Signatera WES']
LOPS-3645	Task	Closed	Vasiliy Kumaev	LOPS 1.0.0.0 RC 4 - Cherry picking of launch tickets	products: invalid values ['Signatera WES']
LOPS-3629	Defect	Closed	Mai Ton-Nu	Instruments Page - "SDITag failed to retrieve data!"	products: invalid values ['Signatera WES']
LOPS-3626	Task	Closed	Leonid Garin	Row 7. Assay Workflow Status	products: invalid values ['Signatera WES']
LOPS-3623	Task	Closed	Alex Pakhunov	Fix SQL for Assay QC to address Primer Design QC missing data	products: invalid values ['Signatera WES']
LOPS-3621	Task	Closed	Mikhail Makarin	Row 12. Result codes. E2E issue: VV 8/28/2024. Provide a list of LOPS exception codes and map them to LIMS codes	products: invalid values ['Signatera WES']
LOPS-3620	Task	Closed	Leonid Garin	Row 12. E2E issue: HR 8/28/2024. SQL query for QC metrics changes is needed	products: invalid values ['Signatera WES']
LOPS-3617	Task	Closed	Alex Pakhunov	Row 4. E2E issue: VV 8/16/2024. Join Kepler and LOPS data for DAQ job	products: invalid values ['Signatera WES']
LOPS-3611	Task	Closed	Valeria Vargas	Create a query to retrieve SEQUENCINGRUN data.	products: empty
LOPS-3610	Task	Closed	Valeria Vargas	Create a query to retrieve RUNDATE.	products: empty
LOPS-3609	Task	Closed	Mikhail Makarin	Rows 50, 51. Create a query to retrieve MODDT.	products: empty
LOPS-3608	Task	Closed	Mikhail Makarin	Create a query to retrieve MODBY.	products: empty
LOPS-3606	Task	Closed	Leonid Garin	Row 10. E2E issue: VV 08/28/2024	products: invalid values ['Signatera WES']
LOPS-3603	Task	Closed	Meghana Joshi	Refactor WesCreateSequencingPrepAction to Allow Extra Params	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-3602	Task	Closed	Lev Evstratov	Create a query to retrieve ENDTIME.	products: empty
LOPS-3601	Task	Closed	Lev Evstratov	Create a query to retrieve STARTTIME.	products: invalid values ['Signatera WES']
LOPS-3600	Task	Closed	Lev Evstratov	Create a query to retrieve CREATEDT	products: invalid values ['Signatera WES']
LOPS-3599	Task	Closed	Mikhail Makarin	Row 7. E2E issue: HR SS 8/28/2024. Sample level metrics are missing from BATCH_QC table - continue	products: invalid values ['Signatera WES']
LOPS-3598	Sub-task	Closed	Mikhail Makarin	Row 7. E2E issue: HR SS 8/28/2024. Sample level metrics are missing from BATCH_QC table	products: invalid values ['Signatera WES']
LOPS-3597	Sub-task	Closed	Valeria Vargas	Row 7. E2E issue: VV: 8/23/2024 Batch QC LOPS	products: invalid values ['Signatera WES']
LOPS-3582	Task	Closed	Mikhail Makarin	Add test method name from Kafka message to map step between LV1 and LOPS. Histo	products: invalid values ['Signatera WES']
LOPS-3581	Task	Closed	Mikhail Makarin	Add a test method name from Kafka message to map step between LV1 and LOPS. Blood, Tissue	products: invalid values ['Signatera WES']
LOPS-3579	Task	Closed	Leonid Garin	Row 10. Tracking rejected sample	products: invalid values ['Signatera WES']
LOPS-3577	Task	Closed	Leonid Garin	Row 8. Investigate CONCENTRATION Values issue	products: invalid values ['Other']
LOPS-3575	Task	Closed	Leonid Garin	Create Product Agnostic SQL	products: invalid values ['Other']
LOPS-3542	Defect	Closed	Meghana Joshi	WES on X: Impossible to upload Ext Quant Rundata Results file for the tissue array, which has Cancelled sample	products: invalid values ['Signatera WES']
LOPS-3541	Defect	Closed	Meghana Joshi	WES on X: Impossible to upload Ext Quant Rundata Plating file for the array, which has Cancelled sample	products: invalid values ['Signatera WES']
LOPS-3540	Task	Closed	Matt Smith	LOPS 1.0.0.0 RC 3 deployment - E2E environment	products: invalid values ['Signatera WES']
LOPS-3539	Task	Closed	Valeria Vargas	LOPS 1.0.0.0 RC 3 deployment - PSPC environment	products: invalid values ['Signatera WES']
LOPS-3520	Story	Verified	Mikhail Makarin	Create a way to retrigger the Assay Complete message from the Assay list and maint page	products: invalid values ['Signatera WES']
LOPS-3518	Task	Closed	Valeria Vargas	SPIKE - Reagent QC Samples must be able to go through a pendingapproval step and land on the Lots Pending approval list	products: invalid values ['Other']
LOPS-3516	Task	Closed	Leonid Garin	Row 8. Investigate a mapping issues between Array and ARRAY_RESULTS tables	products: invalid values ['Signatera WES']
LOPS-3514	Story	Closed	Valeria Vargas	New button for the LOPS Reagent Qualification Report on both the Active Lots and the Lots Pending Approval list pages.	products: invalid values ['Signatera WES']
LOPS-3513	Story	Closed	Ron Enson	Add the a button to navigate to samples for review from consumable pages	products: invalid values ['Signatera WES']
LOPS-3512	Story	Closed	Gianna Bell-Eunice	Make the Expiry Date field mandatory on the LV_ReagentLotMaintPage	products: invalid values ['Signatera WES']
LOPS-3510	Task	Closed	Leonid Garin	Row 8. Decrease a number of samples returned in sample package	products: invalid values ['Other']
LOPS-3500	Story	Closed	Lev Evstratov	Add additional page queries to the Array List page for Assay QC	products: invalid values ['Signatera WES']
LOPS-3489	Task	Closed	Alex Pakhunov	Add RDS Certification File to Reagent Sync App	products: empty
LOPS-3477	Tweak	Closed	Mai Ton-Nu	Create a method for assigning quality sample test methods to consumables	products: invalid values ['Signatera WES']
LOPS-3451	Story	Closed	Mai Ton-Nu	Migrate Instrument master data from from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-3445	Task	Closed	Leonid Garin	SQL query to retrieve information array_barcode and assay workflow status from Snowflake	products: invalid values ['Signatera WES']
LOPS-3439	Story	Closed	Vasiliy Kumaev	Wes On X: QC Review - Accept Partial action doesn't release quant result datasets & TM doesn't get completed	products: invalid values ['Signatera WES']
LOPS-3430	Task	Closed	Alex Pakhunov	Update Kafka serializer from Avro to JSON	products: invalid values ['Signatera WES']
LOPS-3422	Task	Closed	—	Update information for IT dashboard	products: empty
LOPS-3421	Task	Closed	Alex Pakhunov	Configure a pipeline for a new Data Mesh service	products: empty
LOPS-3368	Task	Closed	Brandon Culver	Update CODEOWNERS permissions for sgNIPT devs	products: invalid values ['sgNIPT']
LOPS-3359	Story	Closed	Vasiliy Kumaev	Automatically send completed assay qc arrays with no metric failures to historical tramstop	products: invalid values ['Signatera WES']
LOPS-3256	Defect	Closed	Vasiliy Kumaev	Potential race condition with 'New Sample Created' events	products: invalid values ['Signatera WES']
LOPS-3255	Defect	Verified	Valeria Vargas	Potentially spurious Accessioning Site name mismatch	products: invalid values ['Signatera WES']
LOPS-3250	Defect	Closed	Mikhail Makarin	Duplicate sample IDs being shown after extraction quant	products: invalid values ['Signatera WES']
LOPS-3223	Tweak	Closed	Vladimir Piyanov	Use OKTA authentication to call SamRep	products: invalid values ['sgNIPT']
LOPS-3216	Task	Closed	Vasiliy Kumaev	Investigation of the WES Capture PCR Cleanup "dummy" parameter	products: invalid values ['Signatera WES']
LOPS-1890	Task	Closed	—	EQMT Management SOP Update	products: empty
LOPS-1008	Task	Closed	Ron Enson	Display External ID field on List and Maint pages for Product Config governed SDCs	products: empty
LOPS-1003	Tweak	Closed	Ron Enson	Update SQL Used in "By Array Method" LV Query	products: invalid values ['Signatera WES']
LOPS-377	Task	Closed	Vasilii Sevriugin	Spike Task - Investigate what Kafka security settings we are required to have according to Natera policies and standards	products: invalid values ['Signatera WES']
LOPS-56	Task	Closed	Leonid Garin	Transaction Table Purging Completed Messages and Time Retention	products: invalid values ['Signatera WES']

LOPS Sprint 28 (60 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7146	Task	Closed	—	Export all users from LOPS PROD and import into sgNIPT LOPS DB	products: invalid values ['sgNIPT']
LOPS-7133	Task	Opened	Valeria Vargas	CLONE - Spike - Document the tasks required to complete the production environment installation	products: invalid values ['Signatera WES']
LOPS-4858	Task	Closed	Brandon Culver	Remove Category and Role exports from Natera LV_ReagentType Custom Export Script	products: invalid values ['Other']
LOPS-4752	Defect	Closed	—	2 Pipe Job ID and 2 Pipe Job Status records created after Pipeline Info message is received and processed successfully	products: invalid values ['Other']
LOPS-4705	Task	Closed	—	Assay QC metrics - generate LOPS workflow status event in G64 AV env	products: invalid values ['Signatera GHP']
LOPS-4688	Task	Closed	—	Run regression for M2	products: empty
LOPS-4685	Task	Closed	—	Run regression for hotfix2	products: empty
LOPS-4659	Task	Closed	Deon Hughes	Create user account in LOPS PROD for Justin Jones	products: invalid values ['Signatera WES']
LOPS-4658	Defect	Closed	Valeria Vargas	Error message received when selecting reagent container with status In-line Valid	products: invalid values ['Signatera WES']
LOPS-4657	Task	Closed	Deon Hughes	Create child instruments for novaseq X	products: invalid values ['Signatera WES']
LOPS-4632	Task	Closed	—	Run WES regression for launch	products: invalid values ['Signatera WES']
LOPS-4631	Task	Closed	—	Run WES regression for launch	products: invalid values ['Signatera WES']
LOPS-4629	Task	Closed	—	Run WES regression for launch	products: invalid values ['Signatera WES']
LOPS-4628	Task	Closed	—	Run WES regression for launch	products: invalid values ['Signatera WES']
LOPS-4622	Task	Closed	Mikhail Makarin	Cherry pick tickets for LOPS M2 (1.0.2.0)	products: invalid values ['Other']
LOPS-4619	Task	Closed	Deon Hughes	Create NR0815 reagent in LOPS PROD for reagent sync	products: empty
LOPS-4618	Task	Closed	Deon Hughes	Create NR0826 reagent in LOPS PROD for reagent sync	products: empty
LOPS-4616	Task	Closed	Deon Hughes	Create NR0823 reagent in LOPS PROD for reagent sync	products: empty
LOPS-4604	Defect	Closed	Meghana Joshi	Wes on X: Assay QC - Can't send Blood samples to rerun from BE	products: invalid values ['Signatera WES']
LOPS-4584	Task	Closed	Matt Smith	Create a new branch for M2	products: empty
LOPS-4581	Task	Closed	Matt Smith	Give RO access to LOPS db	products: empty
LOPS-4576	Tweak	Closed	Alex Pakhunov	Missing/inaccessible "Close Incident" button	products: invalid values ['Signatera WES']
LOPS-4566	Task	Closed	Brandon Culver	Update LV_CrossSDICalcDef and ParamList SDC export scripts to pull Inter SDI Calcs in ParamList exports	products: invalid values ['sgNIPT']
LOPS-4559	Defect	Closed	Vladimir Piyanov	Primer Design ARM request was not processed with error	products: invalid values ['Signatera WES']
LOPS-4555	Defect	Closed	—	SEQ Manifest failing with ARJUNA016053 error	products: invalid values ['Signatera WES']
LOPS-4554	Task	Closed	Isaac Vargas	Disable the reagent expiry tasks	products: invalid values ['Signatera WES']
LOPS-4553	Task	Closed	Deon Hughes	Create admin account for Harris and Swati	products: empty
LOPS-4551	Task	Closed	—	Assess whether M1 branch supports ARM messages produced against v 1.18	products: invalid values ['Signatera WES']
LOPS-4541	Defect	Closed	Kevin Detweiler	WES-X During Child Sample creation, page would get stuck while it saved	products: invalid values ['Signatera WES']
LOPS-4539	Task	Closed	—	Provide LOPS Access to Ryan Casillo and Amelaine Almacen	products: invalid values ['Signatera WES']
LOPS-4238	Task	Closed	—	Provide LOPS Access to ENG resources	products: invalid values ['Signatera WES']
LOPS-4223	Task	Closed	Matt Smith	Create RO User for DataMesh DMS Service	products: empty
LOPS-4198	Task	Closed	Mikhail Makarin	SamRep Post-Launch: Move RestClientPolicy to lv_exported_init	products: empty
LOPS-4197	Sub-task	Closed	—	Include labvantagedoc.war to labvantagehome_installed.zip v LV8.8.0 (LOPS project)	products: invalid values ['Signatera WES']
LOPS-4192	Story	Closed	Kevin Detweiler	Additional Role configuration on samples pages	products: invalid values ['Other']
LOPS-4191	Story	Closed	Kevin Detweiler	Create additional Roles	products: invalid values ['Other']
LOPS-4190	Defect	Closed	Kevin Detweiler	Primer design sequencing manifest is not generated	products: invalid values ['Signatera WES']
LOPS-4181	Task	Closed	Alex Pakhunov	Spike - Issues related to Reagent Sync	products: invalid values ['Other']
LOPS-4129	Story	Closed	Ron Enson	Create a new button on Consumable-related pages.	products: invalid values ['Other']
LOPS-4121	Task	Closed	Vasiliy Kumaev	Remove the Accessioning schema from being registered as part of LOPS deployments	products: empty
LOPS-4068	Defect	Closed	Meghana Joshi	Dispositioned Assays get their status updated from Completed to InProgress	products: invalid values ['Signatera WES']
LOPS-4049	Story	Verified	Ize Imai	Update Exception SDC to include sourceSystem and status	products: invalid values ['sgNIPT']
LOPS-4048	Task	Closed	Leonid Garin	Cherry pick LOPS-3216 into the WES-X launch branch	products: invalid values ['Signatera WES']
LOPS-4023	Story	Verified	Ize Imai	Include sourceSystem and status for Exceptions generated in LOPS	products: invalid values ['sgNIPT']
LOPS-3950	Story	Closed	Lev Evstratov	Support Assay Request Messages with ERROR or CANCEL action codes	products: invalid values ['sgNIPT']
LOPS-3852	Task	Closed	Vasilii Sevriugin	Review and Correct Problematic Errors from Web Container Logs	products: empty
LOPS-3790	Defect	Closed	Leonid Garin	Primer Design ARM request v1.18 is not processed successfully	products: invalid values ['Other']
LOPS-3782	Story	Verified	Hani Yakan	Update SampleTypeTmPlateLoad query in LOPS	products: invalid values ['sgNIPT']
LOPS-3775	Task	Closed	—	Run regression test for WES	products: invalid values ['Signatera WES']
LOPS-3774	Task	Closed	—	Run regression test for WES	products: invalid values ['Signatera WES']
LOPS-3773	Task	Closed	—	Run regression test for WES	products: invalid values ['Signatera WES']
LOPS-3722	Tweak	Verified	Brandon Culver	View Samples created in Array on SampleList page	products: invalid values ['sgNIPT']
LOPS-3535	Task	Closed	Vasiliy Kumaev	Create API definition in swaggerhub	products: invalid values ['sgNIPT']
LOPS-3501	Task	Closed	Leonid Garin	Include LabVantage manual/vendor documentation in the production env	products: invalid values ['Signatera WES']
LOPS-3323	Story	Closed	Leonid Garin	Replace lvtransprocessor scheduled task with a db trigger to handle transaction processing	products: invalid values ['Signatera WES']
LOPS-2612	Task	Closed	Leonid Garin	Sequencing Run Complete - Set up new topic for lr-pcr (PacBio)	products: invalid values ['sgNIPT']
LOPS-2242	Story	Closed	Kevin Detweiler	Update the LIMS Menu for Read-Only Jobtype	products: invalid values ['Other']
LOPS-1491	Story	Closed	Ron Enson	Decommissioned Instruments	products: invalid values ['Signatera WES']
LOPS-1037	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing	products: invalid values ['Horizon X']
LOPS-699	Task	Closed	Valeria Vargas	Spike - Document the tasks required to complete the production environment installation	products: invalid values ['Signatera WES']

LOPS Sprint 20241230 (33) (49 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5330	Task	Closed	Klead Fusha	Cherry picking LOPS-5269 into LOPS 1.1.0.1 (Hotfix 6)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5326	Task	Closed	—	Final automated testing for the LOPS 1.1.0.1 release candidate	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5324	Defect	Closed	Klead Fusha	Problems with an extraction re-quant button	products: invalid values ['Signatera GHP']
LOPS-5308	Task	Closed	Kathy Dao	Investigate how to associate cfDNA FFE control thresholds to control lots in LOPS	products: invalid values ['sgNIPT']
LOPS-5304	Task	Closed	Mai Ton-Nu	New computer setup	products: empty
LOPS-5303	Task	Closed	Mai Ton-Nu	New computer setup	products: empty
LOPS-5302	Task	Closed	Mai Ton-Nu	New computer setup	products: empty
LOPS-5282	Task	Closed	Olawale Dada	Remove non-breaking spaces pt. 2	products: invalid values ['sgNIPT']
LOPS-5279	Task	Closed	—	Fix memory killed error on python script to export db data to s3	products: empty
LOPS-5270	Task	Closed	Michael Livingston	Update Primer Plate Map Standard export script to have "Natera" prefix	products: invalid values ['sgNIPT']
LOPS-5268	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 17 (33)	products: invalid values ['sgNIPT']
LOPS-5259	Task	Closed	—	Merge M3 items to Production in Jama	products: invalid values ['Signatera WES']
LOPS-5252	Task	Closed	Leonid Garin	Merge missed MR for LOPS-3935 into LOPS 1.1.1.0	products: invalid values ['Other']
LOPS-5229	Task	Closed	Mikhail Makarin	Add Missing Changes from LOPS-4236	products: empty
LOPS-5214	Defect	Verified	Gianna Bell-Eunice	"Size Multiplier" is not populating for "sgNIPT gDNA CFTR LR-PCR Quantification" array method	products: invalid values ['sgNIPT']
LOPS-5211	Task	Closed	Meghana Joshi	Update System Config Setting for Performance Stats as Part of Deployment	products: empty
LOPS-5208	Task	Closed	—	Create a gitlab project to maintain labworkflows datamesh code assets	products: empty
LOPS-5207	Tweak	Verified	Lev Evstratov	Update Assay Templates to set "Template Type" as a mandatory field	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5204	Story	Verified	Gianna Bell-Eunice	cfDNA Sequencing Run Complete RunDetails addition, gDNA Seq Run update	products: invalid values ['sgNIPT']
LOPS-5164	Defect	Closed	Lev Evstratov	Transaction Type form is crashed	products: invalid values ['Signatera WES']
LOPS-5152	Story	Verified	Laura Dietrick	gDNA Group Test method reorganization Update	products: invalid values ['sgNIPT']
LOPS-5150	Story	Verified	Krishna Tanuku	Update to resolve issue seen for recalc retrigger on cfDNA Pool Quant array method	products: invalid values ['sgNIPT']
LOPS-5145	Story	Verified	Monish Grover	Updates to gDNA Library Prep Test methods, parameter List and Array Methods	products: invalid values ['sgNIPT']
LOPS-5139	Story	Verified	Kathy Dao	Configure Verso Freezer StorageUnitType	products: invalid values ['sgNIPT']
LOPS-5114	Story	Verified	Krishna Tanuku	gDNA Sequencing Run Complete RunDetails Test method and PL	products: invalid values ['sgNIPT']
LOPS-5109	Story	Verified	Monish Grover	gDNA LR-PCR Pool Purification array method	products: invalid values ['sgNIPT']
LOPS-5105	Story	Verified	Krishna Tanuku	Updates to cfDNA sequencing done complete message	products: invalid values ['sgNIPT']
LOPS-5075	Task	Closed	—	G64 Regression Testing - Petar	products: invalid values ['Signatera GHP']
LOPS-5072	Story	Closed	Kevin Detweiler	WES: 'Lab Ops' User Access to QC Report (Test Only)	products: invalid values ['Signatera WES']
LOPS-5068	Story	Verified	Vasiliy Kumaev	Build Generate Worklist on Box List page for Library Prep End Repair	products: invalid values ['sgNIPT']
LOPS-5059	Story	Verified	Monish Grover	Update to Pool Dilution array transfer method	products: invalid values ['sgNIPT']
LOPS-5054	Story	Verified	Laura Dietrick	Updates to cfDNA barcode primer plates	products: invalid values ['sgNIPT']
LOPS-5046	Story	Verified	Krishna Tanuku	Update name and description for LibPrep Quant to PostLib Quant test method, param list, spec	products: invalid values ['sgNIPT']
LOPS-5009	Task	Closed	—	G64 Launch Build 1 - Demo deployment	products: invalid values ['Signatera GHP']
LOPS-5007	Task	Closed	—	G64 Launch Build 1 - PSPC deployment	products: invalid values ['Signatera GHP']
LOPS-4978	Defect	Closed	Meghana Joshi	On array list pages, the Sequencing By Patient Sample Identifier query does not work for tissue samples	products: invalid values ['Signatera WES']
LOPS-4932	Story	Verified	Krishna Tanuku	Array Methods Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	products: invalid values ['sgNIPT']
LOPS-4902	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (more than one topic)	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4679	Task	Closed	Matt Smith	Create user account in LOPS prod	products: empty
LOPS-4668	Defect	Verified	Swati Giri	Wes On X: Capture QC Review: Reject - QC Pass Pool samples have WESSequencingPrepWorkflow TM assigned	products: invalid values ['Signatera WES']
LOPS-4624	Story	Verified	Gianna Bell-Eunice	LR-PCR Quantification array method Calculation Updates	products: invalid values ['sgNIPT']
LOPS-4612	Story	Closed	—	gDNA extraction quantification worklist generation	products: invalid values ['sgNIPT']
LOPS-4224	Tweak	Verified	Isaac Vargas	WES: Display Expiration Date for Selected Reagent	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-4174	Story	Verified	Vadim Gusev	Implement integration module with PIPE API Server	products: invalid values ['sgNIPT']
LOPS-4112	Story	Verified	Olawale Dada	Update gDNA Sequence Pool Dilution TM, PM, and Array Method to "sgNIPT gDNA Pool Dilution"	products: invalid values ['sgNIPT']
LOPS-4101	Story	Verified	Laura Dietrick	gDNA LR-PCR Primer plate setup (HBA)	products: invalid values ['sgNIPT']
LOPS-4026	Story	Verified	Laura Dietrick	cfDNA Master Mix part number set up (MM0004-MM0008)	products: invalid values ['sgNIPT']
LOPS-3933	Story	Verified	Lev Evstratov	Update the current query NtrQCBatchSelectExisitingBatch	products: invalid values ['sgNIPT']
LOPS-3914	Task	Closed	Vasilii Sevriugin	Create Troubleshooting Guide for Intf Service	products: empty

LOPS Sprint 30 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4950	Task	Closed	—	Update helm configuration to fix development LabVantage db persistence	products: empty
LOPS-4929	Task	Closed	Isaac Vargas	Resolve merge conflicts for Consumable Types	products: invalid values ['Other']
LOPS-4918	Task	Closed	Ron Enson	RE - Ticket for "big merge" review	products: empty
LOPS-4917	Task	Closed	Hani Yakan	HY - Ticket for "big merge" review	products: empty
LOPS-4898	Task	Closed	Vasilii Sevriugin	Cloud config for LV Labworkflows-Pipeline-Integration REST policy	products: invalid values ['sgNIPT']
LOPS-4866	Task	Closed	—	Investigate why some samples in Production env are showing up as part of the San Carlos depts	products: invalid values ['Signatera WES']
LOPS-4856	Task	Closed	Deon Hughes	Add San Carlos site to users	products: empty
LOPS-4821	Task	Closed	Meghana Joshi	Merge the WES-X Post-Launch P1 branch into M4	products: invalid values ['Signatera GHP']
LOPS-4809	Story	Verified	Ize Imai	Refactor u_sourcesystem to u_ntrsystem	products: invalid values ['sgNIPT']
LOPS-4733	Task	Closed	Mikhail Makarin	Review and Correct DataDog Errors	products: empty
LOPS-4709	Story	Verified	Vadim Gusev	Implement request conversion logic for Algs requests	products: invalid values ['sgNIPT']
LOPS-4633	Story	Verified	Brandon Culver	Update sgNIPT Plate Worklist Task button to use new worklist policy	products: invalid values ['sgNIPT']
LOPS-4606	Story	Closed	Alex Pakhunov	Reagent Sync: Unit conversion	products: invalid values ['Signatera WES']
LOPS-4592	Defect	Closed	Meghana Joshi	Assay QC - "Number of Samples" value includes filler samples	products: invalid values ['Signatera WES']
LOPS-4549	Story	Closed	Ron Enson	Add 'General' consumable class	products: invalid values ['Other']
LOPS-4149	Story	Closed	Ron Enson	Add Natera Lot Number column to the LV_ReagentSampleList page	products: invalid values ['Other']
LOPS-4065	Task	Closed	Ariel Jirau	Develop PoC Terraform code	products: empty
LOPS-3875	Story	Verified	Lev Evstratov	Update QCBatchdataentry>Detail Panel to include Natera Barcode or add Natera barcode directly on page	products: invalid values ['sgNIPT']
LOPS-3081	Defect	Closed	Meghana Joshi	Passed Blood Samples are Allowed to be sent for Rework, missing validation.	products: invalid values ['Signatera WES']
LOPS-2615	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for NGS metric output json and add to Swaggerhub	products: empty
LOPS-2614	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for sgNIPT algorithm metric output json and add to Swaggerhub	products: empty
LOPS-2611	Task	Closed	Leonid Garin	Illumina NGS Sequencing Run Complete - Set up new topic	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-2313	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for lr-pcr PacBio metric output json and add to Swaggerhub	products: invalid values ['sgNIPT']

LOPS Sprint 27 (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4170	Task	Closed	Alex Pakhunov	Reagent Sync: update helm chart to get rid of istio proxy.	products: empty
LOPS-4166	Task	Closed	Alex Pakhunov	Reagent Sync: set default labops topic retention to 2 weeks	products: empty
LOPS-4162	Task	Closed	—	Create new branch for M1	products: empty
LOPS-4143	Task	Closed	Matt Smith	Update s3 location for prod data mesh	products: empty
LOPS-4141	Task	Closed	Alex Pakhunov	lv-reagent-synchronization-datasource connector fails in prod	products: empty
LOPS-4132	Task	Closed	Kathy Dao	KD - Ticket for creation of PSPC Phase 2 process	products: invalid values ['sgNIPT']
LOPS-4131	Task	Closed	Ariel Jirau	Develop quick guide documentation for Kubernetes local environment setup and basic use	products: empty
LOPS-4124	Task	Closed	Ariel Jirau	Deploy PoC EKS on existing lops-dev account VPC	products: empty
LOPS-4123	Task	Closed	Vladimir Piyanov	Cherry pick changes for LOPS M1 release with ARM preview	products: empty
LOPS-4120	Story	Verified	Ron Enson	Add 'Tracer' to the Reagent Class reftype	products: invalid values ['Other']
LOPS-4118	Story	Verified	Ron Enson	Add the button configured in LOPS-3513 to additional consumable list pages	products: invalid values ['Other']
LOPS-4117	Task	Closed	Ariel Jirau	Develop quick guide documentation for Gitlab & Terraform integration	products: empty
LOPS-4114	Task	Closed	Alex Pakhunov	Transform security department during sync from LOPS to LV1.0 and LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-4107	Story	Verified	Hani Yakan	Create LV1.0 users that are not going to exist in LOPS as users in LOPS with a de-activated status.	products: invalid values ['Other']
LOPS-4106	Task	Closed	Ize Imai	Knowledge share for action archiving files in shared drive	products: empty
LOPS-4085	Task	Closed	Matt Smith	Deploy the WesX Launch Branch to LOPS Production	products: empty
LOPS-4047	Epic	Closed	Ariel Jirau	Configure Gitlab Keyless Access to AWS Dev Account	products: empty
LOPS-4030	Task	Closed	Hani Yakan	E2E Plate data extract	products: invalid values ['Signatera WES']
LOPS-4017	Story	Closed	Ron Enson	Add u_commonname back to the instrument sdc	products: invalid values ['Other']
LOPS-4007	Task	Closed	Lev Evstratov	Access Run Data Processing Code and Policy for Master Data Versioning	products: empty
LOPS-3952	Task	Closed	Hani Yakan	Python script to automate LabVantage user account creation	products: invalid values ['Signatera WES']
LOPS-3925	Task	Closed	Vasilii Sevriugin	Create New Repo For Pipeline Integration Connector	products: empty
LOPS-3764	Task	Closed	Leonid Garin	Validate the sample query provided for validation complete date (tissue sample)	products: invalid values ['Signatera WES']
LOPS-3583	Task	Closed	Vasiliy Kumaev	Create a dedicated API user for the RIR endpoint	products: invalid values ['sgNIPT']
LOPS-3498	Task	Closed	Alex Pakhunov	Enable datadog monitoring for reagent/eqmt sync in production	products: empty
LOPS-2891	Task	Closed	Meghana Joshi	Address WorkItemDbUtil.getParamLists query and usages that's not accounting for workItemVersions other than 1	products: empty
LOPS-2505	Task	Closed	—	Set up connection to Pipeline's Rest API for pipeline integration	products: empty
LOPS-1884	Defect	Closed	Olawale Dada	Wes on X: QC Batch: Data Entry: Return button returns to QC Batch List page	products: invalid values ['Signatera WES']
LOPS-1670	Story	Verified	Vasiliy Kumaev	Implement way to Disposition Wet Lab Only Assays	products: invalid values ['sgNIPT']
LOPS-1449	Task	Closed	Lev Evstratov	Assess robustness of paramlist auto-upversioning and how that interacts with patching/deployment	products: empty
LOPS-1329	Story	Closed	Mai Ton-Nu	Review reagents data in LV1.0 / LOPS after sync is enabled	products: invalid values ['Signatera WES']
LOPS-961	Story	Closed	Meghana Joshi	Historical Reviews	products: invalid values ['Signatera WES']
LOPS-856	Task	Closed	Leonid Garin	Add RSET Index Rebuild Job to Maintenance Release Pipeline	products: invalid values ['Signatera WES']

LOPS Sprint 21 (42 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3194	Task	Closed	Mai Ton-Nu	Create list of mapping of all foreign keys associated to TestMethod SDC	products: empty
LOPS-3193	Task	Closed	Mai Ton-Nu	Create list of mapping of all foreign keys associated to Instrument SDC	products: empty
LOPS-3192	Task	Closed	Kersha Eddy	Create list of mapping of all foreign keys associated to Reagent Lot	products: empty
LOPS-3191	Task	Closed	Kersha Eddy	Create list of mapping of all foreign keys associated to Reagent Type	products: empty
LOPS-3154	Task	Closed	Vasilii Sevriugin	Unable to send Kafka messages in the LOPS UAT sandbox environment	products: invalid values ['Signatera WES']
LOPS-3122	Story	Closed	Lev Evstratov	Update policy controlling Reagent Container barcodes to remove kit	products: invalid values ['Signatera WES']
LOPS-3094	Tweak	Closed	Valeria Vargas	Update the events.accessioning.sample.info.v1 topic for additional properties for Bridge	products: empty
LOPS-3066	Tweak	Verified	—	Commit Reagent array method to repository	products: empty
LOPS-3045	Task	Closed	Lev Evstratov	DevTools Script to Complete WES Blood Extraction Quant Workflow Step	products: empty
LOPS-3004	Task	Closed	Ize Imai	DevTools Script to Setup WES Tissue Extraction Workflow Step - Tissue Block	products: empty
LOPS-3003	Task	Closed	Lev Evstratov	DevTools Script to Complete WES Blood Extraction Workflow Step	products: empty
LOPS-2995	Defect	Closed	Krishna Tanuku	Container crashes with System Memory Dump in some Child Sample Creation scenarios	products: invalid values ['Signatera WES']
LOPS-2990	Defect	Closed	Monish Grover	Fix Assay Element query on the Sample Maint and View pages	products: invalid values ['Other']
LOPS-2989	Task	Closed	Krishna Tanuku	Add missing departments to the Admin user	products: empty
LOPS-2965	Task	Closed	Vasilii Sevriugin	Create Integration Test for Wes Blood Extraction	products: empty
LOPS-2964	Story	Closed	Krishna Tanuku	Consumable Class is mandatory when creating a new Consumable Type	products: invalid values ['Signatera WES']
LOPS-2936	Story	Closed	Leonid Garin	Rework Blood from Extraction: Update Validations and Fix Error Message	products: invalid values ['Other']
LOPS-2920	Tweak	Closed	Vasiliy Kumaev	Test Only: Rework Incident Template	products: empty
LOPS-2915	Task	Closed	Vasiliy Kumaev	Update the UUIDs generated in LOPS to be in v7 format instead of v4	products: empty
LOPS-2881	Story	Closed	Vasiliy Kumaev	OOTB rejectPlate() Rejects the first dataset, instead of the last	products: invalid values ['Signatera WES']
LOPS-2841	Story	Closed	Krishna Tanuku	Equipment ID generation	products: empty
LOPS-2645	Story	Closed	Valeria Vargas	Assay Maint Page Updates	products: empty
LOPS-2642	Task	Closed	Lev Evstratov	Refactor/extend the gen_runlogs script to support other products	products: empty
LOPS-2573	Task	Closed	Deon Hughes	Draft sql queries for all packages	products: empty
LOPS-2381	Story	Closed	Brandon Culver	Display Reagent Container barcodes	products: invalid values ['Signatera WES']
LOPS-2374	Story	Closed	Leonid Garin	The system shall have the departmental security defined on the required SDCs.	products: empty
LOPS-2363	Tweak	Closed	Lev Evstratov	E-Signature Capture During Dataset Approval/Rejection for Controls in Assay QC	products: empty
LOPS-2326	Task	Closed	Mikhail Astafev	setting default KEH on k8s not in Rancher anymore	products: empty
LOPS-2054	Task	Closed	—	Add and configure all Valid Assay codes	products: empty
LOPS-1650	Task	Closed	Ize Imai	The system shall have the ability to receive SOS Kafka message	products: invalid values ['Horizon X', 'sgNIPT']
LOPS-1490	Story	Closed	Mai Ton-Nu	Record equipment information	products: empty
LOPS-1489	Story	Closed	Mai Ton-Nu	Create a method for identifying and filtering by work order due date range and overdue	products: empty
LOPS-1415	Story	Closed	Mai Ton-Nu	RND EQP - Equipment categorization for filtering / searching	products: invalid values ['Other']
LOPS-999	Story	Closed	Alex Pakhunov	Implement the ability to sync incident id from LOPS to LV1.0	products: invalid values ['Signatera WES']
LOPS-998	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot data from LOPS to LV1.0 and LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-728	Story	Closed	Alex Pakhunov	Reagent lot Container Trackitem Sync	products: invalid values ['Signatera WES']
LOPS-727	Sub-task	Closed	Chris Lott	Update the processor to include reagent lots	products: invalid values ['Signatera WES']
LOPS-722	Story	Closed	Alex Pakhunov	Implement the ability to sync Reagent Lot data	products: invalid values ['Signatera WES']
LOPS-713	Task	Closed	Brandon Culver	Spike - Investigate and document plan for remaining consumable barcodes	products: invalid values ['Signatera WES']
LOPS-681	Sub-task	Closed	Chris Lott	Create the database objects necessary to sync workflow created reagent lots from LV1.0 to LOPS	products: invalid values ['Signatera WES']
LOPS-680	Sub-task	Closed	Chris Lott	Create the database objects necessary to sync reagent lots from LOPS to LV1.0	products: invalid values ['Signatera WES']
LOPS-608	Story	Closed	Monish Grover	LOPS Reagent Qualification Report	products: invalid values ['Signatera WES']

LOPS Sprint 20 (27 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3172	Defect	Verified	Lev Evstratov	Workitem status "Initial" does not change if assay was cancelled	products: invalid values ['Other']
LOPS-3164	Task	Closed	Vasiliy Kumaev	Update Web Container Scripts for RDS Connection URL Params	products: empty
LOPS-3160	Defect	Verified	Leonid Garin	The assay can not be failed in edit assay page	products: invalid values ['Other']
LOPS-3107	Task	Closed	Leonid Garin	Set Job Types to Have Default Menu and URL	products: empty
LOPS-3106	Tweak	Closed	Leonid Garin	Fix Calculation Rule on Pathologist Review	products: empty
LOPS-3044	Defect	Closed	Valeria Vargas	WES on X must fix for e2e: Assay QC Control Analysis Review page comes up empty	products: invalid values ['Other']
LOPS-3038	Defect	Closed	Valeria Vargas	Jasper Reports for Controls are not opening correctly	products: invalid values ['Other']
LOPS-3001	Task	Closed	Hani Yakan	Implement Argument Overrides for DevTools Workflow Script	products: empty
LOPS-3000	Task	Closed	Hani Yakan	Add and Use New Timestamp Util Functions in a LV Accepted Format	products: empty
LOPS-2991	Sub-task	Closed	Hani Yakan	wes_workflow_setup.py figure out which arguments for override	products: empty
LOPS-2980	Sub-task	Closed	Hani Yakan	wes_workflow_setup.py config directory to the path	products: empty
LOPS-2978	Story	Closed	Lev Evstratov	The error message when apply "Fail Assay" for assay with InProgress status in Sample Analysis Review page	products: invalid values ['Other']
LOPS-2976	Task	Closed	Matt Smith	Create Base DevTools Scripts to Support WES Blood Extraction Data Setup	products: empty
LOPS-2930	Defect	Closed	Lev Evstratov	Unable to Cancel WorkItems due to SDIWorkItem SDC Audit Config	products: invalid values ['Signatera WES']
LOPS-2928	Defect	Verified	Monish Grover	Controls are not displayed in Wes DAQ Assay QC	products: invalid values ['Other']
LOPS-2909	Task	Closed	Matt Smith	Add Support for Kafka on MSK	products: empty
LOPS-2846	Defect	Closed	Lev Evstratov	QNT1 plate samples list contains double instances of samples and the second instance is unavailable	products: invalid values ['Other']
LOPS-2829	Task	Closed	Kathy Dao	Sample Management, Histopathology and Security Support	products: empty
LOPS-2676	Tweak	Closed	Olawale Dada	Add new departments	products: empty
LOPS-2457	Story	Closed	Ize Imai	Refactor "Use Retain Sample" functionality	products: empty
LOPS-2038	Tweak	Closed	Kevin Detweiler	Configure roles to Reagent related pages and update existing job types	products: empty
LOPS-1978	Story	Closed	Kevin Detweiler	Add Reagent Job types and update existing job types	products: empty
LOPS-1976	Story	Closed	Jonathan Quinn	Create LabOps Operator and LabOps Manager	products: empty
LOPS-1667	Story	Closed	Laura Dietrick	Create Extraction Manager and Extraction Operator job type	products: empty
LOPS-1000	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot trackitem data from LOPS to LV1.0	products: invalid values ['Signatera WES']
LOPS-800	Task	Closed	Vasilii Sevriugin	Remove Unused Legacy Code in Sprig Boot INTF Service	products: invalid values ['Signatera WES']
LOPS-494	Defect	Closed	Valeria Vargas	Unable to send status message on Applied flag set to 'Y'	products: invalid values ['Other']

LOPS Sprint 19 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3020	Task	Closed	Matt Smith	Update Centos Download Mirror on Build Scripts	products: empty
LOPS-2895	Story	Closed	Leonid Garin	Updates to early assay termination logic	products: empty
LOPS-2845	Defect	Closed	Valeria Vargas	Error accessing Jasper reports	products: invalid values ['Other']
LOPS-2830	Task	Closed	Kathy Dao	Support Security and Onboarding	products: empty
LOPS-2828	Task	Closed	Kathy Dao	Sample Management Support and Onboarding	products: empty
LOPS-2817	Story	Verified	Vasiliy Kumaev	Fix issue with re-uploading quant rundata	products: invalid values ['Other']
LOPS-2759	Story	Closed	Leonid Garin	Support bulk restart from extractions for WES in Assay QC	products: empty
LOPS-2758	Story	Closed	Vasiliy Kumaev	Support Tissue Rework from Histopathology in Assay QC	products: empty
LOPS-2757	Story	Closed	Vasiliy Kumaev	Array Genealogy Page updates	products: empty
LOPS-2679	Task	Closed	Mai Ton-Nu	Create equipment categorization strategy and spreadsheet	products: empty
LOPS-2674	Story	Closed	Leonid Garin	Update Sequencing Run Complete Message to Complete Sequencing Test Method on Samples	products: empty
LOPS-2624	Task	Closed	Lev Evstratov	Add uL unit converstion to mL	products: empty
LOPS-2583	Story	Closed	Vasiliy Kumaev	Update "Accept Partial" action during Array QC Review to set array status to "Reviewed"	products: empty
LOPS-2566	Defect	Closed	Valeria Vargas	Assay IDs are not getting copied to the new workitems assigned to the tissue gDNA samples that are created after extract	products: invalid values ['Other']
LOPS-2478	Defect	Verified	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	products: invalid values ['Signatera CLIA']
LOPS-2349	Story	Closed	Kevin Detweiler	Validate equipment location	products: empty
LOPS-2271	Defect	Closed	Valeria Vargas	Jasper report: update color coding thresholdFlag = PASSED_WITH_WARNINGS to red	products: invalid values ['Other']
LOPS-2241	Tweak	Closed	Olawale Dada	Configure roles to QC Batch related pages and update existing job types	products: empty
LOPS-2028	Story	Closed	Lev Evstratov	Display the product config ID and name in Assay QC UI for the control sample types	products: empty
LOPS-2009	Tweak	Closed	Jonathan Quinn	Configure roles to Sample related pages and update existing job types	products: empty
LOPS-1900	Task	Closed	—	General support PSPC testing. Sprint 19	products: empty
LOPS-1899	Task	Closed	—	General support PSPC testing. Sprint 18	products: empty
LOPS-1482	Story	Closed	Monish Grover	View next/last calibration and PM dates for instruments	products: empty
LOPS-1006	Story	Closed	Ize Imai	Refactor the SELECT, RETAIN, and ARCHIVE sample tracking	products: empty
LOPS-997	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent type data from LOPS to LV1.0	products: invalid values ['Signatera WES']
LOPS-715	Story	Closed	Ilya Savinov	Reagent Type Sync from LOPS to LV1.0 (LOPS ticket)	products: invalid values ['Signatera WES']

LOPS Sprint 18 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2897	Task	Closed	Matt Smith	Restore Previous DB Docker Image Tag	products: empty
LOPS-2717	Defect	Verified	Brandon Culver	Fix query for source plates in the Sequence Manifest (Single Batch)	products: invalid values ['Other']
LOPS-2639	Defect	Closed	Brandon Culver	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest: Single row expected instea	products: invalid values ['Other']
LOPS-2549	Story	Verified	Lev Evstratov	Update Primer lookups in Sequence Manifest	products: empty
LOPS-2548	Story	Closed	Leonid Garin	Update Sequencing Run Complete processing logic to query for the sequencer and flow cell id from RunDetails SDI Group	products: empty
LOPS-2545	Task	Closed	Mai Ton-Nu	Create list of reagent users and eqmt users	products: empty
LOPS-2501	Tweak	Closed	Andrei Smolkin	Update the Trackitem status	products: empty
LOPS-2477	Story	Closed	Lev Evstratov	Support "Pipeline Analysis Only" Assay Templates that may not have Test Methods added	products: empty
LOPS-2392	Story	Closed	Andrei Smolkin	Add Assay status, Assay Template type, and Disposition	products: empty
LOPS-2387	Story	Closed	Leonid Garin	The system shall have the ability to create assay instance records for control samples that are created off of QC Batch	products: empty
LOPS-2353	Task	Closed	Vasilii Sevriugin	Update Kafka Message Schemas for schema registry improvements and backwards compatibility	products: empty
LOPS-2327	Story	Closed	Vasilii Sevriugin	Validate selection of Reagent lot as Required on a QC Batch Control	products: empty
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	products: empty
LOPS-2163	Task	Closed	—	Create a read-only database account for QA environments	products: empty
LOPS-2123	Task	Closed	Matt Smith	Spike - Brain storm (design) to update the status of the sample based on ARM Message if samples are not processed by LOP	products: empty
LOPS-2118	Story	Closed	Valeria Vargas	Update Pool sample page to default Sample template and Natera barcode as Mandatory	products: invalid values ['Other']
LOPS-2046	Story	Closed	Vasiliy Kumaev	Support "Blind Scan" process for racks	products: empty
LOPS-2017	Tweak	Closed	Jonathan Quinn	Configure roles to Array related pages and update existing job types	products: empty
LOPS-1926	Story	Closed	Brandon Culver	Add data items and queries/filters to Trackitem tramstop	products: empty
LOPS-1488	Story	Closed	Mai Ton-Nu	Instrument work order group by Testing Department	products: empty
LOPS-1381	Task	Closed	Vasiliy Kumaev	Spike - Investigate and document plan for data mesh Assay Information Package delivery	products: invalid values ['Other']
LOPS-771	Task	Closed	Vasilii Sevriugin	JLogging Updates for SpringBoot	products: invalid values ['Signatera WES']
LOPS-643	Task	Closed	Leonid Garin	Demonstrate the ability to call an Action with restricted Web Request Security Policy selected and apply to existing aja	products: invalid values ['Horizon X']

LOPS Sprint 17 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2512	Defect	Verified	Vasiliy Kumaev	Save and Release array data entry throw exception.	products: invalid values ['Signatera WES']
LOPS-2447	Defect	Verified	Vasiliy Kumaev	Pipe results are not auto-approved with all the passing metrics	products: invalid values ['Other']
LOPS-2413	Defect	Verified	Matt Smith	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest. Exception: java.lang.Index	products: invalid values ['Other']
LOPS-2393	Story	Closed	Lev Evstratov	TextCustomSpecRule only supports Sample SDC	products: invalid values ['Signatera WES']
LOPS-2355	Task	Closed	Vasilii Sevriugin	Fix environment variable KAFKA_SCHEMA_REGISTRY_URL	products: empty
LOPS-2221	Story	Closed	Valeria Vargas	Update the sample list and manage test list page to filter samples by user's testing lab	products: empty
LOPS-2208	Story	Closed	Kevin Detweiler	The system shall have the departmental security defined on the required SDCs.	products: empty
LOPS-2190	Story	Closed	Vasiliy Kumaev	Validations and logic on the Accept and Accept Partial buttons to ensure users perform the correct actions during Quant	products: empty
LOPS-2159	Task	Closed	Mai Ton-Nu	Data cleanup for data import - Plan	products: empty
LOPS-2151	Story	Closed	Kevin Detweiler	Update all departments to have external flag set to N	products: empty
LOPS-2117	Tweak	Closed	Brandon Culver	Natera Barcodes for child samples are not being populated on the parent sample page	products: invalid values ['Other']
LOPS-2039	Tweak	Closed	Jonathan Quinn	Configure roles to Instrument (Equipment) related pages and add/update job types	products: empty
LOPS-2031	Story	Closed	Leonid Garin	Unable to filter CrossSDICalc in Arrays to only pull data from current Array Method Instance	products: invalid values ['Other']
LOPS-2018	Story	Closed	Kevin Detweiler	The system shall have Jobtypes and roles configured	products: empty
LOPS-2013	Story	Closed	Lev Evstratov	QC Batch Updates	products: empty
LOPS-2008	Tweak	Closed	Kevin Detweiler	The system shall have the following roles configured to Test pages	products: empty
LOPS-1974	Story	Closed	Lev Evstratov	The system shall update the sample look up page to remove sample templates from the list of samples	products: empty
LOPS-1898	Task	Closed	—	General support PSPC testing. Sprint 17	products: empty
LOPS-1586	Story	Closed	Lev Evstratov	Block assay dispositioning when there are active Holds associated	products: empty
LOPS-1484	Story	Closed	Mai Ton-Nu	Instrument queries	products: empty
LOPS-1483	Story	Closed	Jonathan Quinn	Create a method to record qualification status of instrument	products: empty
LOPS-1002	Task	Closed	Vasilii Sevriugin	Update Web Container Build Script to Fail on Takipi Errors	products: invalid values ['Signatera WES']
LOPS-960	Story	Closed	Vasilii Sevriugin	E-Signature Capture During Dataset Approval/Rejection	products: invalid values ['Signatera WES']
LOPS-837	Task	Closed	Ilya Savinov	Add Reagent Sync DB User to Docker Scripts and Config Server	products: invalid values ['Signatera WES']
LOPS-770	Task	Closed	Matt Smith	Review current OKTA configurations in springboot to ensure it works as expected and can be turned on	products: invalid values ['Signatera WES']
LOPS-648	Task	Closed	Valeria Vargas	Code Review Feedback for TransferExecutionDetail	products: invalid values ['Signatera WES']

LOPS Sprint 16 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2285	Defect	Closed	Brandon Culver	Pipe results processing fails: Assays not found for armguids	products: invalid values ['Other']
LOPS-2191	Story	Closed	Vasiliy Kumaev	Create policy that sets wells to "Rejected" when results fail during Array QC Review	products: empty
LOPS-2179	Story	Closed	Vasiliy Kumaev	Ability to associate the respective reagent container barcode to a control when we select the container for a control in	products: empty
LOPS-2154	Tweak	Closed	Lev Evstratov	Update WES metric profile	products: empty
LOPS-2153	Story	Closed	Lev Evstratov	Update Assay QC UI to show counts of number of assays pending disposition	products: empty
LOPS-2019	Story	Closed	Vasiliy Kumaev	Refactor the trigger for Assay "Completed" status	products: empty
LOPS-2012	Story	Closed	Lev Evstratov	Automatically add assay instance records to Incidents	products: empty
LOPS-1897	Task	Closed	—	General support PSPC testing. Sprint 16	products: empty
LOPS-1748	Story	Closed	Kevin Detweiler	The system shall have storage units types for Histopathology	products: invalid values ['Signatera WES']
LOPS-1657	Task	Closed	—	Spike - Investigate how to implement the ability to scan samples into a rack	products: empty
LOPS-1610	Tweak	Closed	Hani Yakan	The system shall assign all delete buttons to Admin role.	products: empty
LOPS-1598	Tweak	Closed	Brandon Culver	The system shall have the following roles configured to the Assay pages	products: empty
LOPS-843	Task	Closed	Vasilii Sevriugin	Make sure that API security is turned on and configured correctly for Kafka	products: invalid values ['Signatera WES']

LOPS Sprint 15 (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2175	Task	Closed	Brandon Culver	Investigate control error message preventing successful processing of pipeline done message	products: empty
LOPS-1888	Story	Closed	Lev Evstratov	Assay QC UI Updates	products: empty
LOPS-1887	Task	Closed	Vasilii Sevriugin	General support PSPC testing. Sprint 15	products: empty
LOPS-1865	Task	Closed	Leonid Garin	Part 1 - Refactor apply child sample plan to improve performance of bulk child sample creation	products: empty
LOPS-1779	Story	Closed	Leonid Garin	Provide a method for performing text validations within a parameter list	products: empty
LOPS-1596	Story	Closed	Brandon Culver	The system shall display required tram lines and tram stops on the LabAdmin site map	products: empty
LOPS-1589	Story	Closed	Chris Lott	The system shall display required tram lines and tram stops on the LIMS site map	products: empty
LOPS-1468	Story	Closed	Lev Evstratov	Allow Users to Refresh/Retrigger Assay Auto-Disposition Logic When Batches and Runs are Approved.	products: empty
LOPS-1406	Story	Closed	Vasiliy Kumaev	Update Assay QC UI and Processing to support metrics with errors instead of expected values	products: empty
LOPS-1379	Story	Closed	Chris Lott	The system shall have specific information populate on the result data entry page	products: invalid values ['Signatera WES']
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	products: invalid values ['Signatera WES']
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	products: invalid values ['Signatera WES']
LOPS-1025	Story	Closed	—	Gitlab Work	products: invalid values ['Signatera WES']
LOPS-1001	Task	Closed	Vasilii Sevriugin	Address Maven Build Failures	products: invalid values ['Signatera WES']
LOPS-959	Story	Closed	Vasiliy Kumaev	Pipeline Run Error Handling	products: invalid values ['Signatera WES']
LOPS-930	Story	Closed	Lev Evstratov	The system shall provide users with the the ability to log Incidents and indicate if a Hold on assay dispositioning is r	products: invalid values ['Signatera WES']
LOPS-918	Task	Closed	—	Create the functionality for IMT system level parameters	products: invalid values ['Signatera WES']
LOPS-799	Task	Closed	—	Review and Update all Design Documents and Specifications	products: invalid values ['Signatera WES']
LOPS-764	Task	Closed	Brandon Culver	Spike - Investigate how to ensure that an array well location with zero quantity can not be used	products: invalid values ['Signatera WES']
LOPS-690	Task	Closed	Brandon Culver	Spike - test loading trackitems into an array and then transferring expired trackitems	products: invalid values ['Signatera WES']
LOPS-288	Task	Closed	Vasilii Sevriugin	Address Code Review Comments for SequenceGenerator	products: invalid values ['Signatera WES']

LOPS Sprint 14 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2145	Task	Closed	Brandon Culver	Update seq barcodes for NovaSeqX: staging & e2e	products: empty
LOPS-2128	Defect	Verified	—	Pipe only seq manifest is not created: No Assay Template Workitems found	products: invalid values ['Other']
LOPS-2030	Task	Closed	—	Configure additional test controls for WES/X pipeline at integration env	products: invalid values ['Signatera WES']
LOPS-2029	Task	Closed	—	Configure additional test controls for WES/X pipeline at staging env	products: invalid values ['Signatera WES']
LOPS-1932	Story	Closed	Leonid Garin	New Assay is not displayed in Assay element on Sample maint/view when there are no workitems defined on the assay templa	products: invalid values ['Other']
LOPS-1889	Story	Closed	Leonid Garin	Remove Default Assay Template Logic for Filler Samples	products: empty
LOPS-1886	Task	Closed	Brandon Culver	Environment setup to support PSPC testing. Sprint 14	products: empty
LOPS-1885	Task	Closed	Ilya Savinov	Spike - Investigate and document plan for deployment of reagent sync objects	products: empty
LOPS-1874	Story	Closed	Vasiliy Kumaev	Assay Dispositioning Updates	products: empty
LOPS-1868	Defect	Closed	Mikhail Terpugov	Net Conc shouldn't be stored on Sample at Normalization	products: invalid values ['Signatera WES']
LOPS-1848	Story	Closed	Leonid Garin	Update Filler Sample Exclusion	products: empty
LOPS-1845	Defect	Verified	Brad Garrett	Extraction QC Review: parent sample doesn't have a hyperlink	products: invalid values ['Signatera WES']
LOPS-1835	Tweak	Verified	Chris Lott	When sample template is set to auto receive, the sample status created is Received.	products: empty
LOPS-1834	Defect	Closed	Mikhail Terpugov	Controls should be referred to as 'Blood Control' and 'NTC Control'	products: invalid values ['Signatera WES']
LOPS-1768	Task	Closed	Brad Garrett	Update RunLogPolicy and rundata processors to allow for multiple array layouts	products: invalid values ['Signatera WES']
LOPS-1746	Story	Closed	Meghana Joshi	Tissue Extraction 4 - Associate Sample Group with Control to Rack	products: invalid values ['Signatera WES']
LOPS-1708	Story	Closed	Meghana Joshi	Blood Extraction - Rundata: Verify Blood Samples Scheduled for Blood Extraction	products: invalid values ['Signatera WES']
LOPS-1679	Task	Closed	—	Platform part. Create hybrid assay templates for a new build deployment for the system test (SW e2e)	products: invalid values ['Signatera CLIA']
LOPS-1597	Story	Closed	Leonid Garin	The system shall have the ability to scan sample natera barcode on the sample file page	products: empty
LOPS-1584	Task	Closed	Brandon Culver	Formulations Test Method prototype	products: empty
LOPS-1517	Task	Closed	Vladimir Piyanov	LOPS running natively on arm64	products: empty
LOPS-1424	Task	Closed	Gianna Bell-Eunice	Export Pre-Capture Pooling array transfer method v2 from staging-572	products: invalid values ['Other']
LOPS-1355	Task	Closed	Vasiliy Kumaev	Create Devtools script for Pipe Results Message	products: invalid values ['Signatera WES']
LOPS-1273	Story	Closed	Mikhail Terpugov	Library QC Review - Create Library QC Review page with Approve Action for Library Plate	products: invalid values ['Signatera WES']
LOPS-1272	Story	Closed	Klead Fusha	Library QC - Create Blood Quant Plate-Level QC Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1271	Story	Closed	Klead Fusha	Library QC - Create Blood Sample / Control-Level Specification Master Data	products: invalid values ['Signatera WES']
LOPS-1269	Story	Closed	Klead Fusha	Library Quant - Create Concentration calculation Master Data	products: invalid values ['Signatera WES']
LOPS-1268	Story	Closed	Mikhail Terpugov	Library Quant - Create Results RunData Processor and master data	products: invalid values ['Signatera WES']
LOPS-1267	Story	Closed	Mikhail Terpugov	Library Quant - Create Plating RunData Processor and master data	products: invalid values ['Signatera WES']
LOPS-1249	Story	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - Create Tube-to-Rack Transfer Master Data	products: invalid values ['Signatera WES']
LOPS-1169	Task	Closed	—	Investigation: Unable to view audit trail for assay instance records	products: invalid values ['Signatera WES']
LOPS-1129	Story	Closed	Mikhail Terpugov	Normalization - Record rundata headers in SDI Group	products: invalid values ['Signatera WES']
LOPS-929	Story	Closed	Vasilii Sevriugin	The system shall provide a manual way to re-trigger a new Pipeline Launch Request for a sequencing run.	products: invalid values ['Signatera WES']
LOPS-784	Story	Closed	Brandon Culver	In-line QC - Use of unapproved lots	products: invalid values ['Signatera WES']
LOPS-697	Task	Closed	—	Provision Oracle Enterprise License	products: invalid values ['Signatera WES']
LOPS-620	Story	Closed	Lev Evstratov	Reagent Container barcodes	products: invalid values ['Signatera WES']

LOPS Sprint 13 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1925	Defect	Closed	—	Assay Templates do not have a way to indicate if an assay template is for filler samples	products: invalid values ['Other']
LOPS-1877	Tweak	Closed	Vasilii Sevriugin	Add SQE to schema registration pattern	products: invalid values ['Signatera WES']
LOPS-1864	Story	Closed	Klead Fusha	Tissue Extraction Workflow: Task-based approach to advance Sample Groups	products: invalid values ['Signatera WES']
LOPS-1860	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Plate with Control	products: invalid values ['Signatera WES']
LOPS-1814	Tweak	Verified	Vasilii Sevriugin	Technical Update to Support Schema registration on KEH 1.51 and up	products: invalid values ['Lab Selection Service (LSS)']
LOPS-1777	Defect	Closed	Leonid Garin	Retest from an array Manage Tests page: No rows found.	products: invalid values ['Other']
LOPS-1771	Story	Closed	Mikhail Makarin	Library Amplification - Record Rundata Headers	products: invalid values ['Signatera WES']
LOPS-1770	Story	Closed	Mikhail Makarin	Library Prep - Record Rundata Headers	products: invalid values ['Signatera WES']
LOPS-1769	Story	Closed	Mikhail Makarin	Extraction Quant - Record 'Plating' Rundata Headers	products: invalid values ['Signatera WES']
LOPS-1767	Sub-task	Closed	Michael Livingston	Import NR0542 into repository to support Deparaffinization configuration	products: empty
LOPS-1761	Task	Closed	—	Change configs for lwstaging-11 to point to the kafka deployed from Kubernetes	products: invalid values ['Other']
LOPS-1759	Defect	Closed	Mikhail Terpugov	After normalization rundata procesing sample data set not in Completed Status	products: invalid values ['Signatera WES']
LOPS-1757	Tweak	Closed	Vasilii Sevriugin	Add additional config to disable encryption for test environments	products: invalid values ['Signatera WES']
LOPS-1752	Tweak	Closed	Klead Fusha	Update Parameter list Pathologist Review FFPE Tissue/Variant: PRO-0014905	products: empty
LOPS-1751	Task	Closed	—	Record all Histopathology steps	products: invalid values ['Other']
LOPS-1738	Task	Closed	Vasiliy Kumaev	Exception Handling Refactoring	products: invalid values ['Signatera WES']
LOPS-1731	Task	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - SPIKE: Create Tube-to-Rack Transfer Master Data	products: invalid values ['Signatera WES']
LOPS-1723	Defect	Closed	Leonid Garin	LOPS - assay status doesn't change to 'inProgress' after creating a child sample	products: invalid values ['Signatera CLIA']
LOPS-1717	Defect	Closed	Alex Pakhunov	Unable to process raw quant output file from M200 instrument	products: invalid values ['Signatera WES']
LOPS-1712	Story	Closed	Mikhail Makarin	Blood Extraction - Store Rundata File as Attachment	products: invalid values ['Signatera WES']
LOPS-1707	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Include Controls	products: invalid values ['Signatera WES']
LOPS-1693	Defect	Closed	Leonid Garin	Fix Retest button on Manage Tests Pop Out window from the Assay Maint page	products: invalid values ['Other']
LOPS-1685	Story	Closed	Meghana Joshi	Tissue Extraction 7 > Tissue DNA Extraction - Create Plate	products: invalid values ['Signatera WES']
LOPS-1682	Story	Closed	Mikhail Makarin	The system shall display the associated Parent or Child information on the sample maintenance page.	products: empty
LOPS-1677	Story	Closed	Brandon Culver	Update jasper reports for run, batches, and samples	products: empty
LOPS-1634	Story	Closed	Meghana Joshi	Extraction QC Review - QC Review Page for Extraction QUANT Plate	products: invalid values ['Signatera WES']
LOPS-1632	Story	Closed	Lev Evstratov	Update Controls page in the Assay QC UI to support reworked controls and multi-use containers	products: empty
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	products: empty
LOPS-1609	Story	Closed	Leonid Garin	Support Assay instance creation for Filler samples	products: empty
LOPS-1592	Story	Closed	Vasiliy Kumaev	Add remaining buttons and functionality to Primer Design Assay QC UI	products: empty
LOPS-1588	Story	Closed	Chris Lott	Update manage test list page	products: empty
LOPS-1568	Story	Closed	Meghana Joshi	Test Only. Blood extraction Filter sample list page	products: invalid values ['Signatera WES']
LOPS-1567	Story	Closed	Brad Garrett	Fragmentation - Populate current date/time (Test only)	products: invalid values ['Signatera WES']
LOPS-1565	Story	Closed	Klead Fusha	Extraction quant - Expanded Calculated Concentration logic	products: invalid values ['Signatera WES']
LOPS-1514	Story	Closed	Lev Evstratov	Create Assay QC Paramlists for DAQ and WES Analysis and Primer Design	products: empty
LOPS-1507	Story	Closed	Leonid Garin	The system shall provide a way to configure the next Group Test Method to be assigned to the current sample.	products: empty
LOPS-1469	Story	Closed	Lev Evstratov	Display "Assays Pending Disposition" in the Assay QC UI	products: empty
LOPS-1436	Tweak	Closed	Mikhail Makarin	Remove the Retest Button on the Sample Maint Page	products: empty
LOPS-1396	Story	Closed	Vasiliy Kumaev	Assay QC Array Closure	products: empty
LOPS-1391	Story	Closed	Vasiliy Kumaev	Handle lineItemId updates from ARM	products: empty
LOPS-1266	Story	Closed	Mikhail Terpugov	Library Quant - Create Worklist	products: invalid values ['Signatera WES']
LOPS-1248	Story	Closed	Klead Fusha	Tissue Extraction 3 > Lysis and Decrosslinking - Create Run Details Master Data	products: invalid values ['Signatera WES']
LOPS-1247	Story	Closed	Michael Livingston	Tissue Extraction 2 > Deparaffinization - Select Sample Group, Record Run Details	products: invalid values ['Signatera WES']
LOPS-1246	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples v2	products: invalid values ['Signatera WES']
LOPS-1157	Story	Closed	Chris Lott	The system shall have the ability to search for one or more sample barcodes	products: invalid values ['Signatera WES']
LOPS-1111	Story	Closed	Michael Livingston	WES: Tissue Extraction - Sample Group Page Format	products: invalid values ['Signatera WES']

LOPS Sprint 12 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1861	Defect	Closed	Vasilii Sevriugin	Statuses are available for selection when no plates having such statuses are present in the system	products: invalid values ['Signatera WES']
LOPS-1843	Defect	Closed	Chris Lott	Search Queries are duplicated at Samples - Review page	products: invalid values ['Signatera WES']
LOPS-1734	Tweak	Closed	Brad Garrett	Remove Lock Attachment Popup - Worklist	products: invalid values ['Signatera WES']
LOPS-1716	Task	Closed	Alex Pakhunov	Investigate solution to process M200 raw quant output file	products: invalid values ['Signatera WES']
LOPS-1683	Task	Closed	Michael Livingston	AQC Batch Spike	products: empty
LOPS-1619	Task	Closed	Klead Fusha	Update Histopathology Test Method Description	products: invalid values ['Signatera WES']
LOPS-1614	Story	Closed	Mikhail Terpugov	Normalization - Validate Controls (Blood Plate)	products: invalid values ['Signatera WES']
LOPS-1611	Tweak	Opened	Meghana Joshi	We should not save run log headers in blood extraction array zone	products: empty
LOPS-1608	Tweak	Verified	Matt Smith	Move Child Sample Flag Field Check to Event Plan	products: empty
LOPS-1492	Story	Closed	Michael Livingston	Tissue Extraction 4 - Create Tissue Rack	products: invalid values ['Signatera WES']
LOPS-1478	Story	Closed	Michael Livingston	Create Rack List Page	products: invalid values ['Signatera WES']
LOPS-1477	Story	Closed	Lev Evstratov	Update Assay QC UI to support reworked samples and arrays	products: empty
LOPS-1408	Story	Closed	Vasiliy Kumaev	Update Pipe Results Message Schema to v1.1	products: empty
LOPS-1404	Story	Closed	Brandon Culver	Update Assay QC UI to support Pipeline Analysis Only Assays where Pipe Results are only on Run Level	products: empty
LOPS-1254	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Rundata Processor	products: invalid values ['Signatera WES']
LOPS-1253	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Exclude Controls	products: invalid values ['Signatera WES']
LOPS-1234	Story	Closed	Mikhail Terpugov	Normalization - Create rundata processor, plates for Blood plates	products: invalid values ['Signatera WES']
LOPS-1152	Story	Closed	Vasilii Sevriugin	The system shall have the ability to decrypt information from the Accessioning Message	products: invalid values ['Signatera WES']
LOPS-1137	Story	Closed	Vasiliy Kumaev	The system shall provide a way for users to Disposition assays from the Assay QC UI.	products: invalid values ['Signatera WES']
LOPS-1126	Story	Closed	Brad Garrett	Extraction QC Review - Create Extraction QC Review Page with Approve Action for Extraction Plate	products: invalid values ['Signatera WES']
LOPS-1109	Story	Closed	Brad Garrett	Tissue Extraction 7 > Tissue DNA Extraction - Run Details	products: invalid values ['Signatera WES']
LOPS-1055	Story	Closed	Leonid Garin	Create a streamlined process for allowing users to rework samples from an array	products: invalid values ['Signatera WES']
LOPS-1022	Story	Closed	Lev Evstratov	Add DAQ Pipe Job IDs to the Primer Design Pipe Launch Request	products: invalid values ['Signatera WES']
LOPS-958	Story	Closed	Vasilii Sevriugin	Assay QC Review Queues	products: invalid values ['Signatera WES']
LOPS-894	Task	Closed	—	Performance Investigation - Accessioning Message Processing	products: invalid values ['Signatera WES']
LOPS-674	Task	Closed	Matt Smith	Create Confluence page with instructions on setting up local and shared dev environments for LOPS	products: invalid values ['Signatera WES']

LOPS Sprint 11 (39 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1636	Defect	Closed	Leonid Garin	Workitem e-sig data is not recorded into Database	products: invalid values ['Other']
LOPS-1613	Defect	Ready for SQA	—	Fix errors in test methods	products: invalid values ['Signatera CLIA']
LOPS-1601	Story	Closed	Brad Garrett	Update to allow results to be promoted a 2nd time	products: invalid values ['Signatera WES']
LOPS-1600	Task	Closed	Alex Pakhunov	Script to generate runlogs	products: invalid values ['Signatera WES']
LOPS-1593	Task	Closed	Vladimir Piyanov	Create dedicated rancher staging environment for IAP	products: invalid values ['Horizon X']
LOPS-1590	Tweak	Closed	Klead Fusha	Add NAT-800316 to LOPS Repository	products: empty
LOPS-1587	Task	Closed	—	LOPS - assay status changes to "completed" instead of "in progress"	products: invalid values ['Signatera CLIA']
LOPS-1577	Task	Closed	Matt Smith	Export Existing Platform Data for Repository	products: empty
LOPS-1573	Task	Closed	Vasiliy Kumaev	Fail processing transaction when NtrException is thrown	products: invalid values ['Other']
LOPS-1570	Sub-task	Closed	Vasiliy Kumaev	Please add Pipe Job ID and Pipe Job Status params to WES Primer Design array method	products: invalid values ['Other']
LOPS-1518	Task	Closed	Brad Garrett	WES on X Demo prep	products: empty
LOPS-1505	Task	Closed	—	LOPS does not generate WES extraction kafka message for EDTA samples (events.labops.workflow.status.v1)	products: invalid values ['Signatera CLIA']
LOPS-1448	Story	Closed	Brad Garrett	Run Details Manual Data Entry	products: invalid values ['Signatera WES']
LOPS-1445	Tweak	Closed	Klead Fusha	Update Histology sample templates to contain Quantity, Units and Container type.	products: invalid values ['Signatera WES']
LOPS-1423	Task	Closed	Mikhail Makarin	Please set up Sequencing array methods	products: invalid values ['Other']
LOPS-1421	Story	Closed	Meghana Joshi	Blood Extraction - Create child sample via rundata processing	products: invalid values ['Signatera WES']
LOPS-1397	Task	Closed	Mikhail Terpugov	Review OOB QC Review page to determine if it can be used as is	products: empty
LOPS-1395	Story	Closed	Vasiliy Kumaev	Record Pipe Job ID and and status from Pipe Results Message on the Array Method	products: empty
LOPS-1385	Tweak	Closed	Klead Fusha	Update Test for PRO-0014905 Pathologist Review FFPE Tissue	products: invalid values ['Signatera WES']
LOPS-1378	Story	Closed	Brad Garrett	Blood Extraction - sdi group for capturing rundetails	products: invalid values ['Signatera WES']
LOPS-1357	Story	Closed	Chris Lott	The system shall display associated assay instance records on the sample maint and view pages.	products: invalid values ['Signatera WES']
LOPS-1354	Task	Closed	Vasilii Sevriugin	Implement changes required to support message compression in the Pipe Results topic	products: invalid values ['Signatera WES']
LOPS-1348	Tweak	Closed	Vasilii Sevriugin	Implement changes to all kafka message processing to generate the correct key in the header	products: invalid values ['Signatera WES']
LOPS-1245	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples > Select samples	products: invalid values ['Signatera WES']
LOPS-1237	Story	Closed	Brad Garrett	Record Fragmentation Run Details	products: invalid values ['Signatera WES']
LOPS-1226	Story	Closed	Mikhail Terpugov	Normalization - Create Worklist processor	products: invalid values ['Signatera WES']
LOPS-1186	Story	Closed	Lev Evstratov	Update Samples List page on the Assay QC UI to include Assay information	products: invalid values ['Signatera WES']
LOPS-1176	Story	Closed	Brad Garrett	Extraction QC - Create Blood Quant Plate Specification	products: invalid values ['Signatera WES']
LOPS-1139	Story	Closed	Klead Fusha	The system shall have Histopathology testing in an Assay Template	products: invalid values ['Signatera WES']
LOPS-1121	Story	Closed	Brad Garrett	Extraction Quant QC - Create Blood Sample/control Specifications	products: invalid values ['Signatera WES']
LOPS-1119	Story	Closed	Michael Livingston	Create Concentration Calculation for Extraction Quant	products: invalid values ['Signatera WES']
LOPS-1110	Story	Closed	Meghana Joshi	Blood Extraction - Build action for qc batch to store rundata headers	products: invalid values ['Signatera WES']
LOPS-1104	Tweak	Closed	Klead Fusha	Import remaining Product config data(sample types, container types, uom) into LOPS repository	products: invalid values ['Signatera WES']
LOPS-1097	Story	Closed	Chris Lott	The system shall provide users with a manual way to Fail an Assay prior to Assay QC	products: invalid values ['Signatera WES']
LOPS-1088	Story	Closed	Brandon Culver	Update Assay QC UI to support review of control results	products: invalid values ['Signatera WES']
LOPS-956	Story	Closed	Leonid Garin	Workitem Re-Testing in Bulk	products: invalid values ['Signatera WES']
LOPS-944	Story	Closed	Vasiliy Kumaev	Automated disposition of Assays during processing of the Pipe Results message	products: invalid values ['Signatera WES']
LOPS-844	Tweak	Closed	Klead Fusha	Import Product config Sites data into LOPS repository	products: invalid values ['Signatera WES']
LOPS-760	Story	Closed	Vasiliy Kumaev	When the system parses the sample accessioning messages, the Request and samples will be created along with required dat	products: empty

LOPS Sprint 10 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1581	Sub-task	Closed	Michael Livingston	Remove "InstrumentID" field from "Wes Library Amplification" section on Data Entry	products: empty
LOPS-1447	Story	Closed	Brad Garrett	Child pages for run detail implementation of SDI Groups	products: invalid values ['Signatera WES']
LOPS-1446	Task	Closed	Matt Smith	Child sample is not created using Actions	products: invalid values ['Signatera CLIA']
LOPS-1428	Sub-task	Closed	Meghana Joshi	Add support for data entry dest plate array params	products: empty
LOPS-1422	Task	Closed	Matt Smith	Update SQE_Generic_TM_02 TM and Assay Template	products: invalid values ['Other']
LOPS-1412	Story	Closed	Meghana Joshi	Updates / Build for Blood Extraction Results Review	products: invalid values ['Signatera WES']
LOPS-1410	Task	Closed	Matt Smith	Blood gDNA is not created	products: invalid values ['Signatera CLIA']
LOPS-1401	Story	Closed	Brad Garrett	Implement SDI Group page for manual data entry of run details	products: invalid values ['Signatera WES']
LOPS-1400	Tweak	Closed	Chris Lott	There is a missing action prompt when creating multiple samples on Add Child Sample Page	products: empty
LOPS-1321	Tweak	Verified	Lev Evstratov	Import Equipment Models into LOPS Repository	products: invalid values ['Signatera WES']
LOPS-1320	Tweak	Verified	Lev Evstratov	Import Equipment Types into LOPS Repository	products: invalid values ['Signatera WES']
LOPS-1264	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required	products: invalid values ['Signatera WES']
LOPS-1263	Story	Closed	Michael Livingston	Library Amplification - Create Worklist processor	products: invalid values ['Signatera WES']
LOPS-1261	Story	Closed	Meghana Joshi	Blood Extraction Quant - Create RunData Results Processor	products: invalid values ['Signatera WES']
LOPS-1243	Story	Closed	Vasilii Sevriugin	When the child sample is created by and a sample template is chosen, specific data shall be copied to the sample from th	products: invalid values ['Signatera WES']
LOPS-1239	Story	Closed	Michael Livingston	Library Prep - Create Rundata Processor and master data	products: invalid values ['Signatera WES']
LOPS-1238	Story	Closed	Michael Livingston	Library Prep - Create worklist processor button	products: invalid values ['Signatera WES']
LOPS-1155	Story	Closed	Leonid Garin	Update Pipe Launch Request to Use Real Tumor Purity Value	products: invalid values ['Signatera WES']
LOPS-1149	Tweak	Closed	Leonid Garin	The system shall have the ability to define the disposal statuses	products: invalid values ['Signatera WES']
LOPS-1095	Story	Closed	Leonid Garin	Update Assay Dispositioned Status Messages to support "XCPT-00001" logic and requirements	products: invalid values ['Signatera WES']
LOPS-1057	Story	Closed	Vasiliy Kumaev	Auto-approvals for datasets on the run and batch levels	products: invalid values ['Signatera WES']
LOPS-1033	Story	Closed	Mikhail Terpugov	The system shall have the ability to add a retest and have it associated to the assay instance	products: invalid values ['Signatera WES']
LOPS-974	Story	Closed	Leonid Garin	Exclude filler samples and cancelled samples from the pipeline launch request	products: invalid values ['Signatera WES']
LOPS-818	Tweak	Closed	Brandon Culver	The system shall display a free-text field for users to enter in notes for a dataset during QC Review.	products: invalid values ['Signatera WES']
LOPS-814	Story	Closed	Vasiliy Kumaev	When a child sample is created, testing is assigned from the assay template	products: invalid values ['Signatera WES']
LOPS-737	Story	Closed	Lev Evstratov	Update ARM Message Processing for "WES Analysis and Primer Design Assay"	products: invalid values ['Signatera WES']

LOPS Sprint 09 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1403	Task	Closed	Brandon Culver	Investigate and fix child sample issues in gsp integration env	products: empty
LOPS-1358	Tweak	Closed	Meghana Joshi	Update assay template ngs-wes-normal-blood-somatic-v3 to populate sample type, container type, and sample template	products: invalid values ['Signatera WES']
LOPS-1347	Task	Closed	—	SW e2e support	products: invalid values ['Other']
LOPS-1343	Tweak	Closed	Brandon Culver	Resolve Errors in Assay QC Web Pages	products: empty
LOPS-1342	Tweak	Closed	Brandon Culver	Update Pipe Results message processing to handle controlMetrics object in batches array	products: empty
LOPS-1341	Tweak	Closed	Brandon Culver	Update Pipe Results Message Processing to fix metric profile and paramlist variant lookups	products: invalid values ['Signatera WES']
LOPS-1327	Story	Closed	Meghana Joshi	Blood Extraction Quant - Update to plating for Standards	products: invalid values ['Signatera WES']
LOPS-1324	Story	Closed	Brad Garrett	Blood Extraction - Worklist generation and runlog upload	products: invalid values ['Signatera WES']
LOPS-1323	Sub-task	Closed	Matt Smith	Update Container Type SDC Export Script	products: invalid values ['Signatera WES']
LOPS-1299	Task	Closed	—	KEH k8s configuration for staging-572	products: empty
LOPS-1244	Sub-task	Closed	Matt Smith	Fix Test Method Export Script and Existing Exports	products: invalid values ['Signatera WES']
LOPS-1235	Tweak	Closed	Michael Livingston	Blood Extraction - Create a method for handling creation of child dna samples	products: invalid values ['Signatera WES']
LOPS-1230	Story	Closed	Brad Garrett	Implement QC Batch UI and RunDetails objects	products: invalid values ['Signatera WES']
LOPS-1217	Task	Closed	Brad Garrett	Spike - Investigate how to create child DNA samples	products: invalid values ['Signatera WES']
LOPS-1187	Task	Closed	Brad Garrett	Update Assay QC Paramlists for sw e2e	products: empty
LOPS-1185	Story	Closed	Chris Lott	Add "Manage Tests" button to the Workitems element on the Assay Instance Maint page	products: invalid values ['Signatera WES']
LOPS-1180	Tweak	Closed	Lev Evstratov	Update Exceptions Code List based on Product Config	products: invalid values ['Signatera WES']
LOPS-1174	Tweak	Closed	Meghana Joshi	Consolidate duplicate master data for Blood Extraction	products: invalid values ['Signatera WES']
LOPS-1168	Story	Closed	Vasilii Sevriugin	Implement a byte array serializer	products: invalid values ['Signatera WES']
LOPS-1167	Story	Closed	Lev Evstratov	The system shall display required tram lines and tram stops on the LIMS site map	products: invalid values ['Signatera WES']
LOPS-1165	Tweak	Closed	Lev Evstratov	Update Germline and Somatic Sample Template Description	products: invalid values ['Signatera WES']
LOPS-1164	Story	Closed	Leonid Garin	The system shall display required tram lines and tram stops on the Lab Admin site map	products: invalid values ['Signatera WES']
LOPS-1163	Story	Closed	Lev Evstratov	The system shall have the required Job types configured	products: invalid values ['Signatera WES']
LOPS-1156	Story	Closed	Leonid Garin	The system shall have the ability to display the associated trackitem information on the sample	products: invalid values ['Signatera WES']
LOPS-1150	Task	Closed	Meghana Joshi	Spike Task: Investigate if transfer execution detail can be utilized for rgnt/eqp at Blood Extractions	products: invalid values ['Signatera WES']
LOPS-1135	Story	Closed	Vasiliy Kumaev	When an assay is first assigned to a sample and the new assay instance record is generated, the system shall apply appro	products: invalid values ['Signatera WES']
LOPS-1132	Task	Closed	Vasilii Sevriugin	DLQ/Bypass/log for invalid messages	products: invalid values ['Signatera WES']
LOPS-1117	Story	Closed	Brad Garrett	Add Extraction Quant Worklist Generator and Quant Plating RunData Upload buttons to the ArrayList page	products: invalid values ['Signatera WES']
LOPS-1090	Task	Closed	Vasilii Sevriugin	Spike - Download Oracle Enterprise and document steps for install	products: invalid values ['Signatera WES']
LOPS-1087	Story	Closed	Brandon Culver	Update Pipe Results Message Processing to Support Controls	products: invalid values ['Signatera WES']
LOPS-1085	Tweak	Closed	Lev Evstratov	The system shall have the following Sample templates for Histopathology Processing	products: invalid values ['Signatera WES']
LOPS-1083	Tweak	Closed	Lev Evstratov	The system shall have a Group Test method for processing HE Stain Slides in Austin	products: invalid values ['Signatera WES']
LOPS-1082	Tweak	Closed	Lev Evstratov	The system shall have a Group test method for Block Processing in Austin	products: invalid values ['Signatera WES']
LOPS-1071	Tweak	Closed	Michael Livingston	The system shall have Histology Specimen Verification testing for Austin	products: invalid values ['Signatera WES']
LOPS-1070	Tweak	Closed	Lev Evstratov	The system shall have Histology Autostainer Operation testing for Austin	products: invalid values ['Signatera WES']
LOPS-1053	Task	Closed	Vasiliy Kumaev	Setup Integration Tests	products: invalid values ['Signatera WES']
LOPS-910	Task	Closed	Matt Smith	Update Patch Validation Script to Fail on Error	products: invalid values ['Signatera WES']
LOPS-908	Story	Closed	Vasiliy Kumaev	Automated Assay Cancellation	products: invalid values ['Signatera WES']
LOPS-907	Story	Closed	Meghana Joshi	Extraction Quant - Create the workflow task and master data for import of the rundata	products: invalid values ['Signatera WES']
LOPS-905	Task	Closed	Brad Garrett	Spike - Investigate and document a design plan for QC Batches / Rundetail	products: invalid values ['Signatera WES']
LOPS-869	Story	Closed	Lev Evstratov	Update Manual Assay Cancellation Functionality to Set Assay Disposition to "Cancelled"	products: invalid values ['Signatera WES']
LOPS-862	Task	Closed	—	Spike - Create design for how to streamline retesting	products: invalid values ['Signatera WES']
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	products: invalid values ['Signatera WES']
LOPS-762	Task	Closed	Vasilii Sevriugin	update gitlab pipeline to automatically up version the custom jar	products: invalid values ['Signatera WES']
LOPS-580	Sub-task	Closed	—	Spike - Create design plan for how we will be able to record QC metrics from pipelines on standards and controls on arra	products: empty
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	products: empty

LOPS Sprint 08 (29 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1296	Task	Closed	—	Pipeline - LOPS integration: results investigation	products: invalid values ['Other']
LOPS-1183	Story	Closed	Michael Livingston	Update array methods with new parameter - RunDataEntered	products: invalid values ['Signatera WES']
LOPS-1181	Task	Closed	Vasilii Sevriugin	Investigate issues with Pipe Results message and coordinate with Pipelines for testing and fix	products: empty
LOPS-1162	Task	Closed	—	LOPS jama wes on x test cases reorg for the systems testing team	products: invalid values ['Other']
LOPS-1161	Task	Closed	Matt Smith	Update custom action to OOTB Action for creating child samples from child sample plan	products: empty
LOPS-1136	Tweak	Verified	Michael Livingston	LOPS - doesn't support measurement: "UOM-00001" and other values (events.accessioning.sample.info.v1)	products: invalid values ['Signatera CLIA']
LOPS-1133	Task	Closed	Vasilii Sevriugin	Implement changes to support KEH migration to Kubernetes	products: invalid values ['Signatera WES']
LOPS-1123	Story	Closed	Vasiliy Kumaev	The system shall provide the ability to promote results from an array method to sample datasets even when there are mul	products: invalid values ['Signatera WES']
LOPS-1092	Task	Closed	Vasilii Sevriugin	Spike - Impact assessment on Kubernetes / Kafka transition	products: invalid values ['Signatera WES']
LOPS-1091	Task	Closed	Vasilii Sevriugin	Add labels to docker images in infrastructure repo	products: invalid values ['Signatera WES']
LOPS-1084	Story	Closed	Lev Evstratov	Add way to configure "Point of No Return" on the assay template	products: invalid values ['Signatera WES']
LOPS-1073	Task	Closed	Brad Garrett	Create Assay QC Paramlists for SW E2E	products: empty
LOPS-1072	Tweak	Closed	Michael Livingston	The system shall have Anatomic Pathologist Review of Formalin Fixed Paraffin Embedded (FFPE) Tissue testing	products: invalid values ['Signatera WES']
LOPS-1069	Tweak	Closed	Michael Livingston	The system shall have Histology Macrodissection testing for Austin	products: invalid values ['Signatera WES']
LOPS-1068	Tweak	Closed	Michael Livingston	The system shall have Histology Embedding testing for Austin	products: invalid values ['Signatera WES']
LOPS-1067	Tweak	Closed	Michael Livingston	The system shall have testing for Histology Microtomy for Austin	products: invalid values ['Signatera WES']
LOPS-1058	Story	Closed	Brandon Culver	Support QC Metrics where the metric name has >40 characters	products: invalid values ['Signatera WES']
LOPS-1032	Story	Closed	Chris Lott	The system shall display specific information on the Manage Test list page	products: invalid values ['Signatera WES']
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	products: invalid values ['Signatera WES']
LOPS-906	Story	Closed	Meghana Joshi	Create quantification workflow task for download of samples eligible for quantification to a file	products: invalid values ['Signatera WES']
LOPS-904	Story	Closed	Meghana Joshi	Create workflow task for upload of WES blood extraction rundata log and transfer to array	products: invalid values ['Signatera WES']
LOPS-893	Task	Closed	Brad Garrett	Review Automated data approval for Array Zones following latest 8.8 patchsets application	products: invalid values ['Signatera WES']
LOPS-883	Tweak	Closed	Michael Livingston	Create a query for the array page "By array method"	products: invalid values ['Signatera WES']
LOPS-866	Tweak	Closed	Chris Lott	The sample genealogy page shall display specific sample information	products: invalid values ['Signatera WES']
LOPS-845	Task	Closed	Michael Livingston	Import Product config Products and Assay data into LOPS repository	products: invalid values ['Signatera WES']
LOPS-816	Story	Closed	Vasilii Sevriugin	When the sample is created as a child sample, the system shall define the testing lab and site from the parent sample	products: invalid values ['Signatera WES']
LOPS-815	Story	Closed	Chris Lott	The system shall have the ability to define the Natera barcode when creating multiple children samples	products: invalid values ['Signatera WES']
LOPS-809	Story	Closed	Brandon Culver	When a user receives the sample, the system shall define the testing lab and site from the user	products: invalid values ['Signatera WES']
LOPS-602	Story	Closed	Chris Lott	Update Event Plan to Use Correct Child Sample Plan Code	products: invalid values ['Other']

LOPS Sprint 07 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1116	Task	Closed	—	Deploy qa-86 kafka-event-hub to k8s	products: invalid values ['Other']
LOPS-1081	Tweak	Closed	Michael Livingston	Update Array Method WESTissueExtraction	products: empty
LOPS-1079	Tweak	Closed	Michael Livingston	Update Test Methods for Software E2E	products: empty
LOPS-1078	Tweak	Closed	Michael Livingston	Update Transaction Type for Software E2E	products: empty
LOPS-1077	Task	Closed	Vasilii Sevriugin	Update topic names for transaction types to append .v1	products: empty
LOPS-1076	Task	Closed	—	Confirm all topic names for transaction types have ".v1" appended	products: empty
LOPS-1056	Task	Closed	—	Assess if LV patch resolves the bug that prevents auto-approvals for run and batch level datasets	products: invalid values ['Signatera WES']
LOPS-1049	Task	Closed	Vasilii Sevriugin	Coordinate with ARM on path forward for assay request message schema	products: empty
LOPS-1043	Task	Closed	Vasilii Sevriugin	Update Intf Service to Use New Kafka POJO Schemas	products: empty
LOPS-1042	Task	Closed	Brad Garrett	Prep for On-Site	products: invalid values ['Signatera WES']
LOPS-913	Tweak	Closed	Michael Livingston	Create array methods and child sample plan for WES Tissue DNA Extraction	products: invalid values ['Signatera WES']
LOPS-903	Story	Closed	Meghana Joshi	Create workflow task for download of samples eligible for extraction to a file	products: invalid values ['Signatera WES']
LOPS-886	Story	Closed	Michael Livingston	Create array method and transfer method for WES Library Amplification plate	products: invalid values ['Signatera WES']
LOPS-860	Task	Closed	Mikhail Novokshchenov	LIMS to LOPS/PIPE integration - EDTA/tissue workflow + assay QC for samples	products: invalid values ['Signatera WES']
LOPS-832	Tweak	Closed	Michael Livingston	Sample type, arraymethod updates for Software E2E	products: invalid values ['Signatera WES']
LOPS-772	Task	Closed	Vasilii Sevriugin	Spike - Investigate and document a strategy for handling versioning of the custom jar	products: invalid values ['Signatera WES']
LOPS-633	Story	Verified	Vasilii Sevriugin	Update ARM Message Processing to support v1.16 of the schema	products: invalid values ['Signatera WES']

LOPS Sprint 06 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1046	Task	Closed	—	E2E Dry Run Testing	products: empty
LOPS-1014	Story	Verified	Vasiliy Kumaev	Implement changes required to ensure the Pipe Launch Request uses the correct Flow Cell ID	products: empty
LOPS-1005	Task	Closed	Matt Smith	Create a LOPS system instance for users to have hands on testing and practice	products: empty
LOPS-963	Story	Closed	Vasiliy Kumaev	The system shall display associated assay instance records on the sample maint and view pages.	products: invalid values ['Signatera WES']
LOPS-951	Story	Verified	Vasiliy Kumaev	Implement changes to support manual data entry for the flow cell ID when setting up the sequencing run	products: empty
LOPS-917	Task	Closed	Vasilii Sevriugin	Add datadog to Kafka sprintboot service	products: invalid values ['Signatera WES']
LOPS-915	Story	Closed	Brandon Culver	Update the trackitem DB Trigger for UUID	products: invalid values ['Signatera WES']
LOPS-914	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	products: invalid values ['Signatera WES']
LOPS-900	Story	Closed	Brandon Culver	The system shall have the ability to define an Assay	products: invalid values ['Signatera WES']
LOPS-899	Tweak	Closed	Brandon Culver	Spike - Create Design plan for refactoring sequencing run flow cell setup	products: empty
LOPS-897	Task	Closed	Vasilii Sevriugin	Import schemas from Swaggerhub for topics that LOPS consumes from	products: empty
LOPS-888	Story	Closed	Meghana Joshi	Create Test Method "WES Capture PCR Cleanup"	products: empty
LOPS-871	Task	Closed	Matt Smith	Create Read-Only DB User for GSP Launch Team	products: invalid values ['Signatera WES']
LOPS-864	Task	Closed	Brad Garrett	Spike - Create design plan for setting up any necessary arrays automatically for pipeline only assays	products: empty
LOPS-848	Task	Closed	Vasilii Sevriugin	Update LOPS LabVantage to PatchSet 8.8.0.10 Version	products: invalid values ['Signatera WES']
LOPS-807	Task	Closed	Matt Smith	Assess which requirements and specifications are impacted by the switch from intf service to springboot	products: empty
LOPS-778	Task	Closed	Mai Ton-Nu	Product config Container types and units gap analysis	products: invalid values ['Signatera WES']
LOPS-773	Task	Closed	Brandon Culver	Configure Jasper for use on LabVantage 8.8	products: invalid values ['Signatera WES']

LOPS Sprint 05 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-942	Sub-task	Closed	—	WES Pre-Capture Pooling Param List - 'Sample Type' parameter is missing	products: invalid values ['Signatera WES']
LOPS-916	Task	Closed	—	Fix broken web image in LOPS-MVP-5 branch	products: invalid values ['Other']
LOPS-912	Tweak	Verified	Michael Livingston	Create Test method and parameter list for "WES Tissue DNA Extraction:	products: invalid values ['Signatera WES']
LOPS-895	Tweak	Verified	Michael Livingston	Create Assay Request and pipeline code information for WES on X	products: invalid values ['Signatera WES']
LOPS-891	Story	Closed	Michael Livingston	Update array method "WES Sequencing" to include flow cell id and instrument id	products: invalid values ['Signatera WES']
LOPS-890	Story	Closed	Michael Livingston	Create transfer method "WES Sequencing Prep Transfer"	products: invalid values ['Signatera WES']
LOPS-889	Story	Closed	Michael Livingston	Create transfer method and array method for WES Capture PCR Cleanup plate	products: empty
LOPS-887	Story	Closed	Michael Livingston	Create array method and transfer method for WES Pre-Capture Pooling Plate	products: invalid values ['Signatera WES']
LOPS-885	Story	Verified	Michael Livingston	Create Test Methods for WES PreCapture Pooling	products: invalid values ['Signatera WES']
LOPS-884	Story	Verified	Michael Livingston	Create Test Methods for WES Library Amplification	products: invalid values ['Signatera WES']
LOPS-882	Story	Verified	Michael Livingston	Create Array method and array layout for Blood extraction plate	products: invalid values ['Signatera WES']
LOPS-881	Tweak	Verified	Michael Livingston	Create a query for the sample page "by test method"	products: invalid values ['Signatera WES']
LOPS-878	Story	Closed	Michael Livingston	Create Test Methods for Sig WES Downstream	products: invalid values ['Signatera WES']
LOPS-873	Task	Closed	Brad Garrett	Prep for Assay QC Demo to CLS	products: empty
LOPS-872	Story	Closed	Brad Garrett	Update Pipeline Results Message processing to support Pipeline Analysis Only assays and upversion to v0.6	products: empty
LOPS-867	Story	Closed	Vasiliy Kumaev	When the child sample is created and a sample template is chosen, specific data shall be copied to the sample from the s	products: empty
LOPS-865	Story	Closed	Vasiliy Kumaev	Update Assay Request Message Processing	products: empty
LOPS-857	Story	Verified	Michael Livingston	Create Array Templates and Test Methods for Sig WES Blood Extraction	products: invalid values ['Signatera WES']
LOPS-854	Task	Closed	Vasilii Sevriugin	[Pipe Results] Implement changes needed to consume from the topic with schema registration enabled	products: empty
LOPS-853	Task	Closed	Vasilii Sevriugin	[Sequencing Run Complete] Implement changes needed to consume from the topic with schema registration enabled	products: empty
LOPS-852	Task	Closed	Vasilii Sevriugin	[ARM] Implement changes needed to consume from the topic with schema registration enabled	products: empty
LOPS-851	Task	Closed	Vasilii Sevriugin	[Accessioning] Implement changes needed to consume from the topic with schema registration enabled	products: empty
LOPS-850	Task	Closed	Vasilii Sevriugin	Implement updates needed to support consuming Kafka messages with schema registration enabled	products: empty
LOPS-846	Task	Closed	Vasilii Sevriugin	Update Kafka UI to use the LOPS Kafka User	products: empty
LOPS-840	Task	Closed	Matt Smith	Add code owners to infrastructure repository	products: invalid values ['Signatera WES']
LOPS-834	Task	Closed	Vasilii Sevriugin	Update topics for all Kafka messages to include version	products: empty
LOPS-831	Story	Closed	Brandon Culver	Controls in the pipe launch request	products: empty
LOPS-826	Story	Closed	Meghana Joshi	The system shall produce a Sample Event Kafka Message in JSON format that contains the required information for the samp	products: empty
LOPS-811	Tweak	Closed	Brandon Culver	The system shall have the ability to display the associated trackitem information on the sample	products: empty
LOPS-810	Tweak	Closed	Chris Lott	The sample notes shall always display on sample maintenance pages	products: empty
LOPS-803	Task	Closed	Vasilii Sevriugin	Add Kafka schemas to GitLab	products: empty
LOPS-802	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	products: empty
LOPS-801	Story	Closed	Brad Garrett	The system shall provide a way for users to view and approve/reject run, batch, and sample level results that are recor	products: empty
LOPS-790	Story	Closed	Chris Lott	The system shall have the departmental security defined on the required SDCs.	products: empty
LOPS-733	Story	Closed	Vasiliy Kumaev	When an assay disposition is updated to "Passed", "Failed", or "Cancelled", the system shall produce a message in JSON	products: empty
LOPS-685	Task	Closed	Matt Smith	Configure gitlab pipeline to allow deployments from conductor	products: invalid values ['Signatera WES']

LOPS Sprint 04 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-859	Story	Closed	Brandon Culver	The system shall generate unique IDs in UUID format on trackitems for reagents.	products: empty
LOPS-855	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	products: empty
LOPS-839	Sub-task	Closed	Vasiliy Kumaev	Configure Master Data: Exception Codes	products: empty
LOPS-838	Story	Verified	Vasiliy Kumaev	The system shall have the ability to generate Exceptions.	products: empty
LOPS-835	Task	Closed	Brandon Culver	Import Sig WES Reagent types into LOPS Repo	products: empty
LOPS-828	Story	Closed	Michael Livingston	The system shall provide a way to define the control sample type for controls reported in the Pipeline Launch Request.	products: empty
LOPS-821	Story	Verified	Vasiliy Kumaev	The system shall allow users to associate an Exception with an assay instance.	products: empty
LOPS-820	Story	Verified	Vasiliy Kumaev	The system shall provide users with the ability to configure Exception Codes.	products: empty
LOPS-819	Story	Closed	Brandon Culver	The system shall have the ability to record the Disposition of an assay.	products: empty
LOPS-780	Story	Verified	Vasiliy Kumaev	The system shall have the ability to record the Sample Expiration Date	products: empty
LOPS-769	Task	Closed	Vasilii Sevriugin	Enable change of consumers on the fly so that it does not require service restart	products: empty

LOPS Sprint 03 (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-833	Task	Closed	Mai Ton-Nu	Import Signatera WES reagent types into LOPS Staging environment	products: invalid values ['Signatera WES']
LOPS-813	Task	Closed	—	Prepare for and execute LOPS UX demo for Lab Ops	products: invalid values ['Other']
LOPS-812	Task	Closed	Michael Livingston	Platform Integration Demo	products: empty
LOPS-808	Task	Closed	Matt Smith	Correct GitLab Pipeline to Send Updated Jar File to Artifactory	products: empty
LOPS-806	Task	Closed	Vasiliy Kumaev	Create script for creating assay request message transactions in bulk	products: empty
LOPS-791	Story	Closed	Chris Lott	The system shall have the ability to display the testing lab on the sample	products: empty
LOPS-789	Tweak	Verified	Vasiliy Kumaev	Automatically set bootstrap.servers url for producers to be based on env deployed	products: invalid values ['Other']
LOPS-786	Task	Closed	Michael Livingston	Spike - Create design for how to include the controls in the pipe launch request and pipe results	products: empty
LOPS-785	Task	Closed	—	Test LIMS - LOPS integration - accessioning workflow for samples	products: invalid values ['Signatera CLIA']
LOPS-782	Tweak	Closed	Chris Lott	The system shall have the ability to scan one or more sample barcodes	products: empty
LOPS-768	Task	Closed	Vasilii Sevriugin	Implement database changes to enable pulling from transaction types, etc	products: empty
LOPS-767	Task	Closed	Vasilii Sevriugin	Add Spring service to GitLab pipelines	products: empty
LOPS-766	Task	Closed	Vasilii Sevriugin	Get current version of the SprintBoot service working	products: empty
LOPS-756	Task	Closed	Matt Smith	SPIKE - Finalize the documentation for a method for deploying the reagent sync objects	products: invalid values ['Signatera WES']
LOPS-741	Task	Closed	Vasilii Sevriugin	Create developer documentation to guide them in the use of the new schema registry	products: invalid values ['Other']
LOPS-739	Tweak	Verified	Vasiliy Kumaev	Failed to process action 'LoadArray'. Reason: Failed to process action 'AdjustTrackItemInv'. Reason: Failed to convert u	products: empty
LOPS-738	Task	Closed	Matt Smith	Assess which requirements are impacted by changes in to the assay request message schema	products: empty
LOPS-736	Tweak	Verified	Michael Livingston	Update the Germline and Somatic Sample Template to received required and no auto reciept.	products: empty
LOPS-670	Task	Closed	Vasiliy Kumaev	Create a way to generate accessioning message transactions in bulk	products: empty
LOPS-534	Task	Closed	Vasiliy Kumaev	Review LV and JBoss Logging to Combine into a Single Log File	products: invalid values ['Signatera WES']

LOPS Sprint 02 (24 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-793	Task	Closed	—	Integration tracking with Signatera team	products: empty
LOPS-792	Tweak	Closed	Michael Livingston	Update Sequencing Run Complete Message Processing to check the Instrument Serial Number	products: empty
LOPS-779	Task	Closed	Brad Garrett	Spike - Gap assessment for file-based instrument data transfers	products: invalid values ['Signatera WES']
LOPS-775	Task	Closed	Brad Garrett	Create design plan for approving and rejecting the datasets and how to trigger the completion of assays	products: empty
LOPS-761	Story	Closed	Vasiliy Kumaev	When the Accessioning Kafka message is processed, the system shall produce a Sample Event Kafka Message in JSON format	products: empty
LOPS-758	Task	Closed	—	Review and update Automation status for test cases	products: empty
LOPS-757	Task	Closed	Brandon Culver	Document custom fields for Reagent sync	products: invalid values ['Signatera WES']
LOPS-755	Story	Closed	Michael Livingston	Update: The Pipeline Launch Request shall be in JSON format and contain information required by Pipeline.	products: empty
LOPS-753	Task	Closed	Brad Garrett	Spike - Create design plan for handling "WES Analysis + Primer Design" assay request and pipeline results	products: empty
LOPS-752	Tweak	Closed	Brandon Culver	The system shall provide users with the ability to search the array list page by barcode.	products: invalid values ['Signatera WES']
LOPS-751	Tweak	Closed	Brandon Culver	The system shall have the ability to record a plate barcode on an array.	products: invalid values ['Signatera WES']
LOPS-743	Story	Closed	Brad Garrett	The system shall have the ability to define the Sample as Archive	products: empty
LOPS-734	Task	Closed	Michael Livingston	The system shall provide a way for users to view run, batch, and sample level results that are recorded from a Pipeline	products: empty
LOPS-725	Sub-task	Closed	Brandon Culver	Create Design Description and PSD for Reagent Shipping	products: empty
LOPS-724	Sub-task	Closed	Brandon Culver	Support SQE Team for Testing of Reagent Shipping	products: invalid values ['Other']
LOPS-723	Story	Closed	Vasiliy Kumaev	Update: When the system parses the Assay Request Management messages, the required data will be captured in the appropr	products: empty
LOPS-695	Tweak	Closed	Brad Garrett	The system shall allow the addition of samples to a Released Request	products: empty
LOPS-687	Story	Verified	Brandon Culver	Implement the ability to ship some portion of a reagent lot and requalify that group of containers	products: invalid values ['Other']
LOPS-686	Story	Verified	Brandon Culver	Record manufacture date on reagent lot	products: invalid values ['Other']
LOPS-682	Task	Closed	—	Spike - In-line QC reagent qualification	products: invalid values ['Other']
LOPS-677	Story	Verified	Michael Livingston	Provide the ability to track plate usage at the well level	products: invalid values ['Other']
LOPS-634	Task	Closed	Vasilii Sevriugin	Develop the script that registers schemas	products: invalid values ['Other']
LOPS-370	Sub-task	Closed	—	Matt + Chris: Confirm whether we can do short-term fix now until larger rework is done for IMT	products: empty
LOPS-366	Tweak	Closed	Matt Smith	Fix hardcoded bootstrap.servers url to be based on env deployed	products: invalid values ['Other']

LOPS Sprint 01 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-759	Task	Closed	Brad Garrett	Outline Action Execution flow for Instrument RunData processing	products: empty
LOPS-754	Task	Closed	Matt Smith	Update LOPS External JAR Version	products: empty
LOPS-750	Task	Closed	Matt Smith	Set INTF Service Monitoring Interval From Environment Variable	products: invalid values ['Signatera WES']
LOPS-744	Task	Closed	—	Update Sample Management Event Schema in Kafka	products: empty
LOPS-735	Task	Closed	—	Create Prototype for WES on X Extraction Quant	products: empty
LOPS-730	Task	Closed	Brad Garrett	Spike Task: Prototype Array transfers and Array method assignment in the workflow module	products: invalid values ['Other']
LOPS-726	Task	Closed	Brandon Culver	Reagents Demo Prep	products: invalid values ['Other']
LOPS-721	Task	Closed	—	SPIKE - Investigate and draft the documentation for a method for deploying the reagent sync objects	products: invalid values ['Signatera WES']
LOPS-719	Task	Closed	Vasilii Sevriugin	Create LOPS Kafka User and ACLS Permissions	products: empty
LOPS-718	Tweak	Closed	Vasiliy Kumaev	The system shall have the ability to record the Line Item IDs, External References, and Assay Params associated with an	products: empty
LOPS-717	Task	Closed	Vasilii Sevriugin	Add Kafka Keystore Mapped Directory to Containers	products: empty
LOPS-645	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	products: empty
LOPS-581	Sub-task	Closed	Brad Garrett	Spike - Confirm specifications/thresholds are working correctly for text values in array params	products: empty
LOPS-576	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate run level QC metrics.	products: empty
LOPS-575	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate batch level QC metrics.	products: empty
LOPS-574	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate sample level QC metrics.	products: empty
LOPS-452	Tweak	Verified	Vasilii Sevriugin	Switch Kafka consumers to use Kafka event hub	products: empty

No Sprint Assigned (611 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9943	Sub-task	Closed	Michael Livingston	Dev Testing Bug in Rerun Query for Verso Worklist generation.	products: empty
LOPS-9932	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.14.1	products: invalid values ['sgNIPT']
LOPS-9897	Task	Closed	Bob Ruff	Research for Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	products: invalid values ['sgNIPT']
LOPS-9870	Sub-task	Closed	Bob Ruff	Dev Testing - Filter out Cancelled Samples During runlog processing.	products: invalid values ['sgNIPT']
LOPS-9807	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.15.0	products: empty
LOPS-9788	Defect	Verified	Michael Livingston	After Test Method is Canceled for the Sample the next Test Process is added automatically.	products: invalid values ['sgNIPT']
LOPS-9783	Story	Verified	Bob Ruff	RunLog Processing: Filter Cancelled Samples When Entering Results Directly on Samples	products: invalid values ['sgNIPT']
LOPS-9782	Defect	Closed	Michael Livingston	Sequencing Run is not completed for Assay43 and Assay44	products: invalid values ['sgNIPT']
LOPS-9768	Defect	Verified	Michael Livingston	Bug in Rerun Query for Verso Worklist generation.	products: invalid values ['sgNIPT']
LOPS-9735	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.13.1	products: empty
LOPS-9733	Story	Verified	Michael Livingston	Error While Doing QC Review for sgNIPT cfDNA Pool Quantification Review	products: invalid values ['sgNIPT']
LOPS-9707	Task	Closed	Michael Livingston	Update CODEOWNER permissions	products: empty
LOPS-9689	Sub-task	Closed	Bob Ruff	Dev Testing - Filter biobanked out of sample list page	products: invalid values ['sgNIPT']
LOPS-9667	Task	Closed	Kristina Feller	SgNIPT Automated Regression for 1.0.14.0	products: empty
LOPS-9662	Sub-task	Closed	Bob Ruff	Dev Testing - Verso Worklist Retrieval for biobank Issues	products: invalid values ['sgNIPT']
LOPS-9645	Sub-task	Closed	Bob Ruff	Dev Testing - When samples are biobanked, previous storage needs to be cleared	products: invalid values ['sgNIPT']
LOPS-9635	Sub-task	Closed	Brandon Culver	Dev Testing - Verify Automated Qubit file import	products: empty
LOPS-9633	Sub-task	Closed	Bob Ruff	Dev Testing - Ability to process biobanking runlog in LOPS	products: invalid values ['sgNIPT']
LOPS-9600	Defect	Verified	Mehmet Ali Eken	Pipeline Request cannot be sent for QIP	products: invalid values ['sgNIPT']
LOPS-9575	Story	Verified	Bob Ruff	Filter biobanked out of sample list page	products: invalid values ['sgNIPT']
LOPS-9571	Sub-task	Closed	Michael Livingston	Dev Testing - Verso runlog auto-uploading	products: invalid values ['sgNIPT']
LOPS-9570	Task	Closed	Bob Ruff	Dev Testing - Sample status is not changes if Qubit runlog was processed.	products: empty
LOPS-9550	Defect	Verified	Michael Livingston	Parameter List sgNIPT cfDNA Normalization for Manual Recovery 1 var.Evaluation has flipped datatypes for param Matrix/Mi	products: invalid values ['sgNIPT']
LOPS-9547	Defect	Verified	Michael Livingston	cherry pick individual rework samples from completed assays throw RI error	products: invalid values ['sgNIPT']
LOPS-9537	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.13.0	products: empty
LOPS-9522	Story	Verified	Michael Livingston	Update Post Lib Quant 'Accept Partial' Logic	products: invalid values ['sgNIPT']
LOPS-9521	Story	Verified	Bob Ruff	Verso Worklist Retrieval for biobank Issues	products: invalid values ['sgNIPT']
LOPS-9520	Story	Verified	Bob Ruff	When samples are biobanked, previous storage needs to be cleared	products: invalid values ['sgNIPT']
LOPS-9511	Sub-task	Closed	Brandon Culver	Dev Testing - Control Assay QC Report only outputs results related to corresponding batch-level	products: empty
LOPS-9510	Sub-task	Closed	Brandon Culver	Dev Testing - Handling of Plasma Isolation runlog Error Code 2 scenario	products: empty
LOPS-9509	Sub-task	Closed	Brandon Culver	Dev Testing - Update Qiasymphony runlog to allow for ingestion of error message	products: empty
LOPS-9496	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.12.0	products: empty
LOPS-9481	Story	Verified	Brandon Culver	Cherrypick tfMRD Updates to Plasma Isolation Runlog Processing - Mislabeled Streck Barcode	products: invalid values ['sgNIPT']
LOPS-9402	Sub-task	Closed	Michael Livingston	Dev Testing - Algs pipe trigger failed due to multiple PipeJobIds on Algs Assay(Assay45))	products: empty
LOPS-9383	Story	Verified	Brandon Culver	Update Assay QC Control Report Results query to filter results by input barcode plate	products: invalid values ['sgNIPT']
LOPS-9382	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.11.0	products: empty
LOPS-9374	Sub-task	Closed	—	Dev Testing - Update Biobanking worklist query to allow full loading of 96-tube rack	products: empty
LOPS-9352	Sub-task	Closed	Michael Livingston	Dev Testing - Standard Test Methods added automatically during Manual Steps (gDNA	products: empty
LOPS-9336	Tweak	Verified	Gianna Bell-Eunice	Remove Rework Cherry Picking button from Array List page	products: invalid values ['sgNIPT']
LOPS-9334	Sub-task	Closed	Michael Livingston	Dev Testing - Cancelled tests are preventing the assay from updating to Completed status	products: empty
LOPS-9325	Tweak	Closed	Michael Livingston	Update gDNA Extraction Quant QC Review to fail wells against "Plate-Level Sample QC" param	products: invalid values ['sgNIPT']
LOPS-9322	Defect	Verified	Kathy Dao	Update Biobanking worklist query to allow full loading of 96-tube rack	products: invalid values ['sgNIPT']
LOPS-9261	Sub-task	Closed	Bob Ruff	Dev Testing - Update cfDNA Pool Quant QC Review to Approve/Reject Results	products: empty
LOPS-9260	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Dedicated tramstop for Iso/Ext	products: empty
LOPS-9233	Tweak	Verified	Kathy Dao	Update worklist folder mapping	products: invalid values ['sgNIPT']
LOPS-9224	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.10.0	products: empty
LOPS-9218	Sub-task	Closed	—	Implement QIP sample import processor	products: empty
LOPS-9217	Sub-task	Closed	—	Import sample csv file task and processor	products: empty
LOPS-9190	Sub-task	Closed	Brandon Culver	Dev Testing - Update to generate Pool Number and DestWell from alternating wells on HYB Day 2 Plates	products: empty
LOPS-9186	Story	Verified	Brandon Culver	Update Automated Qubit File Import	products: invalid values ['sgNIPT']
LOPS-9185	Task	Closed	Brandon Culver	SPIKE: Investigate ongoing NOREAD error handling for Iso/Ext	products: empty
LOPS-9184	Task	Closed	Mehmet Ali Eken	Proficiency Sample Data Product	products: empty
LOPS-9183	Sub-task	Closed	Kathy Dao	Dev Testing - Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a	products: empty
LOPS-9182	Sub-task	Closed	Brandon Culver	Dev Testing - Update Cherry Picking Logic	products: empty
LOPS-9177	Sub-task	Closed	Gianna Bell-Eunice	Dev testing - Update Qiasymphony runlog to allow for ingestion of error message.	products: empty
LOPS-9176	Story	Verified	Brandon Culver	update Qiasymphony runlog parsing to allow for ingestion of error message as they come from the instrument	products: invalid values ['sgNIPT']
LOPS-9171	Task	Closed	—	PSPC LOPS Test Automation script: ASSAY-43 failed on ProcessResultAction	products: invalid values ['sgNIPT']
LOPS-9148	Sub-task	Closed	Michael Livingston	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Prep	products: empty
LOPS-9124	Defect	Verified	Lev Evstratov	Runlog service fails to process non UTF-8 encoded files	products: invalid values ['sgNIPT']
LOPS-9121	Defect	Verified	Brandon Culver	Fix available rework count logic in Hybrid Day 1 worklist cherry pick task	products: invalid values ['sgNIPT']
LOPS-9116	Sub-task	Closed	—	Dev Testing - Resolve Assay Request message processing failure when Exception subfields are present	products: empty
LOPS-9110	Defect	Verified	Michael Livingston	Standard Test Methods added automatically during Manual Steps (gDNA	products: invalid values ['sgNIPT']
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	products: invalid values ['sgNIPT']
LOPS-9106	Defect	Verified	Michael Livingston	Worklists cannot be downloaded in Assay 43 and 44	products: invalid values ['sgNIPT']
LOPS-9086	Sub-task	Closed	Brandon Culver	Dev Testing - Verso Retrieve Runlog not completing Racking Process Test	products: empty
LOPS-9084	Sub-task	Closed	Brandon Culver	Dev Testing - Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	products: empty
LOPS-9082	Tweak	Verified	Brandon Culver	Wrong worklist folder name - LRPCR LibPrep	products: invalid values ['sgNIPT']
LOPS-9080	Sub-task	Closed	Mehmet Ali Eken	Dev testing - cfDNA Hyb Day1 worklist has incorrect parameters order	products: empty
LOPS-9076	Defect	Verified	Mehmet Ali Eken	cfDNA Hyb Day1 worklist has incorrect parameters order	products: invalid values ['sgNIPT']
LOPS-9075	Sub-task	Closed	Bob Ruff	Dev Testing - Update to automate Push to source Array	products: empty
LOPS-9074	Sub-task	Closed	Michael Livingston	Dev Testing - Create Task Definitions for General Manual Array Steps and for sgNIPT cfDNA PostLig Purification	products: empty
LOPS-9069	Story	Verified	Michael Livingston	Guided Workflow: gDNA Sequencing Prep	products: invalid values ['sgNIPT']
LOPS-9062	Tweak	Verified	Kathy Dao	Associate consumable to to current gDNA Primer Plates and Array Method	products: invalid values ['sgNIPT']
LOPS-9044	Defect	Verified	Mehmet Ali Eken	Pacbio Sequencing - RunId allows manual data entry although it is a dropdown list	products: invalid values ['sgNIPT']
LOPS-9033	Sub-task	Closed	Gianna Bell-Eunice	Dev testing - Update Qiasymphony runlog to allow for ingestion of error message.	products: empty
LOPS-9027	Task	Closed	Bob Ruff	Remove sample limit for biobanking verso retrieve	products: invalid values ['sgNIPT']
LOPS-9026	Sub-task	Closed	Brandon Culver	Dev Testing - Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ genes	products: empty
LOPS-9020	Story	Verified	Mehmet Ali Eken	QIP Testing - Create Rack Worklist Node with updated min/max limits	products: invalid values ['sgNIPT']
LOPS-9019	Task	Closed	Kathy Dao	User Guide M7 Updates	products: empty
LOPS-9016	Tweak	Verified	Brandon Culver	Capture Worklist - Update to generate Pool Number and DestWell from alternating wells on HYB Day 2 Plates	products: invalid values ['sgNIPT']
LOPS-9013	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.8.0 & 1.0.9.0	products: empty
LOPS-9001	Story	Verified	Mehmet Ali Eken	Entry point for QIP	products: invalid values ['sgNIPT']
LOPS-9000	Story	Verified	Mehmet Ali Eken	Entry point for Proficiency samples	products: invalid values ['sgNIPT']
LOPS-8991	Sub-task	Closed	Michael Livingston	Dev Testing - Automate Qubit file import to eliminate manual data entry	products: empty
LOPS-8966	Story	Verified	Brandon Culver	Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	products: invalid values ['sgNIPT']
LOPS-8965	Task	Closed	Brandon Culver	Reagent Lot Migration for YALP e2e	products: empty
LOPS-8964	Task	Closed	Mearat Hou	Update keh producer class to produce message with the latest schema	products: empty
LOPS-8963	Task	Closed	Mearat Hou	Update kafka consumer lambda to process the updated schema	products: empty
LOPS-8961	Task	Closed	Gianna Bell-Eunice	SPIKE - evaluate which worklists need to exclude samples with cancelled tests	products: empty
LOPS-8958	Sub-task	Closed	Brandon Culver	Dev Testing - cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	products: empty
LOPS-8956	Task	Closed	Mearat Hou	Deployment for labxuat-01 (e2e) environment	products: empty
LOPS-8955	Task	Closed	Mearat Hou	Deployment for yalp-dev-01 environment	products: empty
LOPS-8954	Task	Closed	Kathy Dao	Spike Task: Manual test is added when test is not available causing sequencing run issues	products: invalid values ['sgNIPT']
LOPS-8953	Story	Verified	Bob Ruff	Update cfDNA Pool Quant QC Review to Approve/Reject Results	products: invalid values ['sgNIPT']
LOPS-8947	Sub-task	Closed	Michael Livingston	Dev Testing - Normalization run data file fails in processing because contains failed samples	products: empty
LOPS-8930	Defect	Verified	Brandon Culver	Verso Retrieve Runlog not completing Racking Process Test	products: invalid values ['sgNIPT']
LOPS-8929	Defect	Closed	—	cfDNA Pool Quant QC Review is not Releasing Pool Quant Results	products: invalid values ['sgNIPT']
LOPS-8925	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.6.1 ePatch	products: empty
LOPS-8914	Sub-task	Closed	—	Assist automation team in runlog integration service testing	products: invalid values ['sgNIPT']
LOPS-8907	Sub-task	Closed	Mehmet Ali Eken	Dev Testing - LOPS Support of QIP testing of control samples	products: empty
LOPS-8906	Story	Verified	Mearat Hou	Implement Reagent Container Usage Endpoint	products: invalid values ['Other']
LOPS-8905	Story	Verified	Mearat Hou	Implement Reagent Containers API Endpoints	products: invalid values ['Other']
LOPS-8904	Story	Verified	Mearat Hou	Implement Reagent Types API Endpoints	products: invalid values ['Other']
LOPS-8903	Story	Verified	Mearat Hou	Implement Reagent Lots API Endpoints	products: invalid values ['Other']
LOPS-8901	Story	Verified	Mearat Hou	Add additional fields to LV1.0 datasource connector column.include.list	products: invalid values ['Other']
LOPS-8899	Story	Verified	Bob Ruff	Update to automate Push to source Array	products: invalid values ['sgNIPT']
LOPS-8890	Story	Verified	Michael Livingston	Verso runlog auto-uploading	products: invalid values ['sgNIPT']
LOPS-8884	Task	Closed	Bob Ruff	Fix Typo in NtrStorageWorklistGenerator task	products: invalid values ['sgNIPT']
LOPS-8881	Sub-task	Closed	Bob Ruff	Dev-Testing - Implementation of a reagent verification in LOPS to prevent the use of expired tapestation reagents	products: empty
LOPS-8879	Sub-task	Closed	Michael Livingston	Dev Testing - cfDNA Rework Scenario Handling (PostLib Quant) should support 1 half of the plate	products: empty
LOPS-8877	Defect	Verified	Michael Livingston	Normalization run data file fails in processing because contains failed samples	products: invalid values ['sgNIPT']
LOPS-8872	Sub-task	Closed	Lev Evstratov	Failing to process "sgNIPT cfDNA Library Prep A-Tailing" rundata	products: invalid values ['sgNIPT']
LOPS-8845	Task	Closed	Bob Ruff	Investigate lack of samples transferring to 'Marked for Biobank' in LOPS Prod	products: empty
LOPS-8844	Story	Verified	Lev Evstratov	Instrument Integration Runlog processing	products: invalid values ['sgNIPT']
LOPS-8831	Story	Verified	Gianna Bell-Eunice	Update Qiasymphony runlog to allow for ingestion of error message.	products: invalid values ['sgNIPT']
LOPS-8828	Task	Closed	Bob Ruff	Additional Pipeline Integration Query Changes	products: empty
LOPS-8824	Defect	Verified	Brandon Culver	M6 - cfDNA Hybrid Day 1 worklist has "SourcePosition":null and "Concentration":null	products: invalid values ['sgNIPT']
LOPS-8823	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.7.0 + 1.0.7.1	products: empty
LOPS-8818	Story	Verified	Gianna Bell-Eunice	Dedicated menu and tramstops for Iso/Ext	products: invalid values ['sgNIPT']
LOPS-8797	Sub-task	Closed	Bob Ruff	Dev Testing - Add the ability to clear custody from trackitems	products: invalid values ['sgNIPT']
LOPS-8763	Story	Verified	Michael Livingston	Guided Workflow: General Manual Array Steps and for cfDNA PostLig Purification	products: invalid values ['sgNIPT']
LOPS-8761	Tweak	Verified	Mehmet Ali Eken	"sgNIPT gDNA Sequencing RunDetails" v2 test method is underconfigured	products: invalid values ['sgNIPT']
LOPS-8760	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant) should support 1 half of the plate	products: invalid values ['sgNIPT']
LOPS-8754	Sub-task	Closed	Brandon Culver	Dev Testing - Barcoding Runlog processor loads correct gene sibling sample to barcoding plate	products: empty
LOPS-8751	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.6.0	products: empty
LOPS-8745	Task	Closed	Lev Evstratov	Fix conductor deployment for Runlog integration service	products: empty
LOPS-8728	Defect	Verified	Catalin Parvana	VersoDefaultRunLogHeaders is not recorded in SDI group	products: invalid values ['sgNIPT']
LOPS-8727	Sub-task	Closed	Michael Livingston	Dev Testing - Update reserving spaces for retrieval process for rework samples	products: empty
LOPS-8726	Sub-task	Closed	Bob Ruff	Dev Testing - Leave positions empty on new lib prep plates to accommodate rework	products: empty
LOPS-8725	Story	Verified	Michael Livingston	Update reserving spaces for retrieval process for rework samples	products: invalid values ['sgNIPT']
LOPS-8709	Defect	Verified	Brandon Culver	Resolve Assay Request message processing failure when Exception subfields are present	products: invalid values ['sgNIPT']
LOPS-8707	Sub-task	Closed	—	Dev Testing - Update Instrument type on Array Method for sgNIPT cfDNA Post Ligation Purification	products: empty
LOPS-8706	Tweak	Verified	Kathy Dao	Update Instrument type on Array Method for sgNIPT cfDNA Post Ligation Purification	products: invalid values ['sgNIPT']
LOPS-8701	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.5.2	products: empty
LOPS-8690	Sub-task	Closed	Kathy Dao	Dev Testing - PacBio Sequencing - Add Run ID to LOPS	products: empty
LOPS-8688	Sub-task	Closed	Kathy Dao	Dev Testing - Associate New Primer Plate to Lib Amp Array Method	products: empty
LOPS-8686	Sub-task	Closed	Kathy Dao	Dev Testing - New reagent and primer plate for HC	products: empty
LOPS-8683	Task	Closed	Mearat Hou	Request Kafka team to remove incident, incidentitem, and instrument topics and associated schema registries and update t	products: empty
LOPS-8682	Story	Verified	Brandon Culver	Update Cherry Picking Logic	products: invalid values ['sgNIPT']
LOPS-8680	Sub-task	Closed	Mearat Hou	Dev Testing - Ability to Delete Reagent Lots by Reagent Users	products: empty
LOPS-8677	Story	Closed	Mehmet Ali Eken	LOPS Support of QIP testing with verso	products: invalid values ['sgNIPT']
LOPS-8663	Sub-task	Closed	—	Dev Testing - Restrict "take custody" to just lab managers/supervisors	products: empty
LOPS-8662	Sub-task	Closed	Bob Ruff	Dev Testing - Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	products: empty
LOPS-8658	Story	Verified	Bob Ruff	Add the ability to clear custody from trackitems	products: invalid values ['sgNIPT']
LOPS-8652	Story	Closed	Bob Ruff	Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	products: invalid values ['sgNIPT']
LOPS-8651	Defect	Verified	Brandon Culver	cfDNA Hybrid Day 1 worklist has "SourcePosition":null and "Concentration":null	products: invalid values ['sgNIPT']
LOPS-8645	Defect	Closed	Mehmet Ali Eken	Update Calulation for Half Plate 1 and 2 for Control Failures	products: invalid values ['sgNIPT']
LOPS-8640	Story	Verified	Kathy Dao	New Job Type in sgNIPT for members of the Reagent team to delete lots.	products: invalid values ['sgNIPT']
LOPS-8637	Task	Closed	—	LRPCR Guided workflows / validations - Kathy	products: empty
LOPS-8624	Task	Closed	Kathy Dao	Hypercare Fixes - Kathy	products: empty
LOPS-8621	Task	Closed	Kathy Dao	FF E2E Support - Kathy	products: empty
LOPS-8609	Sub-task	Closed	—	(LV1.0) Create new reagents_lops_user LV account as clone of intf_lops_user	products: empty
LOPS-8608	Sub-task	Closed	—	(wes/wgs) Create new reagents_lops_user LV account as clone of intf_lops_user	products: empty
LOPS-8552	Story	Closed	Kathy Dao	User prep for e2e	products: invalid values ['sgNIPT']
LOPS-8551	Story	Verified	Gianna Bell-Eunice	Associate New Primer Plate to Lib Amp Array Method	products: invalid values ['sgNIPT']
LOPS-8538	Task	Closed	Catalin Parvana	Support Fast Follow E2E	products: invalid values ['sgNIPT']
LOPS-8534	Story	Closed	Gianna Bell-Eunice	Reagent prep for e2e	products: invalid values ['sgNIPT']
LOPS-8522	Defect	Verified	Brandon Culver	Investigate incorrect gene barcoding TM being added incorrect gene sample	products: invalid values ['sgNIPT']
LOPS-8521	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Update Verso logic to allow for StartTime and EndTime rather than TimeStamp	products: invalid values ['sgNIPT']
LOPS-8510	Sub-task	Closed	Michael Livingston	Dev Testing - Create a validation on the entry of flowcell id for HC	products: empty
LOPS-8500	Task	Closed	Michael Livingston	Refactor generation of cfDNA Hybridization Worklist	products: invalid values ['sgNIPT']
LOPS-8489	Task	Closed	Lev Evstratov	Fail fast adjustments for runlog integration service startup	products: empty
LOPS-8484	Story	Verified	Michael Livingston	sgNIPT cfDNA PostLib Quant Control Swap	products: invalid values ['sgNIPT']
LOPS-8480	Defect	Closed	Mehmet Ali Eken	Half Plate – Level Sample QC Evaluation calculates all wells, regardless of whether they are occupied or not.	products: invalid values ['sgNIPT']
LOPS-8479	Sub-task	Closed	Gianna Bell-Eunice	(sgNIPT) Create new reagents_lops_user LV account as clone of intf_lops_user	products: empty
LOPS-8477	Story	Verified	Mearat Hou	Update Reagent API to send "valid" in instances of in-line valid	products: invalid values ['sgNIPT']
LOPS-8437	Story	Verified	Kathy Dao	Restrict access to "Add Test" button	products: invalid values ['sgNIPT']
LOPS-8435	Story	Verified	Mehmet Ali Eken	LOPS Support of QIP testing of control samples	products: invalid values ['sgNIPT']
LOPS-8433	Defect	Verified	Michael Livingston	Algs pipe trigger failed due to multiple PipeJobIds on Algs Assay(Assay45))	products: invalid values ['sgNIPT']
LOPS-8418	Story	Closed	Brandon Culver	Update Runlog Processing for cfDNA Hybridization	products: invalid values ['sgNIPT']
LOPS-8416	Defect	Verified	Mehmet Ali Eken	Jasper report has the wrong AM for Assay-43	products: invalid values ['sgNIPT']
LOPS-8390	Story	Verified	Gianna Bell-Eunice	Update Verso logic to allow for StartTime and EndTime rather than TimeStamp	products: invalid values ['sgNIPT']
LOPS-8344	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing- Update Reagent Lot List pages New button/Queries	products: empty
LOPS-8343	Sub-task	Closed	—	Test Automation Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode vali	products: empty
LOPS-8342	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for m	products: empty
LOPS-8340	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing-Update Master Data for MM FFHC-BEAD1 for Alternate Part	products: empty
LOPS-8333	Sub-task	Closed	Lev Evstratov	Add into RunLogConfigPolicy‎ specific Verso store and retrieval nodes for gDNA	products: invalid values ['sgNIPT']
LOPS-8326	Story	Verified	Mehmet Ali Eken	Update Error validating Barcodes after Plasma isolation runlog rerun	products: invalid values ['sgNIPT']
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	products: invalid values ['sgNIPT']
LOPS-8228	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can download Extraction Quant Worklist	products: empty
LOPS-8225	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on trackitem transformer	products: invalid values ['sgNIPT']
LOPS-8224	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on reagentlot transformer	products: invalid values ['sgNIPT']
LOPS-8223	Story	Closed	Mearat Hou	Stop instrument record sync and remove associated transformer from reagent-sync-service	products: invalid values ['sgNIPT']
LOPS-8222	Story	Closed	Mearat Hou	Stop incident record sync and remove associated filter and transformer from reagent-sync-service	products: invalid values ['sgNIPT']
LOPS-8221	Task	Closed	Mearat Hou	Clean up references to u_kafkamessage from kafka_connect_lv_connector.json in config repo	products: invalid values ['sgNIPT']
LOPS-8211	Defect	Verified	Brandon Culver	LRPCR Pipe Results Message query should convert UUIDs and maintain case	products: invalid values ['sgNIPT']
LOPS-8206	Defect	Verified	Brandon Culver	LRPCR Pipe Results Message query should convert UUIDs to strings	products: invalid values ['sgNIPT']
LOPS-8200	Story	Verified	Michael Livingston	Automate Qubit File Import to Eliminate Manual Data Entry	products: invalid values ['sgNIPT']
LOPS-8194	Defect	Verified	Brandon Culver	LRPCR Pipe launch request must provide unique sequencing sample id for reused controls	products: invalid values ['sgNIPT']
LOPS-8144	Story	Verified	Gianna Bell-Eunice	Update Master Data for MM FFHC-BEAD1 for Alternate Parts	products: invalid values ['sgNIPT']
LOPS-8133	Story	Verified	Michael Livingston	Runlog should fail when primers are not loaded	products: invalid values ['sgNIPT']
LOPS-8129	Task	Closed	Michael Livingston	Please populate the attached table	products: invalid values ['sgNIPT']
LOPS-8125	Task	Closed	Bob Ruff	Update IT for single gDNA sample having multiple LRPCR Assays	products: invalid values ['sgNIPT']
LOPS-8120	Task	Closed	Lev Evstratov	Spike: investigate how deduplication works in intfservice	products: empty
LOPS-8102	Task	Closed	Bob Ruff	Status IQ: dashboard to show rework samples	products: empty
LOPS-8092	Story	Verified	Brandon Culver	Prevent users from putting incorrect gene child sample on a gene specific plate	products: invalid values ['sgNIPT']
LOPS-8082	Story	Verified	Mehmet Ali Eken	PacBio Sequencing - Add Run ID to LOPS	products: invalid values ['sgNIPT']
LOPS-8078	Task	Closed	Mehmet Ali Eken	Repository: Update Trackitem U_Barcode column max_length value	products: invalid values ['sgNIPT']
LOPS-8074	Task	Closed	Michael Livingston	Prevent rir_api_user account from continuously getting disabled	products: invalid values ['sgNIPT']
LOPS-8071	Sub-task	Closed	Mehmet Ali Eken	AM - sgNIPT cfDNA Pool Quant Review - 1 (Pool Dilution Worklist)	products: empty
LOPS-8070	Sub-task	Closed	Michael Livingston	AM - sgNIPT cfDNA Capture - 1 (Pool Quant Worklist)	products: invalid values ['sgNIPT']
LOPS-8069	Sub-task	Closed	Mehmet Ali Eken	AM - sgNIPT cfDNA Hybridization - 1 (Capture - HC Day 2 Worklist)	products: invalid values ['sgNIPT']
LOPS-8068	Sub-task	Closed	Michael Livingston	AM - sgNIPT cfDNA PostLib Quant Review - 1 (Hybridization - HC Day 1 Worklist)	products: invalid values ['sgNIPT']
LOPS-8067	Task	Closed	Lev Evstratov	Create list of reagents with units config issues	products: invalid values ['sgNIPT']
LOPS-8066	Story	Verified	Michael Livingston	Add new HC Lib Prep barcode suffix -SGBND for EDTA Plate (Biorad)	products: invalid values ['sgNIPT']
LOPS-8065	Story	Verified	Bob Ruff	Leave positions empty on new lib prep plates to accommodate rework	products: invalid values ['sgNIPT']
LOPS-8064	Story	Verified	Brandon Culver	Barcode collision check for HC Day 1	products: invalid values ['sgNIPT']
LOPS-8062	Story	Verified	Kathy Dao	Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a link to a filt	products: invalid values ['sgNIPT']
LOPS-8060	Story	Verified	Bob Ruff	Ability to process biobanking runlog in LOPS	products: invalid values ['sgNIPT']
LOPS-8059	Task	Closed	Kathy Dao	Update sgNIPT cfDNA Pool Sequencing Process MD in sgNIPT Prod and associated samples	products: invalid values ['sgNIPT']
LOPS-8050	Tweak	Verified	Kathy Dao	Update Assay-00041 (AT-00020)	products: invalid values ['sgNIPT']
LOPS-8049	Story	Verified	Mai Ton-Nu	Update basic Search, Scan Id Query fields and update list page to view barcode from the Select Trackitem Page (LV_TrackI	products: invalid values ['sgNIPT']
LOPS-8036	Defect	Verified	Kathy Dao	LR-PCR Quantification/DNA Concentration result outputs for #SAT should display 100	products: invalid values ['sgNIPT']
LOPS-8026	Defect	Verified	Lev Evstratov	Incorrect gene racking workitem completed after processing Verso retrieval runlog	products: invalid values ['sgNIPT']
LOPS-8024	Story	Verified	Gianna Bell-Eunice	Update Reagent Lot List pages New button/Queries	products: invalid values ['sgNIPT']
LOPS-8019	Story	Verified	Michael Livingston	Create a validation on the entry of flowcell id for HC	products: invalid values ['sgNIPT']
LOPS-8012	Story	Verified	Mehmet Ali Eken	Update the processing of sequence complete message	products: invalid values ['sgNIPT']
LOPS-8006	Story	Verified	Michael Livingston	gDNA Pre-Extraction worklist included the samples that are placed into the Storage	products: invalid values ['sgNIPT']
LOPS-7983	Story	Closed	Mehmet Ali Eken	Create new functionality to accept the upload start sequencing message	products: invalid values ['sgNIPT']
LOPS-7976	Task	Closed	Mikhail Novokshchenov	[TEST ONLY] Hybrid Capture End Tail and LR-PCR Barcode Run Log with Retests Issue	products: invalid values ['sgNIPT']
LOPS-7975	Story	Verified	Brandon Culver	cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	products: invalid values ['sgNIPT']
LOPS-7966	Task	Closed	Mehmet Ali Eken	Verify that all control lots have quality sample with ffe thresholds populated	products: invalid values ['sgNIPT']
LOPS-7959	Task	Closed	Kathy Dao	[TEST ONLY] Identify current state for new LRPCR Sequencing Run Loading Scenarios	products: invalid values ['sgNIPT']
LOPS-7958	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.3.1 ePatch 3	products: invalid values ['sgNIPT']
LOPS-7948	Task	Closed	Gianna Bell-Eunice	Investigate all control reagent types to make sure consumable class is set to control	products: invalid values ['sgNIPT']
LOPS-7947	Task	Closed	Mai Ton-Nu	Manual Updates in Prod: sgNIPT cfDNA Manual Recovery Reverted Items, Update to original State	products: invalid values ['sgNIPT']
LOPS-7945	Tweak	Verified	Mai Ton-Nu	Repository: sgNIPT cfDNA Manual Recovery Reverted Items, Update to original State	products: invalid values ['sgNIPT']
LOPS-7938	Defect	Closed	Bob Ruff	Unable to Promote gDNA Pool Dilution Results due to unable to Perform QC review on Tapestation Pool Quant Plate.	products: invalid values ['sgNIPT']
LOPS-7933	Task	Closed	—	tfMRD - Add Merge Request Bot to GitLab LabWorkflows repo	products: empty
LOPS-7921	Task	Closed	Catalin Parvana	WES/WGS - Add Merge Request Bot to GitLab LabWorkflows repo	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-7918	Task	Closed	Bob Ruff	Verify Well Position Formatting (Padded Zeros) for Worklists - LRPCR	products: invalid values ['sgNIPT']
LOPS-7917	Story	Verified	Mai Ton-Nu	Update Well Position Formatting (Padded Zeros) for Worklists - HybridCapture	products: invalid values ['sgNIPT']
LOPS-7915	Story	Verified	Bob Ruff	Implementation of a reagent verification in LOPS to prevent the use of expired tapestation reagents	products: invalid values ['sgNIPT']
LOPS-7912	Sub-task	Closed	Lev Evstratov	Runlog processing from transaction object	products: invalid values ['sgNIPT']
LOPS-7911	Story	Verified	Mai Ton-Nu	Side Bar for sgNIPT Iso/Ext	products: invalid values ['sgNIPT']
LOPS-7910	Defect	Verified	Brandon Culver	Barcoding Runlog Loader fails to load correct sample when processing samples with 2 sibling aliquots	products: invalid values ['sgNIPT']
LOPS-7906	Story	Verified	Gianna Bell-Eunice	Update Group Test Method sgNIPT gDNA Pool Quant-Dilution Process- Seperate Quant steps from dilution test	products: invalid values ['sgNIPT']
LOPS-7900	Story	Verified	Mai Ton-Nu	Update WILookup add Test Edit Role to "Select & Add Tests to Assay" button	products: invalid values ['sgNIPT']
LOPS-7896	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.3.0	products: empty
LOPS-7894	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.2.1 ePatch 2	products: empty
LOPS-7891	Defect	Verified	Gianna Bell-Eunice	LOPS decrementing water master mix in mL rather than uL	products: invalid values ['sgNIPT']
LOPS-7889	Story	Closed	Brandon Culver	Update sgNIPT gDNA Normalization processor & policy for v1.0 Norm runlog	products: invalid values ['sgNIPT']
LOPS-7888	Story	Verified	Brandon Culver	Add Attachment Element to SDIGroup Maint page	products: invalid values ['sgNIPT']
LOPS-7886	Story	Closed	Michael Livingston	Update CreateChildSample action to allow pooling of multiple plasma samples in the same assay	products: invalid values ['sgNIPT']
LOPS-7884	Defect	Verified	Lev Evstratov	Unable to generate Verso Retrieval when samples are queued for multiple gene assays	products: invalid values ['sgNIPT']
LOPS-7872	Task	Closed	Gianna Bell-Eunice	[SPIKE] Investigate Incorrect Gene Samples being plated during barcoding	products: invalid values ['sgNIPT']
LOPS-7859	Task	Closed	Kathy Dao	Spike Ticket: Child Sample Creation for Assay 41 investigation	products: invalid values ['sgNIPT']
LOPS-7837	Task	Closed	Catalin Parvana	Add Merge Request Bot to GitLab LabWorkflows repo	products: empty
LOPS-7832	Story	Verified	Gianna Bell-Eunice	sgNIPT cfDNA Pool Dilution Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transfe	products: invalid values ['sgNIPT']
LOPS-7826	Defect	Verified	Mai Ton-Nu	Rounding of the DNA Concentration Average value leads to confusion in Pass/Fail evaluation.	products: invalid values ['sgNIPT']
LOPS-7823	Story	Verified	Kristina Feller	sgNIPT cfDNA Worklists Generation Updates for Increase number of plates accepted in cfDNA Pool Quantification array and	products: invalid values ['sgNIPT']
LOPS-7822	Story	Verified	Mai Ton-Nu	sgNIPT cfDNA Hybrid (Day 1) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transf	products: invalid values ['sgNIPT']
LOPS-7821	Story	Verified	Brandon Culver	sgNIPT cfDNA Capture (Day 2) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and trans	products: invalid values ['sgNIPT']
LOPS-7819	Story	Verified	Gianna Bell-Eunice	Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for manual steps	products: invalid values ['sgNIPT']
LOPS-7763	Story	Verified	Michael Livingston	Update the validation against creating child samples when unreleasing and releasing	products: invalid values ['sgNIPT']
LOPS-7759	Defect	Verified	Brandon Culver	sgNIPT LRPCR Samples Do Not Appear in Queue for parallel Gene Assay	products: invalid values ['sgNIPT']
LOPS-7754	Defect	Verified	Michael Livingston	The CfDna Pool Quant Worklist generated with duplication of the same pool 4 times	products: invalid values ['sgNIPT']
LOPS-7751	Story	Verified	Kathy Dao	Update Equipment types and Counts for TM sgNIPT cfDNA PostLig Pur RunDetails	products: invalid values ['sgNIPT']
LOPS-7738	Story	Verified	Mehmet Ali Eken	Update Master Mix lot picker to allow "in-line valid" status	products: invalid values ['sgNIPT']
LOPS-7736	Defect	Closed	—	Creating reagents mix has error: Failed to adjust container amount. Check the use amount and units.	products: invalid values ['sgNIPT']
LOPS-7732	Tweak	Verified	Brandon Culver	Update 'sgNIPT gDNA Sequencing Run' plate suffix with "-PBSP"	products: invalid values ['sgNIPT']
LOPS-7726	Task	Closed	Mai Ton-Nu	Create SQL Script for Reagent Clean-up	products: invalid values ['sgNIPT']
LOPS-7724	Task	Closed	Mai Ton-Nu	Preparing Local Environment for Iso/Extraction Demo	products: empty
LOPS-7720	Story	Closed	Kathy Dao	Update reagent type in HC step	products: invalid values ['sgNIPT']
LOPS-7710	Story	Verified	Mai Ton-Nu	Add additional reagents to HC Day 1 Master Mix	products: invalid values ['sgNIPT']
LOPS-7709	Story	Verified	Kathy Dao	Update sgNIPT gDNA Pool Dilution RunDetails TM Consumable and Instrument Assignments	products: invalid values ['sgNIPT']
LOPS-7705	Tweak	Verified	Mehmet Ali Eken	gDNA LR-PCR Quant and Pooling worklist button ids are mixed up	products: invalid values ['sgNIPT']
LOPS-7704	Task	Closed	Kathy Dao	Import Instruments from WES/WGS PROD into sgNIPT Prod	products: invalid values ['sgNIPT']
LOPS-7697	Defect	Closed	Brandon Culver	LR-PCR Quant Plating is not parsing/populating Zone Data Entry fields	products: invalid values ['sgNIPT']
LOPS-7696	Story	Verified	Brandon Culver	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ genes.	products: invalid values ['sgNIPT']
LOPS-7685	Defect	Verified	Brandon Culver	gDNA Norm runlog is not processing due to column headers	products: invalid values ['sgNIPT']
LOPS-7676	Task	Closed	Bob Ruff	sgNIPT LOPS is not Producing Kafka Messages	products: empty
LOPS-7675	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for Missing NTC Sample	products: invalid values ['sgNIPT']
LOPS-7674	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for NTC Sample Presence in Available Lots	products: invalid values ['sgNIPT']
LOPS-7671	Task	Closed	Brandon Culver	Provide LOPS sgnipt UI and DB access for Arun	products: invalid values ['sgNIPT']
LOPS-7642	Story	Closed	Deon Hughes	Grant -a access for EPS and some LOPS members	products: invalid values ['sgNIPT']
LOPS-7575	Defect	Verified	Lev Evstratov	Failed to process action 'ProcessResultAction'. Reason: null when processing Normalization rundata	products: invalid values ['sgNIPT']
LOPS-7553	Task	Closed	Michael Livingston	Failed to check data. Failed to process action 'EnterDataItem'. Reason: Illegal attempt to update a released calculated	products: empty
LOPS-7551	Defect	Closed	Michael Livingston	gDNA Normalization runlog is not processing.	products: invalid values ['sgNIPT']
LOPS-7538	Sub-task	Closed	Lev Evstratov	Rework scenario for runlog integration service	products: invalid values ['sgNIPT']
LOPS-7537	Sub-task	Closed	Lev Evstratov	Adjust runlog processors to process rundata from transaction table (u_intftransobject)	products: invalid values ['sgNIPT']
LOPS-7535	Defect	Closed	Lev Evstratov	Samples are not available in the Sample List after received via API. Plasma Isolation Worklist cannot be generated.	products: invalid values ['sgNIPT']
LOPS-7526	Task	Closed	Brandon Culver	Update CODEOWNER permissions	products: invalid values ['sgNIPT']
LOPS-7510	Task	Closed	Gianna Bell-Eunice	shakedown support - PROD - verso worklist	products: empty
LOPS-7491	Task	Closed	Brandon Culver	Update Assay Request Message Schema version from 19 to 21	products: invalid values ['sgNIPT']
LOPS-7464	Task	Closed	Laura Dietrick	Import Lab Ops Users to sgNIPT Prod	products: invalid values ['sgNIPT']
LOPS-7462	Defect	Closed	Michael Livingston	Sample List is empty no samples available	products: invalid values ['sgNIPT']
LOPS-7447	Story	Verified	Lev Evstratov	Update array id prefix to FFPla	products: invalid values ['sgNIPT']
LOPS-7439	Defect	Closed	—	QC Review page is not loading	products: invalid values ['sgNIPT']
LOPS-7407	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.1.0	products: empty
LOPS-7405	Task	Closed	Bob Ruff	Deploy sgNIPT M1 to daybeforedeploy-01 Environment	products: empty
LOPS-7384	Task	Closed	Mai Ton-Nu	Prepare Staging-802 Environment for Demo	products: empty
LOPS-7373	Defect	Closed	Brandon Culver	Add REST role to all Actions (MD update)	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7368	Task	Closed	Gianna Bell-Eunice	release management tasks	products: empty
LOPS-7367	Task	Closed	Gianna Bell-Eunice	redeploy LabVantage Workflows to oncpspcintegration-01	products: empty
LOPS-7364	Task	Closed	—	Add illumina sequencers master data	products: invalid values ['sgNIPT']
LOPS-7343	Story	Closed	Gianna Bell-Eunice	Restrict "take custody" to just lab managers/supervisors	products: invalid values ['sgNIPT']
LOPS-7330	Task	Closed	Mai Ton-Nu	Investigate EPS - Max Rows Retrieved for Consumable Lots & Multi Scan	products: invalid values ['sgNIPT']
LOPS-7328	Story	Verified	Laura Dietrick	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	products: invalid values ['sgNIPT']
LOPS-7326	Task	Closed	Laura Dietrick	Create intf_lops_user account and password for sgNIPT PROD account	products: invalid values ['sgNIPT']
LOPS-7314	Defect	Verified	Michael Livingston	cfDNA Hybrid (Day 1) Worklist returns SourcePosition: E04 instead of SourcePosition: F05 .	products: invalid values ['sgNIPT']
LOPS-7298	Task	Closed	Bob Ruff	Deploy sgNIPT to Standalone Integration Instances	products: invalid values ['sgNIPT']
LOPS-7288	Task	Closed	—	SgNIPT Automated Regression for 1.0.0.0	products: empty
LOPS-7245	Defect	Verified	Michael Livingston	Cannot See trackitems during lot master mix creation	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7244	Defect	Verified	Michael Livingston	Plasma Manual Isolation-Child sample created without Barcode after TM is completed	products: invalid values ['sgNIPT']
LOPS-7239	Task	Closed	Michael Livingston	E2E Issue creating master mix	products: empty
LOPS-7238	Story	Verified	Lev Evstratov	Update System Transaction Types to only process sgNIPT messages	products: invalid values ['sgNIPT']
LOPS-7222	Task	Closed	Michael Livingston	Investigate shakedown issue with missing verso retrieval worklist	products: empty
LOPS-7206	Defect	Verified	Michael Livingston	The name of the LR-PCR Pooling Worklist is incorrect.	products: invalid values ['sgNIPT']
LOPS-7199	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 45	products: invalid values ['sgNIPT']
LOPS-7197	Task	Closed	Kathy Dao	Design and Investigate for Side Bar	products: empty
LOPS-7193	Task	Closed	Mai Ton-Nu	Design and Investigate for Side Bar (Demo)	products: empty
LOPS-7188	Defect	Verified	Michael Livingston	Incorrect Dataset Status PendingAutoAppEval After Releasing/Unreleasing with Auto-Approval Enabled	products: invalid values ['sgNIPT']
LOPS-7187	Story	Closed	Brandon Culver	Update Well Position Formatting (Padded Zeros) for Worklists - Iso/Ext	products: invalid values ['sgNIPT']
LOPS-7169	Story	Verified	Catalin Parvana	Test only: LOPS fails to process ARM message if Measurement is not present in SamRep	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7128	Task	Closed	—	Assess passwords for Prod and Non-Prod integration/api users	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-7125	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.2.1.0	products: empty
LOPS-7119	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC Reports	products: invalid values ['sgNIPT']
LOPS-7118	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC	products: invalid values ['sgNIPT']
LOPS-7112	Story	Verified	Michael Livingston	Cherrypick shared functionality from tfMRD - Plasma Isolation	products: invalid values ['sgNIPT']
LOPS-7102	Story	Verified	Brandon Culver	Refactor PlateToRackNormalizationProcessor to not use deprecated ParamData pojo	products: invalid values ['sgNIPT']
LOPS-7092	Story	Verified	Mehmet Ali Eken	cfDNA Rework Scenario Handling (Pool Quant)	products: invalid values ['sgNIPT']
LOPS-7090	Tweak	Verified	Kathy Dao	Master Data Clean Up	products: invalid values ['sgNIPT']
LOPS-7089	Task	Closed	—	Disable the OOTB stats logging in LOPS	products: invalid values ['sgNIPT']
LOPS-7063	Task	Closed	Catalin Parvana	New Kafka ARM consumer group for sgNIPT stage	products: invalid values ['sgNIPT']
LOPS-7062	Task	Closed	Lev Evstratov	RIR integration(API)	products: invalid values ['sgNIPT']
LOPS-7061	Task	Closed	Lev Evstratov	Separate LOPS Integration - Pipe Sequencing Complete - Test Only	products: invalid values ['sgNIPT']
LOPS-7060	Story	Closed	Lev Evstratov	Separate LOPS Integration - SamRep	products: invalid values ['sgNIPT']
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	products: invalid values ['sgNIPT']
LOPS-7058	Story	Verified	Laura Dietrick	Globally unique keys for sgNIPT	products: invalid values ['sgNIPT']
LOPS-7057	Task	Closed	Brandon Culver	Separate LOPS Integration - Active Directory	products: invalid values ['sgNIPT']
LOPS-7055	Sub-task	Closed	Lev Evstratov	Separate LOPS Integration - File Shares	products: invalid values ['sgNIPT']
LOPS-7054	Task	Closed	Lev Evstratov	Separate LOPS Integration - Pipe Sequencing Analysis Complete	products: invalid values ['sgNIPT']
LOPS-7053	Story	Closed	—	Separate LOPS Integration - Pipe Sequencing Manifest	products: invalid values ['sgNIPT']
LOPS-7050	Story	Closed	—	New Kafka ARM consumer group for sgNIPT Prod	products: invalid values ['sgNIPT']
LOPS-7049	Task	Closed	—	Spike: When to fork the separate repo	products: empty
LOPS-7048	Task	Closed	—	Spike: Branch and Merge Strategy between Products	products: invalid values ['sgNIPT']
LOPS-7047	Defect	Verified	Mehmet Ali Eken	sgNIPT cfDNA Hybridization worklist cannot be downloaded for cfDNA Rework Scenario.	products: invalid values ['sgNIPT']
LOPS-7031	Task	Closed	Mai Ton-Nu	E2E: Complete Iso/Ext for 935680575.2-2-BMS	products: empty
LOPS-7029	Task	Closed	Ize Imai	Hotfix (1.2.0.2) Follow manual steps in LOPS prod per attached confluence page	products: invalid values ['sgNIPT']
LOPS-7023	Task	Closed	Brandon Culver	Create sgNIPT-specific repo branches	products: invalid values ['sgNIPT']
LOPS-7020	Task	Closed	Brandon Culver	Configure LabVantage on Production sgNIPT RDS Instance	products: empty
LOPS-7017	Story	Verified	Mai Ton-Nu	Hide non-sgNIPT specific buttons on the QC Batch and Historical QC Batch List pages	products: invalid values ['sgNIPT']
LOPS-7007	Defect	Closed	Michael Livingston	LR-PCR Quant worklist cannot be generated due to missing barcoding plates in the list.	products: invalid values ['sgNIPT']
LOPS-7004	Defect	Closed	Mehmet Ali Eken	Results from Quant Plate to Source Plate cannot be promoted	products: invalid values ['sgNIPT']
LOPS-6997	Task	Closed	—	Test Only: Assay 44 in new sgNIPT prod instance	products: invalid values ['sgNIPT']
LOPS-6996	Task	Closed	Kavya Sampelli	Test Only: Assay 43 in new sgNIPT prod instance	products: invalid values ['sgNIPT']
LOPS-6995	Task	Closed	Kavya Sampelli	Test Only: Assay 41 in new sgNIPT prod instance	products: invalid values ['sgNIPT']
LOPS-6987	Story	Verified	Laura Dietrick	Hide non-sgNIPT specific buttons on the Boxes List page	products: invalid values ['sgNIPT']
LOPS-6984	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on the Manage Samples List page	products: invalid values ['sgNIPT']
LOPS-6983	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Historical Plates and Gels page	products: invalid values ['sgNIPT']
LOPS-6982	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Plates and Gels page	products: invalid values ['sgNIPT']
LOPS-6980	Task	Closed	Ize Imai	LOPS Prod Support - Fix Plasma Samples stuck in Pending AutoApprEval (EPS-117139)	products: empty
LOPS-6978	Defect	Verified	Brandon Culver	sgNIPT gDNA Sequencing Run and sgNIPT cfDNA Sequencing Run are failing.	products: invalid values ['sgNIPT']
LOPS-6977	Story	Verified	Lev Evstratov	Create the pipeline for instrument integration runlogs	products: invalid values ['sgNIPT']
LOPS-6976	Task	Closed	Lev Evstratov	Create MVP Runlog Microservice	products: empty
LOPS-6975	Story	Verified	Lev Evstratov	Update sgnipt worklist policies for folder hierarchy	products: invalid values ['sgNIPT']
LOPS-6968	Task	Closed	Mai Ton-Nu	Spike - check all LOPS files to ensure we use padded zero any time the number <10.	products: invalid values ['sgNIPT']
LOPS-6967	Task	Closed	Gianna Bell-Eunice	Spike - investigate QCB issue from shakedown	products: invalid values ['sgNIPT']
LOPS-6965	Task	Closed	Gianna Bell-Eunice	Deploy to gsp-integration01 environment	products: empty
LOPS-6955	Defect	Verified	Brandon Culver	gDNA Pool Purification and gDNA Library Prep worklists return number of samples instead of number of pools.	products: invalid values ['sgNIPT']
LOPS-6953	Story	Closed	Michael Livingston	Remove control from failed half plate (cfDNA Postlib Quant)	products: invalid values ['sgNIPT']
LOPS-6950	Task	Closed	Gianna Bell-Eunice	Deploy to pspcdaybefore environment	products: empty
LOPS-6948	Task	Closed	Gianna Bell-Eunice	Spike - investigate control swaps in array	products: empty
LOPS-6941	Task	Closed	Brandon Culver	LOPS Prod Support - Fix Plasma Samples stuck in Pending AutoApprEval	products: empty
LOPS-6938	Defect	Closed	Michael Livingston	Wrong number of samples and sample positions are returned in the Worklist.	products: invalid values ['sgNIPT']
LOPS-6936	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 44	products: invalid values ['sgNIPT']
LOPS-6932	Task	Closed	Gianna Bell-Eunice	Deploy release to labxe2e-01 environment	products: empty
LOPS-6930	Task	Closed	Gianna Bell-Eunice	Deploy release to labxe2e-01 environment	products: empty
LOPS-6929	Task	Closed	—	Samples that have not yet been received should not appear on plasma iso worklist	products: invalid values ['sgNIPT']
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	products: invalid values ['sgNIPT']
LOPS-6921	Story	Verified	Michael Livingston	Allow LOPS to check output tube barcode for cfDNA extraction	products: invalid values ['sgNIPT']
LOPS-6918	Task	Closed	—	LabVantage licenses for separate LOPS instances	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6914	Task	Closed	Gianna Bell-Eunice	Redeploy hotfix release to sgniptintegration-02 with database refresh	products: empty
LOPS-6896	Defect	Verified	Michael Livingston	sgNIPT cfDNA Pool Quant Plating runlog doesn't create cfDNA Pool Quant Plate.	products: invalid values ['sgNIPT']
LOPS-6888	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.2.0.2 hotfix	products: empty
LOPS-6887	Task	Closed	Mai Ton-Nu	Creation of Verso in LOPS production with EQ-607223	products: empty
LOPS-6885	Story	Closed	Howard LaHurreau	Spike - investigate impact to reagent validation and instrument integration with split prod instances	products: invalid values ['sgNIPT']
LOPS-6883	Task	Closed	Deon Hughes	Create api user id for automation scripts to use	products: empty
LOPS-6882	Task	Closed	Gianna Bell-Eunice	Deploy hotfix release branch to sgnipt-integration-02 environment	products: invalid values ['sgNIPT']
LOPS-6878	Task	Closed	Kathy Dao	Update and Enable Users in LOPS Prod	products: empty
LOPS-6877	Task	Closed	Mai Ton-Nu	Add Equipment ID EQ-607454 to LOPS Prod	products: invalid values ['sgNIPT']
LOPS-6858	Task	Closed	Mearat Hou	Spike: Investigate slow responsiveness with Reagent API.	products: invalid values ['sgNIPT']
LOPS-6856	Task	Closed	Ize Imai	Follow manual steps in LOPS prod per attached confluence page	products: invalid values ['sgNIPT']
LOPS-6850	Defect	Verified	Michael Livingston	gDNA LR-PCR Quant Worklist can generate the worklist for Quant Plates.	products: invalid values ['sgNIPT']
LOPS-6848	Tweak	Verified	Michael Livingston	gDNA LR-PCR Quant and Pooling worklist button ids are mixed up	products: invalid values ['sgNIPT']
LOPS-6838	Task	Closed	Gianna Bell-Eunice	Create new reagent types in LOPS	products: invalid values ['sgNIPT']
LOPS-6829	Task	Closed	Sri Gorantla	Move reagent type objects out of lv_exported into lv_exported_init	products: invalid values ['sgNIPT']
LOPS-6827	Defect	Verified	Mehmet Ali Eken	Assay-45 is not processing if Assay-44 is Failed.	products: invalid values ['sgNIPT']
LOPS-6822	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 43	products: invalid values ['sgNIPT']
LOPS-6821	Task	Closed	Kathy Dao	Update reagent lot status for sgNIPT shakedown and launch	products: empty
LOPS-6819	Defect	Verified	Brandon Culver	LRPCR Controls not appearing in Assay QC - Controls Analysis Review	products: invalid values ['sgNIPT']
LOPS-6818	Defect	Verified	Mehmet Ali Eken	Wrong Jasper report generated for gDNA samples that received > 1 LRPCR request	products: invalid values ['sgNIPT']
LOPS-6816	Defect	Verified	Lev Evstratov	Pipeline Results Not Ignored for Dispositioned Assays	products: invalid values ['sgNIPT']
LOPS-6809	Defect	Verified	Brandon Culver	LRPCR Pipeline Launch Request Fails When Samples Are in Multiple Wells	products: invalid values ['sgNIPT']
LOPS-6804	Story	Verified	Michael Livingston	gDNA Rework Scenario Handling (gDNA Pool Quant Review)	products: invalid values ['sgNIPT']
LOPS-6783	Task	Closed	Bob Ruff	Reagent data query for e2e - Mike Niemuth	products: invalid values ['sgNIPT']
LOPS-6782	Tweak	Verified	Lev Evstratov	CloudConfigClient need to include environment related headers	products: invalid values ['sgNIPT']
LOPS-6777	Story	Verified	Michael Livingston	Update sgNIPT Plasma Isolation PL	products: invalid values ['sgNIPT']
LOPS-6774	Task	Closed	Mai Ton-Nu	Test Only: Releasing and unreleasing results with auto-approval	products: invalid values ['sgNIPT']
LOPS-6769	Story	Verified	Michael Livingston	Add u_containerbarcode field to the container tab on the reagent lot view page	products: invalid values ['Other', 'sgNIPT']
LOPS-6764	Story	Verified	Lev Evstratov	Temporary override of using a cloud server for authentication credentials	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6737	Tweak	Verified	Ize Imai	Add sgNIPT gDNA LibPrep Nuclease Treatment to order.txt file	products: invalid values ['sgNIPT']
LOPS-6716	Task	Closed	Catalin Parvana	PSPC Daybeforedeploy regression	products: empty
LOPS-6713	Story	Verified	Brandon Culver	Search by Natera Barcode and Plate barcode on file sample page	products: invalid values ['sgNIPT']
LOPS-6709	Task	Closed	Kathy Dao	Need to re-export LV_ReagentLotMaint after reducing the list of roles.	products: empty
LOPS-6708	Task	Closed	Catalin Parvana	sgNIPT PSPC integration - Investigate ASSAY-00041 Processing Failures	products: invalid values ['sgNIPT']
LOPS-6699	Defect	Closed	—	Gene Specific Config missing : sgNIPT AM - sgNIPT gDNA GENE LR-PCR Barcoding - 1	products: invalid values ['sgNIPT']
LOPS-6697	Task	Closed	Michael Livingston	Update NR0701 & NR0541 reagent type in repository	products: invalid values ['Signatera WES']
LOPS-6687	Defect	Verified	Michael Livingston	e2e: Upload runlog file issue with Retest plasma isolation 2nd instance	products: invalid values ['sgNIPT']
LOPS-6686	Defect	Verified	Michael Livingston	Rework for LRPCR: Ensure correct assays assigned	products: invalid values ['sgNIPT']
LOPS-6680	Defect	Verified	Brandon Culver	Rack to Plate Worklists displaying incorrect zero padding for wells with two-digit columns	products: invalid values ['sgNIPT']
LOPS-6678	Task	Closed	Vasilii Sevriugin	Configure Cloud Config for S3ClientPolicy and RestClientPolicy (PROD)	products: invalid values ['sgNIPT']
LOPS-6676	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 42	products: invalid values ['sgNIPT']
LOPS-6666	Task	Closed	Deon Hughes	Deploy LOPS 1.2.0.0 to LOPS PROD - sgNIPT Release 1	products: invalid values ['sgNIPT']
LOPS-6665	Task	Closed	Gianna Bell-Eunice	Deploy to PSPC environment (5/5/2025)	products: invalid values ['sgNIPT']
LOPS-6657	Task	Closed	Deon Hughes	Update NAT-810354	products: invalid values ['sgNIPT']
LOPS-6655	Task	Closed	—	Import reagents from 1.0 for launch	products: invalid values ['sgNIPT']
LOPS-6654	Task	Closed	Ize Imai	Test Only: Event plan not triggering correctly during retest	products: invalid values ['sgNIPT']
LOPS-6647	Task	Closed	Catalin Parvana	Include 'daily' env name into list for labworkflow Kafka schema register - register-schemas.sh	products: invalid values ['Other']
LOPS-6644	Story	Verified	Kathy Dao	Create new Group TM for sgNIPT cfDNA Pool Quant Process	products: invalid values ['sgNIPT']
LOPS-6639	Task	Closed	Mai Ton-Nu	sgNIPT Regression Testing - Mai	products: invalid values ['sgNIPT']
LOPS-6638	Task	Closed	Laura Dietrick	sgNIPT Regression Testing - Laura	products: invalid values ['sgNIPT']
LOPS-6637	Task	Closed	Krishna Tanuku	sgNIPT Regression Testing - Krishna	products: invalid values ['sgNIPT']
LOPS-6636	Task	Closed	Gianna Bell-Eunice	sgNIPT Regression Testing - Gianna	products: invalid values ['sgNIPT']
LOPS-6635	Task	Closed	Sri Gorantla	sgNIPT Regression Testing - Sri	products: invalid values ['sgNIPT']
LOPS-6634	Task	Closed	Olawale Dada	sgNIPT Regression Testing - Wale	products: invalid values ['sgNIPT']
LOPS-6633	Task	Closed	Mai Ton-Nu	sgNIPT Regression Test Planning - Mai	products: invalid values ['sgNIPT']
LOPS-6632	Task	Closed	Laura Dietrick	sgNIPT Regression Test Planning - Laura	products: invalid values ['sgNIPT']
LOPS-6631	Task	Closed	Krishna Tanuku	sgNIPT Regression Test Planning - Krishna	products: invalid values ['sgNIPT']
LOPS-6630	Task	Closed	Gianna Bell-Eunice	sgNIPT Regression Test Planning - Gianna	products: invalid values ['sgNIPT']
LOPS-6629	Task	Closed	Sri Gorantla	sgNIPT Regression Test Planning - Sri	products: invalid values ['sgNIPT']
LOPS-6628	Defect	Verified	Mehmet Ali Eken	cfDNA Extraction rundata PL is truncating leading zeros from matrix barcodes	products: invalid values ['sgNIPT']
LOPS-6627	Task	Closed	Olawale Dada	sgNIPT Regression Test Planning - Wale	products: invalid values ['sgNIPT']
LOPS-6626	Defect	Verified	Krishna Tanuku	HBA Primer Plate 1 Mapping is incorrect	products: invalid values ['sgNIPT']
LOPS-6605	Task	Closed	Brandon Culver	Update rsync props to fix db stability	products: invalid values ['sgNIPT']
LOPS-6603	Defect	Verified	Lev Evstratov	sgNIPT: Assay 43: cfDNA Post Library Prep Quantification - Uploading a quant results file doesn't release sample dataset	products: invalid values ['sgNIPT']
LOPS-6597	Defect	Verified	Ize Imai	SgniptTransferToGDNASequencingRunArray Action does not create transfer record for the creation of the seqrun plate	products: invalid values ['sgNIPT']
LOPS-6596	Task	Closed	Vasilii Sevriugin	Spike - Instrument integration framework	products: invalid values ['sgNIPT']
LOPS-6594	Defect	Closed	Michael Livingston	sgNIPT LRPCR (gDNA) Sequencing Run Complete message is not processed	products: invalid values ['sgNIPT']
LOPS-6589	Story	Verified	Michael Livingston	Residual Quant should not require approvals.	products: invalid values ['sgNIPT']
LOPS-6588	Defect	Verified	Michael Livingston	Issue with the parent sample status not syncing from completed to inprogress.	products: invalid values ['sgNIPT']
LOPS-6586	Defect	Verified	Mehmet Ali Eken	sgNipt: Assay 44 - Well content is not unloaded from Source Wells during gDna Library Prep runlog processings	products: invalid values ['sgNIPT']
LOPS-6585	Defect	Verified	Michael Livingston	sgNipt: Assay 44 - Error creating LRPCR Sequencing Manifest (CONNECT BY loop in user data)	products: invalid values ['sgNIPT']
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	products: invalid values ['sgNIPT']
LOPS-6574	Story	Verified	Ize Imai	QC Review Quant Files need to accept mew character	products: invalid values ['sgNIPT']
LOPS-6573	Story	Verified	Vasilii Sevriugin	Update worklist generated filename to include seconds	products: invalid values ['sgNIPT']
LOPS-6570	Tweak	Verified	Krishna Tanuku	Move sgNIPT cfDNA Residual Quant Racking worklist policy node to correct parent node folder	products: invalid values ['sgNIPT']
LOPS-6569	Defect	Verified	Ray Ward	sgNipt: Assay 44 - Error processing 'sgNIPT gDNA Library Prep' runlog	products: invalid values ['sgNIPT']
LOPS-6568	Story	Verified	Sri Gorantla	Re-implement ticket that was reverted	products: invalid values ['sgNIPT']
LOPS-6567	Tweak	Verified	Brandon Culver	Update format of runDate param on sgNIPT gDNA Sequencing Run rundetails to yyyymmdd	products: invalid values ['sgNIPT']
LOPS-6566	Story	Verified	Ize Imai	Update Capture Worklist for partial Plate use case	products: invalid values ['sgNIPT']
LOPS-6564	Story	Verified	Bob Ruff	SMRT Link issues	products: invalid values ['sgNIPT']
LOPS-6563	Story	Verified	Brandon Culver	RunLogConfigPolicy node for step with expected plate suffix -LRPOOLQ	products: invalid values ['sgNIPT']
LOPS-6561	Story	Verified	Lev Evstratov	CFTR Rack Array Layout for positions E01, E02 and E03 must be left blank.	products: invalid values ['sgNIPT']
LOPS-6556	Defect	Verified	Krishna Tanuku	sgNIPT gDNA Pool Dilution volume calculation update	products: invalid values ['sgNIPT']
LOPS-6552	Task	Closed	Brandon Culver	Deploy release to e2e environment	products: empty
LOPS-6551	Defect	Verified	Vasilii Sevriugin	INTF Errors	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6547	Defect	Verified	Kathy Dao	Config to post Initial Assays-43 and 44 is missing.	products: invalid values ['sgNIPT']
LOPS-6545	Task	Closed	Gianna Bell-Eunice	Deploy to sgNIPTintegration-02 environment	products: invalid values ['sgNIPT']
LOPS-6529	Task	Closed	Deon Hughes	PROD access for Hypercare Team	products: invalid values ['sgNIPT']
LOPS-6527	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 41	products: invalid values ['sgNIPT']
LOPS-6524	Task	Closed	Ray Ward	Support with sgNIPT e2e (Sprint 41)	products: invalid values ['sgNIPT']
LOPS-6523	Story	Verified	Mehmet Ali Eken	Reimplement - Allow sample rework from Assay QC	products: invalid values ['sgNIPT']
LOPS-6522	Story	Verified	Michael Livingston	Reimplement - Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	products: invalid values ['sgNIPT']
LOPS-6521	Story	Verified	Sri Gorantla	Update gDNA Library Prep Worklist Policy Node names	products: invalid values ['sgNIPT']
LOPS-6520	Story	Verified	Ize Imai	Allow users to generate HBB Barcoding worklist with more than 1 assay	products: invalid values ['sgNIPT']
LOPS-6519	Story	Verified	Brandon Culver	Enable system to handle matrix gDNA samples queued for multiple assays	products: invalid values ['sgNIPT']
LOPS-6515	Defect	Verified	Lev Evstratov	Pass/Fail Assay buttons do not work when multiple samples are selected	products: invalid values ['sgNIPT']
LOPS-6512	Defect	Verified	Brandon Culver	sgNipt: Assay 44 - Barcoding workitems are not completed after barcoding runlog is processed	products: invalid values ['sgNIPT']
LOPS-6509	Story	Closed	Olawale Dada	Test only: (Assay-44 Testing)	products: invalid values ['sgNIPT']
LOPS-6508	Story	Closed	Gianna Bell-Eunice	Test only: (Assay-43 Testing)	products: invalid values ['sgNIPT']
LOPS-6507	Story	Verified	Brandon Culver	Update gDNA LR-PCR Pooling Worklist to include Controls	products: invalid values ['sgNIPT']
LOPS-6505	Task	Closed	Brandon Culver	sgNIPT E2E Support - LR-PCR	products: invalid values ['sgNIPT']
LOPS-6504	Defect	Verified	Brandon Culver	Update Barcoding Runlog Processing to plate the primer	products: invalid values ['sgNIPT']
LOPS-6503	Story	Verified	Ize Imai	Ability to generate worklist containing multiple plates for different gene types	products: invalid values ['sgNIPT']
LOPS-6497	Tweak	Verified	Mehmet Ali Eken	Update user login attempts setting to 10	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6490	Defect	Verified	Vasilii Sevriugin	LOPS doesn't send Assay-43 ASSAY_COMPLETED status message	products: invalid values ['sgNIPT']
LOPS-6489	Story	Verified	Mehmet Ali Eken	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ plates.	products: invalid values ['sgNIPT']
LOPS-6488	Defect	Verified	Ize Imai	sgNIPT Hybrid Capture (cfDNA) Pipe Launch Request runFolder is constructed incorrectly when Seq Run Complete v3 is proce	products: invalid values ['sgNIPT']
LOPS-6485	Story	Closed	Laura Dietrick	Test only: gDNA Retest from extractions (Assay-41)	products: invalid values ['sgNIPT']
LOPS-6481	Task	Closed	Ray Ward	Support with dryrun and e2e	products: empty
LOPS-6476	Task	Closed	—	Platform Automated Regression	products: invalid values ['sgNIPT']
LOPS-6475	Task	Closed	Vasilii Sevriugin	Configure datadog to record reagent validation api information	products: invalid values ['sgNIPT']
LOPS-6474	Task	Closed	—	Validate all new reagents have been created (or will be deployed) in production	products: empty
LOPS-6473	Defect	Verified	Vasilii Sevriugin	sgNIPT gDNA Pre-Extraction runlog is not processing.	products: invalid values ['sgNIPT']
LOPS-6472	Task	Closed	Vasilii Sevriugin	Deploy to PSPC and e2e environment	products: invalid values ['sgNIPT']
LOPS-6469	Task	Closed	Monish Grover	Troubleshoot PSPC Issue with automation failing	products: empty
LOPS-6468	Defect	Closed	Deon Hughes	CURRENTSTORAGEUNITID is not set for child samples	products: invalid values ['sgNIPT']
LOPS-6458	Task	Closed	Vasilii Sevriugin	Configure S3ClientPolicy and RestClientPolicy post deployment for E2E	products: invalid values ['sgNIPT']
LOPS-6454	Defect	Verified	Vasilii Sevriugin	sgNIPT Hybrid Capture (cfDNA) Pipeline Launch Request fails	products: invalid values ['sgNIPT']
LOPS-6442	Task	Closed	Amy Nguyen	KT session with LIS team on pipeline launch, seq run complete	products: invalid values ['sgNIPT']
LOPS-6441	Defect	Closed	Monish Grover	gDNA LR-PCR Quant Result - Sample QC(Evaluation) is not displayed on QC review after manual data entry changes	products: invalid values ['sgNIPT']
LOPS-6439	Defect	Verified	Brandon Culver	Give NtrJsonWorklistGenerator the ability to specify sample listing sort order	products: invalid values ['sgNIPT']
LOPS-6438	Task	Closed	Bob Ruff	Review sgnipt objects in production and document manual removals that need to be done for launch.	products: invalid values ['sgNIPT']
LOPS-6431	Task	Closed	Brandon Culver	Deploy current build to sgniptintegration-02 environment	products: empty
LOPS-6430	Story	Verified	Ray Ward	Update cfDNA barcode primer plates sequences in E2E environment	products: invalid values ['sgNIPT']
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	products: invalid values ['sgNIPT']
LOPS-6419	Task	Closed	Kathy Dao	Manual assay-44 testing in PSPC environment	products: invalid values ['sgNIPT']
LOPS-6418	Task	Closed	Vasilii Sevriugin	LRPCR Deploy update to labxe2e-01 environment	products: empty
LOPS-6416	Defect	Verified	Gianna Bell-Eunice	gDNA LR-PCR Plating is not getting assigned to the sample after gDNA LR-PCR Barcoding is completed.	products: invalid values ['sgNIPT']
LOPS-6415	Task	Closed	Vasilii Sevriugin	Manually Deactivate ITT000005 transaction type	products: invalid values ['sgNIPT']
LOPS-6408	Story	Verified	Gianna Bell-Eunice	New reagent and primer plate for HC	products: invalid values ['sgNIPT']
LOPS-6405	Task	Closed	Bob Ruff	Ensure transaction types for Illumina Sequencing Run Complete message are properly set to Active or Offline	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6403	Defect	Verified	Ize Imai	cfDNA Library Prep Racking spec always fails	products: invalid values ['sgNIPT']
LOPS-6402	Task	Closed	Ize Imai	Support PSPC Manual assay execution	products: invalid values ['sgNIPT']
LOPS-6399	Tweak	Verified	Brandon Culver	Update Rack Worklist RefType with cfDNA Racking TM	products: invalid values ['sgNIPT']
LOPS-6397	Defect	Closed	Ray Ward	sgNIPT cfDNA Residual Quant - Prohibit sample approval for the sample with failed Spec condition.	products: invalid values ['sgNIPT']
LOPS-6395	Task	Closed	Kathy Dao	Manual assay-43 testing in PSPC environment	products: invalid values ['sgNIPT']
LOPS-6394	Task	Closed	Catalin Parvana	Investigate PSPC Automation issues with assay-43	products: empty
LOPS-6393	Task	Closed	—	Updated list of WES / WGS manual test cases	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-6391	Sub-task	Closed	Ize Imai	Create IT for multi-gene LR-PCR scenario	products: invalid values ['sgNIPT']
LOPS-6388	Story	Verified	Vasilii Sevriugin	Update HybCap Day 2 Worklist Generation to have condensed positions for partial/half plate	products: invalid values ['sgNIPT']
LOPS-6387	Task	Closed	Gianna Bell-Eunice	Deploy latest sgNIPT build to PSPC environment	products: invalid values ['sgNIPT']
LOPS-6386	Story	Verified	Sri Gorantla	Allow Lab Ops Operators/Managers to edit array barcodes	products: invalid values ['sgNIPT']
LOPS-6383	Task	Closed	Catalin Parvana	Samples for Automation dry run (E2E)	products: empty
LOPS-6382	Story	Verified	Lev Evstratov	Need the ability to cherry pick individual retest samples	products: invalid values ['sgNIPT']
LOPS-6381	Task	Closed	Brandon Culver	sgNIPT E2E Support - Qubit Quant Plating	products: invalid values ['sgNIPT']
LOPS-6379	Story	Verified	Monish Grover	Master Data for gDNA Pool Quant Plating	products: invalid values ['sgNIPT']
LOPS-6377	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 40	products: invalid values ['sgNIPT']
LOPS-6376	Task	Closed	Kathy Dao	Document Assay-41 Rework	products: invalid values ['sgNIPT']
LOPS-6373	Defect	Verified	Lev Evstratov	Source Wells for HC in random order	products: invalid values ['sgNIPT']
LOPS-6371	Task	Closed	Klead Fusha	Make file storing generic in ProcessResultAction	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6367	Task	Closed	Mai Ton-Nu	Update NAT-802226 expected amount units to uL	products: invalid values ['sgNIPT']
LOPS-6366	Task	Closed	Ize Imai	Manually change the NtrWorklistGeneratorPolicy to fix HybCap Day 2 Worklist	products: invalid values ['sgNIPT']
LOPS-6358	Task	Closed	—	Add Amy and Elyssa to Prod	products: invalid values ['sgNIPT']
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	products: invalid values ['sgNIPT']
LOPS-6333	Defect	Verified	Ray Ward	Transfer method from sgNIPT gDNA Sequencing Prep Final Dilution to sgNIPT gDNA Sequencing Run creates a new plate with w	products: invalid values ['sgNIPT']
LOPS-6332	Defect	Closed	Ray Ward	Manual modification of worklist file	products: invalid values ['sgNIPT']
LOPS-6330	Task	Closed	—	sgNIPT Automated Regression	products: empty
LOPS-6326	Story	Verified	Ize Imai	Store Pool Concentration value in gDNA Pooling runlog to the resulting pooling array	products: invalid values ['sgNIPT']
LOPS-6316	Story	Verified	Sri Gorantla	cfDNA PostLib Quant review plate control calculations	products: invalid values ['sgNIPT']
LOPS-6315	Task	Closed	Jesus Zazueta	Refactor WorkList Policy Export Items to Individual Nodes	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6314	Task	Closed	Matt Smith	Refactor RunLog Policy Export Items to Individual Nodes	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6313	Defect	Verified	Mehmet Ali Eken	Control sample type is blank for Control Analysis Review page for sgNIPT gDNA samples	products: invalid values ['sgNIPT']
LOPS-6312	Defect	Verified	Lev Evstratov	sgNipt: Quant plate can't be found during quant file processing if first file processing failed	products: invalid values ['sgNIPT']
LOPS-6311	Story	Closed	Justin Jones	Ensure Extraction Managers are given Extraction Manager Job Type for Launch	products: invalid values ['sgNIPT']
LOPS-6310	Defect	Verified	Mehmet Ali Eken	sgNipt: cfDna Post Lib Prep Quant Results file processing fails for a plate with controls	products: invalid values ['sgNIPT']
LOPS-6302	Defect	Closed	Lev Evstratov	Flaky: LOPS failed to process sample - work item list is empty	products: invalid values ['sgNIPT']
LOPS-6295	Defect	Closed	Lev Evstratov	Flaky: LOPS DB Closed Connection Issue	products: invalid values ['sgNIPT']
LOPS-6293	Defect	Verified	Leonid Garin	Accept Partial Action at "QC Review gDNA Extraction Quantification" not updating passing samples "sgNIPT gDNA Extraction	products: invalid values ['sgNIPT']
LOPS-6287	Defect	Verified	Krishna Tanuku	Ligation AM applied and completed during prior A-Tailing runlog processing	products: invalid values ['sgNIPT']
LOPS-6282	Tweak	Verified	Brandon Culver	Update end repair runlog processor to look for trackitem.u_containerbarcode and not trackitem.u_barcode when processing	products: invalid values ['sgNIPT']
LOPS-6275	Defect	Verified	Ray Ward	Remove Sample barcode from HybCapDay1 worklist	products: invalid values ['sgNIPT']
LOPS-6246	Defect	Verified	Michael Livingston	Cancelled tests are preventing the assay from updating to Completed status	products: invalid values ['sgNIPT']
LOPS-6245	Task	Closed	Deon Hughes	Verify that all Extraction and Isolation users have the same security dept at the Verso instruments	products: invalid values ['sgNIPT']
LOPS-6228	Story	Verified	Ize Imai	Update sgNIPT Rack to Plate Loader class to find source or aliquot sample for downstream assays	products: invalid values ['sgNIPT']
LOPS-6227	Task	Closed	Mehmet Ali Eken	Evaluate and adjust labworkflows/lv_exported/Configuration/database/debezium_access.sql to be able to execute in product	products: invalid values ['sgNIPT']
LOPS-6219	Defect	Verified	Mai Ton-Nu	Pools listed in cfDNA Pool Dilution worklist are listed in reverse order and do not have padded zeros	products: invalid values ['sgNIPT']
LOPS-6210	Story	Verified	Ray Ward	Associate reagents and equipment to SDI Groups for Assay-00044	products: invalid values ['sgNIPT']
LOPS-6172	Story	Verified	Krishna Tanuku	Creation of New cfDNA Aliquots Residual Quant Racking MD and Updates to Assay Template	products: invalid values ['sgNIPT']
LOPS-6167	Story	Verified	Olawale Dada	Creation of New cfDNA Aliquots Library Prep Racking MD and Updates to Assay Template	products: invalid values ['sgNIPT']
LOPS-6161	Story	Verified	Monish Grover	Add barcode scan to LV_TrackItemMultiLookup for easier and more compliant master mix process	products: invalid values ['sgNIPT']
LOPS-6141	Story	Verified	Leonid Garin	Support Assay Request Message v1.19 (Request Params)	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-6127	Tweak	Verified	Ray Ward	sgNIPT gDNA HBA LR-PCR Plating Variant is set to 1.	products: invalid values ['sgNIPT']
LOPS-6122	Story	Verified	Gianna Bell-Eunice	Creation of New gDNA Aliquots LR-PCR Racking MD and Updates to Assay Template	products: invalid values ['sgNIPT']
LOPS-6120	Tweak	Verified	Michael Livingston	Allow users to search for arrays that are in PIPE analysis	products: invalid values ['sgNIPT']
LOPS-6085	Sub-task	Closed	—	LOPS- 4410 - Update the specifications based on latest changes	products: empty
LOPS-6075	Story	Verified	Krishna Tanuku	Extraction Managers and Operators need access to the 'Add' button on the QCB list page.	products: invalid values ['sgNIPT']
LOPS-6067	Story	Verified	Swati Giri	Update ISO/EXT Child Barcode Calculations for 14mL and 15mL Plasma Samples	products: invalid values ['sgNIPT']
LOPS-6020	Story	Verified	Kathy Dao	LOPS can validate barcodes for a set of samples proceeding through plasma manual/partial isolation	products: invalid values ['sgNIPT']
LOPS-6000	Defect	Verified	Abdul Aziz	Extra 'Assay' option in filter menu	products: invalid values ['Signatera GHP']
LOPS-5997	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate and perform follow up actions as need	products: invalid values ['sgNIPT']
LOPS-5988	Task	Closed	Gianna Bell-Eunice	SPIKE - confirm that OOB functionality meets the requirements for assigning expiry dates based on Manufactured and recei	products: invalid values ['Other']
LOPS-5980	Story	Verified	Ize Imai	Generalize the implementation for Plate to Rack (gDNA Normalization)	products: invalid values ['sgNIPT']
LOPS-5975	Story	Verified	Vasilii Sevriugin	Missing a Loose Tube Loader that's able to perform by position load from RunLog	products: invalid values ['sgNIPT']
LOPS-5951	Tweak	Verified	Kathy Dao	MD Cleanup	products: invalid values ['sgNIPT']
LOPS-5942	Story	Closed	Laura Dietrick	Test only: cfDNA Retest from Assay QC scenarios	products: invalid values ['sgNIPT']
LOPS-5941	Story	Closed	Gianna Bell-Eunice	Test only: gDNA Retest from Assay QC scenarios	products: invalid values ['sgNIPT']
LOPS-5882	Defect	Closed	Joeseph Colca	Array method being set incorrectly for "Current Detail" which this fails generating SEQ plate	products: invalid values ['sgNIPT']
LOPS-5867	Sub-task	Closed	Hani Yakan	Change SourceRackBarcode to be SourceBarcode and SourceRackPosition to SourcePosition	products: empty
LOPS-5854	Sub-task	Closed	—	5 - Create Spec	products: empty
LOPS-5853	Sub-task	Closed	—	4 - Create MR	products: empty
LOPS-5852	Sub-task	Closed	—	3 - Implement	products: empty
LOPS-5851	Sub-task	Closed	—	2 - Create Branch	products: empty
LOPS-5850	Sub-task	Closed	—	1 - Link Requirements	products: empty
LOPS-5836	Story	Verified	Meghana Joshi	The system shall provide EPS Admins the ability to modify assay dispositions.	products: invalid values ['Signatera GHP', 'Signatera WES']
LOPS-5833	Story	Verified	Sri Gorantla	sgNIPT gDNA Pool Dilution volume calculation	products: invalid values ['sgNIPT']
LOPS-5827	Tweak	Verified	Mehmet Ali Eken	Refactor sgNIPT Sequencing Run Complete processors to only look for one sequencing array	products: invalid values ['sgNIPT']
LOPS-5815	Story	Verified	Michael Livingston	Samples that have not been received in LOPS should not appear in the plasma isolation worklist	products: invalid values ['sgNIPT']
LOPS-5785	Story	Verified	Lev Evstratov	Update logic for Overall Result in Assay QC Sample Analysis Review page	products: invalid values ['sgNIPT']
LOPS-5784	Story	Verified	Krishna Tanuku	Update color coding of metric evaluations (Assay QC reports)	products: invalid values ['sgNIPT']
LOPS-5783	Story	Verified	Lev Evstratov	Update pipeline-result processor to allow PASSED_WITH_WARNINGS to auto-disposition as Passed	products: invalid values ['sgNIPT']
LOPS-5720	Story	Closed	Monish Grover	Create worklists using column format (A01, B01, C01,...) to order samples when sourcewell is present	products: invalid values ['sgNIPT']
LOPS-5696	Story	Verified	Sri Gorantla	LOPS Support for E2E Residual Quant	products: invalid values ['sgNIPT']
LOPS-5651	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant)	products: invalid values ['sgNIPT']
LOPS-5648	Task	Closed	Gianna Bell-Eunice	Document LOPS entites/objects created and valid status of each for SQE Automation support	products: invalid values ['sgNIPT']
LOPS-5637	Story	Verified	Gianna Bell-Eunice	Associate reagents and equipment to MD for Assay-00043	products: invalid values ['sgNIPT']
LOPS-5627	Story	Verified	Mai Ton-Nu	Increase number of plates accepted in cfDNA Pool Quantification array and transfer method	products: invalid values ['sgNIPT']
LOPS-5525	Task	Closed	Kathy Dao	Document initial Assay-44 Happy Path Steps	products: invalid values ['sgNIPT']
LOPS-5504	Task	Closed	Deon Hughes	Create sgNIPT instruments in LOPS	products: invalid values ['sgNIPT']
LOPS-5387	Story	Verified	Sri Gorantla	Add u_containerbarcode field to the container tab on the reagent lot maint page	products: invalid values ['Other']
LOPS-5365	Sub-task	Closed	—	Evaluate test automation scripts for k8s build on integration env	products: invalid values ['Other']
LOPS-5322	Tweak	Verified	Krishna Tanuku	Remove LibPrep Quant test method, param list, spec	products: invalid values ['sgNIPT']
LOPS-5321	Story	Verified	Liubomyr Skorokhod	(Test only) gDNA sequencing manifest generation	products: invalid values ['sgNIPT']
LOPS-5305	Story	Verified	Ray Ward	The system must be able to support Biobankable workflow via sample disposal status	products: invalid values ['sgNIPT']
LOPS-5284	Sub-task	Closed	—	Evaluate test automation scripts for K8s on Staging-100	products: empty
LOPS-5280	Epic	Closed	Ariel Jirau	Epic to track work effort to migrate labworkflows workloads from Rancher to Kubernetes	products: invalid values ['sgNIPT', 'Signatera GHP', 'Signatera WES']
LOPS-5234	Story	Verified	Lev Evstratov	gDNA LR-PCR Pooling Worklist generation	products: invalid values ['sgNIPT']
LOPS-5176	Story	Verified	Alex Pakhunov	gDNA Pool Quant Results Integration - Tapestation Quant file import	products: invalid values ['sgNIPT']
LOPS-5084	Story	Verified	Ray Ward	gDNA LR-PCR Spectramax Quant Results Integration - Runlog Parsing	products: invalid values ['sgNIPT']
LOPS-4907	Story	Verified	Ize Imai	Allow LOPS to check PLM output tube barcode prior to proceeding with Isolation process	products: invalid values ['sgNIPT']
LOPS-4188	Story	Verified	Michael Livingston	Support re-use of a control from the same plate	products: invalid values ['sgNIPT']
LOPS-2778	Task	Closed	Bob Ruff	Pipeline integration query update (LOPS-PIPE new kafka messages from WES)	products: empty
LOPS-2734	Story	Verified	Jonathan Quinn	Support actions at cfDNA Extraction results review - cfDNA Manual Recovery	products: invalid values ['sgNIPT']
LOPS-2627	Story	Verified	Mehmet Ali Eken	LOPS Support of Proficiency samples	products: invalid values ['sgNIPT']
LOPS-2607	Story	Verified	Klead Fusha	SMRT Link - Run design template file generation	products: invalid values ['sgNIPT']
LOPS-2485	Story	Verified	Olawale Dada	Test only: gDNA downstream assay rework points	products: invalid values ['sgNIPT']
LOPS-2440	Defect	Verified	Dennis Lin	Capture Quant > Run Details - Reagents not validated as required	products: invalid values ['Signatera WES']
LOPS-2051	Task	Closed	Deon Hughes	Create new users for initial sgNIPT go-live	products: invalid values ['sgNIPT']
LOPS-1652	Story	Verified	Lev Evstratov	Notify SamRep that samples were disposed/biobanked	products: invalid values ['sgNIPT']

Missing TPM Assignee

WARNING 99.8% pass rate (9 violations / 4810 applicable)

All ticket types should have a TPM assignee. 'Unassigned' is treated as missing.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-57-20251202 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9344	Task	Closed	Valeria Vargas	Update CODEOWNERS file for labworkflows-LV repo	tpm_assignee: null

WESonX Sprint 26 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4027	Task	Closed	Swati Giri	Samples for Histopathology user practice: Week of 9/30/2024	tpm_assignee: null

LOPS WES/WGS 20251020 (54) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8989	Task	Closed	—	Fix WGS regression tests	tpm_assignee: null

LOPS tfMRD Sprint 6 (32) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5141	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Sequencing RunDetails	tpm_assignee: null

No Sprint Assigned (5 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-8958	Sub-task	Closed	Brandon Culver	Dev Testing - cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	tpm_assignee: null
LOPS-8907	Sub-task	Closed	Mehmet Ali Eken	Dev Testing - LOPS Support of QIP testing of control samples	tpm_assignee: null
LOPS-8797	Sub-task	Closed	Bob Ruff	Dev Testing - Add the ability to clear custody from trackitems	tpm_assignee: null
LOPS-8344	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing- Update Reagent Lot List pages New button/Queries	tpm_assignee: null
LOPS-8342	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for m	tpm_assignee: null

Missing or Invalid Fix Version

CRITICAL 2.1% pass rate (1691 violations / 1727 applicable)

Stories should have at least one fix version matching the expected pattern.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-49-20250811 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7381	Story	Closed	Mikhail Terpugov	Tracer Index when no tracers pipetted	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS-tfMRD-48-20250728 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7517	Story	Closed	Kersha Eddy	User needs to be able to select two Microplate Dispensers during selecting instruments on Size Selection 1 and Size Sele	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6181	Story	Closed	Isaac Vargas	Update Plates & Gels list page sequencing queries to Support tfMRD Array Method and Flow Cell ID Search	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 20250714 (47) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9620	Story	Closed	Monish Grover	GHPv2 - Extraction: Blood Sample Receipt Page	fix_versions: empty
LOPS-7530	Story	Closed	Monish Grover	Merger of LOPS-6732 to the WES/WGS 1.0.1.0 release	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7503	Story	Closed	Monish Grover	Extraction: WGS Extraction Samples Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7484	Story	Closed	—	Histology: WES Incidents Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7480	Story	Closed	—	Histology: WGS Dissection Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7478	Story	Closed	—	Histology: WES Pathology Review Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7476	Story	Closed	—	Histology: WGS H&E Staining Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7474	Story	Closed	—	Histology: WGS Embedding Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-6732	Story	Verified	Monish Grover	Active/Historical Array List Pages: Support Actions: Store, Dispose, UnStore, UnDispose	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)', 'WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-6145	Story	Verified	Dennis Lin	WES/GHP: Blood Extraction: Support 'Blood Extraction' Run Details Task	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)', 'WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-3300	Story	Verified	Monish Grover	WES/WGS: Tissue Extraction > Auto-Archive QC Batches based on Create Date	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)', 'WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']

LOPS-tfMRD-47-20250713 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7543	Story	Closed	Jonathan Quinn	Update Isolation and Extraction to stop users from continuing after failed barcode validation for manual steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7515	Story	Closed	Kersha Eddy	Add ability to find an already generated worklist	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7340	Story	Closed	Klead Fusha	Reject Action for Size Selection Quant	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7103	Story	Closed	Mikhail Terpugov	Update Samples Custodial Department to Austin upon Receiving of the Package	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7032	Story	Closed	Jonathan Quinn	Automatic policy for runlog tasks depending on webpage	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6989	Story	Closed	Hani Yakan	Mismatch detection for two different patient tubes associated with the same PLM/destination tube	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6892	Story	Closed	Klead Fusha	Enforce Pool Dilution validation so that the corresponding A/B suffix is required for the tfSEQ barcode	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6875	Story	Closed	Brad Garrett	Round Post-Pool Quant calculated concentration to 3 decimal places	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6873	Story	Closed	Brad Garrett	Round Sequencing Pool Dilution calculated concentration to one decimal point	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6684	Story	Closed	Brad Garrett	Allow users to enter in an override for 'Master Pool Quant' during Sequencing Pool Dilution	fix_versions: empty
LOPS-6659	Story	Closed	Mikhail Terpugov	Allow users to TNP samples from the unpack package page	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6538	Story	Closed	Hani Yakan	NOREAD in the isolation runlog files should be ignored	fix_versions: pattern mismatch ['tfMRD Go-Live: LOPS Platform']
LOPS-6390	Story	Closed	Klead Fusha	Pooling Selection for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS-tfMRD-46-20250630 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7532	Story	Closed	Mikhail Terpugov	Error Code 2 in isolation runlog file should be ignored	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7457	Story	Closed	Mikhail Terpugov	Ensure 1 tracer association per sample	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7069	Story	Closed	Vasiliy Kumaev	Add new "Remove Sample From Batch" button at Hybrid Capture Step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-7022	Story	Closed	Brad Garrett	Add streamlined Rework support to Assay QC landing page for run-level rework	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6940	Story	Closed	Mikhail Terpugov	Single cfDNA creation from Package endpoint request	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6870	Story	Closed	Klead Fusha	Post Amplification Quantification Updates	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6700	Story	Closed	Valeria Vargas	tfMRD Size Selection Re-Quant Plating and Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6669	Story	Closed	Valeria Vargas	Update metric results table in Assay QC Jasper reports	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6542	Story	Closed	Jonathan Quinn	Validate plate barcodes for manual steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6369	Story	Closed	Brad Garrett	Update LOPS pipeline results API response	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 20250630 (46) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7339	Story	Verified	Ray Ward	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	fix_versions: pattern mismatch ['WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-7285	Story	Closed	Ray Ward	Disabling the recording of event logs for the AddTrackItem event plan - code fix	fix_versions: pattern mismatch ['WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-7236	Story	Verified	Swati Giri	Update accessioning filtering - LOPS WES/WGS code fix	fix_versions: pattern mismatch ['WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-7235	Story	Closed	Swati Giri	Update accessioning filtering - LOPS WES/WGS production instance	fix_versions: pattern mismatch ['LOPS 1.2.0.5 (ePatch)']
LOPS-7234	Story	Verified	Ray Ward	Library QC performance improvements - code fix	fix_versions: pattern mismatch ['WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']

LOPS Sprint 20250616 (45) (24 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6899	Story	Closed	Dennis Lin	New Action Button - Setting of the rework reservation flag	fix_versions: empty
LOPS-6898	Story	Closed	Dennis Lin	New Page - Historical Normalization Re-Run Samples for the Extraction group	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-6852	Story	Closed	Vasiliy Kumaev	Add Validation to Ensure Test Method Is Assigned to Sample(s) Before Worklist Generation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6814	Story	Closed	Klead Fusha	Update Volumes after Post Lib Quant Prep (Plating) RunLog Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6796	Story	Closed	Dennis Lin	New Page - Normalization Re-Run Samples for the Extraction group	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-6762	Story	Closed	Jonathan Quinn	Enforcing mandatory parameters in Manual Workflow Steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6760	Story	Closed	Mikhail Terpugov	Revise Size Selection Sample Batching Functionality	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6736	Story	Closed	Vasiliy Kumaev	Account for Remaining Volume at Hybrid Capture Step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6695	Story	Closed	Klead Fusha	Filter failed batches from tfMRD Pool Prep - only display and transfer wells that passed	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6683	Story	Closed	Brad Garrett	Create Pool Dilution task to display transfer volumes and create -TFSEQ Tubes from TFPOOL tubes	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6668	Story	Closed	Brad Garrett	Assay QC UI - Control Level	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6667	Story	Closed	Brad Garrett	Assay QC UI - Sample Level	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6662	Story	Closed	Brad Garrett	Capture LOPS-PIPE Connector Response in Array Method Parameters	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6658	Story	Closed	Mikhail Terpugov	Consolidate Unpack + Verso Store steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6558	Story	Closed	Brad Garrett	Update Trigger Assay Auto-Disposition button to support runs without batch level metrics	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6502	Story	Closed	Klead Fusha	Update tfMRD LibPrep QC Review, to show only tfMRD exceptions	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6467	Story	Closed	Klead Fusha	ReQuant action during Pool Quant QC Review	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6446	Story	Closed	Mikhail Terpugov	Complete Parent Blood Sample from S2S Shipping	fix_versions: pattern mismatch ['tfMRD Go-Live: LOPS Platform']
LOPS-6297	Story	Closed	Valeria Vargas	Display Number of Samples with Unique Tracers At Quant Review step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5958	Story	Closed	Vasiliy Kumaev	Extend the rundata parser class to support parameter name mapping	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5547	Story	Closed	—	Rework Actions for Sequencing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation']
LOPS-5546	Story	Closed	Klead Fusha	Rework Actions for Pool Quant - Accept Partial and Reject	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4509	Story	Closed	Klead Fusha	Rework for Post Amplification Quantification (tfMRD LibPrep QC Review - ReQuant)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3924	Story	Closed	Brad Garrett	Assay QC UI - Run Level	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 20250602 (44) (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6946	Story	Closed	Klead Fusha	Update Worklist Generation for Post Amplification Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6806	Story	Closed	Valeria Vargas	Size Selection Quant Review Accept actions	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	fix_versions: empty
LOPS-6618	Story	Closed	Klead Fusha	tfMRD LibPrep QC Review One Batch Support	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6587	Story	Closed	Brad Garrett	Create TFPOOL tubes from Reviewed TFCAP plate	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6555	Story	Closed	Vasiliy Kumaev	Update tfMRD Pipeline Launch Request (sequencingSampleId and assayCode)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6428	Story	Closed	Vasiliy Kumaev	Update Specification for tfMRD Library Amplification Quant	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6426	Story	Closed	Vasiliy Kumaev	Worklist Generation Updates for Post-Capture Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6279	Story	Verified	Kevin Detweiler	WES: Standardize Sequencing Prep Task: Update 'Input/Output Plate Type'	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6278	Story	Verified	Kevin Detweiler	WES/GHP: Standardize Tissue DNA Extraction Task: Update 'Input/Output Plate Type'	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6242	Story	Verified	Dennis Lin	WES: Sequencing: Support 'Sequencing' Run Details Task	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6185	Story	Closed	Vasiliy Kumaev	Update RackToPlateMultiplePlatesLoader to distinguish controls from samples	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6111	Story	Closed	Ron Enson	Automation of the Ligation Purification KingFisher step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5752	Story	Closed	Mikhail Terpugov	Sample Queue Displayed Info	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5735	Story	Closed	Mikhail Terpugov	Sample Selection	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5702	Story	Closed	—	cfDNA PostLib Quant Plating (Hamilton Vantage)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform']
LOPS-5656	Story	Closed	Mikhail Terpugov	Batching Samples from Verso for tfMRD	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5578	Story	Verified	Dennis Lin	WES/GHP: Fragmentation: Support 'Fragmentation' Run Details Task	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5418	Story	Verified	Kevin Detweiler	Histo: Tissue Sample Return	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5086	Story	Ready for Development	Swati Giri	Map Exception Codes to WES Assay Templates	fix_versions: empty
LOPS-5066	Story	Opened	Isaac Vargas	Query what is currently stored inside Verso	fix_versions: pattern mismatch ['tfMRD LOPS Future Release']
LOPS-4431	Story	Closed	Ron Enson	Worklist Generation for Normalization	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4427	Story	Closed	Valeria Vargas	Runlog Processing for Size Selection Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 20250519 (43) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6853	Story	Verified	Swati Giri	Inclusion of LOPS-6703 in the LOPS 1.2.0.2 hotfix	fix_versions: pattern mismatch ['LOPS 1.2.0.2 (Hotfix for sgNIPT shakedown)']
LOPS-6641	Story	Verified	Ray Ward	WGS: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']

LOPS Sprint 20250505 (42) (31 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6703	Story	Verified	Kevin Detweiler	Provide Access to "Record Incident" Button on the Sample Pages	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6617	Story	Closed	Klead Fusha	Download Worklist - Hybridization - Set PoolNumber to 1 when Batch 2 is the only active batch on the plate	fix_versions: empty
LOPS-6609	Story	Verified	Swati Giri	WES/WGS: Tissue DNA Extraction: Record Water Reagent	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6559	Story	Closed	Klead Fusha	Track Remaining Volumes after Hybrid Capture RunLog Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6480	Story	Closed	Vasiliy Kumaev	Worklist Generation for Library Amplification Purification Update	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6400	Story	Closed	Brad Garrett	Accept Post-Pool Quant reading results	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6389	Story	Closed	Klead Fusha	tfMRD LibPrep QC Review	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6368	Story	Closed	Klead Fusha	Update Worklist Generation for Post Amplification Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6303	Story	Verified	Leonid Garin	Update WES and WGS Sequencing Run array method params to support v3 Sequencing Run Complete message	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6299	Story	Closed	Vasiliy Kumaev	Update Array Method for Post Amplification Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6288	Story	Verified	Abdul Aziz	Array List Pages: Support Search by Array Barcode	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6114	Story	Closed	Isaac Vargas	Automation of the Deamination Purification KingFisher step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5878	Story	Closed	Ron Enson	Update process controls 1,2,3	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5734	Story	Closed	Mikhail Terpugov	Association of Tracer	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5463	Story	Closed	Kersha Eddy	Runlog Processing for Second Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5456	Story	Closed	Vasiliy Kumaev	Runlog Processing for Library Amplification Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4714	Story	Verified	Dennis Lin	WES/GHP Tissue DNA Extraction > Run Details: Support 'Ethanol' Reagent Aliquot Part Number	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-4536	Story	Closed	Brad Garrett	Runlog Processing for Post-Pooling Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4533	Story	Closed	Joeseph Colca	Runlog Processing for Post-Pooling Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4530	Story	Closed	Joeseph Colca	Worklist Generation for Post-Pooling Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4511	Story	Closed	Klead Fusha	Worklist Generation for Hybrid Capture (Hybridization)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4507	Story	Closed	Vasiliy Kumaev	Runlog Processing for Post Amplification Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4501	Story	Closed	Hani Yakan	Worklist Generation for Post Amplification Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4493	Story	Closed	Vasiliy Kumaev	Runlog Processing for Library Amplification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4465	Story	Closed	Isaac Vargas	Runlog Processing for Methylation Oxidation Stop	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4447	Story	Closed	Isaac Vargas	Runlog Processing for Ligation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4434	Story	Closed	Isaac Vargas	Runlog Processing for Normalization	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4424	Story	Closed	Valeria Vargas	Runlog Processing for Size Selection Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4421	Story	Closed	Isaac Vargas	Worklist Generation for Size Selection Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4399	Story	Closed	Mikhail Terpugov	Worklist Generation for Retrieve from Verso	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation']
LOPS-2894	Story	Verified	Leonid Garin	Blood Extraction Results Review: Exclude Filler Samples from 'Fail and Re-Extract' Action	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']

LOPS Sprint 20250421 (41) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6492	Story	Closed	Klead Fusha	tfMRD LibPrep QC Review - ReQuant	fix_versions: empty
LOPS-6192	Story	Closed	Kersha Eddy	Update Params - Methylation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6146	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Tissue DNA Plate Barcode	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6142	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Run Details Completed	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6113	Story	Closed	Isaac Vargas	Automation of the Oxidation Purification KingFisher step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5983	Story	Verified	Kevin Detweiler	Plate List Page > WES Actions: Support Tasks for Plates in the WES Workflow (Test Only)	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5706	Story	Verified	Meghana Joshi	Support a way to view the Zone Data values for Historical Assay QC Arrays	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-4522	Story	Closed	Klead Fusha	Runlog Processing for Post-Capture Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4514	Story	Closed	Klead Fusha	Runlog Processing for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4504	Story	Closed	Klead Fusha	Runlog Processing for Post Amplification Quantification Plating	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4482	Story	Closed	Kersha Eddy	Runlog Processing for Deamination	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4475	Story	Closed	Ron Enson	Runlog Processing for Denaturation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4440	Story	Closed	Ron Enson	Runlog Processing for ER and A-Tailing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4407	Story	Closed	Ron Enson	Runlog Processing for Sample Plating and First Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 20250407 (40) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6144	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Sequencing Tube Barcode	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6143	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Run Details Completed	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6097	Story	Opened	—	Method for automatically transitioning QC batches from "Completed" to "Reviewed" based on TBD criteria	fix_versions: pattern mismatch ['tfMRD LOPS Future Release']
LOPS-5974	Story	Verified	Dennis Lin	Run Details: Support Plate as 'Input/Output'	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5907	Story	Verified	Dennis Lin	WES: Plate List Page > Update 'Create Run Details'	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5905	Story	In Grooming	Dennis Lin	WES: QC Batch List Page > WES Actions: Validate Task per Workflow Step for QC Batch	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-5793	Story	Closed	Isaac Vargas	Update Params - Normalization	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5727	Story	Closed	Ron Enson	Update Params - Lib Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5717	Story	Ready for Development	Abdul Aziz	Blood Extraction: Validate Blood Extraction DNA Plate Barcode	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)']
LOPS-5689	Story	Verified	Dennis Lin	Capture Quant: Support 'Capture Quant' Run Details Task	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5195	Story	Closed	Ron Enson	Array Method Reagents for Library Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5177	Story	Closed	Ron Enson	tfMRD Reagents Dec 18	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	fix_versions: empty
LOPS-4926	Story	Closed	Alex Pakhunov	Set tfmrd samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete message and in	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4852	Story	Closed	Meghana Joshi	Support Sequencing Run Complete message processing using the v2 topic	fix_versions: empty
LOPS-4458	Story	Closed	Kersha Eddy	Runlog Processing for Methylation Oxidation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4046	Story	Development Blocked	Ron Enson	Remove or Obsolete the LabOperator and LabSupervisor jobtypes in LOPS	fix_versions: empty
LOPS-2903	Story	Development Blocked	Hani Yakan	Extraction QC Review: Approve Plate > NOT Re-Queue Failed Blood Filler Samples for Blood Extraction (Test Only)	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']

LOPS Sprint 20250324 (39) (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6244	Story	Verified	Monish Grover	Update gDNA RunDesign csv file to populate Plate 1 field with unique plate serial number + lot number + expiry	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6216	Story	Verified	Olawale Dada	Update PacBio Sequencing Plate reagent to include fields to track Serial number, lot number and expiry	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6207	Story	Verified	Ray Ward	Update specification for sgNIPT gDNA Pool Tapestation quant	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6205	Story	Verified	Sri Gorantla	Update sgNIPT gDNA Pool Purification worklist to include SourceTube field and remove SourceWell	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6190	Story	Closed	Hani Yakan	Updates to the Size Selection Quant process to support the new design	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6135	Story	Verified	Krishna Tanuku	Update Array Zone Data Entry to sort by Array Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6119	Story	Verified	Kevin Detweiler	WES: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6110	Story	Closed	Surbhi Ray	Automation of the Size Selection 2 KingFisher step	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation']
LOPS-6098	Story	Verified	Ize Imai	expand column sort to apply to samples on plate OR rack	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6094	Story	Closed	Valeria Vargas	Remove rack validation from Verso storage	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5950	Story	Verified	Brandon Culver	Update RunDetail processing for hardcoded PL variant and paramtype issue	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5904	Story	Closed	Vasiliy Kumaev	Spike - investigate options for applying array layout after array creation	fix_versions: empty
LOPS-5846	Story	Closed	Isaac Vargas	Tracer sequences must be mapped to index	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5820	Story	Verified	Vasiliy Kumaev	Update Spectramax processor for result promotion to source array and Quant Plating AM and Quant Review AM creation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5799	Story	Verified	Meghana Joshi	Support for barcode validations when Pooling Tissue Slides	fix_versions: pattern mismatch ['LOPS 1.1.1.3 (hotfix hypercare)']
LOPS-5786	Story	Verified	Monish Grover	Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5646	Story	Verified	Ray Ward	Associate NR0835 to the LR-PCR barcoding array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5639	Story	Verified	Meghana Joshi	Support for barcode validations when creating Tissue Slides	fix_versions: pattern mismatch ['LOPS 1.1.1.3 (hotfix hypercare)']
LOPS-5605	Story	Verified	Kevin Detweiler	Assay Details Page: Add a 'Workitem Description' column next to 'Workitem ID'	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5563	Story	Verified	Vasilii Sevriugin	PacBio LRPCR - Update Sequencing Run Complete Processing Code (array lookup)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5532	Story	Verified	Ize Imai	Update Worklist generator to exclude failing Samples	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5367	Story	Verified	Ize Imai	cfDNA Sequencing Prep Pool Quant runlog parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5348	Story	Verified	Sri Gorantla	Residual Quant Array method/layout	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5318	Story	Verified	Leonid Garin	Update Pipe Launch Request for WES and G64 to query using old and new attribute types for assayRequestDependencies	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5254	Story	Verified	Sri Gorantla	gDNA Library Prep Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5166	Story	Verified	Leonid Garin	Allow users to re-queue partial plate of patient blood samples that have failed extraction quant for pre-extraction	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5155	Story	Closed	Krishna Tanuku	PostLib Residual Quant test method and parameter list and PostLib Quant group test method update	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4675	Story	Verified	Vasiliy Kumaev	Allow sample rework from Assay QC	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4393	Story	Closed	Mikhail Terpugov	Runlog Processing for Plasma Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4098	Story	Verified	Sri Gorantla	gDNA Master Mix part number set up	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3301	Story	Verified	Dennis Lin	Extraction/Library QC: Update Plate-Level Sample QC (Minimum Number of Samples)	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-2747	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (2 of 3 - Sample Results)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2709	Story	Verified	Vasiliy Kumaev	cfDNA PostLib Quant Result (Spectramax) - Runlog Processor	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 20250310 (38) (35 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6165	Story	Verified	Sri Gorantla	Associate LR-PCR barcode primer plates to gDNA LR-PCR barcoding plates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6100	Story	Verified	Monish Grover	Add Approval Types to sgNIPT Quant Steps	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	fix_versions: empty
LOPS-6015	Story	Verified	Sri Gorantla	Consumable Update to Array Method sgNIPT cfDNA Library Amplification	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5935	Story	Verified	Kevin Detweiler	GHP: Update Assay Template Description	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5923	Story	Closed	—	Test only: Verify LOPS can process pipeline results containing value of E+09 magnitude	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.2.0 (M9)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5910	Story	Verified	Krishna Tanuku	Create a new run detail group for sgNIPt cfDNA PostLig Pur manual step	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5909	Story	Closed	—	Test only: Trigger LRPCR pipeline via REST API (Controls)	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	fix_versions: empty
LOPS-5834	Story	Verified	Swati Giri	Update SourceWell field in worklists to SourcePosition	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5825	Story	Closed	Hani Yakan	Create "Process Types" for all the tfMRD work list steps and create respective reference values in corresponding referen	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5790	Story	Verified	Ray Ward	Update LR-PCR Primer Plate maps to add Amplicon #/Multiplier and size multiplier	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5770	Story	Closed	Bryan Jensen	Manual Run Details: Prevent Duplicate Run Details	fix_versions: empty
LOPS-5764	Story	Verified	Michael Livingston	cfDNA Post Ligation Transfer runlog processor, Library Amplification worklist generator, PostLig Transfer array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5683	Story	Verified	Olawale Dada	gDNA Barcode Primer Plate maps consumable type updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5658	Story	Verified	Klead Fusha	cfDNA Sequencing Prep Pool Dilution runlog parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5490	Story	Verified	Meghana Joshi	List Array Methods dropdown in the Assay QC filter in alphabetical order	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5389	Story	Verified	Kevin Detweiler	WES: Extraction Samples Page > Display Assay	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5360	Story	Verified	Olawale Dada	cfDNA Library Prep Runlog parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5242	Story	Verified	Klead Fusha	gDNA LR-PCR Pool Purification Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5237	Story	Verified	Krishna Tanuku	Hybrid Capture Day 1 Hybridization Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5235	Story	Verified	Klead Fusha	gDNA LR-PCR Pooling Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5233	Story	Verified	Klead Fusha	gDNA LR-PCR Quantification Plating - Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5232	Story	Verified	Mai Ton-Nu	gDNA LR-PCR Quantification Worklist Generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5230	Story	Verified	Lev Evstratov	gDNA LR-PCR Barcoding Worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5203	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number setup and name updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5080	Story	Verified	Michael Livingston	gDNA LR-PCR Pool Purification worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5028	Story	Verified	Kevin Detweiler	Sample List Page > Display Patient Sample Barcode for Samples on Plate	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-4923	Story	Closed	Alex Pakhunov	Support Sequencing Run Complete processing for tfMRD meythlation assays	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4922	Story	Closed	Alex Pakhunov	Update logic for retriggering Pipeline Launch Request (add tfMRD mapping)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4397	Story	Closed	Kersha Eddy	Runlog Processing for cfDNA Extraction	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4391	Story	Closed	Kersha Eddy	Worklist Generation for Plasma Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3882	Story	Verified	Leonid Garin	Update Default ArrayRunData Processing for sgNIPT	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2708	Story	Verified	Gianna Bell-Eunice	Library amplification purification instrument integration	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 20250224 (37) (53 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	fix_versions: empty
LOPS-5947	Story	Closed	Isaac Vargas	Kafka white listing of new tfMRD assay codes	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5917	Story	Verified	Ray Ward	QC Batch RunDetails Updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5903	Story	Closed	—	Test only: LRPCR - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5902	Story	Verified	Meghana Joshi	Plate to Rack processor and loader for gDNA normalization	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5880	Story	Verified	Sri Gorantla	Updates to sequencing run test method parameters	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5879	Story	Verified	Mai Ton-Nu	Create cfDNA and gDNA reagents in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5862	Story	Verified	Lev Evstratov	Natera barcode is not being populated after cfDNA Extraction runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5818	Story	Closed	Leonid Garin	Test only: Update which outputs are being recorded to assay from pipeline result json (LRPCR)	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5814	Story	Verified	Mehmet Ali Eken	Restrict sample and array barcode editing to Admins only	fix_versions: pattern mismatch ['LOPS 1.1.1.3 (hotfix hypercare)']
LOPS-5756	Story	Closed	Alex Pakhunov	Give NtrJsonWorklistGenerator the ability to specify sample listing sort order	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform']
LOPS-5708	Story	Verified	Monish Grover	Updates to gDNA extraction quant master data to support QC Review on orignal extraction plate	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5652	Story	Verified	Ron Enson	Create cfDNA and gDNA reagents in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5649	Story	Verified	Dennis Lin	Blood Extraction Results Review: Hide 'Log Exception' Action	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5595	Story	Closed	Swati Giri	Updates to cfDNA and gDNA sequencing run test method parameters	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5588	Story	Verified	Kathy Dao	Associate Creation of RunLog TM and and update to MD	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5559	Story	Verified	Meghana Joshi	Update processor of sgNIPT pipeline-result messages to use sdidataid as key	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5556	Story	Closed	—	Update LOPS API Pipeline Outputs to also send collection kit in requested assay	fix_versions: empty
LOPS-5518	Story	Verified	Olawale Dada	Set FFE upper and lower thresholds for cfDNA control lots in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5512	Story	Closed	Ray Ward	Update End Repair Plating Worklist Policy Node for multiple rack sample ranges	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5477	Story	Verified	Leonid Garin	Test only: Have the ability to record pipeline outputs (file paths) from pipeline result (LRPCR)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5455	Story	Closed	Hani Yakan	Worklist Generation for Library Amplification Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5400	Story	Closed	—	Test only: NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5388	Story	Verified	Swati Giri	WES: Extraction Samples Page	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5386	Story	Closed	Alex Pakhunov	Update the reagent sync to also sync the u_containerbarcode/matrix barcode fields.	fix_versions: pattern mismatch ['RS M4 (1.0.4.0)']
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5335	Story	Verified	Sri Gorantla	Update HBB barcoding array layout and update for HBB Quant	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5314	Story	Verified	Kevin Detweiler	Review of read-only job type changes	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5311	Story	Verified	Klead Fusha	cfDNA Library Prep End Repair Runlog parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5278	Story	Verified	Leonid Garin	Trigger Hybrid Capture pipeline via REST API - Continue 2 (ControlFFE)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5260	Story	Verified	Leonid Garin	Update Reagent Validation API to matrix barcode	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5239	Story	Verified	Krishna Tanuku	Hybrid Capture Day 2 Capture Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5231	Story	Verified	Klead Fusha	gDNA LR-PCR Barcoding Runlog parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5201	Story	Verified	Mehmet Ali Eken	Investigate and implement REST action restrictions	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5142	Story	Verified	Sri Gorantla	Remove calculations for gDNA LR-PCR quant and update master data	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4994	Story	Verified	Lev Evstratov	Allow users to select the same plate for different PacBio sequencing runs in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4903	Story	Verified	—	PacBio LRPCR - Assay QC UI (1 of 3 - General, RunResult, Batch)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4877	Story	Closed	Alex Pakhunov	Create API endpoint (cfDNA from LV 1.0)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation']
LOPS-4395	Story	Closed	Isaac Vargas	Worklist Generation for cfDNA Extraction	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4082	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3754	Story	Verified	Swati Giri	WES: Tissue Extraction Re-Run: Display 'Tissue Extraction Run Number' for Tissue Samples Queued for Tissue Extraction	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-3561	Story	Closed	Mikhail Terpugov	Set up policy to support loading of tfMRD samples into tfMRD Verso	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3427	Story	Verified	Ray Ward	Track Input/Output Plate Barcodes in Run Details across Automated Workflow Steps	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-2800	Story	Verified	Klead Fusha	Implement Rack to Plate Transfer Class for sgNIPT Runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2799	Story	Verified	Ron Enson	Hybrid Capture Day 1 Hybridization worklist generation - Impl work	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2764	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (3 of 3 - Control Results)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2751	Story	Closed	—	Support actions at gDNA extraction quant results review	fix_versions: empty
LOPS-2739	Story	Verified	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2662	Story	Closed	Olawale Dada	gDNA Normalization runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2652	Story	Verified	Krishna Tanuku	gDNA Pre-extraction and Extraction runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2473	Story	Verified	Gianna Bell-Eunice	gDNA Sample batching protocol - implementation work	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2429	Story	Verified	Lev Evstratov	cfDNA Post Library Quant Plating (Biomek) - Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 20250210 (36) (45 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5726	Story	Closed	Vasiliy Kumaev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3) Part 2 - Batches	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5638	Story	Closed	Hani Yakan	Update Plasma Isolation TM, PL, QC Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation']
LOPS-5611	Story	Verified	—	Test only: PacBio LRPCR - Record sequencingSampleId to assay attributes	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5609	Story	Verified	—	Sequencing Prep: Support Selection of 'Inline QC Valid' Reagents (Test Only)	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5594	Story	Verified	Alex Pakhunov	Illumina NGS - Record sequencingSampleId to assay attributes	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5593	Story	Verified	Kathy Dao	Plasma isolation calculation updates	fix_versions: empty
LOPS-5575	Story	Verified	Olawale Dada	Plasma isolation and cfDNA Extraction MD updates for Runlog (Runlog Headers)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5562	Story	Verified	Ray Ward	Update End Repair Array method to add cfDNA controls in the correct positions	fix_versions: empty
LOPS-5555	Story	Verified	Leonid Garin	Update sequencingSampleId sent in sgNIPT HC sequencing manifest	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5492	Story	Verified	Leonid Garin	LR-PCR Send unique sequencingSampleId in the sequencing manifest to Pipelines	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5487	Story	Verified	Sri Gorantla	Update calculations for Partial Isolation parameter test to capture correct parameter	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5476	Story	Verified	Krishna Tanuku	Update SourcePosition entry for End Repair worklist to remove "0" between the row and column for the tube position	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5465	Story	Verified	Vasilii Sevriugin	Configure deduplication of pipeline-result messages	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5462	Story	Verified	Isaac Vargas	cfDNA PostLig Transfer Worklist Policy Configuration and MD updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5405	Story	Verified	Leonid Garin	Update which outputs are being recorded to assay from pipeline result json (HC, Alg)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5376	Story	Verified	Lev Evstratov	new Quant Result Processor - gDNA extraction quantification result runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5363	Story	Verified	Gianna Bell-Eunice	cfDNA PostLib Quant Plating - Worklist Generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5288	Story	Verified	Leonid Garin	Extraction Batch Runlog Processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5256	Story	Verified	Vasilii Sevriugin	Add Okta authentication to establish a secure connection between LOPS and LOPS-PIPE Connector	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5246	Story	Verified	Leonid Garin	PacBio LR-PCR - Invocation of Sequence Manifest when the Sequencing Run Complete message is processed	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5238	Story	Verified	Monish Grover	Hybrid Capture Day 2 Capture Worklist Generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5186	Story	Verified	Michael Livingston	Updates needed for sample result evaluation and spec for gDNA extraction quant	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5151	Story	Verified	Ize Imai	Create reagents importer process in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5055	Story	Verified	Olawale Dada	Remove calculations for cfDNA PostLib quant and update master data	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5014	Story	Verified	Gianna Bell-Eunice	Samples that have been plated once are not able to be loaded onto other plates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4939	Story	Verified	Meghana Joshi	Support for the PD assay when there are multiple source samples for the sequencing assays	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-4933	Story	Verified	Valeria Vargas	LOPS Verso Store Runlog	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4906	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (3 of 3 - Control Results)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4905	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (2 of 3 - Sample Results)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4870	Story	Verified	Leonid Garin	Ability to assign multiplier variables on gDNA primer plates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4621	Story	Verified	Mai Ton-Nu	Add additional required Reagents for GHP workflow to the init reagents script	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-4611	Story	Verified	Michael Livingston	gDNA Normalization worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4102	Story	Verified	Olawale Dada	gDNA LR-PCR Primer plate setup (CFTR)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4032	Story	Verified	Sri Gorantla	cfDNA Barcode Primer Plate plate maps updates - consumable type	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3975	Story	Verified	Mikhail Terpugov	LOPS Verso Retrieve runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2801	Story	Verified	Gianna Bell-Eunice	gDNA Library Prep Worklist Generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2731	Story	Verified	Vadim Gusev	PacBio LRPCR - Assay Disposition Handling in the Pipeline Results processing (LRPCR Pipe Result 3 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2705	Story	Verified	Brandon Culver	cfDNA Sequencing Prep (pool quant and dilution) worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2678	Story	Verified	Lev Evstratov	gDNA extraction quantification M200 result runlog processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2538	Story	Verified	Monish Grover	Plasma Isolation instrument integration - Worklist Generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2529	Story	Verified	Michael Livingston	cfDNA Extraction worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2507	Story	Verified	Vadim Gusev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2270	Story	Verified	Alex Pakhunov	Trigger Alg pipeline via REST API	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1533	Story	Verified	Vadim Gusev	Add processor of LRPCR pipeline-result message (LRPCR Pipe Result 1 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 20250127 (35) (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8656	Story	Opened	Kevin Detweiler	CLONE - WES: Disposal for Sample in Blood Rack	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5531	Story	Closed	Isaac Vargas	Update tfMRD with Tracer Assay Template	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5530	Story	Closed	Ron Enson	Create tfMRD no tracer Assay Template	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5526	Story	Verified	Michael Livingston	Restore gene routing config to assay template in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5436	Story	Closed	Ron Enson	Array Parameter Updates for Size Selection	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5420	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS - additional RefDataCatalog updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5411	Story	Verified	Monish Grover	Creation of cfDNA controls in LOPS and plate layout update for cfDNA downstream steps	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5377	Story	Verified	Leonid Garin	SampleExtractionRunDataProcessor code update for cfDNA Extraction Runlog Processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5353	Story	Closed	Mai Ton-Nu	Updates for Array Method for Size Selection Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5352	Story	Verified	Ize Imai	LOPS Standalone Sample worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5319	Story	Verified	Leonid Garin	Update ReTriggerPipe sql query to search for the old and new attribute types for assayRequestDependencies	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5271	Story	Verified	Ize Imai	Update/create user role to have access to "Mix Consumable" button	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5210	Story	Verified	Vasilii Sevriugin	Add integration with Cloud Config to support S3 Client configuration	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5200	Story	Verified	Sri Gorantla	Additional validation for slide pooling	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5181	Story	Closed	Klead Fusha	Configure NtrWorklistGeneratorTask to differentiate Quant and Post-Quant steps	fix_versions: empty
LOPS-5153	Story	Verified	Krishna Tanuku	cfDNA Group Test method reorganization and Assay Template update	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5108	Story	Closed	Mikhail Makarin	Process post-extraction assay request for ASSAY-00057 (tfmrd-methyl-w-tracer-au-v1)	fix_versions: empty
LOPS-4957	Story	Verified	Kevin Detweiler	WES: Disposal for Sample in Blood Rack	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-4946	Story	Closed	Valeria Vargas	Read Only access for site to site shipping	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4904	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (1 of 3 - General, RunResults)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4570	Story	Verified	Lev Evstratov	The system must support Plate to Rack arraytransfermethods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4134	Story	Closed	Kersha Eddy	tfMRD SDI Default Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4040	Story	Verified	Vadim Gusev	Add processor of Alg Pipeline pipeline-result message (Alg Pipe Result 1 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3961	Story	Closed	Hani Yakan	Iso/Ext Assay Template configuration	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3801	Story	Verified	Michael Livingston	gDNA downstream assay template updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3783	Story	Verified	Lev Evstratov	Copy action for transfer array action and sample template use for aliquot/derivative/pool sample creation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3418	Story	Verified	Kevin Detweiler	Add assay info to sample list page	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-3135	Story	Verified	Ize Imai	Make Container Type Visible during use of Array Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2772	Story	Verified	Vadim Gusev	sgNIPT Algorithm- Implement ability to process metric output file (Alg Pipe Result 2 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2771	Story	Verified	Vadim Gusev	sgNIPT Algorithm - Assay Disposition Handling in the Pipeline Results processing (Alg Pipe Result 3 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2727	Story	Verified	Vadim Gusev	Handle Pipe Job Errors	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2649	Story	Closed	—	Test cfDNA Downstream assay rework points	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1651	Story	Verified	Leonid Garin	The system shall have the the ability to process the SamLog Kafka message and the required data will be captured in the	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 20250113 (34) (49 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8657	Story	Opened	Kevin Detweiler	CLONE - WES: Create Blood Racks	fix_versions: empty
LOPS-5437	Story	Closed	Hani Yakan	Array Parameter Updates for Size Selection Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5435	Story	Closed	Isaac Vargas	Array Parameter Updates for Pooling Prep and Dilution	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5434	Story	Closed	Ron Enson	Array Parameter Updates for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS Launch 1.0.0.0', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5433	Story	Closed	Isaac Vargas	Array Parameter Updates for Library Amplification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5432	Story	Closed	Ron Enson	Array Parameter Updates for Methylation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5431	Story	Closed	Isaac Vargas	Array Parameter Updates for Library Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5380	Story	Closed	Ron Enson	Update Array Transfer Method for Post-Pooling Quantification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5366	Story	Closed	Ron Enson	Update for Standard Test Method and Parameter List for Size Selection Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5355	Story	Verified	Gianna Bell-Eunice	Update node name TM (Rack) - sgNIPT gDNA Pre-Extraction - 1	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5345	Story	Verified	Gianna Bell-Eunice	Addition of concentration parameter to LPCR pool	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5340	Story	Closed	—	Test only - Inline-QC for Sequencing Steps	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-5337	Story	Closed	Hani Yakan	Update Size Selection Quantification Specification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5334	Story	Verified	Monish Grover	Update array layout for HBA and CFTR to Add standard	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5317	Story	Verified	Monish Grover	cfDNA library prep updates - CF Negative control zone addition, sample type updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5315	Story	Closed	Mai Ton-Nu	tfMRD Controls	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation']
LOPS-5310	Story	Verified	Gianna Bell-Eunice	Update param type for gDNA Sequencing Run array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5289	Story	Verified	Mikhail Makarin	PacPbio LRPCR - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete mess	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5218	Story	Closed	Isaac Vargas	Parameter Updates for Library Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5107	Story	Verified	Kevin Detweiler	WES: Create Blood Racks	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-5045	Story	Verified	Olawale Dada	Updates to LibAmp Pur to PostLib Quant transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5005	Story	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue 2 (batchId and gene)	fix_versions: empty
LOPS-4985	Story	Verified	Vasiliy Kumaev	Propagate Child Sample Barcode during auto Sample pooling	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4945	Story	Closed	Valeria Vargas	Job Type for Logistics Users	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4927	Story	Closed	Leonid Garin	SamRep update exclusions	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4896	Story	Verified	Mikhail Makarin	Save patient source sample to the assay when processing assay requests on derivative samples	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4814	Story	Verified	Leonid Garin	Update Assay Request message processing to parse assayRequestDependencies from requestParams section of new schema versi	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4798	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4782	Story	Closed	Brad Garrett	Process tissue filler samples for WGS	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4781	Story	Closed	Brad Garrett	Process blood filler samples for WGS	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4746	Story	Verified	Ize Imai	Consolidate Assay QC buttons on the Array and Historical Array List pages	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4677	Story	Verified	Michael Livingston	Updates to PostLib Quant specfications Master Data updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4667	Story	Verified	Gianna Bell-Eunice	gDNA Pre-extraction and Extraction worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4519	Story	Closed	Brandon Culver	Worklist Generation for Post-Capture Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4455	Story	Closed	Hani Yakan	Worklist Generation for Methylation Workflow Steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4415	Story	Closed	Isaac Vargas	Worklist Generation for Second Bead Addition + Library Prep Workflow Steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3911	Story	Verified	Monish Grover	Updates for sgNIPT Algorithm assay (Dry Lab Only) - Array method, and array layout	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3758	Story	Closed	Kevin Detweiler	Capture QC Review: Support QC Report	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-3757	Story	Closed	Kevin Detweiler	Library QC Review: Support QC Report	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-3746	Story	Verified	Vasiliy Kumaev	Build Plasma Isolation instrument Runlog Processor	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3672	Story	Closed	Kevin Detweiler	Extraction QC Review: Support QC Report	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-3651	Story	Closed	Alex Pakhunov	Process derivative (cfDNA) sample information from LV 1.0	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3531	Story	Verified	Leonid Garin	Have the ability to record pipeline outputs (file paths) from pipeline result (HC, Alg)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3292	Story	Closed	Swati Giri	WES: Blood Extraction Re-Run: Display 'Blood Extraction Run Number' for Blood Samples Queued for Blood Extraction	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-2728	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Assay Disposition Handling in the Pipeline Results processing (HC Pipe Result 3 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2506	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, excluding controls)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2470	Story	Verified	Vasiliy Kumaev	LOPS Verso Pick/Retrieve worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2230	Story	Verified	Meghana Joshi	Create validation for single-use flow cells	fix_versions: pattern mismatch ['LOPS 1.1.2.0 (M7)']
LOPS-1535	Story	Verified	Vadim Gusev	Add processor of Hybrid Capture Pipeline pipeline-result message (HC Pipe Result 1 of 3)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 9 (25) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3836	Story	Closed	Laura Dietrick	Updates for sample type gDNA	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2722	Story	Verified	Jonathan Quinn	Library Amplification Purification Array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2712	Story	Verified	Jonathan Quinn	Capture wash/amp/purification (Day 2) array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2653	Story	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (24)	fix_versions: empty
LOPS-2596	Story	Verified	Jonathan Quinn	Library Amplification Purification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2594	Story	Verified	Monish Grover	Capture wash/Amp/Pool Purification (Day 2) array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2593	Story	Verified	Jonathan Quinn	Pooling/Hybridization (Day 1) array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2590	Story	Verified	Laura Dietrick	cfDNA Library Prep group test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2433	Story	Verified	Monish Grover	Capture Wash/Amplification (Day 2) test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2432	Story	Verified	Krishna Tanuku	Pooling/Hybridization (Day 1) test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2425	Story	Verified	Laura Dietrick	PostLib Quantification array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2416	Story	Verified	Laura Dietrick	Library amplification purification test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 8 (24) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3378	Story	Verified	Kathy Dao	sgNIPT Plasma Master Data Updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2664	Story	Verified	Krishna Tanuku	Updates to Isolation Assay Template - add group and standard test methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2595	Story	Verified	Jonathan Quinn	Post ligation purification array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2539	Story	Verified	Kathy Dao	sgNIPT Plasma Process group test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-22', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2430	Story	Verified	Jonathan Quinn	Library Amplification array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2426	Story	Verified	Monish Grover	Post Library Quantification test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2275	Story	Closed	Kathy Dao	KD Ticket Design work - Sprint 8 (24)	fix_versions: empty

sgNIPT Sprint 7 (23) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2725	Story	Verified	Jonathan Quinn	gDNA Extraction to Quant Array Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2721	Story	Verified	Krishna Tanuku	gDNA Quant Array Master Data	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2720	Story	Verified	Jonathan Quinn	gDNA Extraction Array Master Data	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2582	Story	Verified	Monish Grover	Library amplification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2581	Story	Verified	Jonathan Quinn	Post ligation purification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2542	Story	Verified	Jonathan Quinn	LibPrep End Repair, A-tailing, Ligation, EDTA addition array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2540	Story	Verified	Krishna Tanuku	gDNA downstream assay template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2418	Story	Verified	Monish Grover	cfDNA downstream assay template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2415	Story	Verified	Monish Grover	Library amplification test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2414	Story	Verified	Monish Grover	Post ligation purification test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2357	Story	Verified	Laura Dietrick	SDI Group Test Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 6 (22) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2723	Story	Verified	Jonathan Quinn	gDNA PEXT to EXT Array Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2663	Story	Verified	Jonathan Quinn	gDNA Normalization test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2565	Story	Verified	Laura Dietrick	gDNA Extraction Process group test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-22', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2493	Story	Verified	Laura Dietrick	gDNA Pre-extraction array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2465	Story	Verified	Monish Grover	gDNA Extraction Quant test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2358	Story	Verified	Kathy Dao	LibPrep End Repair, A Tailing, Ligation and EDTA test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 5 (21) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2933	Story	Verified	Monish Grover	Plasma Isolation Manual Recovery Test Method and ParameterList	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2661	Story	Verified	Kathy Dao	Updates to parameter list for gDNA pre-extraction test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2651	Story	Verified	Jonathan Quinn	cfDNA Extraction QC Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2579	Story	Verified	Jonathan Quinn	gDNA Extraction test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2562	Story	Verified	Krishna Tanuku	gDNA Pre-extraction reagents	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2527	Story	Verified	Laura Dietrick	Child plasma sample template (for cfDNA extraction)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2388	Story	Verified	Laura Dietrick	Isolation child plasma test method and parameter	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2277	Story	Verified	Jonathan Quinn	cfDNA extraction test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 4 (20) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2647	Story	Verified	Laura Dietrick	sgNIPT Blood Process Group Test Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 3 (19) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2626	Story	Closed	—	Child gDNA sample template	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2577	Story	Verified	Laura Dietrick	Child cfDNA sample template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2454	Story	Verified	Jonathan Quinn	ParamList addition to sgNIPTIsolation Test Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 2 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2464	Story	Verified	Jonathan Quinn	gDNA Pre-extraction test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-18', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2276	Story	Verified	Laura Dietrick	Isolation QC Method configuration	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 16 (32) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4980	Story	Verified	Gianna Bell-Eunice	gDNA Sequencing Prep final loading dilution array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4743	Story	Verified	Laura Dietrick	Isolation assay template updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3956	Story	Verified	Krishna Tanuku	cfDNA downstream assay template updates - add remaining test methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3913	Story	Verified	Monish Grover	Updates to cfDNA PostLig Purification step - add/remove transfer methods, etc	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2578	Story	Verified	Monish Grover	Updates for gDNA Extraction Quantification specification	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 15 (31) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5003	Story	Verified	Monish Grover	cfDNA Library Prep End Repair parameter list Update	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5002	Story	Verified	Michael Livingston	gDNA Library Prep Group Test Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4979	Story	Verified	Olawale Dada	gDNA Sequencing Prep final loading dilution test method and param list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4970	Story	Verified	Monish Grover	gDNA Sequencing Prep Array Transfer Methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4893	Story	Verified	Gianna Bell-Eunice	PL/SPEC Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4865	Story	Verified	Olawale Dada	LR-PCR Pool Purification Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4864	Story	Verified	Olawale Dada	gDNA array transfer method updates: Pool Tapestation Quant and Library Prep	fix_versions: empty
LOPS-4800	Story	Verified	Krishna Tanuku	gDNA Sequencing array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4799	Story	Verified	Olawale Dada	cfDNA sequencing run complete test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4789	Story	Verified	Krishna Tanuku	Associate sgNIPT cfDNA Capture/Hybridization TMs with sgNIPT cfDNA Capture/Hybridization array methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4744	Story	Verified	Olawale Dada	Plasma Isolation TM and QC Method updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4674	Story	Verified	Kathy Dao	cfDNA library prep updates - Positive, negative control position updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4557	Story	Verified	Olawale Dada	Update Plasma Isolation and Manual Isolation Sample Template and Group Test Methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4083	Story	Verified	Michael Livingston	gDNA LR-PCR Primer plate setup (HBB)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2797	Story	Verified	Olawale Dada	LR-PCR Quantification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2755	Story	Verified	Krishna Tanuku	gDNA LR-PCR array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2438	Story	Verified	Olawale Dada	gDNA Sequencing Prep array methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 14 (30) (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4747	Story	Verified	Laura Dietrick	Update calculation for gDNA Pool tapestation to be on quant plate	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4742	Story	Verified	Gianna Bell-Eunice	Updates to ER, A-tailing, and ligation array methods (Master Mix updates)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4737	Story	Verified	Laura Dietrick	Create new child cfDNA sample template and add container type	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4111	Story	Verified	Laura Dietrick	gDNA Pool Tapestation Quantification array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3889	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number set up (MM0001-MM0003)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2754	Story	Verified	Krishna Tanuku	Pool quantification Array Method and Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2744	Story	Verified	Keith Ngolley [X]	Sequencing Prep Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2738	Story	Verified	Krishna Tanuku	gDNA Final loading dilution array method (gDNA Sequence Pool Dilution)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2695	Story	Verified	Gianna Bell-Eunice	Sequencing Run Complete message Master Data (gDNA)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2623	Story	Verified	Gianna Bell-Eunice	Updates for plasma manual isolation, partial isolation/norm	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 13 (29) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4676	Story	Verified	Gianna Bell-Eunice	Remove cfDNA Library Quantification step from HybCap Group test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4671	Story	Verified	Gianna Bell-Eunice	Update gDNA Final Loading Dilution Test Method and Parameter List names to gDNA Sequence Pool Dilution	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4125	Story	Verified	Olawale Dada	gDNA SDI Group Test Method (LR-PCR Barcoding)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3977	Story	Verified	Gianna Bell-Eunice	Nuclease treatment array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2796	Story	Verified	Monish Grover	LR-PCR Quantification array transfer methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2625	Story	Verified	Laura Dietrick	LR-PCR Pooling Array Transfer Methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2599	Story	Verified	Laura Dietrick	gDNA Repair, A-tailing, Adapter Ligation array methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2575	Story	Verified	Keith Ngolley [X]	cfDNA Barcode Primer Plate plate maps	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2563	Story	Verified	Olawale Dada	gDNA Final Loading Dilution Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 12 (28) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4227	Story	Verified	—	Create testcases with sgNIPT Assay-00041 Happy Path	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation']
LOPS-3976	Story	Verified	Gianna Bell-Eunice	Nuclease treatment test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2665	Story	Verified	Laura Dietrick	LR-PCR Pooling Array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2605	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2598	Story	Verified	Gianna Bell-Eunice	gDNA Repair/A-tailing, adapter ligation test methods and parameter lists	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2564	Story	Verified	Kathy Dao	gDNA Library Prep initial transfer method (pool to well)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2434	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 11 (27) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4056	Story	Verified	Olawale Dada	Updates for LR-PCR Pooling test method and parameter list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3912	Story	Verified	Laura Dietrick	cfDNA library prep updates - control/array layout update,	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2997	Story	Verified	Jonathan Quinn	Pooling/Hyb (Day 1) Array Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2692	Story	Verified	Laura Dietrick	Sequencing Run Complete message Master Data (cfDNA)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2584	Story	Verified	Krishna Tanuku	gDNA LR-PCR Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2580	Story	Verified	Monish Grover	gDNA LR-PCR Quantification Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2436	Story	Verified	Monish Grover	Pool Dilution Array Method and Transfer Method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2315	Story	Verified	Laura Dietrick	Create Dry Lab only assay template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 10 (26) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3951	Story	Verified	Jonathan Quinn	Create new array layout for Array method sgNIPT cfDNA LibAmp Purification	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3887	Story	Verified	Jonathan Quinn	Updates for cfDNA Library Prep Quantification - add specification	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3832	Story	Verified	Kathy Dao	Update Master data for gDNA Extraction Demo	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3469	Story	Verified	Monish Grover	cfDNA downstream assay template updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2592	Story	Verified	Laura Dietrick	LR-PCR Pooling Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2591	Story	Verified	Krishna Tanuku	cfDNA Hybrid Capture group test method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2437	Story	Verified	Laura Dietrick	cfDNA Pool Dilution Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2435	Story	Verified	Jonathan Quinn	Pool Quantification Test Method and Parameter List	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2428	Story	Verified	Monish Grover	cfDNA Post Library Quantification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']

sgNIPT Sprint 1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2380	Story	Verified	Jonathan Quinn	Iso/Ext Assay Template configuration	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-17', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2263	Story	Verified	Jonathan Quinn	Isolation test method and param list	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS-MVP-17', 'LOPS 1.2.0.0 (sgNIPT Launch)']

WESonX Sprint 32 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4851	Story	Closed	Kevin Detweiler	Associate 'Candidate for Tissue Re-Work' from 'Tissue Block' on 'Tissue Extraction Sample'	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4115	Story	Closed	Kevin Detweiler	Capture QC Review: Update 'Plate-Level Pool QC'	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']

WESonX Sprint 31 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5020	Story	Closed	Kevin Detweiler	WES: Access for Lab Ops User (Test Only)	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-5019	Story	Closed	Kevin Detweiler	WES: Access for Extraction User (Test Only)	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']

WESonX Sprint 28 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3968	Story	Closed	Meghana Joshi	Assay QC Review: Exclude SAMPLE from POOL Re-Run starting from Blood Extraction/Histopathology (Test-Only)	fix_versions: pattern mismatch ['WES X: Implementation PostLaunch P1', 'LOPS M3 (1.0.3.0)']

WESonX Sprint 27 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3689	Story	Verified	Swati Giri	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3650	Story	Verified	Mikhail Makarin	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 26 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4016	Story	Verified	Kevin Detweiler	Addition of a "Received Samples" filter	fix_versions: pattern mismatch ['WES X: Implementation Launch']
LOPS-3973	Story	Verified	—	Assay QC Review: Maintain SAMPLE in POOL Re-Run starting from Hybrid Capture/Sequencing Prep (Test-Only)	fix_versions: pattern mismatch ['WES X: Implementation PostLaunch P1', 'LOPS M2 (1.0.2.0)']
LOPS-3717	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood/Tissue Sample from 'Hybrid Capture' Workflow to 'Sequencing Prep' Workflow (Test-Only)	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3688	Story	Closed	Swati Giri	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3687	Story	Closed	Swati Giri	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3649	Story	Closed	Meghana Joshi	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3249	Story	Closed	Meghana Joshi	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 25 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3824	Story	Closed	—	WES: Display Received Samples Ready for Tissue Extraction (Test Only)	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3716	Story	Closed	Michael Livingston	Assay Cancellation Request: Tissue Sample from 'Tissue Extraction' Workflow to Tissue 'Library Prep' Workflow (Test-Only	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3703	Story	Closed	Gianna Bell-Eunice	Sequencing Prep: Update Transfer Volume Table	fix_versions: pattern mismatch ['WES X: Implementation PostLaunch P1', 'LOPS M2 (1.0.2.0)']
LOPS-3426	Story	Closed	Kevin Detweiler	Extraction/Library/Capture QC Review: Validate Cannot Re-Quant Plate after QC Review is Completed	fix_versions: pattern mismatch ['WES X: Implementation PostLaunch P1', 'LOPS M2 (1.0.2.0)']
LOPS-1452	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood Sample from 'Blood Extraction' Workflow to 'Library Prep' Workflow (Test-Only)	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 24 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3788	Story	Closed	—	Assay QC Review: Sequencing Prep Pool Disposal (Test Only)	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3517	Story	Closed	Kevin Detweiler	Sequencing Prep: Remove 2 Reagents	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3493	Story	Closed	Michael Livingston	Sequencing Prep: Update Transfer Volume Calculation	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-3491	Story	Closed	Swati Giri	Sequencing: Update Flowcell ID Validation	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-3482	Story	Closed	Kevin Detweiler	Update Capture Quant Task	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3456	Story	Closed	Michael Livingston	Update child instruments to have a new instrument model	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3336	Story	Closed	Mikhail Makarin	Capture QC Review: Validate 'Capture QC Review' Menu Item is Selected	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3285	Story	Closed	Olawale Dada	Support Rare Blood Exceptions	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3111	Story	Closed	Swati Giri	Create Normalization Worklist - Test with Canceled Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2646	Story	Closed	Kevin Detweiler	Hybrid Capture Re-Run: Support Filler Samples - Test Only	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 23 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3420	Story	Closed	Michael Livingston	WES: Support 3-Character Format for Source Well across Worklists	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-3370	Story	Closed	Meghana Joshi	Blood Extraction Results Review: Support 'Sample Status'	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3214	Story	Closed	Meghana Joshi	Update Sample Status to Completed for Re-Run Samples Scheduled for Blood Extraction/Histopathology	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3186	Story	Closed	Kevin Detweiler	WES: Support Filter to Display WES Blood/Tissue Samples for 'Sample Receipt'	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3132	Story	Closed	Swati Giri	Histopath - reconcile test method (Workitem Description)	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21']
LOPS-3112	Story	Closed	Swati Giri	Create Pre-Capture Pooling Worklist - Test with Canceled Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']
LOPS-3035	Story	Closed	Monish Grover	Support Instrument Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1954	Story	Closed	Monish Grover	Support Reagent Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-1839	Story	Closed	Michael Livingston	Track Input/Output Plate Barcodes in Automated Run Details - Extraction Quant	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1566	Story	Closed	Michael Livingston	Tissue Extraction 1 > Min/Max Thresholds for Tissue Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1474	Story	Closed	Mikhail Makarin	Process Blood Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']

WESonX Sprint 22 (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3268	Story	Closed	Kevin Detweiler	Display ‘Number of Passed Samples/Pools’ at Extraction/Library/Capture QC Review	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3180	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Tissue Samples	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-3074	Story	Verified	Michael Livingston	Capture QC Review: Display Blood/Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3073	Story	Closed	Michael Livingston	Library QC Review: Display Blood/Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3072	Story	Closed	Mikhail Terpugov	Blood Extraction Results Review: Display Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3063	Story	Closed	Swati Giri	QC Batch List Page: Display Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-3060	Story	Closed	Meghana Joshi	Include Timestamp, Location, and Username in Blood Extraction Worklist File Name	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2824	Story	Closed	—	Sequencing Prep Re-Run: Support Filler Samples - Test Only	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-2643	Story	Closed	Klead Fusha	WES: Standardize Group Test Methods	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-1475	Story	Closed	Mikhail Makarin	Process Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-1473	Story	Closed	Mikhail Makarin	Sample List View: Display Blood/Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1472	Story	Closed	Kevin Detweiler	Create Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1456	Story	Closed	Michael Livingston	Extraction QC Review: Display Blood/Tissue Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1250	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Verify Tissue Samples on Rack	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 21 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3176	Story	Closed	Klead Fusha	WES: Support Received Samples for Tissue Extraction	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-3134	Story	Closed	Klead Fusha	WES: Support Received Samples for Blood Extraction	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2900	Story	Closed	Matt Smith	Support Exceptions for Assay QC Review	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2893	Story	Closed	Kevin Detweiler	Blood Extraction Worklist: Support Blood Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2856	Story	Closed	Matt Smith	Create Normalization Worklist - Test with Exception Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2855	Story	Closed	Matt Smith	Create Pre-Capture Pooling Worklist - Test with Exception Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2442	Story	Closed	Matt Smith	Support Tissue Exceptions for Assay Workflow	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2441	Story	Closed	—	Support Blood Exceptions for Assay Workflow	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1471	Story	Closed	Kevin Detweiler	Create Blood Filler Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1463	Story	Closed	Kevin Detweiler	Tissue Extraction 1 > Select Tissue Samples > Display Filler Samples, Display Columns	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1287	Story	Closed	Klead Fusha	Tissue Extraction 1 > Select Tissue Samples: Add Control 'Reagent' to QC Batch as Required	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1251	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Select Rack	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-1224	Story	Closed	Mikhail Terpugov	Sample List Page: Display Columns for Samples	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']

WESonX Sprint 20 (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3179	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Blood Samples	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-3169	Story	Closed	Michael Livingston	WES: Update Tissue Primer Plate Map	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2993	Story	Closed	Brad Garrett	WES: Support Histopathology Rework Incident	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2912	Story	Closed	Swati Giri	Support Barcode Display and Scan throughout WES Workflow	fix_versions: pattern mismatch ['WES X: Implementation Launch', 'LOPS Launch 1.0.0.0']
LOPS-2572	Story	Closed	Brad Garrett	WES: Support Sequencing Prep Re-Run	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2571	Story	Closed	Klead Fusha	WES: Support Hybrid Capture Re-Run	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2570	Story	Closed	Mikhail Makarin	WES: Support Histopathology Re-Run	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2568	Story	Closed	Mikhail Terpugov	WES: Support Blood Extraction Re-Run	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2518	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue/Blood Combined POOL Re-Run starting from Sequencing Prep	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2517	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Hybrid Capture	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2516	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Hybrid Capture	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2515	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Histopathology	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2514	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Blood Extraction	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2513	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue SAMPLE Re-Run starting from Histopathology	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2407	Story	Closed	Klead Fusha	Update Capture QC Review page for Hybrid Capture Re-Run	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2406	Story	Closed	Meghana Joshi	Update Capture QC Review page for Re-Quant	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2405	Story	Closed	Klead Fusha	Capture QC Review: Action > Fail Plate and Re-Run from Hybrid Capture	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2402	Story	Closed	Mikhail Makarin	Capture QC Review: Action > Fail Plate and Re-Run from Blood Extraction/Histopathology	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-2401	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-1530	Story	Closed	Brad Garrett	Assay QC Review: Support Blood SAMPLE Re-Run starting from Blood Extraction	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1430	Story	Closed	Meghana Joshi	Capture QC Review: Actions > Re-Quant Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-1283	Story	Closed	Meghana Joshi	Capture Quant > Record New Capture Quant Values	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']

WESonX Sprint 19 (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2843	Story	Closed	Meghana Joshi	WES: Capture QC Review - Task-Based User Flow	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2718	Story	Closed	Kevin Detweiler	WES: Track Sequencing Run Status	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2567	Story	Closed	Kevin Detweiler	WES: Send Status Message for Workflow	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2399	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Blood	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2398	Story	Closed	Mikhail Makarin	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2375	Story	Closed	Kevin Detweiler	Update Library QC Review page for Re-Quant (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2343	Story	Closed	Swati Giri	Extraction Quant: Calculated Concentration for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2342	Story	Closed	Mikhail Terpugov	Extraction/Library Quant: Round Calculated Concentration (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2340	Story	Closed	Mikhail Terpugov	Capture QC: Update Min QC Threshold Symbol (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2339	Story	Closed	Mikhail Terpugov	Library QC: Update Min QC Threshold Symbol (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2338	Story	Closed	Mikhail Terpugov	Extraction QC: Update Min QC Threshold Symbol (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2240	Story	Closed	Klead Fusha	Extraction QC Review: Action > Fail Plate and Re-Run - Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2239	Story	Closed	Mikhail Terpugov	Extraction QC Review: Action > Fail Plate and Re-Run - Blood	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2215	Story	Closed	Klead Fusha	Extraction QC Review > Approve Plate: Exception for Failed Tissue Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2214	Story	Closed	Klead Fusha	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2202	Story	Closed	Brad Garrett	Library Prep - Create Worklist for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1870	Story	Closed	Meghana Joshi	Pre-Capture Pooling: Exclude Failed Samples from Worklist > Exclude 'Library QC' Failed Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1455	Story	Closed	Michael Livingston	Update Extraction QC Review page for Re-Quant (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1274	Story	Closed	Kevin Detweiler	Library QC Review: Actions > Re-Quant Plate (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1270	Story	Closed	Mikhail Makarin	Library Quant > Re-Upload Quant Rundata	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1128	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']

WESonX Sprint 18 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2462	Story	Closed	Michael Livingston	Support Process Type, Sample Number, Sample Type in Library Prep/Amp Worklists	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2400	Story	Closed	Brad Garrett	Library QC Review > Approve Plate: Exception for Failed Tissue Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2397	Story	Closed	Mikhail Terpugov	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2332	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'BERR' Failed Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1425	Story	Closed	Meghana Joshi	Library Amplification - Associate primer plate reagent to plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'WES X: Implementation Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1419	Story	Closed	Meghana Joshi	Normalization - Add Control 'Reagent' to Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1399	Story	Closed	Meghana Joshi	Extraction Quant - Add Standard as Reagent	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'WES X: Implementation Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1120	Story	Closed	Meghana Joshi	Extraction Quant > Re-Upload Quant Rundata	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']

WESonX Sprint 17 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2419	Story	Closed	Mikhail Makarin	Support Process Type and Sample Number across all Worklists	fix_versions: pattern mismatch ['LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2385	Story	Closed	Kevin Detweiler	WES: Update Blood Controls	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2384	Story	Closed	Kevin Detweiler	WES: Update Tissue Controls	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2213	Story	Closed	Mikhail Terpugov	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2206	Story	Closed	Michael Livingston	WES on X: Support Primer Plates	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2149	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2139	Story	Closed	Mikhail Makarin	Sequencing: Select Sequencer	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1418	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'Extraction QC' Failed Sample	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1413	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail and Re-Extract	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1292	Story	Closed	Mikhail Makarin	Sequencing: Create RunDetails Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1291	Story	Closed	Klead Fusha	Sequencing Prep: Create Sequencing Prep Pool	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1290	Story	Closed	Klead Fusha	Sequencing Prep: Create RunDetails master data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1289	Story	Closed	Meghana Joshi	Sequencing Prep: Create RunDetails master data for Transfer Volume	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1286	Story	Closed	Mikhail Terpugov	Capture QC Review - Create QC Review Page and Actions	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1285	Story	Closed	Meghana Joshi	Capture QC - Plate-Level QC Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1278	Story	Closed	Mikhail Makarin	Hybridization Thermal Cycler - Create RunDetails master data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1276	Story	Closed	Mikhail Makarin	Pre-Capture Pooling - Create Worklist Processor and button	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']

WESonX Sprint 16 (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2027	Story	Closed	Klead Fusha	Library Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2026	Story	Closed	Klead Fusha	Library Quant: Rundata - Plating > Store Rundata File as Attachment (Blood)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2025	Story	Closed	Klead Fusha	Extraction Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1956	Story	Closed	Klead Fusha	Library Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1895	Story	Closed	Leonid Garin	The system shall maintain the genealogy of arrays created via rundata file processing.	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1879	Story	Closed	Klead Fusha	Extraction Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1869	Story	Closed	Klead Fusha	Extraction Quant - Create Worklist for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1758	Story	Closed	Meghana Joshi	Library QC Review - QC Review Page for Tissue Library QUANT Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1756	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review Page for Tissue Library SAMPLE Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1745	Story	Closed	Mikhail Terpugov	Library Prep - Process Rundata, Create Plate for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1563	Story	Closed	Mikhail Makarin	Library QC - Create Plate-Level Tissue Quant QC Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1562	Story	Closed	Mikhail Makarin	Library QC - Create Tissue Sample / Control Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1470	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1458	Story	Closed	Meghana Joshi	Tissue Extraction 9 > Tissue Re-Rack - Unload Tissue Samples	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1431	Story	Closed	Meghana Joshi	Capture Quant - Run Details	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1284	Story	Closed	Meghana Joshi	Capture QC - Sample-Level QC Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1282	Story	Closed	Klead Fusha	Capture Quant - Create array method and record results	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1281	Story	Closed	Klead Fusha	Capture PCR Cleanup - Create Rundata processor and Update Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1280	Story	Closed	Michael Livingston	Capture PCR Cleanup - Create Worklist Processor and Button	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1277	Story	Closed	Meghana Joshi	Pre-Capture Pooling - Create Rundata Processor and Update existing Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1265	Story	Closed	Meghana Joshi	Library Quant - Create Worklist, Process Rundata (Results/Plating), Create Plate for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1182	Story	Closed	Swati Giri	Create a Query for the Array page to select Blood/Tissue Plates for Pre-Capture Pooling	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']

WESonX Sprint 15 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2024	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Store Rundata File as Attachment	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-2023	Story	Closed	Mikhail Terpugov	Normalization - Store Rundata File as Attachment (Blood, Tissue)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1744	Story	Closed	Michael Livingston	Fragmentation - Record Run Details for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1743	Story	Closed	Klead Fusha	Extraction QC Review - QC Review Page for Tissue Extraction QUANT Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1742	Story	Closed	Klead Fusha	Extraction Quant - Process Rundata, Create Plate for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1635	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review page for Library QUANT Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1560	Story	Closed	Brad Garrett	Extraction QC - Create Tissue Quant Plate Specification	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1559	Story	Closed	Brad Garrett	Extraction Quant QC - Create Tissue Sample/control Specifications	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1433	Story	Closed	Brad Garrett	Extraction QC Review - QC Review Page for Tissue Extraction SAMPLE Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1420	Story	Closed	Klead Fusha	Normalization - Create rundata processor, array method for Tissue	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']

Oncology 15-2024 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6884	Story	Closed	Michael Livingston	Spike: Investigate issue with multiple genes for Assay 44	fix_versions: empty
LOPS-6785	Story	Verified	Mehmet Ali Eken	Update Reagent Validation API to include matrix barcode in response	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6642	Story	Verified	Michael Livingston	Update master data for plasma manual Isolation	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6517	Story	Verified	Bob Ruff	Generate a verso worklist for all samples that are available for biobanking	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.4.0 (M4)']
LOPS-6477	Story	Verified	Mehmet Ali Eken	Testing not applied to all assays when >1 assay request for the same gDNA sample are processed	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5762	Story	Verified	Lev Evstratov	cfDNA Rework Scenario Handling (Pool Quant) - Master Data Updates	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-2471	Story	Verified	Howard LaHurreau	LOPS support for Verso batching - sample testing	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']

MiSeq Workflows (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9861	Story	Opened	Swati Giri	GHPv2- Miseq Pooling Upload Worklist	fix_versions: empty
LOPS-9841	Story	Opened	Kevin Detweiler	GHPv2 on Miseq: Tramline and Sidebar Updates	fix_versions: empty
LOPS-9839	Story	Closed	Kevin Detweiler	Miseq Tramline and Sidebar Updates	fix_versions: empty
LOPS-9837	Story	Opened	Swati Giri	GHPv2: Add Miseq to Post Amp Side Bar Menu	fix_versions: empty
LOPS-9836	Story	Opened	—	GHPv2 on Miseq Tramline	fix_versions: empty
LOPS-9740	Story	SQA Blocked	Kevin Detweiler	Additional Miseq Tramline and Sidebar Updates	fix_versions: empty
LOPS-9738	Story	Ready for SQA	Kevin Detweiler	WGS Miseq Sequencing InProgress Page	fix_versions: empty
LOPS-9686	Story	SQA Blocked	Kevin Detweiler	Miseq Tramline and Sidebar Updates	fix_versions: empty
LOPS-9515	Story	Ready for SQA	Swati Giri	Miseq Pooling Upload Worklist	fix_versions: empty
LOPS-9446	Story	SQA Blocked	Swati Giri	Add Miseq to Post Amp Side Bar Menu	fix_versions: empty
LOPS-9444	Story	SQA Blocked	Swati Giri	Miseq Tramline	fix_versions: empty

LOPS WES/WGS 20260223 (63) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10053	Story	Code Review	Swati Giri	UI Updates to QC Batch Maintenance Page	fix_versions: pattern mismatch ['WES/WGS 1.0.4.8 (LOPS-WESWGS-1.0.4.8)']
LOPS-9862	Story	Code Review	Swati Giri	MiSeq Pooling Download Worklist	fix_versions: empty
LOPS-9737	Story	In Progress	Kevin Detweiler	WGS Miseq Sequencing Prep Page	fix_versions: empty
LOPS-9636	Story	SQA Blocked	Ray Ward	Enable receiving TNPs from YALP	fix_versions: empty
LOPS-9542	Story	In Progress	Ize Imai	System reads and saves all metrics from PIPE API framework for DAQ	fix_versions: empty
LOPS-9530	Story	In Progress	Ray Ward	Allow Administrator role to edit Disposition on AssayMaint page	fix_versions: pattern mismatch ['WES/WGS 1.0.4.8 (LOPS-WESWGS-1.0.4.8)']
LOPS-9459	Story	Ready for SQA	Swati Giri	MiSeq Pooling Download Worklist	fix_versions: empty
LOPS-9439	Story	In Progress	Kevin Detweiler	MiSeq Qubit	fix_versions: empty
LOPS-9378	Story	SQA Blocked	—	Enable Producing Topic For Rework Samples to be send back to YALP	fix_versions: empty
LOPS-9377	Story	SQA Blocked	Swati Giri	Create a script for consuming YALP event for TXE tubes	fix_versions: empty
LOPS-9316	Story	Opened	—	WES/WGS 1.0.5.0 - E2E sample script updates	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-9236	Story	In Progress	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	fix_versions: pattern mismatch ['WES/WGS 1.0.4.8 (LOPS-WESWGS-1.0.4.8)']
LOPS-8975	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Update to the Assay QC Review roll-up pass/fail logic	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8974	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Sample-level JasperReport support for merged QC metrics	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8973	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Primer Design QC Review page	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8972	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Assay QC Review page	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8971	Story	Ready for SQA	Ize Imai	Storage of the number of merge candidates at the time of DAQ pipeline launch	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8668	Story	Ready for SQA	Ize Imai	Extend WGS pipeline launch Kafka messages to include previous pipeline job IDs	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8330	Story	In Progress	Ray Ward	SPIKE: Library Prep: Bulk Retest page performance enhancements	fix_versions: pattern mismatch ['WES/WGS 1.0.4.8 (LOPS-WESWGS-1.0.4.8)']

LOPS WES/WGS 20260209 (62) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9638	Story	Verified	Dennis Lin	Add workflow step to Log Exception Pop-up	fix_versions: pattern mismatch ['WES/WGS 1.0.4.6 (LOPS-WESWGS-1.0.4.6)']

LOPS WES/WGS 20260126 (61) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9497	Story	Verified	Dennis Lin	Add Pre-Amp and Post Amp menus to be part of Read-only access	fix_versions: pattern mismatch ['WES/WGS 1.0.4.6 (LOPS-WESWGS-1.0.4.6)']

LOPS WES/WGS 20251229 (59) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9239	Story	Verified	Monish Grover	Study ID- Add Study column to Array Sample List	fix_versions: pattern mismatch ['WES/WGS 1.0.4.4 (LOPS-WESWGS-1.0.4.4)']

LOPS WES/WGS 20251117 (56) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7792	Story	Verified	Ray Ward	Allow multiple sample selection on Assay QC NtrSampleAnalysisReview page	fix_versions: pattern mismatch ['WES/WGS 1.0.4.3 (LOPS-WESWGS-1.0.4.3)']

LOPS WES/WGS 20251020 (54) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-6717	Story	Verified	Swati Giri	Support e-Signatures in Histopathology workflow	fix_versions: pattern mismatch ['WES/WGS 1.0.4.2 (LOPS-WESWGS-1.0.4.2)']

LOPS WES/WGS 20251006 (53) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8815	Story	Closed	Ize Imai	Enable BAM merge support for WGS tissue samples	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8737	Story	Verified	Kevin Detweiler	WES/Sig GHP: Update Extraction QC Max Threshold for Tissue CLIA Sample and Tissue Control	fix_versions: pattern mismatch ['WES/WGS 1.0.4.0 (LOPS-WESWGS-1.0.4.0)']
LOPS-7963	Story	Verified	Ize Imai	[Back-End] LOPS: Verify receipt of Study ID from ARM Kafka Schema	fix_versions: pattern mismatch ['WES/WGS 1.0.4.0 (LOPS-WESWGS-1.0.4.0)']

LOPS WES/WGS 20250922 (52) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9363	Story	Ready for SQA	Ize Imai	Update the paramlists to V2	fix_versions: pattern mismatch ['WES/WGS 1.0.5.0 (LOPS-WESWGS-1.0.5.0)']
LOPS-8351	Story	Verified	Monish Grover	Sequencing: WES Sequencing In Progress	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8157	Story	Verified	Kevin Detweiler	Sequencing: WES Sequencing Review	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']

LOPS WES/WGS 20250908 (51) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8394	Story	Verified	Monish Grover	Sequencing: Updates to Menu and Sidebar	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8360	Story	Verified	Swati Giri	Sequencing: WES Primer Design In Progress	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8354	Story	Verified	Monish Grover	Sequencing: WGS Sequencing In Progress	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8350	Story	Verified	Dennis Lin	Refactor Histology Create Tissue Slides return to Histo Accessioning Page	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8270	Story	Verified	Dennis Lin	Sequencing: Update GUI Policy to Lock Sidebar	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8210	Story	Verified	Dennis Lin	Sequencing: WGS New Sequencing Prep Run Details Task	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8163	Story	Verified	Kevin Detweiler	Sequencing: WGS Sequencing	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8162	Story	Verified	Swati Giri	Sequencing: WGS Sequencing Prep	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8161	Story	Verified	Dennis Lin	Sequencing: WGS Pool Prep	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8158	Story	Verified	Swati Giri	Sequencing: WES Primer Design Review	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8156	Story	Verified	Abdul Aziz	Sequencing: WES Sequencing	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8154	Story	Verified	Swati Giri	Sequencing: WES Capture QC Review	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8152	Story	Verified	Swati Giri	Sequencing: WES Capture Quant	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8151	Story	Verified	Swati Giri	Sequencing: WES Capture Enrichment	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8094	Story	Verified	Swati Giri	Sequencing: WES Hyb ATC Page	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8089	Story	Closed	Monish Grover	Create Sequencing Sitemap for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-6234	Story	Verified	Dennis Lin	Hybridization Thermal Cycler: Support 'Hybridization Thermal Cycler' Run Details Task	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']

LOPS WES/WGS 20250825 (50) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8362	Story	Verified	Swati Giri	Sequencing: WGS Primer Design In Progress	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8155	Story	Verified	Swati Giri	Sequencing: WES Sequencing Prep	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8093	Story	Verified	Monish Grover	Sequencing: WES HybridCapture Page	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8090	Story	Verified	Swati Giri	Create Sequencing Sidebar for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.3.0 (LOPS-WESWGS-1.0.3.0)']
LOPS-8047	Story	Verified	Abdul Aziz	Library Prep & QC: Array list of Extraction Quant Samples is Grouped by Sample Subtype	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7809	Story	Verified	Swati Giri	Library Prep & QC Jobtype and Page Security Updates	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7805	Story	Verified	Kevin Detweiler	Library Prep & QC: WES & WGS Extraction QC Review Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7796	Story	Verified	Monish Grover	Library Prep & QC: WES Library Quant Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7795	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library Amp Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7793	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Library Prep Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7791	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Fragmentation Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7789	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Normalization Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7787	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library QC Review Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7786	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Extraction Quant Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7784	Story	Verified	Swati Giri	Create Library Prep & QC Sidebar for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7783	Story	Verified	Monish Grover	Create Library Prep & QC Sitemap for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']

LOPS WES/WGS 20250811 (49) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8034	Story	Verified	Dennis Lin	Histopathology: View pathologist's H&E Data Entry information on Tumor Tissue Dissection Page	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7962	Story	Verified	Dennis Lin	WES/WGS Create task to resend assay complete message in bulk (repo update)	fix_versions: pattern mismatch ['WES/WGS 1.0.1.2 (LOPS-WESWGS-1.0.1.2)']
LOPS-7943	Story	Verified	Swati Giri	Histology: Move Assay Description to be between Natera Barcode and File Storage Number (Tumor Tissue Dissection Page)	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7935	Story	Verified	Kevin Detweiler	Extraction: Performance Enhancements for Box List (Rack to plate page)	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7932	Story	Verified	Dennis Lin	Extraction: Update filter to remove Disposed Plates from WES/WGS Blood Extraction, WES/WGS DNA Extraction and WES/WGS Ti	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7931	Story	Verified	Abdul Aziz	Extraction: Update filters on Sample Receipt page to remove Positive Controls	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7927	Story	Verified	Dennis Lin	Histopathology: Remove # of Slides (Raw Value) during Data Entry	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7922	Story	Verified	Ray Ward	WES/WGS During Primer Design Assay Creation, fetch only "Selected" source samples from Blood and Tissue Assays	fix_versions: pattern mismatch ['WES/WGS 1.0.1.2 (LOPS-WESWGS-1.0.1.2)']
LOPS-7920	Story	Verified	Abdul Aziz	Histology: Update filter to remove Disposed samples from H&E staining and Tumor Tissue Dissection page	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7871	Story	Verified	Swati Giri	Histology: Candidate for rework data entry location for external cases	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7870	Story	Verified	Abdul Aziz	Extraction: Inform users if sample has been plated already or is a rework sample	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7869	Story	Verified	Kevin Detweiler	Histology: Ability to edit file storage # on Accessioning and Sample Manage Page	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7867	Story	Verified	Kevin Detweiler	Histology: Display number of cases in sidebar under Tumor Tissue Dissection	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7866	Story	Verified	Abdul Aziz	Histology: Display Assay Description under internal step in Tumor Tissue Dissection>Create TXE Tube	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7808	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant Tapestation Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7807	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant qPCR Pages	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']
LOPS-7727	Story	Verified	Dennis Lin	Allow EPS access to the "remove" button in the source samples element	fix_versions: pattern mismatch ['WES/WGS 1.0.2.0 (LOPS-WESWGS-1.0.2.0)']

LOPS WES/WGS 20250728 (48) (82 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9622	Story	Closed	Monish Grover	CLONE - Extraction: WGS/WES Blood Download Worklist Count	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-9621	Story	Ready for SQA	Peter Riggs	GHPv2 - Extraction Sitemap URL Links for GUIDE Project	fix_versions: empty
LOPS-9619	Story	In Progress	Peter Riggs	GHPv2 -Extraction: GHPv2 Blood Download Worklist	fix_versions: empty
LOPS-9618	Story	In Progress	Peter Riggs	GHPv2 - Extraction: Blood Sample Receipt Page	fix_versions: empty
LOPS-9617	Story	In Progress	Peter Riggs	GHPv2 -Extraction: WGS Blood Extraction Page	fix_versions: empty
LOPS-9616	Story	In Progress	Peter Riggs	GHPv2 -Create Extraction Sidebar	fix_versions: empty
LOPS-9615	Story	Closed	Monish Grover	GHPv2 - Create Extraction Sitemap	fix_versions: empty
LOPS-9613	Story	In Progress	Peter Riggs	GHPv2 Extraction: GHPv2 Tissue DNA Review Page	fix_versions: empty
LOPS-9612	Story	Closed	Kevin Detweiler	GHPv2- GHPv2 Extraction Sample Page - Order by Run Number	fix_versions: empty
LOPS-9611	Story	Closed	Kevin Detweiler	GHPv2 - Extraction and Histology Jobtype and Page Security Updates	fix_versions: empty
LOPS-9610	Story	Closed	Kevin Detweiler	GHPv2 - Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	fix_versions: empty
LOPS-9609	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Rack to Plate	fix_versions: empty
LOPS-9608	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue DNA Extraction Page	fix_versions: empty
LOPS-9607	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2Tube Verification Page	fix_versions: empty
LOPS-9606	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tube-to-Rack Page	fix_versions: empty
LOPS-9605	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Lysis and Decrosslinking Page	fix_versions: empty
LOPS-9604	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Deparaffinization Page	fix_versions: empty
LOPS-9603	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Select Tissue Page	fix_versions: empty
LOPS-9602	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue Sample Receipt Page	fix_versions: empty
LOPS-7735	Story	Verified	Kevin Detweiler	Histology: Add link to Assay ID on Data Entry page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7699	Story	Verified	Kevin Detweiler	Extraction Sample Page - Order by Run Number	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7690	Story	Verified	Swati Giri	Histology: Update to Histology Jobtypes and Security	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7689	Story	Verified	Kevin Detweiler	Extraction: Update Rack to Plate counter to reflect number of boxes ready for Rack to Plate	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7688	Story	Verified	Kevin Detweiler	Extraction: Create Filler Samples page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7687	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Review Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7686	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Review Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7660	Story	Verified	Kevin Detweiler	Extraction and Histology Jobtype and Page Security Updates	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7659	Story	Verified	Kevin Detweiler	Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7617	Story	Closed	Monish Grover	Extraction: Update Blood Extraction Page to link Run Detail Task to Button	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7605	Story	Verified	Monish Grover	Extraction: Update Tube to Rack Task to allow for Take Custody of Box	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7565	Story	Verified	Kevin Detweiler	Extraction: WES/WGS Select Tissue Gizmo update Counter	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7560	Story	Verified	Monish Grover	Extraction: WGS/WES Blood Download Worklist Count	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7548	Story	Verified	Kevin Detweiler	Extraction Sitemap URL Links for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7521	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Extraction Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7520	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Extraction Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7518	Story	Verified	Kevin Detweiler	Extraction: WES Rack to Plate	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7516	Story	Verified	Kevin Detweiler	Extraction: WGS Rack to Plate	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7514	Story	Verified	Kevin Detweiler	Extraction: WGS Tube Verification Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7513	Story	Verified	Kevin Detweiler	Extraction: WES Tube Verification Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7512	Story	Verified	Kevin Detweiler	Extraction: WES Tube-to-Rack Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7511	Story	Verified	Kevin Detweiler	Extraction: WGS Tube-to-Rack Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7509	Story	Verified	Kevin Detweiler	Extraction: WGS Lysis and Decrosslinking Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7508	Story	Verified	Kevin Detweiler	Extraction: WES Lysis and Decrosslinking Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7507	Story	Verified	Kevin Detweiler	Extraction: WES Deparaffinization Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7506	Story	Verified	Kevin Detweiler	Extraction: WGS Deparaffinization Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7505	Story	Verified	Kevin Detweiler	Extraction: WGS Select Tissue Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7504	Story	Verified	Kevin Detweiler	Extraction: WES Select Tissue Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7501	Story	Verified	Monish Grover	Extraction: WES AND WGS Extraction Samples Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7500	Story	Verified	Monish Grover	Extraction: WGS Blood Extraction Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7499	Story	Verified	Monish Grover	Extraction: WES Blood Extraction Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7498	Story	Verified	Monish Grover	Extraction: WES Blood Download Worklist	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7497	Story	Verified	Monish Grover	Extraction: WGS Blood Download Worklist	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7494	Story	Verified	Kevin Detweiler	Extraction: WES Blood Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7493	Story	Verified	Kevin Detweiler	Extraction: WGS Blood Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7492	Story	Verified	Kevin Detweiler	Extraction: WES Tissue Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7490	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7485	Story	Verified	Swati Giri	Histology: WES/WGS Incidents Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7483	Story	Verified	Swati Giri	Histology: WES/WGS Tissue Return Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7482	Story	Closed	—	Histology: WGS Tissue Return Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7481	Story	Verified	Swati Giri	Histology: WES/WGS Dissection Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7477	Story	Verified	Swati Giri	Histology: WES/WGS Pathology Review Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7475	Story	Verified	Swati Giri	Histology: WES/WGS H&E Staining Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7473	Story	Verified	Swati Giri	Histology: WES/WGS Embedding Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7472	Story	Closed	Swati Giri	Histology: WGS Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7466	Story	Verified	Ray Ward	Improvements to Assay QC NtrSampleAnalysisReview page for performance	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7459	Story	Closed	Swati Giri	Histology: WGS Microtomy Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7458	Story	Verified	Swati Giri	Histology: WES/WGS Microtomy Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7455	Story	Closed	Swati Giri	Histology: WGS Accessioning Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7454	Story	Verified	Swati Giri	Histology: WES/WGS Accessioning Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7453	Story	Verified	Monish Grover	Create Extraction Sidebar for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7452	Story	Verified	Monish Grover	Create Extraction Sitemap for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7449	Story	Verified	Swati Giri	Create Histology Sidebar for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7448	Story	Verified	Swati Giri	Create Histology Sitemap for GUIDE Project	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7446	Story	Verified	Swati Giri	Histology: Sample Receipt Page	fix_versions: pattern mismatch ['WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-7015	Story	Verified	Monish Grover	Active/Historical QC Batch List Pages: Support Actions: Archive/UnArchive	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)', 'WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-6902	Story	Ready for Development	Abdul Aziz	Download Normalization Worklist - WES & WGS - Code Updates	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-6798	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WES - Master Data Updates	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-6612	Story	Verified	Monish Grover	WES/WGS: Auto-Archive Arrays based on Create Date	fix_versions: pattern mismatch ['LOPS 1.2.2.0 (M9)', 'WES/WGS 1.0.1.0 (LOPS-WESWGS-1.0.1.0)']
LOPS-5454	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WGS - Code Updates	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']
LOPS-2449	Story	Closed	—	Re-batching implementation	fix_versions: empty
LOPS-2284	Story	Closed	—	Re-batching for normalization	fix_versions: empty
LOPS-1911	Story	Development Blocked	Surbhi Ray	Current Volume Tracking - WES - Code Updates	fix_versions: pattern mismatch ['LOPS 1.3.1.0 (M10)']

LOPS Production Support Issues (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9751	Story	Opened	—	Implementation of a run-/batch-level “minimum patient samples passed” threshold for Assay QC	fix_versions: empty
LOPS-8174	Story	Opened	—	Removal of the WES flowcell uniqueness check	fix_versions: empty
LOPS-8173	Story	Opened	—	Stop storing unnecessary sequencing run fields in LOPS	fix_versions: empty
LOPS-8172	Story	Opened	—	Removal of the flowcell instrument & side check	fix_versions: pattern mismatch ['WES/WGS 1.0.6.0 (LOPS-WESWGS-1.0.6.0)']
LOPS-8169	Story	Opened	—	Prevent duplicate SELECT samples from being registered in LOPS	fix_versions: empty

LOPS HiHx Impl Sprint 1 M1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2059	Story	Ready for SQA	Ize Imai	Extraction Configuration	fix_versions: pattern mismatch ['HIH - OLD']
LOPS-2058	Story	Ready for SQA	Ize Imai	Dataset/Parameters	fix_versions: pattern mismatch ['HIH - OLD']

LOPS WH 20260601 (70) (M24) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9630	Story	Ready for Development	Michael Livingston	Guided Workflow Guardrails	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.24.0 (M24)']
LOPS-9365	Story	Opened	—	Update LRPCR Primer reagent container amounts and LRPCR Barcoding AM decrement amounts	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.24.0 (M24)']

LOPS WH 20260518 (69) (M23) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9070	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Run	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.23.0 (M23)']
LOPS-9067	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Prep Final Dilution	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.23.0 (M23)']

LOPS WH 20260504 (68) (M22) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9859	Story	Opened	Michael Livingston	SPRQ work sprint 3	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.22.0 (M22)', 'SPRQ release']
LOPS-8864	Story	In Grooming	Bob Ruff	Sidebar Development -Assay 44	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.22.0 (M22)']

LOPS WH 20260420 (67) (M21) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9858	Story	In Grooming	Michael Livingston	SPRQ work sprint 2	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.21.0 (M21)', 'SPRQ release']
LOPS-8860	Story	Ready for Development	Bob Ruff	Sidebar Development - Assay 43	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.21.0 (M21)']

LOPS WH 20260406 (66) (M20) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9857	Story	In Grooming	Michael Livingston	SPRQ work sprint 1	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.20.0 (M20)', 'SPRQ release']
LOPS-9047	Story	In Grooming	Bob Ruff	Improvement - avoid stuck analysis runs	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.20.0 (M20)']
LOPS-8107	Story	Ready for Development	Bob Ruff	Ability to add Racking Retest to Parent samples easily through known children samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.20.0 (M20)']

LOPS WH 20260323 (65) (M19) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9629	Story	In Grooming	Michael Livingston	new entry point for Prof Samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.19.0 (M19)']
LOPS-9514	Story	In Progress	Michael Livingston	Deployment Strategy to Reduce or eliminate down time	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.19.0 (M19)']
LOPS-6576	Story	Ready for Development	Bob Ruff	Add additional sample identifier to Verso sample list	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.19.0 (M19)']
LOPS-5154	Story	In Grooming	Bob Ruff	LOPS support for Verso batching - sample disposal	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.19.0 (M19)']

LOPS WH 20260309 (64) (M18) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9326	Story	Ready for Development	Michael Livingston	cfDNA pool dilution worklist for HC query does not account for retests	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.18.0 (M18)']
LOPS-8898	Story	Ready for Development	Bob Ruff	Update Calculation for sgNIPT cfDNA Pool Quant Review	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.18.0 (M18)']

LOPS WH 20260223 (63) (M17) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9792	Story	Verified	Michael Livingston	Support Gene Retesting in Worklist and RunLog Processing	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.16.0 (M16)']
LOPS-8339	Story	Ready for SQA	Mehmet Ali Eken	Implement dirty data resolving mechanism when getting sample data from LIMS	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8338	Story	Ready for SQA	Mehmet Ali Eken	Send notification to LIMS when sample is disposed/biobanked in LOPS	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8337	Story	Ready for SQA	Mehmet Ali Eken	Implement authentication logic to connect to LIMS API	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8336	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge sample disposal message processing	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8335	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge assay request message processing	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8190	Story	In SQA Review	Michael Livingston	CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.17.0 (M17)']

GHPv2 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	fix_versions: empty
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	fix_versions: empty
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	fix_versions: empty
LOPS-9541	Story	Opened	—	PD Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	fix_versions: empty
LOPS-9540	Story	Opened	—	Convert LOPS->PD Pipeline Launch Message from Kafka to REST API	fix_versions: empty
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	fix_versions: empty

G64onLOPS Sprint 9 (24) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3664	Story	Closed	Brad Garrett	Finish Normalization - Tissue	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3573	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3572	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail & Re-Extract	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3515	Story	Closed	Jose Valdivieso	Worklist title for WGS blood extraction file	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2927	Story	Closed	Brad Garrett	Start Normalization - Tissue	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2898	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction - platform	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS 1.1.0.0']
LOPS-2837	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-2836	Story	Closed	Brad Garrett	6-Rack To Plate	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2524	Story	Closed	Mikhail Terpugov	Start Tapestation Plate Setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1944	Story	Closed	Klead Fusha	Start qPCR Plate Setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1943	Story	Closed	Gianna Bell-Eunice	Finish Library Amp	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-1936	Story	Closed	Brad Garrett	Tissue Extraction Quantification	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 8 (23) (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3449	Story	Closed	Hani Yakan	Modify WGS Group TM to remove child sample plan details	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-3432	Story	Closed	Olawale Dada	Adding WGS TM to Tissue workflows	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3288	Story	Closed	Hani Yakan	Update-WGS-Tissue-Sample-Master-Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3110	Story	Closed	Klead Fusha	Support G64 extraction quant plate barcode suffixes	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-3077	Story	Closed	—	Validate controls for WGS Normalization - Test Only	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2783	Story	Closed	Olawale Dada	3-Lysis and decrosslinking Button and Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2782	Story	Closed	Jose Valdivieso	2-Deparaffinization Button and Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-2780	Story	Closed	Brad Garrett	5-Tube Verification	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2779	Story	Closed	Brad Garrett	4-Tube To Rack	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1938	Story	Closed	Hani Yakan	Finish Normalization	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']

G64onLOPS Sprint 6 (21) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2852	Story	Closed	Brad Garrett	Create WGS Blood workflows	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-1942	Story	Closed	Gianna Bell-Eunice	Start Library Amp	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-1941	Story	Closed	Gianna Bell-Eunice	Finish Library Prep	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']
LOPS-1940	Story	Closed	Ron Enson	Start Library Prep	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-21', 'LOPS 1.1.0.0']

G64onLOPS Sprint 5 (20) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2781	Story	Closed	Hani Yakan	1-Select Tissue Samples Button and Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2451	Story	Closed	Ron Enson	Create WGS Library Prep Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2225	Story	Closed	Hani Yakan	Process results for WGS extraction quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2224	Story	Closed	Ron Enson	Process rundata for WGS extraction quant plate setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2223	Story	Closed	Ron Enson	Generate worklist for WGS extraction quant plate setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']

G64onLOPS Sprint 4 (19) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2474	Story	Closed	Gianna Bell-Eunice	Create WGS Library Amp and WGS Library Prep Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2378	Story	Closed	Hani Yakan	Create WGS Normalization Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.1.0.0']
LOPS-2259	Story	Closed	Brad Garrett	WGS Blood Extraction QC Review	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-DEV-20', 'LOPS 1.1.0.0']
LOPS-2222	Story	Closed	Ron Enson	Create WGS extraction quant master data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.1.0.0']
LOPS-2201	Story	Closed	Gianna Bell-Eunice	Page to review WGS blood extraction results	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2200	Story	Closed	Gianna Bell-Eunice	Assay Template for WGS Tissue	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.1.0.0']
LOPS-1939	Story	Closed	Gianna Bell-Eunice	Perform Fragmentation	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1937	Story	Closed	Brad Garrett	Start Normalization - Blood	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-19', 'LOPS 1.1.0.0']

G64onLOPS Sprint 2 (17) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2346	Story	Closed	Brad Garrett	WGS Blood Extraction rundata processor	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-18', 'LOPS 1.1.0.0']
LOPS-2227	Story	Closed	Brad Garrett	WGS Blood Extraction worklist generator	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-17', 'LOPS 1.1.0.0']
LOPS-2198	Story	Closed	Hani Yakan	Assay Template for WGS Blood	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-17', 'LOPS 1.1.0.0']
LOPS-2195	Story	Closed	Ron Enson	Create WGS blood extraction master data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS-MVP-17', 'LOPS 1.1.0.0']

G64onLOPS Sprint 17 (32) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5170	Story	Closed	—	WES/WGS: Access for Pathologist User (Test Only)	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-5161	Story	Closed	—	WES/WGS: Access for Histology User (Test Only)	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 16 (31) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5116	Story	Closed	—	WGS: Access for Extraction User (Test Only)	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-5030	Story	Closed	Michael Livingston	Add validation on buttons for tapestation and qpcr QC Review	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-5001	Story	Closed	Brad Garrett	Update ProcessType used for WGS at Blood Extraction to WES ProcessType to support QS Processing	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4840	Story	Closed	Michael Livingston	Median calculation code in Lib Quant needs to handle blank entries	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4765	Story	Closed	Brad Garrett	Test Only - Automatically launch WGS pipeline when sequencing is complete - Unhappy Path	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3921	Story	Closed	Mikhail Terpugov	Review combined Library Quant Results - Re-quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3858	Story	Closed	Mikhail Terpugov	Tissue Library QC Review: Action > Fail & Re-Extract	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3857	Story	Closed	Mikhail Terpugov	Blood Library QC Results Review: Action > Fail & Re-Extract	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2281	Story	Closed	—	WGS Assay Cancellation - Test only	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1970	Story	Closed	—	Rework from Assay QC	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1969	Story	Closed	—	(Test only) Support Exception from Assay QC Review	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1967	Story	Closed	—	Retrigger WGS pipeline - Test only	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 15 (30) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4882	Story	Closed	—	Test Only - Promote Results to Source Array	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4849	Story	Closed	Michael Livingston	Remove KIT-000108 from Seq Prep	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4572	Story	Closed	Brad Garrett	Add pool metrics for signateraWGSPairRunMetrics metric profile	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3920	Story	Closed	Mikhail Terpugov	Tapestation Results Review - Re-quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1965	Story	Closed	Brad Garrett	Test Only - Automatically launch Primer Design pipeline when assay request is received	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1964	Story	Closed	Brad Garrett	Receive Assay QC DAQ and PD Metrics	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 14 (29) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4788	Story	Closed	—	Test Only - WGS tissue must have PRO0022275 instead of PRO0014905	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4711	Story	Closed	Klead Fusha	The system shall prevent boxes with duplicate barcodes from being created.	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'WES X: Platform PostLaunch P1', 'LOPS M4 (1.0.4.0)', 'LOPS 1.1.0.0']
LOPS-4543	Story	Closed	Klead Fusha	Rework scenario from LOPS-1948	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-4088	Story	Closed	Michael Livingston	Ensure input(s) are entered for tumor purity field(s) for Macrodissection	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'WES X: Platform Post Launch', 'LOPS M4 (1.0.4.0)', 'LOPS 1.1.0.0']
LOPS-3919	Story	Closed	Mikhail Terpugov	qPCR Results Review - Re-quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3856	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for Tissue	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3815	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for blood	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1972	Story	Closed	Klead Fusha	Filler Samples assay templates	fix_versions: pattern mismatch ['G64 Go-Live: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1922	Story	Closed	Brad Garrett	Update Pipeline Launch Request to support GHP Primer Design Assay Code for sending DAQ Job ID	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS 1.1.0.0']

G64onLOPS Sprint 13 (28) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4546	Story	Closed	Michael Livingston	Record the equipment ID for Tapestation and qPCR	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1963	Story	Closed	Klead Fusha	Automatically launch WGS pipeline when sequencing is complete	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1953	Story	Closed	Klead Fusha	Finish Sequencing	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1952	Story	Closed	Michael Livingston	Start Sequencing	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1951	Story	Closed	Brad Garrett	Sequencing Prep	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 12 (27) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4113	Story	Closed	Mikhail Terpugov	Record WGS Blood Extraction Run Details	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3906	Story	Closed	—	qPCR Results Review	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3860	Story	Closed	Mikhail Terpugov	Tapestation Results Review	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3855	Story	Closed	Michael Livingston	Blood Extraction QC Results Review: Action > Fail & Re-Extract	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3738	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3683	Story	Closed	—	Start qPCR Plate Setup - Blood, Test only	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2902	Story	Closed	Brad Garrett	Pool Prep	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2521	Story	Closed	Klead Fusha	Process qPCR file for Library Quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS 1.1.0.0']
LOPS-1949	Story	Closed	Klead Fusha	Finish Consolidation	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1948	Story	Closed	Klead Fusha	Start Consolidation and Master Data	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1947	Story	Closed	Klead Fusha	Review combined Library Quant Results	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-1919	Story	Closed	Michael Livingston	Sequencing Master Data for WGS DAQ	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 11 (26) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3985	Story	Closed	Klead Fusha	Array Status Rule after applying new Array Method	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS 1.1.0.0']
LOPS-3890	Story	Closed	Michael Livingston	Validate: Cannot Re-Quant Plate after Extraction QC Review is Completed	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3821	Story	Closed	Michael Livingston	Support "Accept Partial" Action for Blood Extraction DNA Plate at 'Extraction QC	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3734	Story	Closed	Michael Livingston	Extraction QC Review > Approve Plate: "Accept Partial" and Log Exception for Failed Tissue Sample	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3653	Story	Closed	—	Re-verification of the Blood Extraction workflow - Test-Only	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-3614	Story	Closed	Michael Livingston	Tissue Extraction QC Results Review: Action > Fail & Re-Extract	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2543	Story	Closed	Mikhail Terpugov	Finish Tapestation Plate Setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2522	Story	Closed	Mikhail Terpugov	Process Tapestation file for Library Quant	fix_versions: pattern mismatch ['G64 E2E: LOPS Platform', 'LOPS 1.1.0.0']
LOPS-1945	Story	Closed	Klead Fusha	Finish qPCR Plate Setup	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

G64onLOPS Sprint 10 (25) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3654	Story	Closed	—	Re-verification of the Pre-Amp workflow - Test-Only	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']
LOPS-2839	Story	Closed	Brad Garrett	8-Tissue Re-Rack	fix_versions: pattern mismatch ['G64 E2E: LOPS Implementation', 'LOPS 1.1.0.0']

LOPS Sprint 20241230 (33) (31 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5313	Story	Closed	Isaac Vargas	Update Array Method for Sequencing Parameters	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5204	Story	Verified	Gianna Bell-Eunice	cfDNA Sequencing Run Complete RunDetails addition, gDNA Seq Run update	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5183	Story	Closed	Mai Ton-Nu	Create Sequencing Run Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5182	Story	Closed	Mai Ton-Nu	Create Sequencing Pool Dilution Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5152	Story	Verified	Laura Dietrick	gDNA Group Test method reorganization Update	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5150	Story	Verified	Krishna Tanuku	Update to resolve issue seen for recalc retrigger on cfDNA Pool Quant array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5145	Story	Verified	Monish Grover	Updates to gDNA Library Prep Test methods, parameter List and Array Methods	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5139	Story	Verified	Kathy Dao	Configure Verso Freezer StorageUnitType	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5114	Story	Verified	Krishna Tanuku	gDNA Sequencing Run Complete RunDetails Test method and PL	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5109	Story	Verified	Monish Grover	gDNA LR-PCR Pool Purification array method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5105	Story	Verified	Krishna Tanuku	Updates to cfDNA sequencing done complete message	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5072	Story	Closed	Kevin Detweiler	WES: 'Lab Ops' User Access to QC Report (Test Only)	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-5068	Story	Verified	Vasiliy Kumaev	Build Generate Worklist on Box List page for Library Prep End Repair	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5059	Story	Verified	Monish Grover	Update to Pool Dilution array transfer method	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5054	Story	Verified	Laura Dietrick	Updates to cfDNA barcode primer plates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5049	Story	Closed	Mikhail Terpugov	Workflow for missing sample from shipment	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5046	Story	Verified	Krishna Tanuku	Update name and description for LibPrep Quant to PostLib Quant test method, param list, spec	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5035	Story	Closed	Ron Enson	Update tfMRD Post Extraction Assay Template	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4932	Story	Verified	Krishna Tanuku	Array Methods Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4902	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (more than one topic)	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4624	Story	Verified	Gianna Bell-Eunice	LR-PCR Quantification array method Calculation Updates	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4612	Story	Closed	—	gDNA extraction quantification worklist generation	fix_versions: empty
LOPS-4425	Story	Closed	Mai Ton-Nu	Array Method for Size Selection Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4414	Story	Closed	Isaac Vargas	Reagent Import for Size Selection	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4176	Story	Closed	Mikhail Terpugov	Identify which samples are missing or mismatched from the S2S shipment	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4174	Story	Verified	Vadim Gusev	Implement integration module with PIPE API Server	fix_versions: pattern mismatch ['sgNIPT E2E']
LOPS-4112	Story	Verified	Olawale Dada	Update gDNA Sequence Pool Dilution TM, PM, and Array Method to "sgNIPT gDNA Pool Dilution"	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4101	Story	Verified	Laura Dietrick	gDNA LR-PCR Primer plate setup (HBA)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4026	Story	Verified	Laura Dietrick	cfDNA Master Mix part number set up (MM0004-MM0008)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3933	Story	Verified	Lev Evstratov	Update the current query NtrQCBatchSelectExisitingBatch	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3594	Story	Closed	Valeria Vargas	LOPS configuration required for LV Boxes and Packages	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS tfMRD Sprint 6 (32) (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5224	Story	Closed	Ron Enson	Parameter Updates for Post-Pooling Quantification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5223	Story	Closed	Ron Enson	Parameter Updates for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5222	Story	Closed	Ron Enson	Parameter Updates for Library Amplification Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5221	Story	Closed	Ron Enson	Parameter Updates for Library Amplification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5220	Story	Closed	Ron Enson	Parameter Updates for Methylation Steps	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5217	Story	Closed	Ron Enson	Parameter Updates for Size Selection Quantification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5213	Story	Closed	Ron Enson	Parameter Updates for Size Selection	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5184	Story	Closed	Isaac Vargas	Create Blood Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5174	Story	Closed	Ron Enson	Create Size Selection Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5141	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Sequencing RunDetails	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5127	Story	Closed	Isaac Vargas	Create Size Selection Quantification Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5126	Story	Closed	Isaac Vargas	Create Pool Quantification Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5044	Story	Closed	Ron Enson	Array Transfer Method for Library Amplification Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5041	Story	Closed	Isaac Vargas	Array Method for Sequencing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4669	Story	Closed	Ron Enson	Create Blood Extraction Assay Template	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4529	Story	Closed	Ron Enson	Array Method for Pool Dilution	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4527	Story	Closed	Isaac Vargas	Array Transfer Method for Pool Dilution	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4526	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Pool Dilution	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4508	Story	Closed	Ron Enson	Array Method for Post Amplification Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4422	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Size Selection Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4392	Story	Closed	Isaac Vargas	Standard Test Method and Parameter List for Plasma Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3965	Story	Closed	Ron Enson	Plasma group test methods - Plasma Process and Plasma Manual Process	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 32 (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	fix_versions: empty
LOPS-5172	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2)	fix_versions: empty
LOPS-4901	Story	Verified	Mikhail Makarin	Illumina NGS - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete messa	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4808	Story	Verified	Alex Pakhunov	Update logic for retriggering Pipeline Launch Request	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4787	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (one topic)	fix_versions: pattern mismatch ['LOPS 1.1.1.0 (M6)']
LOPS-4708	Story	Verified	Vadim Gusev	Implement request conversion logic for LRPCR requests	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4702	Story	Verified	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Continue	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4169	Story	Verified	Lev Evstratov	Support Hybrid Capture (ASSAY-00043) Assay Request Messages with sequencingSampleReference	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3751	Story	Verified	Ize Imai	Support Assay Template specificity in Exception Logging	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3593	Story	Closed	Valeria Vargas	Notify tfMRD lab of upcoming shipment/transfer	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3558	Story	Closed	Valeria Vargas	Create new Reflex Assay Request Handler for post-extraction assays where the sample that requires testing is not yet in	fix_versions: empty
LOPS-3392	Story	Verified	Lev Evstratov	Display Natera barcode in QC Batch creation page	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1551	Story	Verified	Lev Evstratov	NGS - Sequencing Run Complete Processing Code	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1542	Story	Verified	Leonid Garin	PacBio LR-PCR - Sequencing Run Complete Processing Code	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS tfMRD Sprint 5 (31) (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5048	Story	Closed	Isaac Vargas	Array Method for Post-Pooling Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5042	Story	Closed	Isaac Vargas	Create Library Amplification Quantification Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5025	Story	Closed	Ron Enson	QC Method for Plasma Manual/Partial Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5024	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Plasma Manual/Partial Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4963	Story	Closed	Isaac Vargas	Array Transfer Method for Deamination Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4962	Story	Closed	Isaac Vargas	Array Transfer Method for Oxidation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4961	Story	Closed	Isaac Vargas	Array Transfer Method for Ligation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4954	Story	Closed	Isaac Vargas	Array Transfer Method for Second Size Selection	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4833	Story	Closed	Ron Enson	Array method for Sample Plating cfDNA Plate	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4832	Story	Closed	Isaac Vargas	Standard Test Method and Parameter List for Sample Plating and First Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4662	Story	Closed	Isaac Vargas	Create Library Amplification Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4535	Story	Closed	Isaac Vargas	Standard Test Method and Parameter List for Post-Pooling Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4534	Story	Closed	Hani Yakan	Array Method for Post-Pooling Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4532	Story	Closed	Hani Yakan	Array Transfer Method for Post-Pooling Quantification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4531	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Post-Pooling Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4506	Story	Closed	Isaac Vargas	Standard Test Method and Parameter List for Post Amplification Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4505	Story	Closed	Ron Enson	Array Method for Post Amplification Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4503	Story	Closed	Ron Enson	Array Transfer Method for Post Amplification Quantification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4502	Story	Closed	Isaac Vargas	Standard Test Method and Parameter List for Post Amplification Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4499	Story	Closed	Ron Enson	Array Method for Library Amplification Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4448	Story	Closed	Ron Enson	Array Method for Ligation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4435	Story	Closed	Isaac Vargas	Array Method and Array Transfer Method for Normalization	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4419	Story	Closed	Isaac Vargas	Array Method for Size Selection 2	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4398	Story	Closed	Ron Enson	QC Method for cfDNA Extraction	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4396	Story	Closed	Ron Enson	Standard Test Method and Parameter List for cfDNA Extraction	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3966	Story	Closed	Isaac Vargas	QC Method for Plasma Isolation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 31 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5015	Story	Verified	Vasiliy Kumaev	cfDNA Library Prep Worklist Policy Configuration	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4623	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing (part 2)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4544	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite storage unit with null value	fix_versions: pattern mismatch ['RS M3 (1.0.3.0)']
LOPS-4105	Story	Verified	Vasilii Sevriugin	Record Pipeline Job Status from Pipeline Launch API Response	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3823	Story	Verified	Alex Pakhunov	Array and QC Batch information displayed on Sample Maint and Manage Test list pages	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3784	Story	Verified	Ize Imai	Display only first Sample Barcode in Sample Barcode column on QC Batch list page	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3592	Story	Closed	Valeria Vargas	Record shipping information for S2S	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-3534	Story	Verified	Vasiliy Kumaev	Create API endpoint for RIR	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3533	Story	Verified	Vasiliy Kumaev	Provide RIR with file paths and other info	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2528	Story	Verified	Vasiliy Kumaev	Build Worklist Generation Policy and Processor Framework	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS tfMRD Sprint 4 (30) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4829	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Second Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4828	Story	Closed	Hani Yakan	Array Method for Second Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4715	Story	Closed	Isaac Vargas	tfMRD Hybrid Capture Layouts	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4665	Story	Closed	Ron Enson	Create tfMRD Post Extraction Assay Template	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4663	Story	Closed	Kersha Eddy	Create Methylation Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4523	Story	Closed	Isaac Vargas	Array Method for Post-Capture Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4520	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Post-Capture Processing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4515	Story	Closed	Ron Enson	Array Method for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4512	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Hybrid Capture	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4488	Story	Closed	Ron Enson	Array Method for Deamination Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4483	Story	Closed	Kersha Eddy	Array Method for Deamination	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4476	Story	Closed	Kersha Eddy	Array Method for Denaturation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4471	Story	Closed	Kersha Eddy	Array Method for Oxidation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4466	Story	Closed	Kersha Eddy	Array Method for Oxidation Stop	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4453	Story	Closed	Ron Enson	Array Method for Ligation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4428	Story	Closed	Ron Enson	Array Method for Size Selection Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4426	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Size Selection Quantification Reading	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4420	Story	Closed	Isaac Vargas	Array Transfer Method for Size Selection Quantification Prep	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4416	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Size Selection 2	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4413	Story	Closed	Kersha Eddy	Array Method for Size Selection 1	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4411	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Size Selection 1	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 30 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4809	Story	Verified	Ize Imai	Refactor u_sourcesystem to u_ntrsystem	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4709	Story	Verified	Vadim Gusev	Implement request conversion logic for Algs requests	fix_versions: pattern mismatch ['sgNIPT E2E']
LOPS-4633	Story	Verified	Brandon Culver	Update sgNIPT Plate Worklist Task button to use new worklist policy	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4606	Story	Closed	Alex Pakhunov	Reagent Sync: Unit conversion	fix_versions: pattern mismatch ['RS M3 (1.0.3.0)']
LOPS-4549	Story	Closed	Ron Enson	Add 'General' consumable class	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4149	Story	Closed	Ron Enson	Add Natera Lot Number column to the LV_ReagentSampleList page	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-3875	Story	Verified	Lev Evstratov	Update QCBatchdataentry>Detail Panel to include Natera Barcode or add Natera barcode directly on page	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 29 (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4761	Story	Closed	Kevin Detweiler	Restrict the ability for the Instrument RO role to Add or Edit Instrument Notes	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4760	Story	Closed	Kevin Detweiler	Update Hyperlinks on Tramlines	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4627	Story	Verified	Mikhail Makarin	Filter out ARM messages for non-LOPS assay codes	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M4 (1.0.4.0)']
LOPS-4585	Story	Closed	Kevin Detweiler	Updates to Existing Jobtypes based on needed changes for ReadOnly jobtype	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4579	Story	Closed	Kevin Detweiler	Additional Role configuration on Incidents related pages	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4578	Story	Closed	Kevin Detweiler	Additional Role configuration on the Consumables related pages	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4575	Story	Closed	Kevin Detweiler	Additional Role Configuration for Storage related pages	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4574	Story	Closed	Kevin Detweiler	Additional Role configuration for Test related Pages	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4571	Story	Closed	Kevin Detweiler	Role Configuration for Request related pages	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-4569	Story	Verified	Lev Evstratov	Remove OOB field 'quantity' that is no longer in use on workitemchildsampleplan element on the test method maint page	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4545	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite original securitydepartment	fix_versions: pattern mismatch ['RS M3 (1.0.3.0)']
LOPS-4194	Story	Closed	Kevin Detweiler	Additional Role configuration on AQC Batches related pages	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']
LOPS-4100	Story	Verified	Vasiliy Kumaev	Provide Natera barcode on Load Array page and update scan to allow Natera Barcode	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4014	Story	Verified	Ize Imai	Remove the logic for exception sourceSystem and status in the Assay Complete message	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4008	Story	Closed	Ron Enson	Reagents team needs ability to see the data entry button and enter results on samples	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M3 (1.0.3.0)']
LOPS-3895	Story	Closed	Vasiliy Kumaev	Transaction Reprocessing Improvements	fix_versions: pattern mismatch ['LOPS M4 (1.0.4.0)']
LOPS-3874	Story	Verified	Lev Evstratov	Update QCBatchItemLookup to have ability to scan and display Natera barcodes	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3781	Story	Verified	Lev Evstratov	Expand visible width for Transfer Method ID in LOPS UI	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3762	Story	Verified	Lev Evstratov	ARM transaction is Not Processed if If the Exception block contains an Exception Code that is not configured in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2996	Story	Verified	Ize Imai	Container type is unable to be associated with sample type for child sample plan	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2411	Story	Verified	Vasiliy Kumaev	The system shall have the ability to automatically create pooled samples after performing a required test	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1983	Story	Closed	Kevin Detweiler	Read Only Job Type	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']

tfMRD Sprint 3 (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4664	Story	Closed	Ron Enson	Create Library Prep Process Group Test Method	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4498	Story	Closed	Hani Yakan	Standard Test Method and Parameter List for Library Amplification Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4491	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Library Amplification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4486	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Deamination Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4480	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Deamination	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4473	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Denaturation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4469	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Oxidation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4463	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Oxidation Stop	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4459	Story	Closed	Kersha Eddy	Array Method for Oxidation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4456	Story	Closed	Kersha Eddy	Standard Test Method and Parameter List for Oxidation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4451	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Ligation Purification	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4445	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Ligation	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4441	Story	Closed	Hani Yakan	Array Method for ER and A-Tailing	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4432	Story	Closed	Ron Enson	Standard Test Method and Parameter List for Normalization	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4403	Story	Closed	Isaac Vargas	tfMRD Sample Plate Layout	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']

LOPS Sprint 28 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4192	Story	Closed	Kevin Detweiler	Additional Role configuration on samples pages	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']
LOPS-4191	Story	Closed	Kevin Detweiler	Create additional Roles	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']
LOPS-4129	Story	Closed	Ron Enson	Create a new button on Consumable-related pages.	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']
LOPS-4049	Story	Verified	Ize Imai	Update Exception SDC to include sourceSystem and status	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4023	Story	Verified	Ize Imai	Include sourceSystem and status for Exceptions generated in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3950	Story	Closed	Lev Evstratov	Support Assay Request Messages with ERROR or CANCEL action codes	fix_versions: empty
LOPS-3782	Story	Verified	Hani Yakan	Update SampleTypeTmPlateLoad query in LOPS	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3323	Story	Closed	Leonid Garin	Replace lvtransprocessor scheduled task with a db trigger to handle transaction processing	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M3 (1.0.3.0)']
LOPS-2242	Story	Closed	Kevin Detweiler	Update the LIMS Menu for Read-Only Jobtype	fix_versions: pattern mismatch ['LOPS M3 (1.0.3.0)']
LOPS-1491	Story	Closed	Ron Enson	Decommissioned Instruments	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M3 (1.0.3.0)']
LOPS-1037	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']

LOPS Sprint 27 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4120	Story	Verified	Ron Enson	Add 'Tracer' to the Reagent Class reftype	fix_versions: empty
LOPS-4118	Story	Verified	Ron Enson	Add the button configured in LOPS-3513 to additional consumable list pages	fix_versions: empty
LOPS-4107	Story	Verified	Hani Yakan	Create LV1.0 users that are not going to exist in LOPS as users in LOPS with a de-activated status.	fix_versions: empty
LOPS-4017	Story	Closed	Ron Enson	Add u_commonname back to the instrument sdc	fix_versions: empty
LOPS-1670	Story	Verified	Vasiliy Kumaev	Implement way to Disposition Wet Lab Only Assays	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1329	Story	Closed	Mai Ton-Nu	Review reagents data in LV1.0 / LOPS after sync is enabled	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-961	Story	Closed	Meghana Joshi	Historical Reviews	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M2 (1.0.2.0)']

tfMRD Sprint 1 (LOPS 27) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3964	Story	Closed	Ron Enson	Isolation test method and param list	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation']

LOPS Sprint 26 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3947	Story	Closed	Mikhail Makarin	For Arrays/Plates, set security at the site level rather than the testing lab.	fix_versions: pattern mismatch ['WES X: Platform PostLaunch P1', 'LOPS M3 (1.0.3.0)']
LOPS-3944	Story	Closed	Mai Ton-Nu	Migration of Instrument-related Master Data Items from LV1.0 to LOPS	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3903	Story	Closed	Vladimir Piyanov	Update SamRep message processing to Measurement object optional	fix_versions: pattern mismatch ['ARM Preview / ACCN 2.0', 'LOPS M1 (1.0.1.0)']
LOPS-3568	Story	Closed	Alex Pakhunov	Data Mesh - Array Package	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3343	Story	Closed	Meghana Joshi	Platform - Update Test Methods for Re-Run Samples Scheduled for Blood Extraction/Histopathology	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3261	Story	Closed	Alex Pakhunov	Create a python script for creating and delivering files to aws s3 bucket	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1493	Story	Closed	Alex Pakhunov	Instrument Sync to LV1.0	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1382	Story	Verified	Leonid Garin	Data Mesh - Reagent Lot Package	fix_versions: pattern mismatch ['WES X: Platform Launch']

LOPS Sprint 24 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3844	Story	Closed	Alex Pakhunov	Additional Instrument fields synchronization LOPS to LV 1.0	fix_versions: empty
LOPS-3648	Story	Closed	Vasiliy Kumaev	Update validations and remove e-signature from "Complete Assay QC" Button	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3520	Story	Verified	Mikhail Makarin	Create a way to retrigger the Assay Complete message from the Assay list and maint page	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-3514	Story	Closed	Valeria Vargas	New button for the LOPS Reagent Qualification Report on both the Active Lots and the Lots Pending Approval list pages.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3513	Story	Closed	Ron Enson	Add the a button to navigate to samples for review from consumable pages	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3512	Story	Closed	Gianna Bell-Eunice	Make the Expiry Date field mandatory on the LV_ReagentLotMaintPage	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3500	Story	Closed	Lev Evstratov	Add additional page queries to the Array List page for Assay QC	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3451	Story	Closed	Mai Ton-Nu	Migrate Instrument master data from from LV1.0 to LOPS	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3439	Story	Closed	Vasiliy Kumaev	Wes On X: QC Review - Accept Partial action doesn't release quant result datasets & TM doesn't get completed	fix_versions: pattern mismatch ['WES X: Platform E2E', 'WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3359	Story	Closed	Vasiliy Kumaev	Automatically send completed assay qc arrays with no metric failures to historical tramstop	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

LOPS Sprint 25 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3825	Story	Closed	Ron Enson	Update SOP ID and Description for Histopathology	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3807	Story	Closed	Vasiliy Kumaev	Display sample barcodes for PD runs in Plates & Gels	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3691	Story	Closed	Lev Evstratov	Updated security department when storing samples	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3684	Story	Closed	Lev Evstratov	Histopathology Lab Incidents - UI updates	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3675	Story	Closed	Vasiliy Kumaev	Incidents - Remove Approval Step for Incidents Created Without an Approval Workflow	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3596	Story	Closed	Valeria Vargas	Primer Design - Add sample information to the Primer Design Assay QC UI and Reports	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3511	Story	Verified	Lev Evstratov	SPIKE - Auto-approve Datasets on reagent qualification when all results are passing.	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-3450	Story	Closed	Alex Pakhunov	Add Assay QC package for DataMesh Package	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-3376	Story	Verified	Ize Imai	Handle Short TNP Scenario where action.code = 'CANCEL' (and upversion to v1.18)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3342	Story	Verified	Ize Imai	Implement changes needed to redesign/refactor worklist generators/runlog parsers for sgNIPT	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-3304	Story	Closed	Vladimir Piyanov	Handling assay request processing failures	fix_versions: pattern mismatch ['ARM Preview / ACCN 2.0', 'LOPS M1 (1.0.1.0)']
LOPS-3226	Story	Closed	Vladimir Piyanov	Retrieve sample information from SamRep REST endpoint when Assay Request is consumed and persist sample info to LOPS DB	fix_versions: pattern mismatch ['ARM Preview / ACCN 2.0', 'LOPS M1 (1.0.1.0)']
LOPS-3224	Story	Closed	Vladimir Piyanov	Persist request info from SamRep	fix_versions: pattern mismatch ['LOPS M1 (1.0.1.0)']
LOPS-2637	Story	Verified	Vasiliy Kumaev	Reagent Validation API	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2531	Story	Verified	Alex Pakhunov	Data Mesh - Implement Assay Information Package. Test only	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-2479	Story	Closed	Mikhail Makarin	The system shall have the ability to list all derivative samples associated to the Parent Barcode	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1384	Story	Closed	Alex Pakhunov	Data Mesh - Create a new service infrastructure and Sample Information Package	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1383	Story	Closed	Leonid Garin	Data Mesh - Equipment Package	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

LOPS Sprint 23 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3471	Story	Closed	Kevin Detweiler	Remove the testing department on the query on the Choose Instrument window for datasets	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-3423	Story	Closed	Valeria Vargas	Update Well-Level Worklist Generators to include leading zero for single digit wells	fix_versions: pattern mismatch ['WES X: Platform E2E']
LOPS-3364	Story	Closed	Mikhail Makarin	Give users access to buttons/pages that support change of custody for samples	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-3354	Story	Closed	Monish Grover	Support barcode scanning for equipment and reagents in the corresponding lookup windows	fix_versions: pattern mismatch ['WES X: Platform E2E', 'WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3337	Story	Closed	Lev Evstratov	Creation of new fields/columns on the instrument needed for bulk equipment update.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']
LOPS-3221	Story	Closed	Vladimir Piyanov	Decrypt sample and kit barcodes received from SamRep	fix_versions: pattern mismatch ['LOPS M1 (1.0.1.0)']
LOPS-2896	Story	Closed	Lev Evstratov	Bulk Equipment Update	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']
LOPS-2308	Story	Closed	Ize Imai	Handle short TNP Scenario: Assay Request Message containing action.code = 'ERROR' and samples.action.code = 'ARCHIVE'	fix_versions: pattern mismatch ['LOPS M2 (1.0.2.0)']
LOPS-1481	Story	Closed	Mai Ton-Nu	Updates to instrument page queries	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']
LOPS-1306	Story	Closed	Vasiliy Kumaev	Create import process for creation of Reagent lot trackitems	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']

LOPS Sprint 22 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3263	Story	Closed	Vasiliy Kumaev	Support manual recovery for when assays are created but testing doesn't get assigned to source samples	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-3235	Story	Closed	Ize Imai	Update ARM message processing to set correct site and security department on samples	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-2985	Story	Closed	Valeria Vargas	Fix QC Batch Item Type for Controls in Derivative QC Batches	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']
LOPS-1982	Story	Closed	Kersha Eddy	Reagent CLS Job type	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22']
LOPS-1486	Story	Closed	Kersha Eddy	Add "Date placed in service" column to Instrument SDC	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1303	Story	Closed	Brandon Culver	Create import process for creating reagent lot container trackitems	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-22', 'LOPS Launch 1.0.0.0']

LOPS Sprint 21 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3122	Story	Closed	Lev Evstratov	Update policy controlling Reagent Container barcodes to remove kit	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-2964	Story	Closed	Krishna Tanuku	Consumable Class is mandatory when creating a new Consumable Type	fix_versions: pattern mismatch ['WES X: Platform E2E', 'WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-2936	Story	Closed	Leonid Garin	Rework Blood from Extraction: Update Validations and Fix Error Message	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-2881	Story	Closed	Vasiliy Kumaev	OOTB rejectPlate() Rejects the first dataset, instead of the last	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-2841	Story	Closed	Krishna Tanuku	Equipment ID generation	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-2645	Story	Closed	Valeria Vargas	Assay Maint Page Updates	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-2381	Story	Closed	Brandon Culver	Display Reagent Container barcodes	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21']
LOPS-2374	Story	Closed	Leonid Garin	The system shall have the departmental security defined on the required SDCs.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-1490	Story	Closed	Mai Ton-Nu	Record equipment information	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-1489	Story	Closed	Mai Ton-Nu	Create a method for identifying and filtering by work order due date range and overdue	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-1415	Story	Closed	Mai Ton-Nu	RND EQP - Equipment categorization for filtering / searching	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']
LOPS-999	Story	Closed	Alex Pakhunov	Implement the ability to sync incident id from LOPS to LV1.0	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-998	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot data from LOPS to LV1.0 and LV1.0 to LOPS	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-728	Story	Closed	Alex Pakhunov	Reagent lot Container Trackitem Sync	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-DEV-20', 'LOPS Launch 1.0.0.0']
LOPS-722	Story	Closed	Alex Pakhunov	Implement the ability to sync Reagent Lot data	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-DEV-20', 'LOPS Launch 1.0.0.0']
LOPS-608	Story	Closed	Monish Grover	LOPS Reagent Qualification Report	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-21', 'LOPS Launch 1.0.0.0']

LOPS Sprint 20 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2978	Story	Closed	Lev Evstratov	The error message when apply "Fail Assay" for assay with InProgress status in Sample Analysis Review page	fix_versions: empty
LOPS-2457	Story	Closed	Ize Imai	Refactor "Use Retain Sample" functionality	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS Launch 1.0.0.0']
LOPS-1978	Story	Closed	Kevin Detweiler	Add Reagent Job types and update existing job types	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']
LOPS-1976	Story	Closed	Jonathan Quinn	Create LabOps Operator and LabOps Manager	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1667	Story	Closed	Laura Dietrick	Create Extraction Manager and Extraction Operator job type	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1000	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot trackitem data from LOPS to LV1.0	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-20', 'LOPS Launch 1.0.0.0']

LOPS Sprint 19 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2895	Story	Closed	Leonid Garin	Updates to early assay termination logic	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2817	Story	Verified	Vasiliy Kumaev	Fix issue with re-uploading quant rundata	fix_versions: pattern mismatch ['LOPS-MVP-19']
LOPS-2759	Story	Closed	Leonid Garin	Support bulk restart from extractions for WES in Assay QC	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2758	Story	Closed	Vasiliy Kumaev	Support Tissue Rework from Histopathology in Assay QC	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2757	Story	Closed	Vasiliy Kumaev	Array Genealogy Page updates	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2674	Story	Closed	Leonid Garin	Update Sequencing Run Complete Message to Complete Sequencing Test Method on Samples	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2583	Story	Closed	Vasiliy Kumaev	Update "Accept Partial" action during Array QC Review to set array status to "Reviewed"	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2349	Story	Closed	Kevin Detweiler	Validate equipment location	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-2028	Story	Closed	Lev Evstratov	Display the product config ID and name in Assay QC UI for the control sample types	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1482	Story	Closed	Monish Grover	View next/last calibration and PM dates for instruments	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-1006	Story	Closed	Ize Imai	Refactor the SELECT, RETAIN, and ARCHIVE sample tracking	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS Launch 1.0.0.0']
LOPS-997	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent type data from LOPS to LV1.0	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']
LOPS-715	Story	Closed	Ilya Savinov	Reagent Type Sync from LOPS to LV1.0 (LOPS ticket)	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-19', 'LOPS Launch 1.0.0.0']

LOPS Sprint 18 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2549	Story	Verified	Lev Evstratov	Update Primer lookups in Sequence Manifest	fix_versions: pattern mismatch ['LOPS-MVP-18']
LOPS-2548	Story	Closed	Leonid Garin	Update Sequencing Run Complete processing logic to query for the sequencer and flow cell id from RunDetails SDI Group	fix_versions: pattern mismatch ['LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2477	Story	Closed	Lev Evstratov	Support "Pipeline Analysis Only" Assay Templates that may not have Test Methods added	fix_versions: pattern mismatch ['LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2392	Story	Closed	Andrei Smolkin	Add Assay status, Assay Template type, and Disposition	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-2387	Story	Closed	Leonid Garin	The system shall have the ability to create assay instance records for control samples that are created off of QC Batch	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2327	Story	Closed	Vasilii Sevriugin	Validate selection of Reagent lot as Required on a QC Batch Control	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	fix_versions: empty
LOPS-2118	Story	Closed	Valeria Vargas	Update Pool sample page to default Sample template and Natera barcode as Mandatory	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-2046	Story	Closed	Vasiliy Kumaev	Support "Blind Scan" process for racks	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1926	Story	Closed	Brandon Culver	Add data items and queries/filters to Trackitem tramstop	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']
LOPS-1488	Story	Closed	Mai Ton-Nu	Instrument work order group by Testing Department	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-18', 'LOPS Launch 1.0.0.0']

LOPS Sprint 17 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2393	Story	Closed	Lev Evstratov	TextCustomSpecRule only supports Sample SDC	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2221	Story	Closed	Valeria Vargas	Update the sample list and manage test list page to filter samples by user's testing lab	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2208	Story	Closed	Kevin Detweiler	The system shall have the departmental security defined on the required SDCs.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2190	Story	Closed	Vasiliy Kumaev	Validations and logic on the Accept and Accept Partial buttons to ensure users perform the correct actions during Quant	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2151	Story	Closed	Kevin Detweiler	Update all departments to have external flag set to N	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2031	Story	Closed	Leonid Garin	Unable to filter CrossSDICalc in Arrays to only pull data from current Array Method Instance	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2018	Story	Closed	Kevin Detweiler	The system shall have Jobtypes and roles configured	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-2013	Story	Closed	Lev Evstratov	QC Batch Updates	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1974	Story	Closed	Lev Evstratov	The system shall update the sample look up page to remove sample templates from the list of samples	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1586	Story	Closed	Lev Evstratov	Block assay dispositioning when there are active Holds associated	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1484	Story	Closed	Mai Ton-Nu	Instrument queries	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-1483	Story	Closed	Jonathan Quinn	Create a method to record qualification status of instrument	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']
LOPS-960	Story	Closed	Vasilii Sevriugin	E-Signature Capture During Dataset Approval/Rejection	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS-MVP-17', 'LOPS Launch 1.0.0.0']

LOPS Sprint 16 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2191	Story	Closed	Vasiliy Kumaev	Create policy that sets wells to "Rejected" when results fail during Array QC Review	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-2179	Story	Closed	Vasiliy Kumaev	Ability to associate the respective reagent container barcode to a control when we select the container for a control in	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-2153	Story	Closed	Lev Evstratov	Update Assay QC UI to show counts of number of assays pending disposition	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-2019	Story	Closed	Vasiliy Kumaev	Refactor the trigger for Assay "Completed" status	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-2012	Story	Closed	Lev Evstratov	Automatically add assay instance records to Incidents	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1748	Story	Closed	Kevin Detweiler	The system shall have storage units types for Histopathology	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

LOPS Sprint 14 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1932	Story	Closed	Leonid Garin	New Assay is not displayed in Assay element on Sample maint/view when there are no workitems defined on the assay templa	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1889	Story	Closed	Leonid Garin	Remove Default Assay Template Logic for Filler Samples	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1874	Story	Closed	Vasiliy Kumaev	Assay Dispositioning Updates	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1848	Story	Closed	Leonid Garin	Update Filler Sample Exclusion	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1746	Story	Closed	Meghana Joshi	Tissue Extraction 4 - Associate Sample Group with Control to Rack	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1708	Story	Closed	Meghana Joshi	Blood Extraction - Rundata: Verify Blood Samples Scheduled for Blood Extraction	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1597	Story	Closed	Leonid Garin	The system shall have the ability to scan sample natera barcode on the sample file page	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1273	Story	Closed	Mikhail Terpugov	Library QC Review - Create Library QC Review page with Approve Action for Library Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1272	Story	Closed	Klead Fusha	Library QC - Create Blood Quant Plate-Level QC Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1271	Story	Closed	Klead Fusha	Library QC - Create Blood Sample / Control-Level Specification Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1269	Story	Closed	Klead Fusha	Library Quant - Create Concentration calculation Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1268	Story	Closed	Mikhail Terpugov	Library Quant - Create Results RunData Processor and master data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1267	Story	Closed	Mikhail Terpugov	Library Quant - Create Plating RunData Processor and master data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1249	Story	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - Create Tube-to-Rack Transfer Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1129	Story	Closed	Mikhail Terpugov	Normalization - Record rundata headers in SDI Group	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-929	Story	Closed	Vasilii Sevriugin	The system shall provide a manual way to re-trigger a new Pipeline Launch Request for a sequencing run.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-784	Story	Closed	Brandon Culver	In-line QC - Use of unapproved lots	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-620	Story	Closed	Lev Evstratov	Reagent Container barcodes	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']

LOPS Sprint 15 (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1888	Story	Closed	Lev Evstratov	Assay QC UI Updates	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1779	Story	Closed	Leonid Garin	Provide a method for performing text validations within a parameter list	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1596	Story	Closed	Brandon Culver	The system shall display required tram lines and tram stops on the LabAdmin site map	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1589	Story	Closed	Chris Lott	The system shall display required tram lines and tram stops on the LIMS site map	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1468	Story	Closed	Lev Evstratov	Allow Users to Refresh/Retrigger Assay Auto-Disposition Logic When Batches and Runs are Approved.	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1406	Story	Closed	Vasiliy Kumaev	Update Assay QC UI and Processing to support metrics with errors instead of expected values	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-1379	Story	Closed	Chris Lott	The system shall have specific information populate on the result data entry page	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-1025	Story	Closed	—	Gitlab Work	fix_versions: pattern mismatch ['WES X: Platform Launch']
LOPS-959	Story	Closed	Vasiliy Kumaev	Pipeline Run Error Handling	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-930	Story	Closed	Lev Evstratov	The system shall provide users with the the ability to log Incidents and indicate if a Hold on assay dispositioning is r	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']

LOPS Sprint 13 (30 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1864	Story	Closed	Klead Fusha	Tissue Extraction Workflow: Task-based approach to advance Sample Groups	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1860	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Plate with Control	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1771	Story	Closed	Mikhail Makarin	Library Amplification - Record Rundata Headers	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1770	Story	Closed	Mikhail Makarin	Library Prep - Record Rundata Headers	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1769	Story	Closed	Mikhail Makarin	Extraction Quant - Record 'Plating' Rundata Headers	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1712	Story	Closed	Mikhail Makarin	Blood Extraction - Store Rundata File as Attachment	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1707	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Include Controls	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1685	Story	Closed	Meghana Joshi	Tissue Extraction 7 > Tissue DNA Extraction - Create Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1682	Story	Closed	Mikhail Makarin	The system shall display the associated Parent or Child information on the sample maintenance page.	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1677	Story	Closed	Brandon Culver	Update jasper reports for run, batches, and samples	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1634	Story	Closed	Meghana Joshi	Extraction QC Review - QC Review Page for Extraction QUANT Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1632	Story	Closed	Lev Evstratov	Update Controls page in the Assay QC UI to support reworked controls and multi-use containers	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	fix_versions: pattern mismatch ['Milestone 13']
LOPS-1609	Story	Closed	Leonid Garin	Support Assay instance creation for Filler samples	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1592	Story	Closed	Vasiliy Kumaev	Add remaining buttons and functionality to Primer Design Assay QC UI	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1588	Story	Closed	Chris Lott	Update manage test list page	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1568	Story	Closed	Meghana Joshi	Test Only. Blood extraction Filter sample list page	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1567	Story	Closed	Brad Garrett	Fragmentation - Populate current date/time (Test only)	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1565	Story	Closed	Klead Fusha	Extraction quant - Expanded Calculated Concentration logic	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1514	Story	Closed	Lev Evstratov	Create Assay QC Paramlists for DAQ and WES Analysis and Primer Design	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1507	Story	Closed	Leonid Garin	The system shall provide a way to configure the next Group Test Method to be assigned to the current sample.	fix_versions: pattern mismatch ['Milestone 13', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1469	Story	Closed	Lev Evstratov	Display "Assays Pending Disposition" in the Assay QC UI	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1396	Story	Closed	Vasiliy Kumaev	Assay QC Array Closure	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1391	Story	Closed	Vasiliy Kumaev	Handle lineItemId updates from ARM	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1266	Story	Closed	Mikhail Terpugov	Library Quant - Create Worklist	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1248	Story	Closed	Klead Fusha	Tissue Extraction 3 > Lysis and Decrosslinking - Create Run Details Master Data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1247	Story	Closed	Michael Livingston	Tissue Extraction 2 > Deparaffinization - Select Sample Group, Record Run Details	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1246	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples v2	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1157	Story	Closed	Chris Lott	The system shall have the ability to search for one or more sample barcodes	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1111	Story	Closed	Michael Livingston	WES: Tissue Extraction - Sample Group Page Format	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']

LOPS Sprint 12 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1614	Story	Closed	Mikhail Terpugov	Normalization - Validate Controls (Blood Plate)	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1492	Story	Closed	Michael Livingston	Tissue Extraction 4 - Create Tissue Rack	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1478	Story	Closed	Michael Livingston	Create Rack List Page	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1477	Story	Closed	Lev Evstratov	Update Assay QC UI to support reworked samples and arrays	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1408	Story	Closed	Vasiliy Kumaev	Update Pipe Results Message Schema to v1.1	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1404	Story	Closed	Brandon Culver	Update Assay QC UI to support Pipeline Analysis Only Assays where Pipe Results are only on Run Level	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1254	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Rundata Processor	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1253	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Exclude Controls	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1234	Story	Closed	Mikhail Terpugov	Normalization - Create rundata processor, plates for Blood plates	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1152	Story	Closed	Vasilii Sevriugin	The system shall have the ability to decrypt information from the Accessioning Message	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1137	Story	Closed	Vasiliy Kumaev	The system shall provide a way for users to Disposition assays from the Assay QC UI.	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1126	Story	Closed	Brad Garrett	Extraction QC Review - Create Extraction QC Review Page with Approve Action for Extraction Plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1109	Story	Closed	Brad Garrett	Tissue Extraction 7 > Tissue DNA Extraction - Run Details	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1055	Story	Closed	Leonid Garin	Create a streamlined process for allowing users to rework samples from an array	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1022	Story	Closed	Lev Evstratov	Add DAQ Pipe Job IDs to the Primer Design Pipe Launch Request	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-958	Story	Closed	Vasilii Sevriugin	Assay QC Review Queues	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']

LOPS Sprint 11 (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1601	Story	Closed	Brad Garrett	Update to allow results to be promoted a 2nd time	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1448	Story	Closed	Brad Garrett	Run Details Manual Data Entry	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1421	Story	Closed	Meghana Joshi	Blood Extraction - Create child sample via rundata processing	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1395	Story	Closed	Vasiliy Kumaev	Record Pipe Job ID and and status from Pipe Results Message on the Array Method	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1378	Story	Closed	Brad Garrett	Blood Extraction - sdi group for capturing rundetails	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1357	Story	Closed	Chris Lott	The system shall display associated assay instance records on the sample maint and view pages.	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1245	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples > Select samples	fix_versions: pattern mismatch ['WES X: Implementation E2E']
LOPS-1237	Story	Closed	Brad Garrett	Record Fragmentation Run Details	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1226	Story	Closed	Mikhail Terpugov	Normalization - Create Worklist processor	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1186	Story	Closed	Lev Evstratov	Update Samples List page on the Assay QC UI to include Assay information	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1176	Story	Closed	Brad Garrett	Extraction QC - Create Blood Quant Plate Specification	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1139	Story	Closed	Klead Fusha	The system shall have Histopathology testing in an Assay Template	fix_versions: pattern mismatch ['Milestone 11', 'WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1121	Story	Closed	Brad Garrett	Extraction Quant QC - Create Blood Sample/control Specifications	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1119	Story	Closed	Michael Livingston	Create Concentration Calculation for Extraction Quant	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1110	Story	Closed	Meghana Joshi	Blood Extraction - Build action for qc batch to store rundata headers	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1097	Story	Closed	Chris Lott	The system shall provide users with a manual way to Fail an Assay prior to Assay QC	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1088	Story	Closed	Brandon Culver	Update Assay QC UI to support review of control results	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-956	Story	Closed	Leonid Garin	Workitem Re-Testing in Bulk	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-944	Story	Closed	Vasiliy Kumaev	Automated disposition of Assays during processing of the Pipe Results message	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-760	Story	Closed	Vasiliy Kumaev	When the system parses the sample accessioning messages, the Request and samples will be created along with required dat	fix_versions: pattern mismatch ['Milestone 9', 'Milestone 11', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']

LOPS Sprint 10 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1447	Story	Closed	Brad Garrett	Child pages for run detail implementation of SDI Groups	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1412	Story	Closed	Meghana Joshi	Updates / Build for Blood Extraction Results Review	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1401	Story	Closed	Brad Garrett	Implement SDI Group page for manual data entry of run details	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1264	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1263	Story	Closed	Michael Livingston	Library Amplification - Create Worklist processor	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1261	Story	Closed	Meghana Joshi	Blood Extraction Quant - Create RunData Results Processor	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1243	Story	Closed	Vasilii Sevriugin	When the child sample is created by and a sample template is chosen, specific data shall be copied to the sample from th	fix_versions: pattern mismatch ['Milestone 11', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1239	Story	Closed	Michael Livingston	Library Prep - Create Rundata Processor and master data	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1238	Story	Closed	Michael Livingston	Library Prep - Create worklist processor button	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1155	Story	Closed	Leonid Garin	Update Pipe Launch Request to Use Real Tumor Purity Value	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1095	Story	Closed	Leonid Garin	Update Assay Dispositioned Status Messages to support "XCPT-00001" logic and requirements	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1057	Story	Closed	Vasiliy Kumaev	Auto-approvals for datasets on the run and batch levels	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1033	Story	Closed	Mikhail Terpugov	The system shall have the ability to add a retest and have it associated to the assay instance	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-974	Story	Closed	Leonid Garin	Exclude filler samples and cancelled samples from the pipeline launch request	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-814	Story	Closed	Vasiliy Kumaev	When a child sample is created, testing is assigned from the assay template	fix_versions: pattern mismatch ['Milestone 11', 'Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-737	Story	Closed	Lev Evstratov	Update ARM Message Processing for "WES Analysis and Primer Design Assay"	fix_versions: pattern mismatch ['Milestone 11', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']

LOPS Sprint 09 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1327	Story	Closed	Meghana Joshi	Blood Extraction Quant - Update to plating for Standards	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1324	Story	Closed	Brad Garrett	Blood Extraction - Worklist generation and runlog upload	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1230	Story	Closed	Brad Garrett	Implement QC Batch UI and RunDetails objects	fix_versions: pattern mismatch ['WES X: Implementation E2E']
LOPS-1185	Story	Closed	Chris Lott	Add "Manage Tests" button to the Workitems element on the Assay Instance Maint page	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1168	Story	Closed	Vasilii Sevriugin	Implement a byte array serializer	fix_versions: empty
LOPS-1167	Story	Closed	Lev Evstratov	The system shall display required tram lines and tram stops on the LIMS site map	fix_versions: pattern mismatch ['Milestone 11', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1164	Story	Closed	Leonid Garin	The system shall display required tram lines and tram stops on the Lab Admin site map	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1163	Story	Closed	Lev Evstratov	The system shall have the required Job types configured	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1156	Story	Closed	Leonid Garin	The system shall have the ability to display the associated trackitem information on the sample	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1135	Story	Closed	Vasiliy Kumaev	When an assay is first assigned to a sample and the new assay instance record is generated, the system shall apply appro	fix_versions: pattern mismatch ['Milestone 11', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-1117	Story	Closed	Brad Garrett	Add Extraction Quant Worklist Generator and Quant Plating RunData Upload buttons to the ArrayList page	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-1087	Story	Closed	Brandon Culver	Update Pipe Results Message Processing to Support Controls	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-908	Story	Closed	Vasiliy Kumaev	Automated Assay Cancellation	fix_versions: pattern mismatch ['WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-907	Story	Closed	Meghana Joshi	Extraction Quant - Create the workflow task and master data for import of the rundata	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-869	Story	Closed	Lev Evstratov	Update Manual Assay Cancellation Functionality to Set Assay Disposition to "Cancelled"	fix_versions: pattern mismatch ['Milestone 12', 'WES X: Platform E2E', 'LOPS Launch 1.0.0.0']
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	fix_versions: empty
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	fix_versions: empty

LOPS Sprint 08 (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1183	Story	Closed	Michael Livingston	Update array methods with new parameter - RunDataEntered	fix_versions: pattern mismatch ['WES X: Implementation E2E']
LOPS-1123	Story	Closed	Vasiliy Kumaev	The system shall provide the ability to promote results from an array method to sample datasets even when there are mul	fix_versions: pattern mismatch ['Milestone 11', 'LOPS Launch 1.0.0.0']
LOPS-1084	Story	Closed	Lev Evstratov	Add way to configure "Point of No Return" on the assay template	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-1058	Story	Closed	Brandon Culver	Support QC Metrics where the metric name has >40 characters	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-1032	Story	Closed	Chris Lott	The system shall display specific information on the Manage Test list page	fix_versions: pattern mismatch ['Milestone 11', 'LOPS Launch 1.0.0.0']
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	fix_versions: empty
LOPS-906	Story	Closed	Meghana Joshi	Create quantification workflow task for download of samples eligible for quantification to a file	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-904	Story	Closed	Meghana Joshi	Create workflow task for upload of WES blood extraction rundata log and transfer to array	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-816	Story	Closed	Vasilii Sevriugin	When the sample is created as a child sample, the system shall define the testing lab and site from the parent sample	fix_versions: pattern mismatch ['Milestone 11', 'LOPS Launch 1.0.0.0']
LOPS-815	Story	Closed	Chris Lott	The system shall have the ability to define the Natera barcode when creating multiple children samples	fix_versions: pattern mismatch ['Milestone 10', 'LOPS Launch 1.0.0.0']
LOPS-809	Story	Closed	Brandon Culver	When a user receives the sample, the system shall define the testing lab and site from the user	fix_versions: pattern mismatch ['Milestone 11', 'LOPS Launch 1.0.0.0']
LOPS-602	Story	Closed	Chris Lott	Update Event Plan to Use Correct Child Sample Plan Code	fix_versions: pattern mismatch ['Milestone 6', 'LOPS Launch 1.0.0.0']

LOPS Sprint 06 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1014	Story	Verified	Vasiliy Kumaev	Implement changes required to ensure the Pipe Launch Request uses the correct Flow Cell ID	fix_versions: pattern mismatch ['Milestone 10']
LOPS-963	Story	Closed	Vasiliy Kumaev	The system shall display associated assay instance records on the sample maint and view pages.	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-951	Story	Verified	Vasiliy Kumaev	Implement changes to support manual data entry for the flow cell ID when setting up the sequencing run	fix_versions: pattern mismatch ['Milestone 10']
LOPS-915	Story	Closed	Brandon Culver	Update the trackitem DB Trigger for UUID	fix_versions: pattern mismatch ['WES X: Platform Launch', 'LOPS Launch 1.0.0.0']
LOPS-914	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	fix_versions: pattern mismatch ['Milestone 10', 'LOPS Launch 1.0.0.0']
LOPS-900	Story	Closed	Brandon Culver	The system shall have the ability to define an Assay	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-888	Story	Closed	Meghana Joshi	Create Test Method "WES Capture PCR Cleanup"	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']

LOPS Sprint 07 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-903	Story	Closed	Meghana Joshi	Create workflow task for download of samples eligible for extraction to a file	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-886	Story	Closed	Michael Livingston	Create array method and transfer method for WES Library Amplification plate	fix_versions: pattern mismatch ['WES X: Implementation E2E', 'LOPS Launch 1.0.0.0']
LOPS-633	Story	Verified	Vasilii Sevriugin	Update ARM Message Processing to support v1.16 of the schema	fix_versions: pattern mismatch ['Milestone 11']

LOPS Sprint 05 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-891	Story	Closed	Michael Livingston	Update array method "WES Sequencing" to include flow cell id and instrument id	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-890	Story	Closed	Michael Livingston	Create transfer method "WES Sequencing Prep Transfer"	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-889	Story	Closed	Michael Livingston	Create transfer method and array method for WES Capture PCR Cleanup plate	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-887	Story	Closed	Michael Livingston	Create array method and transfer method for WES Pre-Capture Pooling Plate	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-885	Story	Verified	Michael Livingston	Create Test Methods for WES PreCapture Pooling	fix_versions: pattern mismatch ['Milestone 5']
LOPS-884	Story	Verified	Michael Livingston	Create Test Methods for WES Library Amplification	fix_versions: pattern mismatch ['Milestone 5']
LOPS-882	Story	Verified	Michael Livingston	Create Array method and array layout for Blood extraction plate	fix_versions: pattern mismatch ['Milestone 10']
LOPS-878	Story	Closed	Michael Livingston	Create Test Methods for Sig WES Downstream	fix_versions: empty
LOPS-872	Story	Closed	Brad Garrett	Update Pipeline Results Message processing to support Pipeline Analysis Only assays and upversion to v0.6	fix_versions: pattern mismatch ['Milestone 10', 'LOPS Launch 1.0.0.0']
LOPS-867	Story	Closed	Vasiliy Kumaev	When the child sample is created and a sample template is chosen, specific data shall be copied to the sample from the s	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-865	Story	Closed	Vasiliy Kumaev	Update Assay Request Message Processing	fix_versions: pattern mismatch ['LOPS Launch 1.0.0.0']
LOPS-857	Story	Verified	Michael Livingston	Create Array Templates and Test Methods for Sig WES Blood Extraction	fix_versions: pattern mismatch ['Milestone 10']
LOPS-831	Story	Closed	Brandon Culver	Controls in the pipe launch request	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-826	Story	Closed	Meghana Joshi	The system shall produce a Sample Event Kafka Message in JSON format that contains the required information for the samp	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-802	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-801	Story	Closed	Brad Garrett	The system shall provide a way for users to view and approve/reject run, batch, and sample level results that are recor	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-790	Story	Closed	Chris Lott	The system shall have the departmental security defined on the required SDCs.	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-733	Story	Closed	Vasiliy Kumaev	When an assay disposition is updated to "Passed", "Failed", or "Cancelled", the system shall produce a message in JSON	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']

LOPS Sprint 04 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-859	Story	Closed	Brandon Culver	The system shall generate unique IDs in UUID format on trackitems for reagents.	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-855	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-838	Story	Verified	Vasiliy Kumaev	The system shall have the ability to generate Exceptions.	fix_versions: pattern mismatch ['Milestone 9']
LOPS-828	Story	Closed	Michael Livingston	The system shall provide a way to define the control sample type for controls reported in the Pipeline Launch Request.	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-821	Story	Verified	Vasiliy Kumaev	The system shall allow users to associate an Exception with an assay instance.	fix_versions: pattern mismatch ['Milestone 9']
LOPS-820	Story	Verified	Vasiliy Kumaev	The system shall provide users with the ability to configure Exception Codes.	fix_versions: pattern mismatch ['Milestone 9']
LOPS-819	Story	Closed	Brandon Culver	The system shall have the ability to record the Disposition of an assay.	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']
LOPS-780	Story	Verified	Vasiliy Kumaev	The system shall have the ability to record the Sample Expiration Date	fix_versions: pattern mismatch ['Milestone 9']

LOPS Sprint 03 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-791	Story	Closed	Chris Lott	The system shall have the ability to display the testing lab on the sample	fix_versions: pattern mismatch ['Milestone 9', 'LOPS Launch 1.0.0.0']

LOPS Sprint 02 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-761	Story	Closed	Vasiliy Kumaev	When the Accessioning Kafka message is processed, the system shall produce a Sample Event Kafka Message in JSON format	fix_versions: pattern mismatch ['Milestone 8', 'LOPS Launch 1.0.0.0']
LOPS-755	Story	Closed	Michael Livingston	Update: The Pipeline Launch Request shall be in JSON format and contain information required by Pipeline.	fix_versions: pattern mismatch ['Milestone 8', 'LOPS Launch 1.0.0.0']
LOPS-743	Story	Closed	Brad Garrett	The system shall have the ability to define the Sample as Archive	fix_versions: pattern mismatch ['Milestone 8', 'LOPS Launch 1.0.0.0']
LOPS-723	Story	Closed	Vasiliy Kumaev	Update: When the system parses the Assay Request Management messages, the required data will be captured in the appropr	fix_versions: pattern mismatch ['Milestone 8', 'LOPS Launch 1.0.0.0']
LOPS-687	Story	Verified	Brandon Culver	Implement the ability to ship some portion of a reagent lot and requalify that group of containers	fix_versions: pattern mismatch ['Milestone 9']
LOPS-686	Story	Verified	Brandon Culver	Record manufacture date on reagent lot	fix_versions: pattern mismatch ['Milestone 9']
LOPS-677	Story	Verified	Michael Livingston	Provide the ability to track plate usage at the well level	fix_versions: pattern mismatch ['Milestone 9']

LOPS Sprint 01 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-645	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	fix_versions: pattern mismatch ['Milestone 7', 'LOPS Launch 1.0.0.0']

No Sprint Assigned (197 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9783	Story	Verified	Bob Ruff	RunLog Processing: Filter Cancelled Samples When Entering Results Directly on Samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.16.0 (M16)']
LOPS-9733	Story	Verified	Michael Livingston	Error While Doing QC Review for sgNIPT cfDNA Pool Quantification Review	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.1']
LOPS-9575	Story	Verified	Bob Ruff	Filter biobanked out of sample list page	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.16.0 (M16)']
LOPS-9522	Story	Verified	Michael Livingston	Update Post Lib Quant 'Accept Partial' Logic	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.14.1 (ePatch)']
LOPS-9521	Story	Verified	Bob Ruff	Verso Worklist Retrieval for biobank Issues	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.15.0 (M15)']
LOPS-9520	Story	Verified	Bob Ruff	When samples are biobanked, previous storage needs to be cleared	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.14.0 (M14)']
LOPS-9481	Story	Verified	Brandon Culver	Cherrypick tfMRD Updates to Plasma Isolation Runlog Processing - Mislabeled Streck Barcode	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-9383	Story	Verified	Brandon Culver	Update Assay QC Control Report Results query to filter results by input barcode plate	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-9186	Story	Verified	Brandon Culver	Update Automated Qubit File Import	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.14.0 (M14)']
LOPS-9176	Story	Verified	Brandon Culver	update Qiasymphony runlog parsing to allow for ingestion of error message as they come from the instrument	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	fix_versions: empty
LOPS-9069	Story	Verified	Michael Livingston	Guided Workflow: gDNA Sequencing Prep	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-9020	Story	Verified	Mehmet Ali Eken	QIP Testing - Create Rack Worklist Node with updated min/max limits	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-9001	Story	Verified	Mehmet Ali Eken	Entry point for QIP	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-9000	Story	Verified	Mehmet Ali Eken	Entry point for Proficiency samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-8966	Story	Verified	Brandon Culver	Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.1 (ePatch)']
LOPS-8953	Story	Verified	Bob Ruff	Update cfDNA Pool Quant QC Review to Approve/Reject Results	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-8906	Story	Verified	Mearat Hou	Implement Reagent Container Usage Endpoint	fix_versions: pattern mismatch ['HiHx E2E 1', 'HiHx Launch']
LOPS-8905	Story	Verified	Mearat Hou	Implement Reagent Containers API Endpoints	fix_versions: pattern mismatch ['HiHx E2E 1', 'HiHx Launch']
LOPS-8904	Story	Verified	Mearat Hou	Implement Reagent Types API Endpoints	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8903	Story	Verified	Mearat Hou	Implement Reagent Lots API Endpoints	fix_versions: pattern mismatch ['HiHx Launch']
LOPS-8901	Story	Verified	Mearat Hou	Add additional fields to LV1.0 datasource connector column.include.list	fix_versions: pattern mismatch ['HiHx E2E 1', 'HiHx Launch']
LOPS-8899	Story	Verified	Bob Ruff	Update to automate Push to source Array	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-8890	Story	Verified	Michael Livingston	Verso runlog auto-uploading	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.14.0 (M14)']
LOPS-8844	Story	Verified	Lev Evstratov	Instrument Integration Runlog processing	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.0 (M7)']
LOPS-8831	Story	Verified	Gianna Bell-Eunice	Update Qiasymphony runlog to allow for ingestion of error message.	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-8818	Story	Verified	Gianna Bell-Eunice	Dedicated menu and tramstops for Iso/Ext	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-8763	Story	Verified	Michael Livingston	Guided Workflow: General Manual Array Steps and for cfDNA PostLig Purification	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-8760	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant) should support 1 half of the plate	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8725	Story	Verified	Michael Livingston	Update reserving spaces for retrieval process for rework samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.1 (ePatch - e2e only)', 'LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8682	Story	Verified	Brandon Culver	Update Cherry Picking Logic	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.1 (ePatch - e2e only)', 'LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8677	Story	Closed	Mehmet Ali Eken	LOPS Support of QIP testing with verso	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.1 (ePatch)']
LOPS-8658	Story	Verified	Bob Ruff	Add the ability to clear custody from trackitems	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.9.0 (M9)']
LOPS-8652	Story	Closed	Bob Ruff	Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	fix_versions: empty
LOPS-8640	Story	Verified	Kathy Dao	New Job Type in sgNIPT for members of the Reagent team to delete lots.	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.0 (M8)']
LOPS-8552	Story	Closed	Kathy Dao	User prep for e2e	fix_versions: pattern mismatch ['sgNIPT FF: LOPS Platform']
LOPS-8551	Story	Verified	Gianna Bell-Eunice	Associate New Primer Plate to Lib Amp Array Method	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-8534	Story	Closed	Gianna Bell-Eunice	Reagent prep for e2e	fix_versions: empty
LOPS-8484	Story	Verified	Michael Livingston	sgNIPT cfDNA PostLib Quant Control Swap	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.0 (M7)']
LOPS-8477	Story	Verified	Mearat Hou	Update Reagent API to send "valid" in instances of in-line valid	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.2 (ePatch)']
LOPS-8437	Story	Verified	Kathy Dao	Restrict access to "Add Test" button	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.1 (ePatch)']
LOPS-8435	Story	Verified	Mehmet Ali Eken	LOPS Support of QIP testing of control samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.1 (ePatch)']
LOPS-8418	Story	Closed	Brandon Culver	Update Runlog Processing for cfDNA Hybridization	fix_versions: empty
LOPS-8390	Story	Verified	Gianna Bell-Eunice	Update Verso logic to allow for StartTime and EndTime rather than TimeStamp	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.2 (ePatch)']
LOPS-8326	Story	Verified	Mehmet Ali Eken	Update Error validating Barcodes after Plasma isolation runlog rerun	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.1 (ePatch)']
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	fix_versions: empty
LOPS-8225	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on trackitem transformer	fix_versions: pattern mismatch ['RS M8 (1.0.8.0)']
LOPS-8224	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on reagentlot transformer	fix_versions: pattern mismatch ['RS M8 (1.0.8.0)']
LOPS-8223	Story	Closed	Mearat Hou	Stop instrument record sync and remove associated transformer from reagent-sync-service	fix_versions: pattern mismatch ['RS M7 (1.0.7.0)']
LOPS-8222	Story	Closed	Mearat Hou	Stop incident record sync and remove associated filter and transformer from reagent-sync-service	fix_versions: pattern mismatch ['RS M7 (1.0.7.0)']
LOPS-8200	Story	Verified	Michael Livingston	Automate Qubit File Import to Eliminate Manual Data Entry	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.9.0 (M9)']
LOPS-8144	Story	Verified	Gianna Bell-Eunice	Update Master Data for MM FFHC-BEAD1 for Alternate Parts	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.0 (M8)']
LOPS-8133	Story	Verified	Michael Livingston	Runlog should fail when primers are not loaded	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8092	Story	Verified	Brandon Culver	Prevent users from putting incorrect gene child sample on a gene specific plate	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.1 (ePatch)']
LOPS-8082	Story	Verified	Mehmet Ali Eken	PacBio Sequencing - Add Run ID to LOPS	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.2 (ePatch)']
LOPS-8066	Story	Verified	Michael Livingston	Add new HC Lib Prep barcode suffix -SGBND for EDTA Plate (Biorad)	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.1 (ePatch - e2e only)', 'LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8065	Story	Verified	Bob Ruff	Leave positions empty on new lib prep plates to accommodate rework	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-8064	Story	Verified	Brandon Culver	Barcode collision check for HC Day 1	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-8062	Story	Verified	Kathy Dao	Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a link to a filt	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.11.0 (M11)']
LOPS-8060	Story	Verified	Bob Ruff	Ability to process biobanking runlog in LOPS	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.14.0 (M14)']
LOPS-8049	Story	Verified	Mai Ton-Nu	Update basic Search, Scan Id Query fields and update list page to view barcode from the Select Trackitem Page (LV_TrackI	fix_versions: pattern mismatch ['sgNIPT ePatch 4 (LOPS-sgNIPT-1.0.3.2)']
LOPS-8024	Story	Verified	Gianna Bell-Eunice	Update Reagent Lot List pages New button/Queries	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.13.0 (M13)']
LOPS-8019	Story	Verified	Michael Livingston	Create a validation on the entry of flowcell id for HC	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.0 (M8)']
LOPS-8012	Story	Verified	Mehmet Ali Eken	Update the processing of sequence complete message	fix_versions: pattern mismatch ['sgNIPT ePatch 4 (LOPS-sgNIPT-1.0.3.2)']
LOPS-8006	Story	Verified	Michael Livingston	gDNA Pre-Extraction worklist included the samples that are placed into the Storage	fix_versions: pattern mismatch ['sgNIPT ePatch 4 (LOPS-sgNIPT-1.0.3.2)']
LOPS-7983	Story	Closed	Mehmet Ali Eken	Create new functionality to accept the upload start sequencing message	fix_versions: empty
LOPS-7975	Story	Verified	Brandon Culver	cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.10.0 (M10)']
LOPS-7917	Story	Verified	Mai Ton-Nu	Update Well Position Formatting (Padded Zeros) for Worklists - HybridCapture	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7915	Story	Verified	Bob Ruff	Implementation of a reagent verification in LOPS to prevent the use of expired tapestation reagents	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.0 (M8)']
LOPS-7911	Story	Verified	Mai Ton-Nu	Side Bar for sgNIPT Iso/Ext	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7906	Story	Verified	Gianna Bell-Eunice	Update Group Test Method sgNIPT gDNA Pool Quant-Dilution Process- Seperate Quant steps from dilution test	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7900	Story	Verified	Mai Ton-Nu	Update WILookup add Test Edit Role to "Select & Add Tests to Assay" button	fix_versions: pattern mismatch ['sgNIPT ePatch 3 (LOPS-sgNIPT-1.0.3.1)']
LOPS-7889	Story	Closed	Brandon Culver	Update sgNIPT gDNA Normalization processor & policy for v1.0 Norm runlog	fix_versions: empty
LOPS-7888	Story	Verified	Brandon Culver	Add Attachment Element to SDIGroup Maint page	fix_versions: pattern mismatch ['sgNIPT ePatch 3 (LOPS-sgNIPT-1.0.3.1)']
LOPS-7886	Story	Closed	Michael Livingston	Update CreateChildSample action to allow pooling of multiple plasma samples in the same assay	fix_versions: empty
LOPS-7832	Story	Verified	Gianna Bell-Eunice	sgNIPT cfDNA Pool Dilution Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transfe	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-7823	Story	Verified	Kristina Feller	sgNIPT cfDNA Worklists Generation Updates for Increase number of plates accepted in cfDNA Pool Quantification array and	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-7822	Story	Verified	Mai Ton-Nu	sgNIPT cfDNA Hybrid (Day 1) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transf	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-7821	Story	Verified	Brandon Culver	sgNIPT cfDNA Capture (Day 2) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and trans	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-7819	Story	Verified	Gianna Bell-Eunice	Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for manual steps	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.9.0 (M9)']
LOPS-7763	Story	Verified	Michael Livingston	Update the validation against creating child samples when unreleasing and releasing	fix_versions: pattern mismatch ['sgNIPT ePatch (LOPS-sgNIPT-1.0.2.1)']
LOPS-7751	Story	Verified	Kathy Dao	Update Equipment types and Counts for TM sgNIPT cfDNA PostLig Pur RunDetails	fix_versions: pattern mismatch ['sgNIPT M3 (LOPS-sgNIPT-1.0.3.0)']
LOPS-7738	Story	Verified	Mehmet Ali Eken	Update Master Mix lot picker to allow "in-line valid" status	fix_versions: pattern mismatch ['sgNIPT ePatch (LOPS-sgNIPT-1.0.2.1)']
LOPS-7720	Story	Closed	Kathy Dao	Update reagent type in HC step	fix_versions: empty
LOPS-7710	Story	Verified	Mai Ton-Nu	Add additional reagents to HC Day 1 Master Mix	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.4.0 (M4)']
LOPS-7709	Story	Verified	Kathy Dao	Update sgNIPT gDNA Pool Dilution RunDetails TM Consumable and Instrument Assignments	fix_versions: pattern mismatch ['sgNIPT ePatch (LOPS-sgNIPT-1.0.1.1)']
LOPS-7696	Story	Verified	Brandon Culver	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ genes.	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.8.0 (M8)']
LOPS-7675	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for Missing NTC Sample	fix_versions: pattern mismatch ['sgNIPT ePatch (LOPS-sgNIPT-1.0.1.1)']
LOPS-7674	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for NTC Sample Presence in Available Lots	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7642	Story	Closed	Deon Hughes	Grant -a access for EPS and some LOPS members	fix_versions: pattern mismatch ['sgNIPT FF: LOPS Platform']
LOPS-7447	Story	Verified	Lev Evstratov	Update array id prefix to FFPla	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-7343	Story	Closed	Gianna Bell-Eunice	Restrict "take custody" to just lab managers/supervisors	fix_versions: pattern mismatch ['sgNIPT FF: LOPS Platform']
LOPS-7328	Story	Verified	Laura Dietrick	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	fix_versions: pattern mismatch ['LOPS 1.2.0.6 (ePatch)']
LOPS-7238	Story	Verified	Lev Evstratov	Update System Transaction Types to only process sgNIPT messages	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-7187	Story	Closed	Brandon Culver	Update Well Position Formatting (Padded Zeros) for Worklists - Iso/Ext	fix_versions: empty
LOPS-7169	Story	Verified	Catalin Parvana	Test only: LOPS fails to process ARM message if Measurement is not present in SamRep	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-7119	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC Reports	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.1 (ePatch)']
LOPS-7118	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7112	Story	Verified	Michael Livingston	Cherrypick shared functionality from tfMRD - Plasma Isolation	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-7102	Story	Verified	Brandon Culver	Refactor PlateToRackNormalizationProcessor to not use deprecated ParamData pojo	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']
LOPS-7092	Story	Verified	Mehmet Ali Eken	cfDNA Rework Scenario Handling (Pool Quant)	fix_versions: pattern mismatch ['sgNIPT M3 (LOPS-sgNIPT-1.0.3.0)']
LOPS-7060	Story	Closed	Lev Evstratov	Separate LOPS Integration - SamRep	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-7058	Story	Verified	Laura Dietrick	Globally unique keys for sgNIPT	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-7053	Story	Closed	—	Separate LOPS Integration - Pipe Sequencing Manifest	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-7050	Story	Closed	—	New Kafka ARM consumer group for sgNIPT Prod	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-7017	Story	Verified	Mai Ton-Nu	Hide non-sgNIPT specific buttons on the QC Batch and Historical QC Batch List pages	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']
LOPS-6987	Story	Verified	Laura Dietrick	Hide non-sgNIPT specific buttons on the Boxes List page	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']
LOPS-6984	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on the Manage Samples List page	fix_versions: pattern mismatch ['sgNIPT M3 (LOPS-sgNIPT-1.0.3.0)']
LOPS-6983	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Historical Plates and Gels page	fix_versions: pattern mismatch ['sgNIPT M3 (LOPS-sgNIPT-1.0.3.0)']
LOPS-6982	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Plates and Gels page	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']
LOPS-6977	Story	Verified	Lev Evstratov	Create the pipeline for instrument integration runlogs	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']
LOPS-6975	Story	Verified	Lev Evstratov	Update sgnipt worklist policies for folder hierarchy	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.7.0 (M7)']
LOPS-6953	Story	Closed	Michael Livingston	Remove control from failed half plate (cfDNA Postlib Quant)	fix_versions: empty
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	fix_versions: pattern mismatch ['sgNIPT FF: LOPS Platform']
LOPS-6921	Story	Verified	Michael Livingston	Allow LOPS to check output tube barcode for cfDNA extraction	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.4.0 (M4)']
LOPS-6885	Story	Closed	Howard LaHurreau	Spike - investigate impact to reagent validation and instrument integration with split prod instances	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.0.0']
LOPS-6804	Story	Verified	Michael Livingston	gDNA Rework Scenario Handling (gDNA Pool Quant Review)	fix_versions: pattern mismatch ['LOPS 1.2.0.2 (Hotfix for sgNIPT shakedown)']
LOPS-6777	Story	Verified	Michael Livingston	Update sgNIPT Plasma Isolation PL	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6769	Story	Verified	Michael Livingston	Add u_containerbarcode field to the container tab on the reagent lot view page	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6764	Story	Verified	Lev Evstratov	Temporary override of using a cloud server for authentication credentials	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'LOPS 1.2.0.1 (ePatch for critical production blockers)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6713	Story	Verified	Brandon Culver	Search by Natera Barcode and Plate barcode on file sample page	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.4.0 (M4)']
LOPS-6644	Story	Verified	Kathy Dao	Create new Group TM for sgNIPT cfDNA Pool Quant Process	fix_versions: pattern mismatch ['sgNIPT M2 (LOPS-sgNIPT-1.0.2.0)']
LOPS-6589	Story	Verified	Michael Livingston	Residual Quant should not require approvals.	fix_versions: pattern mismatch ['LOPS 1.2.0.2 (Hotfix for sgNIPT shakedown)']
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	fix_versions: pattern mismatch ['LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6574	Story	Verified	Ize Imai	QC Review Quant Files need to accept mew character	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6573	Story	Verified	Vasilii Sevriugin	Update worklist generated filename to include seconds	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6568	Story	Verified	Sri Gorantla	Re-implement ticket that was reverted	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6566	Story	Verified	Ize Imai	Update Capture Worklist for partial Plate use case	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6564	Story	Verified	Bob Ruff	SMRT Link issues	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6563	Story	Verified	Brandon Culver	RunLogConfigPolicy node for step with expected plate suffix -LRPOOLQ	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6561	Story	Verified	Lev Evstratov	CFTR Rack Array Layout for positions E01, E02 and E03 must be left blank.	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6523	Story	Verified	Mehmet Ali Eken	Reimplement - Allow sample rework from Assay QC	fix_versions: pattern mismatch ['sgNIPT E2E', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6522	Story	Verified	Michael Livingston	Reimplement - Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	fix_versions: pattern mismatch ['sgNIPT E2E', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6521	Story	Verified	Sri Gorantla	Update gDNA Library Prep Worklist Policy Node names	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6520	Story	Verified	Ize Imai	Allow users to generate HBB Barcoding worklist with more than 1 assay	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6519	Story	Verified	Brandon Culver	Enable system to handle matrix gDNA samples queued for multiple assays	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6509	Story	Closed	Olawale Dada	Test only: (Assay-44 Testing)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6508	Story	Closed	Gianna Bell-Eunice	Test only: (Assay-43 Testing)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6507	Story	Verified	Brandon Culver	Update gDNA LR-PCR Pooling Worklist to include Controls	fix_versions: pattern mismatch ['LOPS 1.2.0.2 (Hotfix for sgNIPT shakedown)']
LOPS-6503	Story	Verified	Ize Imai	Ability to generate worklist containing multiple plates for different gene types	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-6489	Story	Verified	Mehmet Ali Eken	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ plates.	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6485	Story	Closed	Laura Dietrick	Test only: gDNA Retest from extractions (Assay-41)	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6430	Story	Verified	Ray Ward	Update cfDNA barcode primer plates sequences in E2E environment	fix_versions: pattern mismatch ['sgNIPT E2E', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	fix_versions: pattern mismatch ['sgNIPT E2E', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6408	Story	Verified	Gianna Bell-Eunice	New reagent and primer plate for HC	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-6388	Story	Verified	Vasilii Sevriugin	Update HybCap Day 2 Worklist Generation to have condensed positions for partial/half plate	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6386	Story	Verified	Sri Gorantla	Allow Lab Ops Operators/Managers to edit array barcodes	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6382	Story	Verified	Lev Evstratov	Need the ability to cherry pick individual retest samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-6379	Story	Verified	Monish Grover	Master Data for gDNA Pool Quant Plating	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	fix_versions: pattern mismatch ['sgNIPT FF: LOPS Platform']
LOPS-6326	Story	Verified	Ize Imai	Store Pool Concentration value in gDNA Pooling runlog to the resulting pooling array	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-6316	Story	Verified	Sri Gorantla	cfDNA PostLib Quant review plate control calculations	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6311	Story	Closed	Justin Jones	Ensure Extraction Managers are given Extraction Manager Job Type for Launch	fix_versions: empty
LOPS-6228	Story	Verified	Ize Imai	Update sgNIPT Rack to Plate Loader class to find source or aliquot sample for downstream assays	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6210	Story	Verified	Ray Ward	Associate reagents and equipment to SDI Groups for Assay-00044	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6179	Story	Closed	Ron Enson	Addition the "Set" parameter to the Isolation runlogs	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-6172	Story	Verified	Krishna Tanuku	Creation of New cfDNA Aliquots Residual Quant Racking MD and Updates to Assay Template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6167	Story	Verified	Olawale Dada	Creation of New cfDNA Aliquots Library Prep Racking MD and Updates to Assay Template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6161	Story	Verified	Monish Grover	Add barcode scan to LV_TrackItemMultiLookup for easier and more compliant master mix process	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6141	Story	Verified	Leonid Garin	Support Assay Request Message v1.19 (Request Params)	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6122	Story	Verified	Gianna Bell-Eunice	Creation of New gDNA Aliquots LR-PCR Racking MD and Updates to Assay Template	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6075	Story	Verified	Krishna Tanuku	Extraction Managers and Operators need access to the 'Add' button on the QCB list page.	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6067	Story	Verified	Swati Giri	Update ISO/EXT Child Barcode Calculations for 14mL and 15mL Plasma Samples	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-6020	Story	Verified	Kathy Dao	LOPS can validate barcodes for a set of samples proceeding through plasma manual/partial isolation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5997	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate and perform follow up actions as need	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5980	Story	Verified	Ize Imai	Generalize the implementation for Plate to Rack (gDNA Normalization)	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5975	Story	Verified	Vasilii Sevriugin	Missing a Loose Tube Loader that's able to perform by position load from RunLog	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5942	Story	Closed	Laura Dietrick	Test only: cfDNA Retest from Assay QC scenarios	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5941	Story	Closed	Gianna Bell-Eunice	Test only: gDNA Retest from Assay QC scenarios	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5836	Story	Verified	Meghana Joshi	The system shall provide EPS Admins the ability to modify assay dispositions.	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5833	Story	Verified	Sri Gorantla	sgNIPT gDNA Pool Dilution volume calculation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5815	Story	Verified	Michael Livingston	Samples that have not been received in LOPS should not appear in the plasma isolation worklist	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5801	Story	Closed	Kersha Eddy	Update tfMRD Assay Templates	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5785	Story	Verified	Lev Evstratov	Update logic for Overall Result in Assay QC Sample Analysis Review page	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5784	Story	Verified	Krishna Tanuku	Update color coding of metric evaluations (Assay QC reports)	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-5783	Story	Verified	Lev Evstratov	Update pipeline-result processor to allow PASSED_WITH_WARNINGS to auto-disposition as Passed	fix_versions: pattern mismatch ['sgNIPT Go-Live: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5720	Story	Closed	Monish Grover	Create worklists using column format (A01, B01, C01,...) to order samples when sourcewell is present	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5696	Story	Verified	Sri Gorantla	LOPS Support for E2E Residual Quant	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5651	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant)	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.2 (ePatch)']
LOPS-5637	Story	Verified	Gianna Bell-Eunice	Associate reagents and equipment to MD for Assay-00043	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5627	Story	Verified	Mai Ton-Nu	Increase number of plates accepted in cfDNA Pool Quantification array and transfer method	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.6.0 (M6)']
LOPS-5509	Story	Closed	Alex Pakhunov	Trigger methylation assay pipeline via REST API - Continue (dnaInput, pano tracers)	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-5387	Story	Verified	Sri Gorantla	Add u_containerbarcode field to the container tab on the reagent lot maint page	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5321	Story	Verified	Liubomyr Skorokhod	(Test only) gDNA sequencing manifest generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5305	Story	Verified	Ray Ward	The system must be able to support Biobankable workflow via sample disposal status	fix_versions: pattern mismatch ['LOPS 1.2.1.0 (M8)', 'WES/WGS 1.0.0.0 (LOPS-WESWGS-1.0.0.0)']
LOPS-5234	Story	Verified	Lev Evstratov	gDNA LR-PCR Pooling Worklist generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5176	Story	Verified	Alex Pakhunov	gDNA Pool Quant Results Integration - Tapestation Quant file import	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-5084	Story	Verified	Ray Ward	gDNA LR-PCR Spectramax Quant Results Integration - Runlog Parsing	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-4907	Story	Verified	Ize Imai	Allow LOPS to check PLM output tube barcode prior to proceeding with Isolation process	fix_versions: pattern mismatch ['sgNIPT M1 (LOPS-sgNIPT-1.0.1.0)']
LOPS-4410	Story	Closed	Hani Yakan	Worklist Generation for Sample Plating and First Bead Addition	fix_versions: pattern mismatch ['tfMRD E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)', 'LOPS 1.0.0.0 (tfMRD Launch)']
LOPS-4188	Story	Verified	Michael Livingston	Support re-use of a control from the same plate	fix_versions: pattern mismatch ['LOPS 1.2.0.2 (Hotfix for sgNIPT shakedown)']
LOPS-2734	Story	Verified	Jonathan Quinn	Support actions at cfDNA Extraction results review - cfDNA Manual Recovery	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2627	Story	Verified	Mehmet Ali Eken	LOPS Support of Proficiency samples	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.12.0 (M12)']
LOPS-2607	Story	Verified	Klead Fusha	SMRT Link - Run design template file generation	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Platform', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-2485	Story	Verified	Olawale Dada	Test only: gDNA downstream assay rework points	fix_versions: pattern mismatch ['sgNIPT E2E: LOPS Implementation', 'LOPS 1.2.0.0 (sgNIPT Launch)']
LOPS-1652	Story	Verified	Lev Evstratov	Notify SamRep that samples were disposed/biobanked	fix_versions: pattern mismatch ['LOPS-sgNIPT-1.0.5.0 (M5)']

Missing or Wrong Team

CRITICAL 16.9% pass rate (4026 violations / 4847 applicable)

Tickets should have the correct team value.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10083	Task	Closed	Klead Fusha	Update "tfMRD Library Amplification Quant" v2 array method volume	team: null
LOPS-10081	Task	Closed	Klead Fusha	[new scope] Spike - Identify all changes needed	team: null

LOPS-tfMRD-57-20251202 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9337	Defect	Closed	Klead Fusha	Allow users to send pipe manifest with Cancelled assays	team: null
LOPS-8994	Defect	Closed	Jonathan Quinn	Search on Iso/Ext tramstop pages returns entire QC Batch list instead of filtered results	team: null
LOPS-8642	Tweak	Closed	Ron Enson	New Job Type in tfMRD for Reagent team to delete lots.	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)

LOPS-tfMRD-55-20251103 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8916	Defect	Closed	Ron Enson	Pool Quant tramstop results does not show requant plates.	team: null

LOPS-tfMRD-53-20251006 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8805	Task	Closed	—	Update mv_tfmrd_array_results to include array method instance	team: null

LOPS-tfMRD-52-20250922 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8504	Defect	Closed	Hani Yakan	Transaction reprocess broken	team: null

LOPS-tfMRD-49-20250811 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7981	Task	Closed	—	tfMRD - Manage tickets and release(s) for spring 49	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7856	Task	Closed	Hani Yakan	tfMRD Materialized Views - Review and adjust Entity Diagrams	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS-tfMRD-48-20250728 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7833	Defect	Closed	—	tfMRD UI improvements - Fix crash in site menu	team: null
LOPS-7831	Task	Closed	Hani Yakan	tfMRD - Manage tickets for sprint 48	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7534	Defect	Closed	Vasiliy Kumaev	Failed to Release Promoted Array Results at Norm	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-7463	Defect	Closed	Mikhail Terpugov	Update isolation equipment Issue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-7045	Defect	Closed	Klead Fusha	System should validate duplicate -tfSEQ barcodes during Pool Dilution and allow the user to modify them before proceedin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS Sprint 20250714 (47) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9620	Story	Closed	Monish Grover	GHPv2 - Extraction: Blood Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7684	Task	Closed	Bob Ruff	Update disposition for to assays in shakedown	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7563	Task	Closed	Ize Imai	WESWGS - Add Secrets k8s Resource to Web Chart	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7556	Task	Closed	Dennis Lin	Re-review of the other files involved in the 5/14/25 WES/WGS merge	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7546	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.0.1	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7542	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.1	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7541	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.1	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7530	Story	Closed	Monish Grover	Merger of LOPS-6732 to the WES/WGS 1.0.1.0 release	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7503	Story	Closed	Monish Grover	Extraction: WGS Extraction Samples Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7484	Story	Closed	—	Histology: WES Incidents Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7480	Story	Closed	—	Histology: WGS Dissection Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7478	Story	Closed	—	Histology: WES Pathology Review Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7476	Story	Closed	—	Histology: WGS H&E Staining Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7474	Story	Closed	—	Histology: WGS Embedding Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7403	Tweak	Closed	Ray Ward	Propagation of sgNIPT LOPS 1.2.0.4 production ePatch to WES/WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7306	Task	Closed	Ray Ward	WES/WGS 1.0.0.0 - Preprod environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7170	Defect	Verified	Leonid Garin	GHP: Extraction Quant: Known Concentration values are not populated for Quant Plate Standards after Quant File Re-Upload	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6732	Story	Verified	Monish Grover	Active/Historical Array List Pages: Support Actions: Store, Dispose, UnStore, UnDispose	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6646	Task	Closed	Kevin Detweiler	Investigation of the inadvertent re-processing of 42322434.1-2-FXB	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6145	Story	Verified	Dennis Lin	WES/GHP: Blood Extraction: Support 'Blood Extraction' Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-3300	Story	Verified	Monish Grover	WES/WGS: Tissue Extraction > Auto-Archive QC Batches based on Create Date	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS-tfMRD-47-20250713 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7635	Task	Closed	Isaac Vargas	Merge Develop into LOPS-tfMRD-1.0.1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7540	Task	Closed	Hani Yakan	Create, plan and maintain sprint LOPS-tfMRD-47-20250714	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7402	Defect	Closed	Mikhail Terpugov	tfMRD Create cfDNA Sample param list use prohibited value.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-7358	Task	Closed	Ron Enson	Create specifications for each of the tram stops in Library Amplification	team: null
LOPS-6684	Story	Closed	Brad Garrett	Allow users to enter in an override for 'Master Pool Quant' during Sequencing Pool Dilution	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6538	Story	Closed	Hani Yakan	NOREAD in the isolation runlog files should be ignored	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS Sprint 20250630 (46) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7409	Task	Closed	—	WGS automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7408	Task	Closed	—	WES automated regression - WES/WGS 1.0.0.0 (formerly LOPS 1.2.1.0 (M8))	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7378	Task	Closed	Ray Ward	WES/WGS 1.0.0.0 - RC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7377	Task	Closed	—	WES/WGS 1.0.0.0 - PSPC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7339	Story	Verified	Ray Ward	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7285	Story	Closed	Ray Ward	Disabling the recording of event logs for the AddTrackItem event plan - code fix	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7284	Task	Closed	Ray Ward	Disabling the recording of event logs for the AddTrackItem event plan - production update	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7280	Defect	Closed	Swati Giri	Capture QC Review. Accept All action - error: Failed to process action 'ReleaseDataltem'.	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7252	Defect	Closed	Ray Ward	Assay Request (ITT000002) Transactions Causing Errors - production update	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7236	Story	Verified	Swati Giri	Update accessioning filtering - LOPS WES/WGS code fix	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7235	Story	Closed	Swati Giri	Update accessioning filtering - LOPS WES/WGS production instance	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7234	Story	Verified	Ray Ward	Library QC performance improvements - code fix	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7228	Defect	Closed	Ray Ward	Change Mode for ReworkCandidate on QCReviewDataset to resolve poor query performance (production fix)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7108	Task	Closed	Ariel Jirau	Add Kubernetes requests and limits for ephemeral storage to protect from evictions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7088	Task	Closed	Ray Ward	Investigation of increasing long run times for "Accept Partial" for QC review steps	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS Sprint 20250616 (45) (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8046	Defect	Closed	Jonathan Quinn	Pool capture day 1 and 2 runlog processing is throwing a benign error on the Latitude Menu	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7295	Task	Closed	Isaac Vargas	Add Logistics Users	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7283	Task	Closed	Swati Giri	WES/WGS filtering updates - Day-Before environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7282	Task	Closed	Swati Giri	WES/WGS filtering updates - PSPC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7281	Task	Closed	Swati Giri	WES/WGS filtering updates - RC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7237	Task	Closed	Ize Imai	Identification of the removable sgNIPT-specific tickets in the LOPS 1.2.1.0 (M8) release	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7210	Defect	Closed	—	Error Executing SQL for LHRTransfer When Transferring Two 'Library Amplification' Plates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7200	Task	Closed	Ize Imai	Creation of WES/WGS-specific branches in the LOPS gitlab repo	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7198	Task	Closed	Klead Fusha	Add e-sig and confirmation for Rework button, for Pool Retest	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-7190	Defect	Closed	Klead Fusha	tfMRD: Library Amplification Quant Review plate with 22 passed samples fails QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7185	Defect	Closed	Dennis Lin	Assay QC for SEQ plate with failed Sample-level post-sequencing QC and failed Run-level post-sequencing QC display empty	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7176	Task	Closed	Swati Giri	Investigation of Kafka message filtering, to limit the accessioning to just WES/WGS assays/samples.	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7113	Task	Closed	Kersha Eddy	Update Size Selection Quantification page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7104	Task	Closed	Isaac Vargas	Update column name from "Number of Items" to "Items in Package"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7098	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7097	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Serhii	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7096	Sub-task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8): Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7095	Task	Closed	—	Manual WES/WGS regression testing - LOPS 1.2.1.0 (M8)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7094	Task	Closed	—	WGS automated regression - LOPS 1.2.1.0 (M8)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7093	Task	Closed	—	WES automated regression - LOPS 1.2.1.0 (M8)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7065	Defect	Verified	Ray Ward	pipelaunchid column set to "Do Not Retrieve" (code fix)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7036	Task	Closed	Laura Dietrick	CLONE - MTT Fetal Focus (sgNIPT) shakedown/E2E support	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7012	Defect	Closed	Kersha Eddy	tfMRD: Incorrect Rundetails are created during tfSHORT plate creation in Advance Array Workflow task	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6990	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - Additional LOPS data mining	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6988	Task	Closed	Kersha Eddy	Create Requant section in tfMRD User Guide	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6986	Task	Closed	Kersha Eddy	Create Site to Site Shipping section in tfMRD User Guide	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6979	Task	Closed	Klead Fusha	Investigate and Address Performance Issues During Runlog File Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6960	Task	Closed	Hani Yakan	Add TODOList, ActionLog, and NatMessage to Data Purging Policy	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6952	Task	Closed	Mai Ton-Nu	MTT Fetal Focus (sgNIPT) shakedown/E2E support	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6899	Story	Closed	Dennis Lin	New Action Button - Setting of the rework reservation flag	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6898	Story	Closed	Dennis Lin	New Page - Historical Normalization Re-Run Samples for the Extraction group	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6796	Story	Closed	Dennis Lin	New Page - Normalization Re-Run Samples for the Extraction group	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6781	Task	Closed	Leonid Garin	Histo Guided Workflow Experiment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6449	Task	Closed	Mikhail Terpugov	Confirm that Samples from S2S Shipping Get Correct Testing Lab and Security Department	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6446	Story	Closed	Mikhail Terpugov	Complete Parent Blood Sample from S2S Shipping	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5547	Story	Closed	—	Rework Actions for Sequencing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS Sprint 20250602 (44) (28 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7064	Defect	Closed	Ray Ward	pipelaunchid column set to "Do Not Retrieve" (production fix)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7034	Task	Closed	Klead Fusha	Sample Pooling Selection - Rework From Hybridization - Improvements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6973	Defect	Verified	Ray Ward	WGS Tissue WF: The -GQPCR and -GTAPE plates don't receive the "Reviewed" statuses after the -GLP2 plate's "QC review ->	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6966	Task	Closed	Jonathan Quinn	Create Isolation/Extraction equipment for tfMRD in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6961	Task	Closed	Ron Enson	tfMRD User Guide development	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6958	Task	Closed	Isaac Vargas	Merge branch LOPS-1.2.0.2 to Develop branch and handle conflicts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6957	Task	Closed	Klead Fusha	Disable the OOTB stats logging in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6954	Task	Closed	Klead Fusha	IT failing for TfmrdSizeSelectionBead1WorklistGenerationIT.processResults_validate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6937	Defect	Verified	Kevin Detweiler	In Assay QC, after performing "Approve Selected" action, the "Trigger Assay Auto-Disposition" button does not display	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6933	Defect	Closed	Klead Fusha	Run Details for LibAmp Quant Results are missing Run Detail Type and Run Detail Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6928	Task	Closed	Ray Ward	Library Quant QC (-GQPCR and -GTAPE) plates not moving to "Reviewed" as expected (after -GLP2 QC Review)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6913	Task	Closed	Isaac Vargas	Follow up on Environment consistency checker issues	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6897	Task	Closed	Kersha Eddy	Update tfMRD User Guide to produce final draft	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6815	Task	Closed	Swati Giri	Kafka message filtering, to limit the accessioning to just WES/WGS assays/samples.	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6739	Task	Opened	—	Prep e2e environment for data for user led UAT	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6704	Defect	Verified	Monish Grover	Many errors in the ToDoList due to Status messages for WGS Filler samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6640	Task	Closed	—	Spike - Assess if the check for Sequencer serialnum and side should be removed from the logic in processing the sequenci	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6479	Task	Closed	Dennis Lin	Performance profiling of the WES & WGS local QA automation regression test suites	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6279	Story	Verified	Kevin Detweiler	WES: Standardize Sequencing Prep Task: Update 'Input/Output Plate Type'	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6278	Story	Verified	Kevin Detweiler	WES/GHP: Standardize Tissue DNA Extraction Task: Update 'Input/Output Plate Type'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6242	Story	Verified	Dennis Lin	WES: Sequencing: Support 'Sequencing' Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5819	Tweak	Closed	Ron Enson	Update Array Transfer Method for duplicate reads for Post-Pooling Quantification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5702	Story	Closed	—	cfDNA PostLib Quant Plating (Hamilton Vantage)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5578	Story	Verified	Dennis Lin	WES/GHP: Fragmentation: Support 'Fragmentation' Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5418	Story	Verified	Kevin Detweiler	Histo: Tissue Sample Return	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5086	Story	Ready for Development	Swati Giri	Map Exception Codes to WES Assay Templates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-2748	Defect	Closed	Kevin Detweiler	Wes On X: Tissue DNA Extraction - Users can proceed with invalid Tissue DNA Plate Barcode	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS Sprint 20250519 (43) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6912	Task	Closed	Matt Smith	Fix Issues With Python Script to Check Environment Deployment Consistency	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6857	Task	Closed	—	Add Dennis Lin and Ray Ward to the set of Java & Javascript code approvers	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6853	Story	Verified	Swati Giri	Inclusion of LOPS-6703 in the LOPS 1.2.0.2 hotfix	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6843	Task	Closed	Monish Grover	LOPS 1.2.0.2 - Assessment of sgNIPT changes on shared WES/WGS code	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6842	Task	Closed	—	LOPS 1.2.0.2 - Manual WES / WGS regression testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6841	Task	Closed	—	LOPS 1.2.0.2 - WES/WGS automated regression	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6670	Defect	Verified	Ray Ward	Extraction/Library QC Review: Page Loading Timeout for 'Accept Partial' Action	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6641	Story	Verified	Ray Ward	WGS: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS Sprint 20250505 (42) (30 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6863	Defect	Closed	Klead Fusha	Manual Data Entry doesn't work after Lib Amp Quant QC Review - "Reject" button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6839	Task	Closed	Klead Fusha	Promote Array Results OOTB should not attempt to push empty data items	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6810	Task	Closed	Kersha Eddy	Update the following reagents copied from LV1.0 into LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6799	Task	Closed	—	LOPS 1.2.0.1: WES/WGS automated regression	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6788	Defect	Verified	Leonid Garin	Reversion of changes to support ARM v1.19 schema resulted in blocked primer design jobs	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6771	Task	Closed	Monish Grover	[GHP/G64] WGS High Read Sample Investigation - LOPS data mining	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6755	Task	Closed	Klead Fusha	Improve Hybridization Runlog Processing performance	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6724	Defect	Verified	Lev Evstratov	Additional sgNIPT validations block rework for WES from Assay QC	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6722	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6707	Task	Closed	—	"Test_LibraryPrep_Blood_QcReview_AcceptPartial "Scala script is not creating sufficient amount of Sample to test Accept	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6703	Story	Verified	Kevin Detweiler	Provide Access to "Record Incident" Button on the Sample Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6698	Defect	Verified	Ray Ward	Serious Performance Issues in the Assay QC Review > Failed Samples Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6694	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6688	Sub-task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6682	Task	Opened	Klead Fusha	Hybrid Sample Selection Worklist - SampleNum	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6672	Task	Closed	—	Proof of concept: Multiple LabVantage DBs in a single RDS Instance	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6656	Task	Closed	Monish Grover	Investigation of a standalone WES/WGS LOPS instance	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6617	Story	Closed	Klead Fusha	Download Worklist - Hybridization - Set PoolNumber to 1 when Batch 2 is the only active batch on the plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6610	Task	Closed	Klead Fusha	Download Worklist - Hybridization - Sample Selection	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6609	Story	Verified	Swati Giri	WES/WGS: Tissue DNA Extraction: Record Water Reagent	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6602	Task	Closed	Hani Yakan	TF-MRD Vertical LOPS Planning Team - Sprint 41 [three times per week]	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6500	Task	Closed	Klead Fusha	Investigate and create a detailed guideline on preparing the data (TFAMP plate) to be ready for continuation of the work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6494	Task	Closed	Leonid Garin	gDNA Rework - Investigation & Planning (Leonid)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6392	Task	Closed	—	Manual WES / WGS regression testing for sgNIPT launch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6331	Task	Closed	—	WES/WGS automated regression	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6303	Story	Verified	Leonid Garin	Update WES and WGS Sequencing Run array method params to support v3 Sequencing Run Complete message	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6288	Story	Verified	Abdul Aziz	Array List Pages: Support Search by Array Barcode	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6250	Defect	Closed	Ariel Jirau	Date time fields for lops packages in the S3 buckets does not match what is expected	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4714	Story	Verified	Dennis Lin	WES/GHP Tissue DNA Extraction > Run Details: Support 'Ethanol' Reagent Aliquot Part Number	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-2894	Story	Verified	Leonid Garin	Blood Extraction Results Review: Exclude Filler Samples from 'Fail and Re-Extract' Action	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS Sprint 20250421 (41) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6562	Task	Closed	Matt Smith	Read-only access to the LOPS database for Monish Grover	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6546	Defect	Closed	Klead Fusha	Descriptive error message should appear in case runlog contains non-existent Source Plate Barcode	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6530	Task	Closed	Monish Grover	Investigation: Auto-Archive/Move Plates to ‘Historical Plate & Gels’ Tramstop when Assay QC is Complete	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6492	Story	Closed	Klead Fusha	tfMRD LibPrep QC Review - ReQuant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6385	Defect	Verified	Leonid Garin	Address WGS Regression in PromoteResultsToSourceArray - results are released in action and should be controlled by calle	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6325	Defect	Closed	Ron Enson	Appropriate test method isn't applied once rundata upload successfully finishes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6146	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Tissue DNA Plate Barcode	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6142	Story	Verified	Kevin Detweiler	WES/GHP: Tissue DNA Extraction: Validate Run Details Completed	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5983	Story	Verified	Kevin Detweiler	Plate List Page > WES Actions: Support Tasks for Plates in the WES Workflow (Test Only)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5817	Defect	Verified	Meghana Joshi	Unable to UnDispose or UnCancel samples that were Disposed/Cancelled directly from the Received state	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5722	Tweak	Closed	Vasiliy Kumaev	LOPS can perform pattern validations for parent and child/pool barcodes during sample creation event	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5706	Story	Verified	Meghana Joshi	Support a way to view the Zone Data values for Historical Assay QC Arrays	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5541	Task	Closed	Jonathan Quinn	Spike - Design manual extraction process	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4154	Defect	Verified	Dennis Lin	Capture QC Review: Rejected plate with one Failed Pool does not apply completed status to Passed Samples since the order	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-4091	Task	Closed	—	Create a test for check a build consistency	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)

LOPS Sprint 20250407 (40) (51 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6510	Task	Closed	Kersha Eddy	RunLog Policy "(Manual) - tfMRD Methylation Deamination - Change source layout to "tfMRD Methylation Oxidation Purifica	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6506	Task	Closed	—	Prepare for M7 and Hotfix 8 Deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6496	Task	Closed	—	LOPS 1.1.2.0 automated testing: Final round	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6493	Task	Closed	Surbhi Ray	gDNA Rework - Investigation & Planning (Surbhi)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6486	Task	Closed	—	Order Worklist Post-Pooling Quantification Plating by Well	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6471	Task	Closed	Hani Yakan	Setup test framework with team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6463	Sub-task	Closed	—	LOPS-6459 - 15-Apr-2025 - consolidate Mindy and Brad's notes into confluence	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6460	Task	Closed	Kevin Detweiler	LV LES module demo	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6459	Task	Closed	Hani Yakan	TF-MRD Vertical LOPS Planning Team - LOPS Sprint 20250407 (40) [three times per week]	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6417	Task	Closed	—	Investigate and fix issues related to sgnipt-integration-02 deployment with RDS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6401	Task	Opened	Ariel Jirau	Adjust development and test workloads resources in Kubernetes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6307	Task	Closed	Ariel Jirau	Merge development, check ear file and LivenessProbe enhancements into master branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6294	Task	Closed	Matt Smith	R/W Access to LOPS Prod DB	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6264	Task	In Progress	Hani Yakan	LOPS-6190 - Test the implementation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6238	Defect	Verified	Kevin Detweiler	WGS Tissue DNA Extraction Run Details: Test does not go to Completed Status	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6218	Task	In Progress	—	LOPS-6211 - go over existing step implementations and make sure corrections are not needed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6215	Task	Opened	—	LOPS-6211 - Review requirements with stakeholders and identify missing tickets	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6144	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Sequencing Tube Barcode	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6143	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Run Details Completed	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6101	Defect	Closed	—	Extra "WES Actions" button for RO user role on Test -> Plates & Gels List‎	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6092	Task	Closed	Dennis Lin	WES Workflow E2E Workthrough	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6089	Defect	Verified	Leonid Garin	Error Message when performing Sequencing Prep for G64 (Test only)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6084	Task	Closed	Hani Yakan	LOPS- 4410 - Create a test document showing how to test this ticket	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6061	Task	Closed	—	Generate list of lessons learned from LOPS Kubernetes production deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6060	Task	Closed	Ariel Jirau	Fix configserver integration with intfservice on Kubernetes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5992	Task	Closed	Leonid Garin	Create role for Read/Write Access to the database and provide appropriate DB access to ENG and EPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5974	Story	Verified	Dennis Lin	Run Details: Support Plate as 'Input/Output'	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5921	Defect	Verified	Meghana Joshi	WGS/WES Upload Library Prep Rundata - Required String 'ApplyArrayMethod' is null or empty.	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5907	Story	Verified	Dennis Lin	WES: Plate List Page > Update 'Create Run Details'	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5905	Story	In Grooming	Dennis Lin	WES: QC Batch List Page > WES Actions: Validate Task per Workflow Step for QC Batch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5717	Story	Ready for Development	Abdul Aziz	Blood Extraction: Validate Blood Extraction DNA Plate Barcode	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5689	Story	Verified	Dennis Lin	Capture Quant: Support 'Capture Quant' Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5657	Task	Closed	Brad Garrett	Spike - Single Sample Rework and Quant Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5568	Sub-task	Closed	—	Produce Sequence Run Message V2	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5429	Tweak	Closed	—	Updates for Array Method for Post-Pooling Quantification Reading	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5406	Task	Code Review	Ariel Jirau	Document Engineering Focused Deployment Checklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5343	Defect	Verified	Leonid Garin	Wes On X: Extraction + Library Quant: Known Concentration values are not populated for Quant Plate Standards after Quant	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5099	Sub-task	Closed	Ariel Jirau	Create M4-k8s build to deploy it on integration env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4937	Defect	In Progress	Mikhail Terpugov	Refactoring of code related to the fix for LOPS-4805	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4852	Story	Closed	Meghana Joshi	Support Sequencing Run Complete message processing using the v2 topic	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-4837	Task	Reopened	—	Create a plan of migration from Rancher to k8s for LOPS and LV1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4046	Story	Development Blocked	Ron Enson	Remove or Obsolete the LabOperator and LabSupervisor jobtypes in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4025	Defect	Ready for Development	—	Error message when clicking 'Create Consumable Arrays' button on the Add Consumable Lot page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3989	Task	Opened	—	Sub-Task - Check all users and update the users that require Read Only jobtype to be set to Read Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3075	Task	Blocked	—	Move IntfService Source Code and Job to Different Repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-2903	Story	Development Blocked	Hani Yakan	Extraction QC Review: Approve Plate > NOT Re-Queue Failed Blood Filler Samples for Blood Extraction (Test Only)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-2453	Task	Opened	Mai Ton-Nu	EQMT Type and Model data clean-up	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1818	Defect	Opened	Abdul Aziz	Wes On X: Tissue DNA Extraction: Run Details - List reagents vertically	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-1749	Defect	Verified	Kevin Detweiler	Wes On X: Tissue DNA Extraction > Run Details: Selecting instrument and reagents is not required to proceed	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-1480	Tweak	Development Blocked	—	Create and manage instrument schedules at the model level	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)

LOPS Sprint 20250324 (39) (77 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6305	Task	Closed	Laura Dietrick	Activate ITT000010 and ITT000012 transaction types	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6304	Task	Closed	Monish Grover	Manually activate ITT000010 and ITT000012 transaction type in e2e env	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6260	Task	Closed	Ariel Jirau	Integration Environments Support (post k8s migration)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6255	Task	Closed	Ize Imai	Manual removal of DestTubeBarcode parameter	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6254	Defect	Verified	Leonid Garin	Record Tissue DNA Extraction triggers Exception	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6244	Story	Verified	Monish Grover	Update gDNA RunDesign csv file to populate Plate 1 field with unique plate serial number + lot number + expiry	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6237	Defect	Verified	Sri Gorantla	Wrong transfer method is applied to gDNA Sequencing Prep plate.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6229	Defect	Closed	Sri Gorantla	Unable to test approve QC batch containing samples with Override status set to "Re-run"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6226	Task	Closed	Ize Imai	Knowlege share for ReagentType and Units	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6216	Story	Verified	Olawale Dada	Update PacBio Sequencing Plate reagent to include fields to track Serial number, lot number and expiry	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6212	Task	Closed	—	Reorganization of test cases	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6207	Story	Verified	Ray Ward	Update specification for sgNIPT gDNA Pool Tapestation quant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6206	Task	Closed	—	Correct Worklist Policy Configs for Ligation Purification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6205	Story	Verified	Sri Gorantla	Update sgNIPT gDNA Pool Purification worklist to include SourceTube field and remove SourceWell	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6201	Defect	Verified	Michael Livingston	Run Details is created only for the 1 plate after creating 3 plates for PostLig Transfer	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6197	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 39	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6193	Task	Closed	Leonid Garin	Adjust the scheduled task to retrieve the schemas list from the master source instead of CI_SCHEDULED_JOB-LOPS-5516_uplo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6183	Defect	Verified	—	sgNIPT gDNA Sequencing RunDetails TM Equipment should be mandatory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6174	Defect	Closed	Anatoly Rybak	Test Only: Rundetails not populated for PEXT rundata consumption	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6173	Defect	Closed	Justin Jones	LOPS EQP data entry for QS QC batch missing vortex and Koda Sense	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6169	Task	Closed	Ariel Jirau	Fix Kubernetes deployments on testing environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6136	Defect	Verified	Krishna Tanuku	Unnecessary dilution is defined on sgNIPT gDNA CFTR LR-PCR Barcoding layout	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6135	Story	Verified	Krishna Tanuku	Update Array Zone Data Entry to sort by Array Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6133	Task	Closed	—	Assay-43 test cases update and clean up	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6121	Task	Closed	Vasilii Sevriugin	Merge latest master changes into M7 branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6119	Story	Verified	Kevin Detweiler	WES: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6118	Task	Closed	Liubomyr Skorokhod	Process E2E Test Build1 samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6110	Story	Closed	Surbhi Ray	Automation of the Size Selection 2 KingFisher step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6098	Story	Verified	Ize Imai	expand column sort to apply to samples on plate OR rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6066	Defect	Closed	—	Runlog processing is not recorded in SDI Group	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6054	Sub-task	Closed	Brad Garrett	E2E Hotfix for gDNA Extraction parameter change	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6042	Task	Closed	Vasilii Sevriugin	RMAN: the database archive logs should be deleted	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6037	Defect	Verified	Swati Giri	Unable to process gDNA Normalization runlog	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6023	Task	Closed	Ariel Jirau	Enable Kubernetes deployments from conductor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6002	Defect	Closed	Monish Grover	gDNA Pre-extraction runlog can only be uploaded for samples, not for NTC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6001	Defect	Verified	Ize Imai	Plate to Rack loader for gDNA normalization validate that the box must be empty	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5976	Task	Closed	Gianna Bell-Eunice	Migrate to kubernetes on PSPC and E2E environments	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5968	Task	Closed	—	LOPS 1.1.2.0 regression automated testing: Platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5967	Task	Closed	—	LOPS 1.1.2.0 automated testing: WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5966	Task	Closed	—	LOPS 1.1.2.0 automated testing: WES	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5964	Task	Closed	—	Run regression for Reagent sync with new Kafka version 1.59	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5960	Task	Closed	Kathy Dao	cfDNA Manual Extraction design	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5953	Task	Closed	Ariel Jirau	Fix labworkflows-labvantage configuration for daybeforedeploy-01	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5950	Story	Verified	Brandon Culver	Update RunDetail processing for hardcoded PL variant and paramtype issue	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5949	Defect	Verified	Kevin Detweiler	Address Error when generating 'Extraction QC Report' and 'Library QC Report'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5906	Task	Closed	—	Deploy LOPS 1.1.1.2 (M6 Kubernetes) into Production (Rancher to Kubernetes Environment Migration)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5904	Story	Closed	Vasiliy Kumaev	Spike - investigate options for applying array layout after array creation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5858	Task	Closed	—	Generate new or uplift current queries to account for the changed data model related to Pipeline metrics in sgNITP	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5820	Story	Verified	Vasiliy Kumaev	Update Spectramax processor for result promotion to source array and Quant Plating AM and Quant Review AM creation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5812	Sub-task	Closed	—	7 - Move to SQA	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5811	Sub-task	Closed	—	6 - Find Reviewer	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5810	Sub-task	Closed	—	5 - Create Spec	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5809	Sub-task	Closed	—	4 - Create Merge Request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5808	Sub-task	Closed	—	3 - Implement, Test, Export	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5807	Sub-task	Closed	—	2 - Create Branch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5806	Sub-task	Closed	—	1 - Link Requirements	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5799	Story	Verified	Meghana Joshi	Support for barcode validations when Pooling Tissue Slides	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5786	Story	Verified	Monish Grover	Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5680	Task	Closed	Ariel Jirau	Provide k8s configuration support for gspintegration-01 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5646	Story	Verified	Ray Ward	Associate NR0835 to the LR-PCR barcoding array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5639	Story	Verified	Meghana Joshi	Support for barcode validations when creating Tissue Slides	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5605	Story	Verified	Kevin Detweiler	Assay Details Page: Add a 'Workitem Description' column next to 'Workitem ID'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5563	Story	Verified	Vasilii Sevriugin	PacBio LRPCR - Update Sequencing Run Complete Processing Code (array lookup)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5532	Story	Verified	Ize Imai	Update Worklist generator to exclude failing Samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5367	Story	Verified	Ize Imai	cfDNA Sequencing Prep Pool Quant runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5348	Story	Verified	Sri Gorantla	Residual Quant Array method/layout	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5323	Task	Closed	Laura Dietrick	Update sgNIPT User Guide for cfDNA Process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5318	Story	Verified	Leonid Garin	Update Pipe Launch Request for WES and G64 to query using old and new attribute types for assayRequestDependencies	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5254	Story	Verified	Sri Gorantla	gDNA Library Prep Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5166	Story	Verified	Leonid Garin	Allow users to re-queue partial plate of patient blood samples that have failed extraction quant for pre-extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5155	Story	Closed	Krishna Tanuku	PostLib Residual Quant test method and parameter list and PostLib Quant group test method update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4675	Story	Verified	Vasiliy Kumaev	Allow sample rework from Assay QC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4098	Story	Verified	Sri Gorantla	gDNA Master Mix part number set up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3301	Story	Verified	Dennis Lin	Extraction/Library QC: Update Plate-Level Sample QC (Minimum Number of Samples)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2747	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (2 of 3 - Sample Results)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2709	Story	Verified	Vasiliy Kumaev	cfDNA PostLib Quant Result (Spectramax) - Runlog Processor	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2489	Defect	Verified	Kevin Detweiler	Sequencing Prep: Reagents not validated as required (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 20250310 (38) (63 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6165	Story	Verified	Sri Gorantla	Associate LR-PCR barcode primer plates to gDNA LR-PCR barcoding plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6158	Defect	Verified	Monish Grover	Update the worklist prefix for Post Ligation Transfer step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6100	Story	Verified	Monish Grover	Add Approval Types to sgNIPT Quant Steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6087	Task	Closed	Leonid Garin	Update Tool/script(s) to create cfDNA and tfMRD sequencing arrays per correct array layout	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6072	Task	Closed	Ariel Jirau	Migrate master into develop branch for both infr and main application repositories (Kubernetes conversion)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6068	Defect	Verified	Vasiliy Kumaev	User is unable to Log Exceptions from the Assay Maint page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6057	Defect	Verified	Michael Livingston	Restore previously implemented Verso Retrieve nodes for CFTR, HBA, HBB	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6045	Task	Closed	Nikita Tilkov	Add a host for the second DataBase for the Reagent Sync testing environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6044	Task	Closed	Mikhail Dubrovin	Kafka 1.59.0 connectors work with unpredictable delay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-6029	Defect	Verified	Brandon Culver	Fix Library Prep runlog processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-6028	Tweak	Verified	Leonid Garin	Hybrid Capture - Update seq manifest processor to save Pipeline Json Id to array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6018	Task	Closed	Gianna Bell-Eunice	Deploy latest develop branch on Sandbox, PSPC and E2E environments	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6015	Story	Verified	Sri Gorantla	Consumable Update to Array Method sgNIPT cfDNA Library Amplification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6007	Task	Closed	—	Testing of a strategy for a resequencing planned deviation for G64	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6005	Defect	Verified	Kathy Dao	NR0364 reagent cannot be loaded to sgNIPT gDNA Extraction plate.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5993	Tweak	Closed	—	Update Threshold for G64 Sequencing Run Metric	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5986	Defect	Verified	Michael Livingston	SGNIPT_CFDNA_CAPTURE worklist does not have zero padded SourcePosition and DestWell fields (A01)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5982	Defect	Verified	Ray Ward	PlateInfo section should not be in SGNIPT_CFDNA_HYBRID worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5977	Defect	Verified	Lev Evstratov	Quant AM is not applied to Quant plate (-QIT) during cfDNA PostLib Quant Plating (Biomek)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5962	Sub-task	Closed	Leonid Garin	Please add support for lr-pcr controls in pipeline launch request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5946	Defect	Closed	Bryan Jensen	LOPS doesn't display G64 sample and assay if sample was converted from X16 and was routed to Ashion/Psnl (env with OOnSS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5935	Story	Verified	Kevin Detweiler	GHP: Update Assay Template Description	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5929	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 38	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5928	Sub-task	Closed	Meghana Joshi	Deploying error - unbound variable in maintenance.sh script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5911	Defect	Verified	Michael Livingston	DestPosition for Verso Retrieve worklists does not accurately reflect possible rack positions	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5910	Story	Verified	Krishna Tanuku	Create a new run detail group for sgNIPt cfDNA PostLig Pur manual step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5909	Story	Closed	—	Test only: Trigger LRPCR pipeline via REST API (Controls)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5888	Defect	Verified	Sri Gorantla	sgNipt: cfDna - sNIPT PostLig Transfer Specification always fails a sample, prevents subsequent TM assignment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5870	Tweak	Verified	Sri Gorantla	Update sgNIPT Verso Retrieve DestPosition Query for Row Major Orientation for gDNA downstream assays (CFTR, HBA, HBB)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5855	Task	Closed	Alex Pakhunov	Investigation :: Debezium doesn't post LV DB updates to Kafka	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5834	Story	Verified	Swati Giri	Update SourceWell field in worklists to SourcePosition	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5830	Defect	Closed	Meghana Joshi	Users encounter error when using Bulk Retest from the Manage Tests page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5796	Task	Closed	Swati Giri	Add Equipment needed for sgNIPT E2E testing to E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5795	Task	Closed	—	Reagent Lot creation in sgNIPT E2E environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5792	Defect	Closed	—	Sample container not assigned to gDNA PEXT to EXT transfer method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5790	Story	Verified	Ray Ward	Update LR-PCR Primer Plate maps to add Amplicon #/Multiplier and size multiplier	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5770	Story	Closed	Bryan Jensen	Manual Run Details: Prevent Duplicate Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5768	Task	Closed	—	Test Behavior for Failed Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5764	Story	Verified	Michael Livingston	cfDNA Post Ligation Transfer runlog processor, Library Amplification worklist generator, PostLig Transfer array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5683	Story	Verified	Olawale Dada	gDNA Barcode Primer Plate maps consumable type updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5658	Story	Verified	Klead Fusha	cfDNA Sequencing Prep Pool Dilution runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5653	Tweak	Verified	Joeseph Colca	Update array list page queries to include sgNIPT array methods for assay QC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5635	Defect	Verified	Kevin Detweiler	Sequencing Prep: Plate Barcode should be mandatory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5586	Task	Closed	Ariel Jirau	Coordinate creation of a new environment for E2E UAT for tfMRD	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5516	Task	Closed	Leonid Garin	Download production JSON schemas from the server to the S3 bucket once a day	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5490	Story	Verified	Meghana Joshi	List Array Methods dropdown in the Assay QC filter in alphabetical order	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5389	Story	Verified	Kevin Detweiler	WES: Extraction Samples Page > Display Assay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5360	Story	Verified	Olawale Dada	cfDNA Library Prep Runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5320	Task	Closed	—	Test Only: cfDNA sequencing manifest generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5242	Story	Verified	Klead Fusha	gDNA LR-PCR Pool Purification Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5237	Story	Verified	Krishna Tanuku	Hybrid Capture Day 1 Hybridization Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5235	Story	Verified	Klead Fusha	gDNA LR-PCR Pooling Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5233	Story	Verified	Klead Fusha	gDNA LR-PCR Quantification Plating - Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5232	Story	Verified	Mai Ton-Nu	gDNA LR-PCR Quantification Worklist Generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5230	Story	Verified	Lev Evstratov	gDNA LR-PCR Barcoding Worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5203	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number setup and name updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5080	Story	Verified	Michael Livingston	gDNA LR-PCR Pool Purification worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5028	Story	Verified	Kevin Detweiler	Sample List Page > Display Patient Sample Barcode for Samples on Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3882	Story	Verified	Leonid Garin	Update Default ArrayRunData Processing for sgNIPT	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2708	Story	Verified	Gianna Bell-Eunice	Library amplification purification instrument integration	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS Sprint 20250224 (37) (99 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5985	Tweak	Verified	Brandon Culver	Update gDNA Ext quant plate suffix check to -LREXT	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5963	Task	Closed	—	Run automated regression for new Kafka version 1.59	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5959	Defect	Verified	Michael Livingston	sgNipt: Assay 43 - Controls are not propagated during HYB2 -> Pool (Pool Dilution) transfer	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5945	Task	Closed	Ize Imai	Knowledge share for asynchronous actions in LV	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5943	Defect	Verified	Brandon Culver	Unable to generate gDNA Normalization worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5924	Task	Closed	—	Merge 1.1.0.2, 1.1.1.1, 1.1.0.1, 1.1.1.0 items in Jama to Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5917	Story	Verified	Ray Ward	QC Batch RunDetails Updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5915	Task	Closed	Mehmet Ali Eken	Resolve Overwritten User REST API Access Role Assignment configuration due to merge conflicts	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5903	Story	Closed	—	Test only: LRPCR - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5902	Story	Verified	Meghana Joshi	Plate to Rack processor and loader for gDNA normalization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5891	Defect	Verified	Krishna Tanuku	gDNA Extraction runlog uploading returns error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5884	Defect	Verified	Joeseph Colca	sgNipt: cfDna - Two Library Quant Test Methods in Assay-43 Assay Template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5881	Defect	Closed	Meghana Joshi	Users encounter error when Failing an Assay from Assay QC or the Assay Maint page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5880	Story	Verified	Sri Gorantla	Updates to sequencing run test method parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5879	Story	Verified	Mai Ton-Nu	Create cfDNA and gDNA reagents in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5877	Defect	Verified	Vasiliy Kumaev	Error encountered during QuantResult post-processing. Failed with message: 'null'"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5875	Task	Closed	Meghana Joshi	Retest LOPS-4939 After Refactoring	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5874	Task	Closed	—	Communicate Child Sample Creation issue to VantageCare	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5873	Defect	Verified	Ize Imai	Restore missing buttons removed by M7 merge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5872	Task	Closed	Ariel Jirau	Add confluence page with steps to prepare a RDS development instance for datamesh integration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5868	Task	Closed	Vasilii Sevriugin	Include 'autotest' env name into list for labworkflow Kafka schema register - register-schemas.sh	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5862	Story	Verified	Lev Evstratov	Natera barcode is not being populated after cfDNA Extraction runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5837	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration, E2E, and user sandbox environments	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5831	Sub-task	Closed	Ron Enson	Worklist Generation Error Array Method sgNIPT cfDNA LibraryPrep Complete	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5823	Defect	Verified	Joeseph Colca	CreateSequenceManifest button has reappeared on Arrays List page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5818	Story	Closed	Leonid Garin	Test only: Update which outputs are being recorded to assay from pipeline result json (LRPCR)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5814	Story	Verified	Mehmet Ali Eken	Restrict sample and array barcode editing to Admins only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5773	Defect	Verified	Mehmet Ali Eken	Missing/inaccessible "Close Incident" button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5765	Defect	Closed	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method cannot be performed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5750	Sub-task	Closed	—	7 - Move to SQA	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5749	Sub-task	Closed	—	6 - Find Reviewer	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5748	Sub-task	Closed	—	5 - Create Spec	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5747	Sub-task	Closed	—	4 - Create Merge Request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5746	Sub-task	Closed	—	3 - Implement, Test, Export	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5745	Sub-task	Closed	—	2 - Create Branch from release/Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5744	Sub-task	Closed	—	1 - Link Requirements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5716	Task	Closed	—	LOPS 1.1.1.2 automated testing: Platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5715	Task	Closed	—	LOPS 1.1.1.2 automated testing: WGS (k8s)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5714	Task	Closed	—	LOPS 1.1.1.2 automated testing: WES (K8s)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5713	Task	Closed	—	Labworkflows local environment validation: validate that configuration changes made for Kubernetes does not affect runn	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5709	Defect	Verified	Ray Ward	Complete? param missing from sgNIPT cfDNA Hybrid and Capture array methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5708	Story	Verified	Monish Grover	Updates to gDNA extraction quant master data to support QC Review on orignal extraction plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5701	Tweak	Verified	Leonid Garin	Unable to generate QC batch comprised of patient streck tubes after isolation runlog processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5686	Task	Closed	Ariel Jirau	Configure Fulfillment DMS Service integration with development RDS Oracle instance (g64 e2e)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5660	Task	Closed	Valeria Vargas	Prep for S2S Demo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5652	Story	Verified	Ron Enson	Create cfDNA and gDNA reagents in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5649	Story	Verified	Dennis Lin	Blood Extraction Results Review: Hide 'Log Exception' Action	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5645	Defect	Verified	Klead Fusha	HybCap Day 2 Runlog uploading returns error.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5634	Sub-task	Closed	—	8-LOPS-5512 subtask - Move ticket to SQA	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5633	Sub-task	Closed	—	7-LOPS-5512 subtask - Find someone to review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5632	Sub-task	Closed	—	6-LOPS-5512 subtask - Create specification(s)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5631	Sub-task	Closed	—	4-LOPS-5512 subtask - Create a merge request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5630	Sub-task	Closed	—	3-LOPS-5512 subtask - Implement, test the change and export	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5629	Sub-task	Closed	—	2-LOPS-5512 subtask - Create a branch from release/Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5628	Sub-task	Closed	—	1-LOPS-5512 subtask - Link the requirements with a reader friendly link	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5606	Task	Closed	Jonathan Quinn	Investigate barcode validation option using params for plasma manual/partial isolation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5595	Story	Closed	Swati Giri	Updates to cfDNA and gDNA sequencing run test method parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5588	Story	Verified	Kathy Dao	Associate Creation of RunLog TM and and update to MD	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5559	Story	Verified	Meghana Joshi	Update processor of sgNIPT pipeline-result messages to use sdidataid as key	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5556	Story	Closed	—	Update LOPS API Pipeline Outputs to also send collection kit in requested assay	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5538	Task	Closed	Valeria Vargas	Spike - Uploading Runfiles and Parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5524	Tweak	Verified	Mehmet Ali Eken	Add additional Exception Codes for sgNIPT	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5520	Task	Closed	—	cfDNA updates - Add new sample type for new NA12878 part - NR0835	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5518	Story	Verified	Olawale Dada	Set FFE upper and lower thresholds for cfDNA control lots in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5512	Story	Closed	Ray Ward	Update End Repair Plating Worklist Policy Node for multiple rack sample ranges	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5485	Task	Closed	Meghana Joshi	Merge M7 (1.1.2.0) to Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5477	Story	Verified	Leonid Garin	Test only: Have the ability to record pipeline outputs (file paths) from pipeline result (LRPCR)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5400	Story	Closed	—	Test only: NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5388	Story	Verified	Swati Giri	WES: Extraction Samples Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5386	Story	Closed	Alex Pakhunov	Update the reagent sync to also sync the u_containerbarcode/matrix barcode fields.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5335	Story	Verified	Sri Gorantla	Update HBB barcoding array layout and update for HBB Quant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5314	Story	Verified	Kevin Detweiler	Review of read-only job type changes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5311	Story	Verified	Klead Fusha	cfDNA Library Prep End Repair Runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5278	Story	Verified	Leonid Garin	Trigger Hybrid Capture pipeline via REST API - Continue 2 (ControlFFE)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5260	Story	Verified	Leonid Garin	Update Reagent Validation API to matrix barcode	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5241	Defect	Closed	Monish Grover	Revert changes merged in G64 for LOPS-2428	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5239	Story	Verified	Krishna Tanuku	Hybrid Capture Day 2 Capture Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5231	Story	Verified	Klead Fusha	gDNA LR-PCR Barcoding Runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5201	Story	Verified	Mehmet Ali Eken	Investigate and implement REST action restrictions	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5190	Task	Closed	Leonid Garin	Remove mock test/array/transfer method which were involved in LOPS-1542 for testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5142	Story	Verified	Sri Gorantla	Remove calculations for gDNA LR-PCR quant and update master data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4994	Story	Verified	Lev Evstratov	Allow users to select the same plate for different PacBio sequencing runs in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4903	Story	Verified	—	PacBio LRPCR - Assay QC UI (1 of 3 - General, RunResult, Batch)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4082	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4080	Task	Closed	Leonid Garin	Create Script and Process to Check Production for Required Manual Updates Post Deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3754	Story	Verified	Swati Giri	WES: Tissue Extraction Re-Run: Display 'Tissue Extraction Run Number' for Tissue Samples Queued for Tissue Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3427	Story	Verified	Ray Ward	Track Input/Output Plate Barcodes in Run Details across Automated Workflow Steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2800	Story	Verified	Klead Fusha	Implement Rack to Plate Transfer Class for sgNIPT Runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2799	Story	Verified	Ron Enson	Hybrid Capture Day 1 Hybridization worklist generation - Impl work	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2764	Story	Verified	Vasiliy Kumaev	PacBio LRPCR- Assay QC UI (3 of 3 - Control Results)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2751	Story	Closed	—	Support actions at gDNA extraction quant results review	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2739	Story	Verified	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2662	Story	Closed	Olawale Dada	gDNA Normalization runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2652	Story	Verified	Krishna Tanuku	gDNA Pre-extraction and Extraction runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2473	Story	Verified	Gianna Bell-Eunice	gDNA Sample batching protocol - implementation work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2429	Story	Verified	Lev Evstratov	cfDNA Post Library Quant Plating (Biomek) - Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS Sprint 20250210 (36) (100 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5869	Sub-task	Closed	Vasilii Sevriugin	ProcessAssayRequestJson fails for sgNIPT Algs request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5826	Task	Closed	Ariel Jirau	Enhance Lambda code to be able to cope with different redshift schemas	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5821	Task	Closed	—	SPIKE: Investigation of gDNA Extraction Quant sample and plate evaluation in LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5813	Defect	Verified	Ize Imai	WES: reagents are not available on Run Details View page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5800	Tweak	Verified	Vasilii Sevriugin	Refactor Assay Code Whitelisting to allow more Assay Codes to be Added	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5798	Task	Closed	Mikhail Terpugov	Set up e2e env for s2s shipment for tfmrd workflow.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5787	Defect	Verified	Olawale Dada	CFTR Primer Plate 1 is missing Well Positions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5763	Defect	Closed	Ize Imai	Worklist Generation Select Process Type incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5758	Tweak	Verified	Michael Livingston	Updates for gDNA Pre-extraction and Isolation worklist fields	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5755	Task	Closed	—	Run automated regression test for hotfix 1.1.0.2 Platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5754	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5753	Task	Closed	—	Run limited automated regression test for hotfix 1.1.0.2 WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5751	Defect	Verified	Dennis Lin	WGS: Extraction QC Review error: Could not execute script from iframe	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5740	Task	Closed	Krishna Tanuku	Deploy latest LOPS build to sgNIPT E2E Environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5726	Story	Closed	Vasiliy Kumaev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3) Part 2 - Batches	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5712	Task	Closed	Matt Smith	Account for access to LOPS Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5710	Defect	Verified	Monish Grover	Assay-41 is not completed automatically when all workitems are completed.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5704	Tweak	Closed	Alex Pakhunov	Updates to Support ParamList Export in Reagent Type Exports	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5699	Defect	Verified	Leonid Garin	If multiple genes are requested for a sample, only one 'sgNIPT gDNA Sequencing Run' dataset is marked as Completed when	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5687	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 20 (36)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5684	Task	Closed	Ariel Jirau	Merge release/LOPS-1.1.1.0 into Kubernetes branches in preparation for production deployment readiness	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5682	Task	Closed	Alex Pakhunov	Update Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5681	Task	Closed	Michael Livingston	Restore missing/lost configuration to paramlist sdc	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5678	Task	Closed	Kevin Detweiler	Identify root cause for missing workflow step start/end timestamp	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5672	Defect	Verified	Monish Grover	Worklist cannot be generated and downloaded for Plasma Isolation samples.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5669	Task	Closed	Valeria Vargas	Include reagent type in patch init	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5667	Sub-task	Closed	—	7-LOPS-5562 subtask - Move ticket to SQA	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5666	Sub-task	Closed	—	6-LOPS-5562 subtask - Find someone to review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5665	Sub-task	Closed	—	5-LOPS-5562 subtask - Create specification(s)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5664	Sub-task	Closed	—	4-LOPS-5562 subtask - Create a merge request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5663	Sub-task	Closed	—	3-LOPS-5562 subtask - Implement, test the change and export	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5662	Sub-task	Closed	—	2-LOPS-5562 subtask - Create a branch from release/Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5661	Sub-task	Closed	—	1-LOPS-5562 subtask - Link the requirements with a reader friendly link	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5659	Defect	Verified	Mikhail Makarin	Currently there is a restirction that only allows one plate range instead of allowing for multiple ranges.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5647	Task	Closed	Mai Ton-Nu	Clean up JAMA TestScripts hierarchy and linking to support SQE Automation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5642	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration environment for LOPS-5542	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5624	Task	Closed	Kevin Detweiler	Activity start and end timestamps not populated for hybrid capture and sequencing steps for all cases	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5617	Task	Closed	Mehmet Ali Eken	Disable Debug setting on Event Plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5616	Task	Closed	Vasilii Sevriugin	Validate User configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5615	Task	Closed	Kevin Detweiler	Commit Changes to DKC-100004 - DKC-100008 and DKC-100014 - DKC-100018 to the repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5611	Story	Verified	—	Test only: PacBio LRPCR - Record sequencingSampleId to assay attributes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5609	Story	Verified	—	Sequencing Prep: Support Selection of 'Inline QC Valid' Reagents (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5598	Defect	Closed	—	The gDNA quantification result does not align with the specified rule conditions.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5594	Story	Verified	Alex Pakhunov	Illumina NGS - Record sequencingSampleId to assay attributes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5593	Story	Verified	Kathy Dao	Plasma isolation calculation updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5584	Task	Closed	Ariel Jirau	Fix broken "Integration Test" Step on Gitlab Pipeline Testing Stage for Kubernetes Branch Labworkflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5583	Defect	Verified	Ize Imai	Plate load query for gDNA Pre-extraction is incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5575	Story	Verified	Olawale Dada	Plasma isolation and cfDNA Extraction MD updates for Runlog (Runlog Headers)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5573	Defect	Verified	Michael Livingston	gDNA LR-PCR Pool Process is not automatically applied after gDNA LR-PCR Process is Completed.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5562	Story	Verified	Ray Ward	Update End Repair Array method to add cfDNA controls in the correct positions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5555	Story	Verified	Leonid Garin	Update sequencingSampleId sent in sgNIPT HC sequencing manifest	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5554	Task	Closed	Leonid Garin	Investigate use of sdidataid of samples in sgNIPT gDNA Sequencing Run Test Method as unique identifier (sequencingSample	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5542	Defect	Closed	Alex Pakhunov	Page gets stuck during manual child sample creation in Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5529	Defect	Verified	Klead Fusha	sgNIPT cfDNA LibAmp Purification Runlog cannot be processed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5519	Task	Closed	Ariel Jirau	Add k8s liveness probe to restart pod in case of invalid EAR File	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5514	Defect	Verified	Michael Livingston	lr-pcr-pb-v0 Assay Template is missing "Gene" column and "Support Gene Routing" check box.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5492	Story	Verified	Leonid Garin	LR-PCR Send unique sequencingSampleId in the sequencing manifest to Pipelines	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5487	Story	Verified	Sri Gorantla	Update calculations for Partial Isolation parameter test to capture correct parameter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5486	Defect	Verified	Meghana Joshi	WESX assay QC pages is broken - missing Complete Review, Array Genealogy, approval/rejection buttons	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5476	Story	Verified	Krishna Tanuku	Update SourcePosition entry for End Repair worklist to remove "0" between the row and column for the tube position	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5468	Task	Closed	Hani Yakan	Investigation of the configuration of the "intf_lops_user" LOPS user	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5465	Story	Verified	Vasilii Sevriugin	Configure deduplication of pipeline-result messages	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5462	Story	Verified	Isaac Vargas	cfDNA PostLig Transfer Worklist Policy Configuration and MD updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5460	Task	Closed	Valeria Vargas	Spike - Tracer Handling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5442	Defect	Verified	Michael Livingston	Plate calculations for gDNA Extraction quant are incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5413	Task	Closed	Vasilii Sevriugin	Recovery of the changes for LOPS-4627	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5405	Story	Verified	Leonid Garin	Update which outputs are being recorded to assay from pipeline result json (HC, Alg)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5393	Tweak	Closed	Mikhail Makarin	Updates to Support Base Test Method Export in Reagent Type Exports	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5376	Story	Verified	Lev Evstratov	new Quant Result Processor - gDNA extraction quantification result runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5363	Story	Verified	Gianna Bell-Eunice	cfDNA PostLib Quant Plating - Worklist Generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5288	Story	Verified	Leonid Garin	Extraction Batch Runlog Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5256	Story	Verified	Vasilii Sevriugin	Add Okta authentication to establish a secure connection between LOPS and LOPS-PIPE Connector	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5246	Story	Verified	Leonid Garin	PacBio LR-PCR - Invocation of Sequence Manifest when the Sequencing Run Complete message is processed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5238	Story	Verified	Monish Grover	Hybrid Capture Day 2 Capture Worklist Generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5236	Task	Closed	—	Create Confluence Page for Interview Questions and Process	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5186	Story	Verified	Michael Livingston	Updates needed for sample result evaluation and spec for gDNA extraction quant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5151	Story	Verified	Ize Imai	Create reagents importer process in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5055	Story	Verified	Olawale Dada	Remove calculations for cfDNA PostLib quant and update master data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5014	Story	Verified	Gianna Bell-Eunice	Samples that have been plated once are not able to be loaded onto other plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4939	Story	Verified	Meghana Joshi	Support for the PD assay when there are multiple source samples for the sequencing assays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4906	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (3 of 3 - Control Results)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4905	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (2 of 3 - Sample Results)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4870	Story	Verified	Leonid Garin	Ability to assign multiplier variables on gDNA primer plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4621	Story	Verified	Mai Ton-Nu	Add additional required Reagents for GHP workflow to the init reagents script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4611	Story	Verified	Michael Livingston	gDNA Normalization worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4204	Task	Closed	—	Change LOPS User Timeout Threshold to Release Licenses and Connections	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4102	Story	Verified	Olawale Dada	gDNA LR-PCR Primer plate setup (CFTR)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4032	Story	Verified	Sri Gorantla	cfDNA Barcode Primer Plate plate maps updates - consumable type	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3975	Story	Verified	Mikhail Terpugov	LOPS Verso Retrieve runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2804	Defect	Verified	Meghana Joshi	WES Sequencing - Flowcell single use is not being validated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2801	Story	Verified	Gianna Bell-Eunice	gDNA Library Prep Worklist Generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2731	Story	Verified	Vadim Gusev	PacBio LRPCR - Assay Disposition Handling in the Pipeline Results processing (LRPCR Pipe Result 3 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2705	Story	Verified	Brandon Culver	cfDNA Sequencing Prep (pool quant and dilution) worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2678	Story	Verified	Lev Evstratov	gDNA extraction quantification M200 result runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2538	Story	Verified	Monish Grover	Plasma Isolation instrument integration - Worklist Generation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2529	Story	Verified	Michael Livingston	cfDNA Extraction worklist generation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2507	Story	Verified	Vadim Gusev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2270	Story	Verified	Alex Pakhunov	Trigger Alg pipeline via REST API	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-1533	Story	Verified	Vadim Gusev	Add processor of LRPCR pipeline-result message (LRPCR Pipe Result 1 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS Sprint 20250127 (35) (78 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8656	Story	Opened	Kevin Detweiler	CLONE - WES: Disposal for Sample in Blood Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-7164	Task	Closed	Ariel Jirau	Request certificate for sgNIPT Prod domain	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5835	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 37	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5621	Task	Closed	Gianna Bell-Eunice	Clean up JAMA TestScripts hierarchy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5612	Task	Closed	Kevin Detweiler	Prod: Investigate creation of duplicate incidents	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5610	Task	Closed	Kathy Dao	KD Demo Prep Sprint 19 (35)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5599	Defect	Closed	Meghana Joshi	Unable to create 15mL PLM Falcon tube child samples for multiple samples upon completion of QC Batch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5587	Task	Closed	Ariel Jirau	Fix broken config server integration on Kubernetes branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5582	Defect	Closed	Krishna Tanuku	Worklist generation is not supported for the Array Method: AM - sgNIPT cfDNA PostLig Purification - 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5574	Tweak	Verified	Mikhail Makarin	Add sgNIPT and tfMRD assay codes to LOPS assay code filter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5571	Task	Closed	Matt Smith	Create RO Database User in LOPS Prod for Kevin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5570	Task	Closed	Kevin Detweiler	Investigation: User observed error in Prod when uploading Blood Extraction Rundata with Sample with 'Invalid' Result (A1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5569	Task	Closed	Kevin Detweiler	Investigation of Root Cause for Block at Blood Extraction Results Review (A12-BDNA)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5566	Task	Closed	Monish Grover	Deploy latest sgNIPT release to sgnipt-integration-02 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5564	Task	Closed	Klead Fusha	Investigation: Blood Extraction Results Review: Not required to log exception for samples with 'valid' and 'unclear' res	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5553	Task	Closed	Alex Pakhunov	Update python scripts to address latest changes for toDo list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5549	Task	Closed	Hani Yakan	Change Natera's Export for users to include force update	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5534	Defect	Verified	Meghana Joshi	Automatically Reject/Unreject well in QC Review Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5528	Task	Closed	Alex Pakhunov	Transactions are postponed for hours	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5526	Story	Verified	Michael Livingston	Restore gene routing config to assay template in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5521	Task	Closed	Ariel Jirau	Set "Validate Kafka Schemas" Gitlab pipeline validate stage step to manual to avoid failing the release pipeline	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5510	Task	Closed	Swati Giri	Deploy LOPS-1.1.0.0 to the G64 demo environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5508	Task	Closed	—	Merge the LOPS 1.1.1.0 (M6) branch into LOPS 1.1.2.0 (M7)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5507	Tweak	Verified	Vasilii Sevriugin	ARM transaction missing "lops.filter.assaycode" after M6 merge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5505	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 19 (35)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5503	Sub-task	Closed	Alex Pakhunov	Script (submit_seq_run_complete_message.py) doesn't post request to pipeline	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5502	Sub-task	Closed	Alex Pakhunov	Failed to update transaction status from Scheduled to InProcess	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5500	Defect	Closed	Michael Livingston	Calculated values disappear after "Save" button is clicked in Array Zone Data Entry.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5493	Task	Closed	Ariel Jirau	K8S: Assay requests are not processed due to decryption issue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5470	Task	Closed	Ron Enson	Re-export RunLogConfigPolicy with export script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5459	Task	Closed	—	LOPS 1.1.1.0 automated testing: Platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5458	Task	Closed	—	LOPS 1.1.1.0 automated testing: WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5446	Sub-task	Closed	Klead Fusha	Perform Wes On X verifications	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5444	Defect	Closed	Ize Imai	Errors when generating End Repair worklists	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5420	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS - additional RefDataCatalog updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5411	Story	Verified	Monish Grover	Creation of cfDNA controls in LOPS and plate layout update for cfDNA downstream steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5403	Tweak	Verified	Ize Imai	Update sgNIPT Verso Retrieve DestPosition Query for Row Major Orientation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5379	Tweak	Verified	Vasiliy Kumaev	Rack to plate transfer for cfDNA LibPrep End Repair runlog parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5377	Story	Verified	Leonid Garin	SampleExtractionRunDataProcessor code update for cfDNA Extraction Runlog Processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5375	Task	Closed	Mehmet Ali Eken	Create Spring Profiles for PSPC Environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5371	Defect	Closed	Klead Fusha	Transfer cannot be completed for sgNIPt cfDNA LibAmp Pur to PostLib Quant TM	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5369	Tweak	Verified	Vasilii Sevriugin	Update sgNIPT SequenceRunCompleteEvent classes to allow LOPS-owned param naming	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5361	Task	Closed	Swati Giri	LOPS 1.1.10 (M6) Deployment - g64e2e-01 env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5352	Story	Verified	Ize Imai	LOPS Standalone Sample worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5344	Task	Closed	—	Run regression for G64 merge to Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5319	Story	Verified	Leonid Garin	Update ReTriggerPipe sql query to search for the old and new attribute types for assayRequestDependencies	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5293	Tweak	Closed	Krishna Tanuku	Update AM - sgNIPT cfDNA Library EDTA node title	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5283	Defect	Closed	—	Primer Design assay request message is not being processed successfully	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5271	Story	Verified	Ize Imai	Update/create user role to have access to "Mix Consumable" button	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5255	Defect	Verified	Krishna Tanuku	sgNIPT cfDNA Sequencing Run array method params type should be = Standard, not Raw Value	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5210	Story	Verified	Vasilii Sevriugin	Add integration with Cloud Config to support S3 Client configuration	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5200	Story	Verified	Sri Gorantla	Additional validation for slide pooling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5181	Story	Closed	Klead Fusha	Configure NtrWorklistGeneratorTask to differentiate Quant and Post-Quant steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5153	Story	Verified	Krishna Tanuku	cfDNA Group Test method reorganization and Assay Template update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5108	Story	Closed	Mikhail Makarin	Process post-extraction assay request for ASSAY-00057 (tfmrd-methyl-w-tracer-au-v1)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4999	Task	Closed	Ron Enson	Re-export the maint element and the pages so samples do not inherit duplicated fields	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4957	Story	Verified	Kevin Detweiler	WES: Disposal for Sample in Blood Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4904	Story	Verified	Vasiliy Kumaev	Illumina NGS - Assay QC UI (1 of 3 - General, RunResults)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4863	Task	Closed	Brandon Culver	Investigate cfDNA Rework Scenario Handling	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4855	Defect	Verified	Ray Ward	User friendly message should be displayed when system shall prevent boxes with duplicate barcodes from being created.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4784	Defect	Closed	Meghana Joshi	Child sample is not visible in unfiltered search (using Magnifier Button) in "Samples - Manage" tramstop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4601	Task	Closed	Ariel Jirau	Configure Gitlab repositories permission to ensure alignment with gitlab self-service deployment guidelines	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4580	Tweak	Verified	Sri Gorantla	Hide Buttons from All Users	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4570	Story	Verified	Lev Evstratov	The system must support Plate to Rack arraytransfermethods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4040	Story	Verified	Vadim Gusev	Add processor of Alg Pipeline pipeline-result message (Alg Pipe Result 1 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3983	Task	Closed	Mehmet Ali Eken	Update LOPS Prod Display Name and Make Java Memory Configurable from Config Server	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3936	Task	Closed	—	QC Review Page - Policy and Task Based - replace array_qc_review.js	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3885	Tweak	Verified	Hani Yakan	Update "By Tissue Batch" to "By Batch"	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3801	Story	Verified	Michael Livingston	gDNA downstream assay template updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3783	Story	Verified	Lev Evstratov	Copy action for transfer array action and sample template use for aliquot/derivative/pool sample creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3562	Task	Closed	Alex Pakhunov	Trigger methylation assay pipeline via REST API - Task	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3418	Story	Verified	Kevin Detweiler	Add assay info to sample list page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3135	Story	Verified	Ize Imai	Make Container Type Visible during use of Array Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2772	Story	Verified	Vadim Gusev	sgNIPT Algorithm- Implement ability to process metric output file (Alg Pipe Result 2 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2771	Story	Verified	Vadim Gusev	sgNIPT Algorithm - Assay Disposition Handling in the Pipeline Results processing (Alg Pipe Result 3 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2727	Story	Verified	Vadim Gusev	Handle Pipe Job Errors	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2649	Story	Closed	—	Test cfDNA Downstream assay rework points	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-1651	Story	Verified	Leonid Garin	The system shall have the the ability to process the SamLog Kafka message and the required data will be captured in the	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)

LOPS Sprint 20250113 (34) (75 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8657	Story	Opened	Kevin Detweiler	CLONE - WES: Create Blood Racks	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5471	Task	Closed	Gianna Bell-Eunice	Deploy latest sgNIPT release into Sandbox environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5457	Task	Closed	—	LOPS 1.1.1.0 automated testing: WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5449	Task	Closed	—	Provide Report for WGS Matching Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5439	Defect	Closed	Brad Garrett	WGS Download consolidation worklist triggers an error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5434	Story	Closed	Ron Enson	Array Parameter Updates for Hybrid Capture	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5422	Task	Closed	Alex Pakhunov	DevTools: support multiple genes for lrPCR seq array	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5421	Task	Closed	Alex Pakhunov	DevTools: automatically create HybCap seq array for lrPCR	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5412	Defect	Verified	Gianna Bell-Eunice	"AM - sgNIPT gDNA Pre-Extraction - 1" Policy node has Sample configuration.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5409	Task	Closed	Kersha Eddy	Upload example JSON for Second Bead Addition + Library Prep Workflow Steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5408	Task	Closed	—	Upload example JSON for Methylation Workflow Steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5381	Defect	Verified	Gianna Bell-Eunice	"sgNIPT cfDNA Library Amplification" Worklist can be generated for 3 plates.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5355	Story	Verified	Gianna Bell-Eunice	Update node name TM (Rack) - sgNIPT gDNA Pre-Extraction - 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5347	Defect	Verified	Olawale Dada	Array transfer method "sgNIPt cfDNA LibAmp Pur to PostLib Quant array" cannot be completed.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5345	Story	Verified	Gianna Bell-Eunice	Addition of concentration parameter to LPCR pool	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5342	Defect	Closed	—	Wes On X: Capture QC Review: Reject - Error when rerunning pools from Histo & BE	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5341	Task	Closed	Klead Fusha	Test-only: WGS library re-quant button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5340	Story	Closed	—	Test only - Inline-QC for Sequencing Steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5336	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 18 (34)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5334	Story	Verified	Monish Grover	Update array layout for HBA and CFTR to Add standard	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5329	Tweak	Closed	Isaac Vargas	Import reagent types into LOPS repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5327	Task	Closed	Klead Fusha	LOPS production deployment - Version 1.1.0.1 (Hotfix 6)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5317	Story	Verified	Monish Grover	cfDNA library prep updates - CF Negative control zone addition, sample type updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5316	Defect	Closed	Swati Giri	Wes On X - WesDeparaffinization QC Batch Edit page can't be rendered	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5315	Story	Closed	Mai Ton-Nu	tfMRD Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5310	Story	Verified	Gianna Bell-Eunice	Update param type for gDNA Sequencing Run array method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5301	Tweak	Verified	Michael Livingston	Create DFD for import of Primer plate maps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5294	Task	Closed	Jonathan Quinn	JQ - Design and support tasks (Sprint 7)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5290	Task	Closed	Alex Pakhunov	Tool/script(s) to create LR-PCR and Hybrid Capture sequencing arrays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5289	Story	Verified	Mikhail Makarin	PacPbio LRPCR - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete mess	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5285	Task	Closed	Mikhail Makarin	Update CODEOWNERS permissions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5281	Task	Closed	Mikhail Makarin	Upload Previous Version of OverOps for Web Containers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5257	Task	Closed	Vasilii Sevriugin	Update unit tests to reflect changes for SamRep Kafka and API contracts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5253	Defect	Verified	Gianna Bell-Eunice	Duplicated sgNIPT cfDNA Sequencing Run/sgNIPT cfDNA Sequence Run array methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5251	Sub-task	Closed	Vasilii Sevriugin	keh_lops user needs READ permissions for events.pipeline.workflow.result.v2	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5247	Task	Reopened	Leonid Garin	Investigate. Remove or mask PHI/PII information from LOPS logs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5219	Defect	Closed	—	Incorrect Source Array Type for sgNIPT cfDNA LibAmp to PostLib Quant Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5130	Tweak	Verified	Sri Gorantla	Sample List Page: Group/Order WES Menus	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5129	Tweak	Verified	Sri Gorantla	Plate List Page: Group/Order WES Menus	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5110	Defect	Verified	Lev Evstratov	Error Message when selecting 'Grid with Params for Reagent IQC' view in Data Entry grid	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5107	Story	Verified	Kevin Detweiler	WES: Create Blood Racks	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5062	Defect	Closed	Ize Imai	ExceptionCodeList page not displaying correctly for BloodExtractionSampleResultReview and QCREviewFailedSamples task de	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5056	Defect	Closed	Brad Garrett	RedoCalculations Action is overloading ToDoList	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5045	Story	Verified	Olawale Dada	Updates to LibAmp Pur to PostLib Quant transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5005	Story	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue 2 (batchId and gene)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4985	Story	Verified	Vasiliy Kumaev	Propagate Child Sample Barcode during auto Sample pooling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4965	Task	Closed	—	SQE Regression of sgNIPT After Big Merge	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4927	Story	Closed	Leonid Garin	SamRep update exclusions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4896	Story	Verified	Mikhail Makarin	Save patient source sample to the assay when processing assay requests on derivative samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4883	Task	Closed	Meghana Joshi	Merge LOPS-G64-Launch back into Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4816	Tweak	Verified	Lev Evstratov	Update QCBatchItemLookup to display 'Request ID'	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4814	Story	Verified	Leonid Garin	Update Assay Request message processing to parse assayRequestDependencies from requestParams section of new schema versi	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4798	Story	Verified	Monish Grover	Support display of exception codes relevant to sgNIPT Assays in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4782	Story	Closed	Brad Garrett	Process tissue filler samples for WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4781	Story	Closed	Brad Garrett	Process blood filler samples for WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4780	Task	Closed	Alex Pakhunov	Run a script to trigger updates for existing reagent lots with San Carlos department in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4749	Defect	Closed	Meghana Joshi	"Fail Assay" button should not work for Assay having "Initial" Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4746	Story	Verified	Ize Imai	Consolidate Assay QC buttons on the Array and Historical Array List pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4677	Story	Verified	Michael Livingston	Updates to PostLib Quant specfications Master Data updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4667	Story	Verified	Gianna Bell-Eunice	gDNA Pre-extraction and Extraction worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4588	Tweak	Closed	Mikhail Makarin	Determine Long Term Solution for LOPS-4190. Create a default user with base department	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3911	Story	Verified	Monish Grover	Updates for sgNIPT Algorithm assay (Dry Lab Only) - Array method, and array layout	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3758	Story	Closed	Kevin Detweiler	Capture QC Review: Support QC Report	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3757	Story	Closed	Kevin Detweiler	Library QC Review: Support QC Report	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3746	Story	Verified	Vasiliy Kumaev	Build Plasma Isolation instrument Runlog Processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3672	Story	Closed	Kevin Detweiler	Extraction QC Review: Support QC Report	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3531	Story	Verified	Leonid Garin	Have the ability to record pipeline outputs (file paths) from pipeline result (HC, Alg)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3292	Story	Closed	Swati Giri	WES: Blood Extraction Re-Run: Display 'Blood Extraction Run Number' for Blood Samples Queued for Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2728	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Assay Disposition Handling in the Pipeline Results processing (HC Pipe Result 3 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2657	Task	Closed	Vadim Gusev	Implement access to s3 data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2506	Story	Verified	Vadim Gusev	NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, excluding controls)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2470	Story	Verified	Vasiliy Kumaev	LOPS Verso Pick/Retrieve worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2230	Story	Verified	Meghana Joshi	Create validation for single-use flow cells	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-1760	Task	Closed	Mikhail Makarin	Get new schema in Repository (POJO, JSON Schema, Etc)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-1535	Story	Verified	Vadim Gusev	Add processor of Hybrid Capture Pipeline pipeline-result message (HC Pipe Result 1 of 3)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 9 (25) (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3839	Task	Closed	Kathy Dao	Investigation into samples from completed QC batches option	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3836	Story	Closed	Laura Dietrick	Updates for sample type gDNA	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3835	Task	Closed	Jonathan Quinn	Add unit conversions, create pM (picomolar) and nM (nanomolar) units	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3739	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 9 (25)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3698	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (25)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3695	Task	Closed	Kathy Dao	sgNIPT gDNA Extraction Demo Preparation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2722	Story	Verified	Jonathan Quinn	Library Amplification Purification Array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2712	Story	Verified	Jonathan Quinn	Capture wash/amp/purification (Day 2) array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2653	Story	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (24)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2596	Story	Verified	Jonathan Quinn	Library Amplification Purification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2594	Story	Verified	Monish Grover	Capture wash/Amp/Pool Purification (Day 2) array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2593	Story	Verified	Jonathan Quinn	Pooling/Hybridization (Day 1) array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2590	Story	Verified	Laura Dietrick	cfDNA Library Prep group test method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2433	Story	Verified	Monish Grover	Capture Wash/Amplification (Day 2) test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2432	Story	Verified	Krishna Tanuku	Pooling/Hybridization (Day 1) test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2425	Story	Verified	Laura Dietrick	PostLib Quantification array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2416	Story	Verified	Laura Dietrick	Library amplification purification test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 8 (24) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3619	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 8 (24)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3618	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 8 (24)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3378	Story	Verified	Kathy Dao	sgNIPT Plasma Master Data Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2664	Story	Verified	Krishna Tanuku	Updates to Isolation Assay Template - add group and standard test methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2595	Story	Verified	Jonathan Quinn	Post ligation purification array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2539	Story	Verified	Kathy Dao	sgNIPT Plasma Process group test method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2430	Story	Verified	Jonathan Quinn	Library Amplification array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2426	Story	Verified	Monish Grover	Post Library Quantification test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2275	Story	Closed	Kathy Dao	KD Ticket Design work - Sprint 8 (24)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 7 (23) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3344	Tweak	Verified	Laura Dietrick	Update external IDs for cfDNA, gDNA, Plasma sample types in sgNIPT Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3302	Task	Closed	Kathy Dao	Plasma Demo Prep Sprint 7 (23)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2725	Story	Verified	Jonathan Quinn	gDNA Extraction to Quant Array Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2721	Story	Verified	Krishna Tanuku	gDNA Quant Array Master Data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2720	Story	Verified	Jonathan Quinn	gDNA Extraction Array Master Data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2582	Story	Verified	Monish Grover	Library amplification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2581	Story	Verified	Jonathan Quinn	Post ligation purification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2542	Story	Verified	Jonathan Quinn	LibPrep End Repair, A-tailing, Ligation, EDTA addition array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2540	Story	Verified	Krishna Tanuku	gDNA downstream assay template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2418	Story	Verified	Monish Grover	cfDNA downstream assay template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2415	Story	Verified	Monish Grover	Library amplification test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2414	Story	Verified	Monish Grover	Post ligation purification test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2360	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 7 (23)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2357	Story	Verified	Laura Dietrick	SDI Group Test Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 6 (22) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3303	Task	Closed	Kathy Dao	Plasma/Reagent Mix Demo Prep (22)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2723	Story	Verified	Jonathan Quinn	gDNA PEXT to EXT Array Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2663	Story	Verified	Jonathan Quinn	gDNA Normalization test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2565	Story	Verified	Laura Dietrick	gDNA Extraction Process group test method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2493	Story	Verified	Laura Dietrick	gDNA Pre-extraction array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2465	Story	Verified	Monish Grover	gDNA Extraction Quant test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2359	Task	Closed	Kathy Dao	KD ticket design - Sprint 6 (22)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2358	Story	Verified	Kathy Dao	LibPrep End Repair, A Tailing, Ligation and EDTA test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 5 (21) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2933	Story	Verified	Monish Grover	Plasma Isolation Manual Recovery Test Method and ParameterList	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2661	Story	Verified	Kathy Dao	Updates to parameter list for gDNA pre-extraction test method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2651	Story	Verified	Jonathan Quinn	cfDNA Extraction QC Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2579	Story	Verified	Jonathan Quinn	gDNA Extraction test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2562	Story	Verified	Krishna Tanuku	gDNA Pre-extraction reagents	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2527	Story	Verified	Laura Dietrick	Child plasma sample template (for cfDNA extraction)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2417	Task	Closed	Kathy Dao	Spike Task for Library Prep SLIB1 Design	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2388	Story	Verified	Laura Dietrick	Isolation child plasma test method and parameter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2277	Story	Verified	Jonathan Quinn	cfDNA extraction test method and parameter list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 4 (20) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2929	Task	Closed	Kathy Dao	sgNIPT Support, Design, WOW Organization Sprint 4	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2908	Task	Closed	Jonathan Quinn	Remove Austin from Site on gDNA sample template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2647	Story	Verified	Laura Dietrick	sgNIPT Blood Process Group Test Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 3 (19) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2849	Task	Closed	Kathy Dao	sgNIPT Support, Design, WOW Organization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2626	Story	Closed	—	Child gDNA sample template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2577	Story	Verified	Laura Dietrick	Child cfDNA sample template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2454	Story	Verified	Jonathan Quinn	ParamList addition to sgNIPTIsolation Test Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 2 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2464	Story	Verified	Jonathan Quinn	gDNA Pre-extraction test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2276	Story	Verified	Laura Dietrick	Isolation QC Method configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 16 (32) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5163	Defect	Verified	Kathy Dao	Test Method sgNIPT Plasma Manual Process‎ is not configured properly.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5146	Task	Closed	—	Revert basedepartment field on admin Sysuser to null	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5133	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 16 (32)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5106	Task	Closed	—	Investigation into cfDNA pool quantification calculation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5076	Defect	Verified	Monish Grover	sgNIPT gDNA Extraction Quantification parameter's values are not calculated.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5043	Defect	Closed	Gianna Bell-Eunice	Plasma Isolation processing fails for Re-run and Manual Isolation Evaluation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5011	Tweak	Verified	Monish Grover	sgNIPT gDNA Sequencing Run array method is missing parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4983	Task	Closed	Kathy Dao	Update/check calculations gsheet for sgNIPT processes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4980	Story	Verified	Gianna Bell-Eunice	gDNA Sequencing Prep final loading dilution array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4743	Story	Verified	Laura Dietrick	Isolation assay template updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3956	Story	Verified	Krishna Tanuku	cfDNA downstream assay template updates - add remaining test methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3913	Story	Verified	Monish Grover	Updates to cfDNA PostLig Purification step - add/remove transfer methods, etc	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2578	Story	Verified	Monish Grover	Updates for gDNA Extraction Quantification specification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 15 (31) (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5027	Defect	Closed	—	Unable to promote results for sgNIPT cfDNA Library Prep A-Tailing array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5026	Defect	Verified	Kathy Dao	Incorrect control layout for cfDNA Library Prep and cfDNA LibAmp Purification array layouts	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5003	Story	Verified	Monish Grover	cfDNA Library Prep End Repair parameter list Update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5002	Story	Verified	Michael Livingston	gDNA Library Prep Group Test Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4990	Tweak	Verified	Laura Dietrick	Import sgNIPT reagents into the repository Part 2	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4979	Story	Verified	Olawale Dada	gDNA Sequencing Prep final loading dilution test method and param list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4970	Story	Verified	Monish Grover	gDNA Sequencing Prep Array Transfer Methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4943	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 15 (31)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4893	Story	Verified	Gianna Bell-Eunice	PL/SPEC Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4876	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 31)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4865	Story	Verified	Olawale Dada	LR-PCR Pool Purification Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4864	Story	Verified	Olawale Dada	gDNA array transfer method updates: Pool Tapestation Quant and Library Prep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4800	Story	Verified	Krishna Tanuku	gDNA Sequencing array transfer method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4799	Story	Verified	Olawale Dada	cfDNA sequencing run complete test method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4789	Story	Verified	Krishna Tanuku	Associate sgNIPT cfDNA Capture/Hybridization TMs with sgNIPT cfDNA Capture/Hybridization array methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4744	Story	Verified	Olawale Dada	Plasma Isolation TM and QC Method updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4674	Story	Verified	Kathy Dao	cfDNA library prep updates - Positive, negative control position updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4557	Story	Verified	Olawale Dada	Update Plasma Isolation and Manual Isolation Sample Template and Group Test Methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4195	Tweak	Verified	Krishna Tanuku	Remove hidden, newline character from Assay Template fields	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4083	Story	Verified	Michael Livingston	gDNA LR-PCR Primer plate setup (HBB)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2797	Story	Verified	Olawale Dada	LR-PCR Quantification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2755	Story	Verified	Krishna Tanuku	gDNA LR-PCR array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2438	Story	Verified	Olawale Dada	gDNA Sequencing Prep array methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 14 (30) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4871	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 14 (30)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4818	Defect	Verified	Kathy Dao	Partial Plasma Isolation parameters don't show the calculation value.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4817	Defect	Verified	Kathy Dao	sgNIPT Plasma Manual Isolation/RunData PL is not populating.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4812	Task	Closed	Laura Dietrick	Support of PSPC Milestone 2 testing (Sprint 30)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4786	Task	Closed	Kathy Dao	Reagent part number identification for cfDNA master MM-00004- MM0021mix recipes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4747	Story	Verified	Laura Dietrick	Update calculation for gDNA Pool tapestation to be on quant plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4742	Story	Verified	Gianna Bell-Eunice	Updates to ER, A-tailing, and ligation array methods (Master Mix updates)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4737	Story	Verified	Laura Dietrick	Create new child cfDNA sample template and add container type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4111	Story	Verified	Laura Dietrick	gDNA Pool Tapestation Quantification array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3889	Story	Verified	Gianna Bell-Eunice	cfDNA Master Mix part number set up (MM0001-MM0003)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2754	Story	Verified	Krishna Tanuku	Pool quantification Array Method and Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2744	Story	Verified	Keith Ngolley [X]	Sequencing Prep Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2738	Story	Verified	Krishna Tanuku	gDNA Final loading dilution array method (gDNA Sequence Pool Dilution)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2695	Story	Verified	Gianna Bell-Eunice	Sequencing Run Complete message Master Data (gDNA)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2623	Story	Verified	Gianna Bell-Eunice	Updates for plasma manual isolation, partial isolation/norm	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 13 (29) (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4785	Task	Closed	Brandon Culver	Update sgNIPt Parameter List File Names in Repository	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4727	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 13 (29)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4706	Tweak	Verified	Laura Dietrick	Update Assay template AT-00020 to include "required to complete assay" flags	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4676	Story	Verified	Gianna Bell-Eunice	Remove cfDNA Library Quantification step from HybCap Group test method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4671	Story	Verified	Gianna Bell-Eunice	Update gDNA Final Loading Dilution Test Method and Parameter List names to gDNA Sequence Pool Dilution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4652	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 29)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4222	Task	Closed	—	Create a manual test script for sgNIPT gDNA Normalization	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4220	Task	Closed	—	Create a manual test script for sgNIPT gDNA Extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4219	Task	Closed	—	Create a manual test script for Perform sgNIPT gDNA Pre-Extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4218	Task	Closed	—	Create a manual test script for Perform sgNIPT cfDNA Extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4217	Task	Closed	—	Create a manual test script for Perform sgNIPT Plasma Isolation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4161	Defect	Verified	—	Transfer method sgNIPT cfDNA Capture to Pool Quant cannot be performed due to Level Zone naming conflict	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4125	Story	Verified	Olawale Dada	gDNA SDI Group Test Method (LR-PCR Barcoding)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4057	Task	Closed	Kathy Dao	Reagent part number identification for cfDNA master mix recipes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3977	Story	Verified	Gianna Bell-Eunice	Nuclease treatment array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2796	Story	Verified	Monish Grover	LR-PCR Quantification array transfer methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2625	Story	Verified	Laura Dietrick	LR-PCR Pooling Array Transfer Methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2599	Story	Verified	Laura Dietrick	gDNA Repair, A-tailing, Adapter Ligation array methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2575	Story	Verified	Keith Ngolley [X]	cfDNA Barcode Primer Plate plate maps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2563	Story	Verified	Olawale Dada	gDNA Final Loading Dilution Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 12 (28) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4650	Task	Closed	Laura Dietrick	LD - Support of PSPC Milestone 2 testing (Sprint 28)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4626	Task	Closed	Monish Grover	Deploy release to sgNIPT Integration environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4593	Defect	Closed	—	"sgNIPT gDNA Library Prep": Test result for the "No" value is not populating	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4235	Sub-task	Closed	—	sgNIPT gDNA Normalization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4234	Sub-task	Closed	—	sgNIPT gDNA Extraction Quantification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4227	Story	Verified	—	Create testcases with sgNIPT Assay-00041 Happy Path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4215	Task	Closed	—	Create a manual test script for Submit Sample and Assign Assay	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4212	Task	Closed	—	Create a manual test script for Creating Racks	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4206	Task	Closed	—	Create lots for testing of reagent validation api	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4202	Task	Closed	—	Create a manual test script for Receiving a consumable lot	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4173	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 12 (28)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4099	Task	Closed	Olawale Dada	Import sgNIPT reagents into the repository	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4084	Task	Closed	Kathy Dao	SPIKE: Investigation into gDNA LR-PCR quant pooling calculation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3976	Story	Verified	Gianna Bell-Eunice	Nuclease treatment test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2665	Story	Verified	Laura Dietrick	LR-PCR Pooling Array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2605	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2598	Story	Verified	Gianna Bell-Eunice	gDNA Repair/A-tailing, adapter ligation test methods and parameter lists	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2564	Story	Verified	Kathy Dao	gDNA Library Prep initial transfer method (pool to well)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2434	Story	Verified	Monish Grover	gDNA Pool Tapestation Quantification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 11 (27) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4165	Task	Closed	Monish Grover	Spike Task: Calculation for samples, controls, Standards belonging in two different plates that is combined into 1 Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4081	Tweak	Verified	Olawale Dada	Updates to Pooling/Hyb (Day 1) array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4072	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 11 (27)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4064	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 11 (27)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4056	Story	Verified	Olawale Dada	Updates for LR-PCR Pooling test method and parameter list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3974	Task	Closed	Kathy Dao	sgNIPT User Guide updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3912	Story	Verified	Laura Dietrick	cfDNA library prep updates - control/array layout update,	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2997	Story	Verified	Jonathan Quinn	Pooling/Hyb (Day 1) Array Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2692	Story	Verified	Laura Dietrick	Sequencing Run Complete message Master Data (cfDNA)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2584	Story	Verified	Krishna Tanuku	gDNA LR-PCR Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2580	Story	Verified	Monish Grover	gDNA LR-PCR Quantification Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2436	Story	Verified	Monish Grover	Pool Dilution Array Method and Transfer Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2315	Story	Verified	Laura Dietrick	Create Dry Lab only assay template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

sgNIPT Sprint 10 (26) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4044	Task	Closed	Krishna Tanuku	SPIKE: Investigation into supporting multiple unknowns in quant steps (gDNA Ext Quant and cfDNA Pool Quant)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4012	Task	Closed	Monish Grover	SPIKE: Investigation into LR-PCR Pooling Array Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3951	Story	Verified	Jonathan Quinn	Create new array layout for Array method sgNIPT cfDNA LibAmp Purification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3910	Task	Closed	Jonathan Quinn	JQ Ticket Design - Sprint 10 (26)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3909	Task	Closed	Kathy Dao	KD Ticket Design - Sprint 10 (26)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3887	Story	Verified	Jonathan Quinn	Updates for cfDNA Library Prep Quantification - add specification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3838	Task	Closed	Kathy Dao	Investigation into carryover of plasma volume from parent sample to support partial isolation/normalization	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3832	Story	Verified	Kathy Dao	Update Master data for gDNA Extraction Demo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3469	Story	Verified	Monish Grover	cfDNA downstream assay template updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2592	Story	Verified	Laura Dietrick	LR-PCR Pooling Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2591	Story	Verified	Krishna Tanuku	cfDNA Hybrid Capture group test method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2437	Story	Verified	Laura Dietrick	cfDNA Pool Dilution Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2435	Story	Verified	Jonathan Quinn	Pool Quantification Test Method and Parameter List	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2428	Story	Verified	Monish Grover	cfDNA Post Library Quantification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

sgNIPT Sprint 1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2380	Story	Verified	Jonathan Quinn	Iso/Ext Assay Template configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-2263	Story	Verified	Jonathan Quinn	Isolation test method and param list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

WESonX Sprint 32 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5209	Task	Closed	Kevin Detweiler	Update intf_lops_user to enable Force Update flag	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-4851	Story	Closed	Kevin Detweiler	Associate 'Candidate for Tissue Re-Work' from 'Tissue Block' on 'Tissue Extraction Sample'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4666	Defect	Closed	Swati Giri	Wes On X: Capture QC Review: Reject - QC Failed Pool samples have WESCaptureQuantWorkflow TM in InProgress status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4115	Story	Closed	Kevin Detweiler	Capture QC Review: Update 'Plate-Level Pool QC'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

WESonX Sprint 31 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5020	Story	Closed	Kevin Detweiler	WES: Access for Lab Ops User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5019	Story	Closed	Kevin Detweiler	WES: Access for Extraction User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 30 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4868	Task	Closed	Mai Ton-Nu	Update NR0701 reagent type in repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4692	Defect	Closed	Mai Ton-Nu	Wes On X: Capture Quant Task - Add unit for concentrations and update field labels	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

WESonX Sprint 29 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4773	Task	Closed	—	WES: Support Manual Re-Run for Library Prep Plate from Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4771	Task	Closed	—	Run regression testing for M3 build (Wes on X)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4736	Task	Closed	Swati Giri	Investigation: WES-LOPS: QC batch will not complete tube verification.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4691	Defect	Closed	Michael Livingston	Wes On X: Capture QC Reruns - Tissue sample incidents are missing Department value	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4185	Task	Closed	—	LOPS Maintenance 1 - WES-X sandbox deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 28 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4713	Defect	Verified	Ron Enson	Wes On X: Capture Quant QC Review - 'Capture QC Review' button triggers 'Capture Quant' action (Internal Defect)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4696	Task	Closed	Kevin Detweiler	WES on X: Investigate Rack-to-Plate Error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4690	Defect	Closed	Justin Jones	Incorrect sequencer serial number set-up in the production LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4687	Task	Closed	—	Run regression for M2 - Implementation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4686	Task	Closed	—	Run regression for hotfix2 - Implementation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4595	Defect	Closed	Kevin Detweiler	[SIG AU WES-X] Exception in LOPS did not generate TNP in LIMS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4548	Task	Closed	Kevin Detweiler	[SIG AU WES-X] Error trying to push Record Rundata Entered for Fragmentation step.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4547	Task	Closed	Sviatoslav Pastukhov	LOPS Maintenance 1 - WES PSPC environment deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4542	Task	Closed	Matt Smith	WES-X Case 40300817.1-1-HNE Needs to move from In progress to Cancelled in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4214	Task	Closed	Mai Ton-Nu	Assessment of WES-X sample staging automation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3968	Story	Closed	Meghana Joshi	Assay QC Review: Exclude SAMPLE from POOL Re-Run starting from Blood Extraction/Histopathology (Test-Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 27 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4225	Defect	Verified	Kevin Detweiler	Hard-coded schema in the isQCBatchEquipmentOk method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4189	Defect	Verified	Meghana Joshi	Capture QC Review Blocked because page is NOT available on Post-Launch Build (Internal Defect)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4164	Defect	Verified	Kevin Detweiler	Blood Samples sent for re-run from 'Capture QC Review' not included in BE Worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4086	Defect	Verified	Swati Giri	Capture QC Review: WesCaptureConcentrationTask Update Variables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4079	Defect	Verified	Swati Giri	Wes On X: Tissue Extraction + Library QC Review - Exception samples sample and assay status is InProgress instead of Com	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4050	Task	Closed	Swati Giri	WES: Capture QC Review: WesCaptureConcentrationTask Roll back step 15	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3941	Sub-task	Closed	Meghana Joshi	Update action to allow promote array results to samples with mandatory params	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3689	Story	Verified	Swati Giri	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3650	Story	Verified	Mikhail Makarin	WES: Capture QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 26 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4110	Defect	Verified	Kevin Detweiler	"Not a Valid Instrument" error when user try to select an instrument in WESSequencingRunDetails	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4108	Task	Closed	Swati Giri	Deploy the WesX Launch Branch to the PSPC gspintegration01 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4027	Task	Closed	Swati Giri	Samples for Histopathology user practice: Week of 9/30/2024	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4016	Story	Verified	Kevin Detweiler	Addition of a "Received Samples" filter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3973	Story	Verified	—	Assay QC Review: Maintain SAMPLE in POOL Re-Run starting from Hybrid Capture/Sequencing Prep (Test-Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3972	Defect	Verified	Ron Enson	Wes on X: Sequencing Prep - Flow Cell is double captured in WESSequencingRunDetails TM	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3971	Defect	Verified	Meghana Joshi	Wes on X: Capture PCR Cleanup - Intermittent rundata processing error (Failed to create rset for Sample..)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3955	Defect	Verified	Lev Evstratov	Wes On X: Pre-Capture Pooling - Error while processing Pre-Capture Pooling rundata file	team: null
LOPS-3898	Defect	Closed	Lev Evstratov	Wes On X - HYB1 plate remains in Loaded state, filter for Hybridization step will not yield it	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3862	Task	Closed	—	Finalize User List for Production - Reagents and Equipment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3772	Task	Closed	Gianna Bell-Eunice	Document the WES-X test sample creation procedure	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3717	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood/Tissue Sample from 'Hybrid Capture' Workflow to 'Sequencing Prep' Workflow (Test-Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3688	Story	Closed	Swati Giri	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3687	Story	Closed	Swati Giri	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3649	Story	Closed	Meghana Joshi	WES: Library QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histopath	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3249	Story	Closed	Meghana Joshi	WES: Extraction QC Review: Update Test Methods and Set Approval for Re-Run Samples Scheduled for Blood Extraction/Histop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 25 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3900	Defect	Closed	Lev Evstratov	Wes On X - TDNA plate remains in Loaded state, filter for Quant Plating step will not yield it	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3886	Defect	Closed	Ron Enson	Wes On X: QC Batches - 'QC Batch Ready for Workflow Step' doesn't work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3873	Defect	Closed	Kevin Detweiler	Anomalous receive/unreceive/validation behavior in Histology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3863	Task	Closed	—	Finalize User List for Production - Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3854	Defect	Closed	Swati Giri	Save/Release doesn't complete the case	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3853	Task	Closed	Kevin Detweiler	Another set of extraction reagents for the E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3834	Defect	Verified	Swati Giri	Wes On X - Capture QC Review - WESSequencingRunWorkflow TMs should not be assigned after Capture QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3833	Tweak	Closed	Ron Enson	Wes On X - Capture Quant - Typo in validation message for re-entering concentration should be fixed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3824	Story	Closed	—	WES: Display Received Samples Ready for Tissue Extraction (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3800	Task	Closed	Mai Ton-Nu	WES-X workflow practice	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3749	Defect	Closed	Kevin Detweiler	Wes On X: Sequencing Prep - Stored transfer volume units are ul instead of uL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3748	Task	Closed	Kevin Detweiler	Samples for Histopathology user practice: Week of 9/16/2024	team: null
LOPS-3743	Task	Closed	—	Investigation of missing workitem during fragmentation (Item 18 on the e2E issues gSheet)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3741	Task	Closed	Kevin Detweiler	Additional extraction reagents for the E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3716	Story	Closed	Michael Livingston	Assay Cancellation Request: Tissue Sample from 'Tissue Extraction' Workflow to Tissue 'Library Prep' Workflow (Test-Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3703	Story	Closed	Gianna Bell-Eunice	Sequencing Prep: Update Transfer Volume Table	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3699	Tweak	Closed	Michael Livingston	Tissue Extraction: Update Test Method Names and Create New Group Test Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3646	Defect	Closed	Ron Enson	QC Batch List Page: Consolidate 'Racks Ready for Tube Verification' filter with 'QC Batch Ready for Workflow Step' filte	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3644	Defect	Closed	Ron Enson	Wes On X: Tissue Extraction - WesTubeToRack QC Batch status is Initial after Tube-to-Rack step is completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3641	Task	Closed	Swati Giri	LOPS 1.0.0.0 RC 4 deployment - PSPC environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3585	Defect	Closed	Olawale Dada	Boxes Page - Remove non-functional 'Tube Verification' button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3472	Defect	Closed	Meghana Joshi	Wes On X - Capture QC Review - TMs has incorrect statuses after Reject action using new Wes Actions - Capture QC Review	team: null
LOPS-3426	Story	Closed	Kevin Detweiler	Extraction/Library/Capture QC Review: Validate Cannot Re-Quant Plate after QC Review is Completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2350	Task	Closed	Mai Ton-Nu	Migrate Equipment Master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2334	Task	Closed	Jennifer Chen	Finalize User List for Production - Extractions, LabOps, BioDev, BioFx, DataScience, EPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1452	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood Sample from 'Blood Extraction' Workflow to 'Library Prep' Workflow (Test-Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 24 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4774	Task	Closed	—	Remove non-breaking spaces	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3788	Story	Closed	—	Assay QC Review: Sequencing Prep Pool Disposal (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3713	Task	Closed	—	Run Hybrid Capture WF Happy path with sample cancellation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3712	Task	Closed	—	Run Blood WF Happy path with sample cancellation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3710	Task	Closed	—	Run Tissue WF Happy path with sample cancellation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3685	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Failed TDNA plate samples are not rejected	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3667	Defect	Closed	Hani Yakan	Wes On X: Tissue Extraction - 'QC Batch Ready for Workflow Step' filter doesn't display QC Batches ready for Tube-to-Rac	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3661	Task	Closed	Michael Livingston	Check reagent class for controls in repo to make sure it doesn't overwrite master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3658	Task	Closed	Jose Valdivieso	Samples for Histopathology user practice: Week of 9/2/2024	team: null
LOPS-3640	Defect	Closed	—	LOPS worklist unable to be utilized by Biomek	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3638	Sub-task	Closed	Kevin Detweiler	TM > WES Blood Extraction incorrectly returns Blood Filler samples along with Whole Blood Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3634	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Error generating Normalization worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3633	Defect	Closed	Michael Livingston	Wes On X: Tissue Extraction - Completing TDNA plate QC Review doesn't complete WesExtrQuantResult TM	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3616	Task	Closed	Kevin Detweiler	Additional reagent creation in the E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3580	Tweak	Closed	Gianna Bell-Eunice	Display Container barcodes for selected consumables in Run Details: Consumable Chooser Dialog	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3578	Tweak	Closed	Gianna Bell-Eunice	Display Container barcodes for selected consumables in QC Batch Details Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3574	Defect	Closed	Kevin Detweiler	Wes On X: Sequencing Prep - Blood and Tissue pool transfer volumes are not stored	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3571	Task	Closed	Gianna Bell-Eunice	Samples for Histopathology user practice: Week of 8/26/2024	team: null
LOPS-3567	Tweak	Closed	Olawale Dada	Plate List View > Support 'WES Actions' Menu	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3566	Defect	Closed	Valeria Vargas	Wes On X: Tissue Extraction - Error when running Tube Verification step (Required String 'qcmethodversionid' is null or	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3565	Defect	Closed	Kevin Detweiler	Wes On X - 'Samples Ready For Workflow Step' filter can't be used to display patient blood samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3547	Task	Closed	Liubomyr Skorokhod	PSPC automation updates - LOPS 1.0.0.0 RC 3	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3517	Story	Closed	Kevin Detweiler	Sequencing Prep: Remove 2 Reagents	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3493	Story	Closed	Michael Livingston	Sequencing Prep: Update Transfer Volume Calculation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3491	Story	Closed	Swati Giri	Sequencing: Update Flowcell ID Validation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3488	Task	Closed	Olawale Dada	Remove non-breaking spaces	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3482	Story	Closed	Kevin Detweiler	Update Capture Quant Task	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3467	Defect	Closed	Swati Giri	Wes On X - Capture QC Review - Re-Quant - An error is displayed for completing review after Re-Quant plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3456	Story	Closed	Michael Livingston	Update child instruments to have a new instrument model	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3336	Story	Closed	Mikhail Makarin	Capture QC Review: Validate 'Capture QC Review' Menu Item is Selected	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3285	Story	Closed	Olawale Dada	Support Rare Blood Exceptions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3271	Defect	Closed	Michael Livingston	Parent instrument is available during selection of sequencer instrument	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3111	Story	Closed	Swati Giri	Create Normalization Worklist - Test with Canceled Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3104	Defect	Closed	Meghana Joshi	Wes On X - Capture Quant QC - Need to fix entering concentrations flow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2998	Tweak	Closed	Michael Livingston	WES: Standardize Group and Individual Test Methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2646	Story	Closed	Kevin Detweiler	Hybrid Capture Re-Run: Support Filler Samples - Test Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 23 (38 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3627	Task	Closed	Swati Giri	Manual Post pipeline kafka message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3509	Task	Closed	Swati Giri	Export Sequencing Instrument and Add to Repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3484	Defect	Closed	Valeria Vargas	Wes On X: Tissue Extraction - Error when running Tube-to-Rack step (Required String 'qcmethodversionid' is null or empty	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3468	Task	Closed	Brad Garrett	Missing sequencer part; incorrect part selected for E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3461	Task	Closed	Kevin Detweiler	Map step names between LV1 and LOPS for the IT analytics dashboard. Blood, Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3459	Defect	Closed	Swati Giri	Wes On X - Capture QC Review - ReQuant - An error is displayed for ReQuant with filler samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3454	Defect	Verified	Mikhail Terpugov	Uploading for Capture PCRCleanup Rundata throws error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3438	Defect	Closed	Michael Livingston	Wes On X: Library Prep - Worklist "Process Type" value is incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3420	Story	Closed	Michael Livingston	WES: Support 3-Character Format for Source Well across Worklists	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3417	Task	Closed	—	E2E Sample Staging: Additional Accessioning & Histology Test Scenarios	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3415	Defect	Closed	Lev Evstratov	Wes On X - Error creating a Sequence Manifest for a pool with fillers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3402	Defect	Closed	Mikhail Makarin	Capture QC Review - Number of patient samples include filler	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3398	Defect	Closed	Kevin Detweiler	Tissue Extraction Review Page doesn't display	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3383	Task	Closed	Swati Giri	Error uploading an extraction quant plating run data file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3382	Task	Closed	Kersha Eddy	Missing Kingfisher instrument in the E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3381	Defect	Verified	Meghana Joshi	Wes On X - Capture QC Review - Reject - An error is displayed for completing review after Reject plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3379	Task	Closed	Kevin Detweiler	LOPS/WES X UAT Preparation - Assay QC and rerun Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3370	Story	Closed	Meghana Joshi	Blood Extraction Results Review: Support 'Sample Status'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3361	Sub-task	Closed	—	Remove redundant "Sub Type" column from BERR table	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3321	Defect	Closed	Klead Fusha	WES on X: BERR - Fail & re-extract: missing 'samples to confirm list page' in the fail & re-extract workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3320	Defect	Closed	Klead Fusha	WES on X: BERR - Log exception & Fail assay: incorrect steps order in the log exception workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3253	Task	Closed	—	Not Including “Example/Test Data” During Install	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3251	Tweak	Closed	Kevin Detweiler	Reagent Barcode only visible to administrators	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3217	Tweak	Closed	Kevin Detweiler	Histopath - TM Descriptions in the Assay Template Updated to Match the TM Descriptions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3214	Story	Closed	Meghana Joshi	Update Sample Status to Completed for Re-Run Samples Scheduled for Blood Extraction/Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3186	Story	Closed	Kevin Detweiler	WES: Support Filter to Display WES Blood/Tissue Samples for 'Sample Receipt'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3132	Story	Closed	Swati Giri	Histopath - reconcile test method (Workitem Description)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3112	Story	Closed	Swati Giri	Create Pre-Capture Pooling Worklist - Test with Canceled Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3100	Tweak	Closed	Michael Livingston	Standardize 'Array Method' and 'Array Layout'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3035	Story	Closed	Monish Grover	Support Instrument Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2952	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Samples and controls status doesn't change to "Stored"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2589	Defect	Closed	Mikhail Terpugov	Capture QC Review - Need to change the name of Pooled Samples to Pools	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2396	Tweak	Closed	Swati Giri	Update PRO-0017032 Test method/parameter list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2203	Defect	Closed	Swati Giri	QC Batches List Page -Displayed 'Number of Patient Samples' value is incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1954	Story	Closed	Monish Grover	Support Reagent Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1839	Story	Closed	Michael Livingston	Track Input/Output Plate Barcodes in Automated Run Details - Extraction Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1566	Story	Closed	Michael Livingston	Tissue Extraction 1 > Min/Max Thresholds for Tissue Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1474	Story	Closed	Mikhail Makarin	Process Blood Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 22 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3419	Task	Closed	—	Wes On X Test Cases and Automation Status Cleanup & Actualization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3352	Task	Closed	Kersha Eddy	Instrument configuration for E2E testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3328	Defect	Closed	Meghana Joshi	Wes on X: Capture PCR Cleanup - Error when processing plates that were requanted in Lib Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3275	Task	Closed	Matt Smith	LOPS 1.0.0.0 RC 2 deployment - PSPC environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3273	Defect	Closed	Mikhail Makarin	Plate with blood filler failed after Fragmentation has been performed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3269	Tweak	Closed	—	Missing Sonicators in assorted environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3268	Story	Closed	Kevin Detweiler	Display ‘Number of Passed Samples/Pools’ at Extraction/Library/Capture QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3180	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Tissue Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3165	Tweak	Closed	Kevin Detweiler	Update: Create Blood/Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3074	Story	Verified	Michael Livingston	Capture QC Review: Display Blood/Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3073	Story	Closed	Michael Livingston	Library QC Review: Display Blood/Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3072	Story	Closed	Mikhail Terpugov	Blood Extraction Results Review: Display Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3063	Story	Closed	Swati Giri	QC Batch List Page: Display Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3060	Story	Closed	Meghana Joshi	Include Timestamp, Location, and Username in Blood Extraction Worklist File Name	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2954	Defect	Closed	Klead Fusha	Extraction QC Review - Accept partial: Failed Samples Page doesn't have all necessary columns	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2824	Story	Closed	—	Sequencing Prep Re-Run: Support Filler Samples - Test Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2688	Defect	Closed	Mikhail Terpugov	Wes On X: Blood Extraction - Recording of 'Blood Extraction' Run Details is not enforced/tracked	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2643	Story	Closed	Klead Fusha	WES: Standardize Group Test Methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2603	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains required columns	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2394	Defect	Closed	—	Capture Quant - Run Details - Rename Reagent name on Consumable Chooser Dialog	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1711	Tweak	Closed	Michael Livingston	Array List Page: Update Columns, 'Array Method Description', and 'Array Layout Description'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1475	Story	Closed	Mikhail Makarin	Process Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1473	Story	Closed	Mikhail Makarin	Sample List View: Display Blood/Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1472	Story	Closed	Kevin Detweiler	Create Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1456	Story	Closed	Michael Livingston	Extraction QC Review: Display Blood/Tissue Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1250	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Verify Tissue Samples on Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 21 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3238	Defect	Closed	Klead Fusha	Wes On X: BERR - Infinite spinner when logging exceptions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3215	Defect	Closed	Klead Fusha	Wes On X: Quant Plating - Error processing rundata file (Array method null is not applied)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3176	Story	Closed	Klead Fusha	WES: Support Received Samples for Tissue Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3134	Story	Closed	Klead Fusha	WES: Support Received Samples for Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3130	Task	Closed	Kathy Dao	Support Onboarding and Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3123	Defect	Closed	Swati Giri	WES on X - 'Basic Search' for Box Barcode on the Rack/Box List Page doesn't work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3096	Task	Closed	Klead Fusha	WES: Support Sample Receipt (Investigation)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2900	Story	Closed	Matt Smith	Support Exceptions for Assay QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2893	Story	Closed	Kevin Detweiler	Blood Extraction Worklist: Support Blood Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2883	Defect	Closed	Mikhail Makarin	Wes On X: Quant Concentration Calculation - Negative .XY5 values are rounded incorrectly	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2856	Story	Closed	Matt Smith	Create Normalization Worklist - Test with Exception Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2855	Story	Closed	Matt Smith	Create Pre-Capture Pooling Worklist - Test with Exception Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2847	Defect	Closed	—	WES on X: Tissue Extraction QC Review - Log exception action - List of possible exceptions has not applicable options fo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2691	Defect	Closed	Klead Fusha	Wes On X: BERR - Completion of BERR step is not mandatory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2550	Defect	Closed	—	WES on X: BERR - List of possible exceptions has not applicable options for blood	team: null
LOPS-2442	Story	Closed	Matt Smith	Support Tissue Exceptions for Assay Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2441	Story	Closed	—	Support Blood Exceptions for Assay Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2142	Tweak	Closed	Kevin Detweiler	Tissue Extraction Workflow: QC Batch List View > Support 'WES Actions' Menu	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1710	Tweak	Closed	Swati Giri	Plate List Page: Order Options in 'Download WES Worklist' and 'Upload WES Rundata'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1574	Defect	Closed	Meghana Joshi	Wes On X: BERR - Error Descriptions are not displayed for samples with more than one Error Code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1471	Story	Closed	Kevin Detweiler	Create Blood Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1463	Story	Closed	Kevin Detweiler	Tissue Extraction 1 > Select Tissue Samples > Display Filler Samples, Display Columns	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1287	Story	Closed	Klead Fusha	Tissue Extraction 1 > Select Tissue Samples: Add Control 'Reagent' to QC Batch as Required	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1251	Story	Closed	Kevin Detweiler	Tissue Extraction 5 > Tube Verification - Select Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1224	Story	Closed	Mikhail Terpugov	Sample List Page: Display Columns for Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 20 (81 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3390	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 5 Blood Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3389	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 6 - Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3388	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 4 - Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3387	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 3 Blood Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3386	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 2 Blood Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3385	Sub-task	Closed	Swati Giri	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 1 Blood Workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3270	Task	Closed	Michael Livingston	Adding the missing sonicators to assorted environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3266	Tweak	Closed	Swati Giri	Update the Histology job type with AssayDisposition Role	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3246	Tweak	Closed	Swati Giri	Add the missing negative control sample type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3213	Sub-task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, PIPE-7/8/9/10	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3212	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 6 - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3211	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 5 Tissue Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3210	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 4 - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3209	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 3 Tissue Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3208	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 2 Tissue Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3207	Sub-task	Closed	Kevin Detweiler	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path, Run 1, Tissue Workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3206	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 2, Unhappy Path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3188	Task	Closed	—	Creation of the Run 2 - 6 samples for WES-X E2E testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3187	Task	Closed	—	Creation of the Run 1 samples for WES-X E2E testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3179	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Blood Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3177	Task	Closed	Michael Livingston	Missing sequencer(s) in the wes-e2e-01 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3173	Task	Closed	Michael Livingston	Manual correction of the tissue primer plate map in the E2E RC 1 deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3170	Tweak	Closed	Mikhail Makarin	Wes on X: QC Review - Controls that failed QC are not displayed as Rejected in Plate Map UI	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3169	Story	Closed	Michael Livingston	WES: Update Tissue Primer Plate Map	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3168	Defect	Closed	Michael Livingston	Wes On X - 'Arrays Completed Workflow Step' doesn't display Status=Reviewed plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3167	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Reject) - Assign incident to Histopathology Department = ATX Histopath COMM	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3166	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Accept Partial) - Incorrect sample id is displayed for new incident after ru-run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3162	Defect	Closed	—	Incorrect sequencing barcodes for Positive Control	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3161	Defect	Closed	Leonid Garin	Incorrect well location used for primer lookup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3159	Task	Closed	Swati Giri	Creation of a set of samples for self-guided user testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3158	Sub-task	Closed	Kevin Detweiler	Tissue Workflow Demo Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3157	Sub-task	Closed	—	Blood Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3156	Task	Closed	—	LOPS/WES X UAT Preparation - E2E Demo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3149	Task	Closed	Deon Hughes	Missing Negative control Sample Type in the gsp-integration-01 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3129	Defect	Closed	—	Optional form fields on WesBloodExtractionRunDetails are disabled from taking user input	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3126	Defect	Closed	Matt Smith	LOPS can't process accessioning event from bridge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3124	Defect	Closed	Michael Livingston	Missing sequencer(s) configuration during deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3109	Defect	Closed	Michael Livingston	Wes On X: Sequencing - Arrays Completed Workflow Step doesn't display SEQ plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3099	Defect	Closed	Meghana Joshi	Library QC Review -Fail plate Action> Sample status doesn't change to stored and Controls status stays valid	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3088	Task	Closed	—	E2E User Documentation - LOPS 1.0.0.0 RC 1, Happy Path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3087	Task	Closed	—	E2E Dev Team Testing - LOPS 1.0.0.0 RC 1, Happy Path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3085	Defect	Closed	—	Capture QC Review: Fail Plate and Re-Run - Samples and controls status doesn't change to "Stored"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3080	Task	Closed	—	Extend happy path test automation script to support user's e2e scenarios	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3078	Task	Closed	—	Align the LOPS Build Zero deployments for PSPC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3040	Defect	Closed	Swati Giri	Arrays page -> Searching by Arrays id isn't working	team: null
LOPS-2994	Task	Closed	—	WES: Define Users and Access	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2993	Story	Closed	Brad Garrett	WES: Support Histopathology Rework Incident	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2975	Defect	Closed	Brad Garrett	WES on X: Library QC Review > Partial Accept > Create a Histopathology Rework Incident for every Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2974	Defect	Closed	Brad Garrett	WES on X: Library QC Review > Partial Accept > Confirmation message isn't shows sample barcode(s)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2953	Defect	Closed	Klead Fusha	There is an Error when sending NOT failed Blood Library Amplification Plate (WLP2) to Re-Run	team: null
LOPS-2951	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow s	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2942	Defect	Closed	Klead Fusha	Extraction QC Review: Fail Plate and Re-Run Tissue - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2922	Defect	Closed	Michael Livingston	Extraction Quant - Re-Upload Quant rundata - Complete WesExtQuantResult TM for each instance.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2912	Story	Closed	Swati Giri	Support Barcode Display and Scan throughout WES Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2887	Task	Closed	Michael Livingston	LOPS-1128 Code Review Comments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2818	Defect	Closed	Mikhail Makarin	WES on X: BERR - Plate with 'Log exception & Fail assays' samples couldn't finish Upload Ext Quant Rundata - Plating	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2604	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains correctly filtered DNA Sequencers, "NOVA SEQ X" is	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2572	Story	Closed	Brad Garrett	WES: Support Sequencing Prep Re-Run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2571	Story	Closed	Klead Fusha	WES: Support Hybrid Capture Re-Run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2570	Story	Closed	Mikhail Makarin	WES: Support Histopathology Re-Run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2568	Story	Closed	Mikhail Terpugov	WES: Support Blood Extraction Re-Run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2518	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue/Blood Combined POOL Re-Run starting from Sequencing Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2517	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Hybrid Capture	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2516	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Hybrid Capture	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2515	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2514	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2513	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue SAMPLE Re-Run starting from Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2510	Defect	Closed	Klead Fusha	Capture QC Review - Library Amplification Plate Barcode should be displayed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2407	Story	Closed	Klead Fusha	Update Capture QC Review page for Hybrid Capture Re-Run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2406	Story	Closed	Meghana Joshi	Update Capture QC Review page for Re-Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2405	Story	Closed	Klead Fusha	Capture QC Review: Action > Fail Plate and Re-Run from Hybrid Capture	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2402	Story	Closed	Mikhail Makarin	Capture QC Review: Action > Fail Plate and Re-Run from Blood Extraction/Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2401	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2383	Defect	Closed	Brad Garrett	Wes On X: Tissue Extraction - Separate Tissue button must be used to download Tissue Ext Worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2278	Defect	Closed	Matt Smith	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample (Tissue Extraction)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2244	Defect	Closed	Klead Fusha	Create Normalization WorklistTissue should be available via Download WES Worklist - Download Normalization Worklist dro	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1881	Defect	Closed	Klead Fusha	Wes on X: Lysis And Decrosslinking - Test Method status is Released if samples are marked Completed prior to entering QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1530	Story	Closed	Brad Garrett	Assay QC Review: Support Blood SAMPLE Re-Run starting from Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1430	Story	Closed	Meghana Joshi	Capture QC Review: Actions > Re-Quant Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1283	Story	Closed	Meghana Joshi	Capture Quant > Record New Capture Quant Values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1048	Defect	Closed	Mikhail Makarin	WES Sequencing - Natera Lot # and/or Natera Part # for Flow Cell are not being validated through highlighting	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 19 (57 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2962	Defect	Closed	Brad Garrett	Failed Samples Not Marked as Rework Candidate in Partial Plate Approval	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-242)
LOPS-2916	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - WesSequencingPrepRunDetails TM is not getting Completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2851	Defect	Closed	Michael Livingston	Wes On X - Error Creating Sequencing Manifest since WES Capture QC AM lacks Pipeline Code value	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2850	Defect	Closed	Brad Garrett	Wes On X: Normalization - Blood/Tissue Normalization worklsits are generated incorrectly	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2843	Story	Closed	Meghana Joshi	WES: Capture QC Review - Task-Based User Flow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2834	Defect	Closed	Mikhail Terpugov	Capture Quant - Replace WESCaptureQCRunDetails with WESCaptureQCRunDataEntered in WesCaptureQuantWorkflow Group TM	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2832	Defect	Closed	Michael Livingston	Download Library Prep worklist failed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2827	Task	Closed	Kathy Dao	Support Onboarding and Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2807	Defect	Closed	Klead Fusha	WES on X: BERR - Fail & Re-extract doesn't work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2792	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (SELECT ai.itemlabel \| Single value expected instead of 289 rows, Query.ja	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2788	Defect	Verified	—	Library QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action (Test only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2786	Task	Closed	—	Document WES specific e2e script for PSPC integration testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2750	Defect	Closed	Swati Giri	Wes On X: Pre-Capture Pooling - Worklist can't be created	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2718	Story	Closed	Kevin Detweiler	WES: Track Sequencing Run Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2715	Defect	Closed	Meghana Joshi	WES on X: Normalization - Control should be validated for a correct part number	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2685	Defect	Closed	Kevin Detweiler	Wes On X: Hybridization Thermal Cycler - Step can't be completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2683	Defect	Closed	Klead Fusha	Wes On X: Sequencing - Final 'Sequencing Prep' Array Method is not compatible with Seq Man requirements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2660	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - Concentrations are set up only for the first WesExtrQuantResult Dataset	team: null
LOPS-2656	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - QC Review is performed for the first WesExtQuantResult TM and DataSet after	team: null
LOPS-2586	Defect	Closed	Mikhail Terpugov	Capture Quant Run Details - Rename WESCaptureQCRunDataEntered Test Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2585	Defect	Closed	Meghana Joshi	Capture QC Review - WESCaptureQC Test method isn't completed after QC review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2567	Story	Closed	Kevin Detweiler	WES: Send Status Message for Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2533	Defect	Closed	Brad Garrett	Wes On X: Blood Extraction - Re-Test Whole Blood sample's WesBlood Test Method is not getting completed after re-extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2532	Defect	Verified	—	Wes On X: QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2526	Defect	Verified	—	Wes On X - Error Creating Sequencing Manifest (Required String 'reagentlotid' is null or empty)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2502	Defect	Verified	—	Wes on X: Error running Sequencing Prep step (AssignNextGroupTest.java:56)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2497	Defect	Closed	Meghana Joshi	Wes On X: Tissue Extraction - TXE samples have WesTissueDnaExtraction Test Method that doesn't get Completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2487	Task	Closed	Swati Giri	Implement Barcode scanning on every step of WES assay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2461	Defect	Closed	Meghana Joshi	Upload WES Normalization Rundata does not validate reagents	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2439	Defect	Verified	—	Wes On X: Capture Quant Run Details - RunDataEntered Param Data Type is incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2420	Defect	Closed	Meghana Joshi	Library Amplification Tissue - Rundata could't be processed with prod-like Reagent header	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2399	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2398	Story	Closed	Mikhail Makarin	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2386	Defect	Closed	Mikhail Terpugov	Wes On X: Normalization Worklist - Odd formatting for sample concentration values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2375	Story	Closed	Kevin Detweiler	Update Library QC Review page for Re-Quant (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2343	Story	Closed	Swati Giri	Extraction Quant: Calculated Concentration for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2342	Story	Closed	Mikhail Terpugov	Extraction/Library Quant: Round Calculated Concentration (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2340	Story	Closed	Mikhail Terpugov	Capture QC: Update Min QC Threshold Symbol (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2339	Story	Closed	Mikhail Terpugov	Library QC: Update Min QC Threshold Symbol (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2338	Story	Closed	Mikhail Terpugov	Extraction QC: Update Min QC Threshold Symbol (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2335	Tweak	Closed	Kevin Detweiler	Update sample type from "Unknown" to "Control" for the QC Method for Select Tissue Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2319	Defect	Verified	—	Download WES Normalization Worklist Tissue - generates file without actual values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2240	Story	Closed	Klead Fusha	Extraction QC Review: Action > Fail Plate and Re-Run - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2239	Story	Closed	Mikhail Terpugov	Extraction QC Review: Action > Fail Plate and Re-Run - Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2215	Story	Closed	Klead Fusha	Extraction QC Review > Approve Plate: Exception for Failed Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2214	Story	Closed	Klead Fusha	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2207	Tweak	Closed	Swati Giri	WES on X: Zone and Control Colors	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2202	Story	Closed	Brad Garrett	Library Prep - Create Worklist for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2132	Defect	Verified	—	Wes on X: Tissue Extraction: Tube to Rack - Control sample can't be scanned since it lacks a barcode	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2131	Defect	Closed	Brad Garrett	Wes on X: Tissue Extraction: Tube to Rack - Patient samples can't be scanned without using an alias workaround	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2121	Defect	Verified	—	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1870	Story	Closed	Meghana Joshi	Pre-Capture Pooling: Exclude Failed Samples from Worklist > Exclude 'Library QC' Failed Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1455	Story	Closed	Michael Livingston	Update Extraction QC Review page for Re-Quant (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1293	Task	Closed	Michael Livingston	Sequencing Manifest - Review and Update Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1274	Story	Closed	Kevin Detweiler	Library QC Review: Actions > Re-Quant Plate (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1270	Story	Closed	Mikhail Makarin	Library Quant > Re-Upload Quant Rundata	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1128	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 18 (30 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2805	Defect	Closed	Leonid Garin	Wes On X - Error Creating Sequencing Manifest ('%Tumor-Selected Area' data entry did not set for the sample, CreateSeque	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2741	Defect	Closed	Brad Garrett	Wes On X: BE Quant - Worklist can't be created	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2681	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - Step can't be completed with 'Blood pool not found for plate' error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2672	Task	Closed	Swati Giri	Sprint 17 UAT Support: Build Deployment & User Test Data Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2644	Defect	Closed	Michael Livingston	Wes On X - WesRackToPlate TM and WESTissueDNAExtraction test are absent in WesTissueExtractionWorkflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2641	Task	Closed	Swati Giri	Create data for user testing - Sprint 17	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2557	Defect	Verified	Klead Fusha	WES on X: BERR - Gentle option for leaving page isn't available	team: null
LOPS-2547	Defect	Verified	—	Wes on X: Sequencing - The way Flow Cell ID data is stored is not compatible with platform requirements for Sequencing M	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2546	Defect	Verified	—	Wes on X: Sequencing - The way sequencer data is stored is not compatible with platform requirements for Sequencing Mani	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2483	Defect	Closed	Mikhail Terpugov	Wes On X: QC Review - Page doesn't display Array Level values when it's opened	team: null
LOPS-2482	Defect	Verified	Mikhail Terpugov	Wes On X: Blood/Tissue Extraction Quant Results - Calculated Concentration values are not saved on a Sample level	team: null
LOPS-2462	Story	Closed	Michael Livingston	Support Process Type, Sample Number, Sample Type in Library Prep/Amp Worklists	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2400	Story	Closed	Brad Garrett	Library QC Review > Approve Plate: Exception for Failed Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2397	Story	Closed	Mikhail Terpugov	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2370	Defect	Verified	Meghana Joshi	Wes On X: Tissue Library: Quant plate QC Review - Quant plate barcode is not displayed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2362	Defect	Closed	Kevin Detweiler	Known Concentration for Standards is displayed as knownconcentration(Standard)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2345	Defect	Closed	Meghana Joshi	Wes On X: Blood Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2344	Defect	Closed	Meghana Joshi	Wes On X: Tissue Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2332	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'BERR' Failed Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2328	Defect	Closed	Klead Fusha	Blood Lib Quant Plate barcode is not Displayed on QC Review Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2320	Defect	Closed	Meghana Joshi	LV should validate and store trackitems (Standards Reagent) against ExtrQuantPlating file uploaded.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2261	Defect	Verified	Klead Fusha	Wes On X: Tissue Extraction: Quant plate QC Review - Quant plate barcode is not displayed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1863	Defect	Verified	Klead Fusha	Wes On X: BE: Quant plate QC Review - Quant plate barcode is not displayed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1819	Defect	Verified	Kevin Detweiler	Wes On X: Upload Library Prep Rundata - Rundata Processing is failing due to conversion issue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1755	Defect	Closed	Kevin Detweiler	Wes On X: Tissue DNA Extraction: Run Details - Tissue DNA Plate Barcode suffix is not being validated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1725	Defect	Verified	—	Wes On X: BE - Destination Well Locations are stored altered (without zeroes)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1425	Story	Closed	Meghana Joshi	Library Amplification - Associate primer plate reagent to plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1419	Story	Closed	Meghana Joshi	Normalization - Add Control 'Reagent' to Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1399	Story	Closed	Meghana Joshi	Extraction Quant - Add Standard as Reagent	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1120	Story	Closed	Meghana Joshi	Extraction Quant > Re-Upload Quant Rundata	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 17 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2488	Defect	Verified	Klead Fusha	Wes On X: Error when creating worklists	team: null
LOPS-2446	Defect	Closed	Meghana Joshi	Wes on X: Sig WES Extraction Quant - Failed to upload quant plating file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2419	Story	Closed	Mikhail Makarin	Support Process Type and Sample Number across all Worklists	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2391	Defect	Closed	Kevin Detweiler	Wes On X - Tissue Positive Control 1/2 QC statuses (Pass/Fail) doesn't shown in zone data at Extraction QC Review (SAMPL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2390	Task	Closed	Michael Livingston	Create New Group Test Methods for Re-Runs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2385	Story	Closed	Kevin Detweiler	WES: Update Blood Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2384	Story	Closed	Kevin Detweiler	WES: Update Tissue Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2317	Task	Closed	Meghana Joshi	Update gen_runlogs.py for pre-capture pooling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2213	Story	Closed	Mikhail Terpugov	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2211	Defect	Closed	Meghana Joshi	WES Rack-To-Plate Persist TrackItem	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2206	Story	Closed	Michael Livingston	WES on X: Support Primer Plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2149	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2139	Story	Closed	Mikhail Makarin	Sequencing: Select Sequencer	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1878	Defect	Closed	Swati Giri	Blood Extraction: Remove ‘Instrument’ and ‘Reagent’ Free Text Fields from Manual Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1418	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'Extraction QC' Failed Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1413	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail and Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1292	Story	Closed	Mikhail Makarin	Sequencing: Create RunDetails Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1291	Story	Closed	Klead Fusha	Sequencing Prep: Create Sequencing Prep Pool	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1290	Story	Closed	Klead Fusha	Sequencing Prep: Create RunDetails master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1289	Story	Closed	Meghana Joshi	Sequencing Prep: Create RunDetails master data for Transfer Volume	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1288	Task	Closed	Meghana Joshi	Spike - Investigate and document design plan for calculating and displaying transfer volume	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1286	Story	Closed	Mikhail Terpugov	Capture QC Review - Create QC Review Page and Actions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1285	Story	Closed	Meghana Joshi	Capture QC - Plate-Level QC Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1278	Story	Closed	Mikhail Makarin	Hybridization Thermal Cycler - Create RunDetails master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1276	Story	Closed	Mikhail Makarin	Pre-Capture Pooling - Create Worklist Processor and button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 16 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2119	Defect	Closed	Michael Livingston	Wes on X: Deparaffinization - Incorrect Control description	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2027	Story	Closed	Klead Fusha	Library Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2026	Story	Closed	Klead Fusha	Library Quant: Rundata - Plating > Store Rundata File as Attachment (Blood)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2025	Story	Closed	Klead Fusha	Extraction Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1956	Story	Closed	Klead Fusha	Library Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1895	Story	Closed	Leonid Garin	The system shall maintain the genealogy of arrays created via rundata file processing.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1879	Story	Closed	Klead Fusha	Extraction Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1869	Story	Closed	Klead Fusha	Extraction Quant - Create Worklist for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1758	Story	Closed	Meghana Joshi	Library QC Review - QC Review Page for Tissue Library QUANT Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1756	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review Page for Tissue Library SAMPLE Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1745	Story	Closed	Mikhail Terpugov	Library Prep - Process Rundata, Create Plate for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1563	Story	Closed	Mikhail Makarin	Library QC - Create Plate-Level Tissue Quant QC Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1562	Story	Closed	Mikhail Makarin	Library QC - Create Tissue Sample / Control Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1470	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1458	Story	Closed	Meghana Joshi	Tissue Extraction 9 > Tissue Re-Rack - Unload Tissue Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1457	Task	Closed	Michael Livingston	Spike - Investigate new platform re-run/exception functionality for implementation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1431	Story	Closed	Meghana Joshi	Capture Quant - Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1284	Story	Closed	Meghana Joshi	Capture QC - Sample-Level QC Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1282	Story	Closed	Klead Fusha	Capture Quant - Create array method and record results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1281	Story	Closed	Klead Fusha	Capture PCR Cleanup - Create Rundata processor and Update Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1280	Story	Closed	Michael Livingston	Capture PCR Cleanup - Create Worklist Processor and Button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1277	Story	Closed	Meghana Joshi	Pre-Capture Pooling - Create Rundata Processor and Update existing Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1265	Story	Closed	Meghana Joshi	Library Quant - Create Worklist, Process Rundata (Results/Plating), Create Plate for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1259	Task	Closed	Brad Garrett	Tissue Extraction 9 > Tissue Re-Rack - Spike - investigate unload tissue samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1182	Story	Closed	Swati Giri	Create a Query for the Array page to select Blood/Tissue Plates for Pre-Capture Pooling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint 15 (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2234	Tweak	Closed	Klead Fusha	Remove Lock Attachment Popup - Rundata	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2157	Defect	Closed	Meghana Joshi	Wes on X: Tissue Extraction: Tube to Rack - QC method name doesn't reflect the step name	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2144	Defect	Closed	Mikhail Terpugov	Wes On X - Blood Control QC and Blood NTC Control QC don't display in WLP2 QC review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2056	Task	Closed	Brad Garrett	Capture QC Review - Spike: Create QC Review Page and Actions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2024	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Store Rundata File as Attachment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2023	Story	Closed	Mikhail Terpugov	Normalization - Store Rundata File as Attachment (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1844	Defect	Closed	Klead Fusha	Сontrol information stored at the plate-level during QC review for Norm plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1744	Story	Closed	Michael Livingston	Fragmentation - Record Run Details for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1743	Story	Closed	Klead Fusha	Extraction QC Review - QC Review Page for Tissue Extraction QUANT Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1742	Story	Closed	Klead Fusha	Extraction Quant - Process Rundata, Create Plate for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1635	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review page for Library QUANT Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1560	Story	Closed	Brad Garrett	Extraction QC - Create Tissue Quant Plate Specification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1559	Story	Closed	Brad Garrett	Extraction Quant QC - Create Tissue Sample/control Specifications	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1433	Story	Closed	Brad Garrett	Extraction QC Review - QC Review Page for Tissue Extraction SAMPLE Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1420	Story	Closed	Klead Fusha	Normalization - Create rundata processor, array method for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX Sprint - E2E (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2716	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (Single value expected instead of 256 rows, Query.java:226)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX - Post Launch (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2140	Defect	Closed	—	Wes on X: Tissue Extraction: Tube to Rack - Tissue Control Barcode is not fully visible for user to review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1523	Defect	Closed	Meghana Joshi	Wes On X: BERR - Error Descriptions are hard to read	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

WESonX - Launch (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3105	Defect	Closed	—	Capture QC Review - Re-Quant - Add E-sign for Re-Quant action	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2784	Task	Opened	—	Spike - Investigate "Apply Next Array Method for Testing"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-1906	Defect	Closed	—	QC Batch Sample Type should be required in QC Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1754	Defect	Closed	—	Wes On X: Tissue DNA Extraction: Run Details - Instrument and Reagent labels don't match requirements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

RGT/EQMT 64 20260309 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8917	Task	Ready for Development	Mearat Hou	Custom DNS for Private APIGateway (dev)	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)

Oncology 15-2024 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6927	Defect	Closed	Michael Livingston	The cfDNA Pool Dilution Worklist Generation failed in re run cfDNA Pool Sequencing Process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6884	Story	Closed	Michael Livingston	Spike: Investigate issue with multiple genes for Assay 44	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6849	Task	Code Review	Mai Ton-Nu	Spike - Investigate requirements for Import primers as reagent types	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-6785	Story	Verified	Mehmet Ali Eken	Update Reagent Validation API to include matrix barcode in response	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6780	Task	Closed	Lev Evstratov	SPIKE - investigate automated instrument integration solution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6779	Task	Closed	Howard LaHurreau	SPIKE - investigate automated instrument integration solution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6740	Tweak	Verified	Sri Gorantla	enable users to edit array barcode for gDNA Pool Tapestation Quant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6723	Defect	Verified	Brandon Culver	System must record values for controls	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6711	Task	Closed	Bob Ruff	Create a training environment for PM/users	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6645	Defect	Verified	Brandon Culver	SgniptAlgPipelineRequest fails when both HBA1 and HBA2 genes are listed in assay attributes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6642	Story	Verified	Michael Livingston	Update master data for plasma manual Isolation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6517	Story	Verified	Bob Ruff	Generate a verso worklist for all samples that are available for biobanking	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6477	Story	Verified	Mehmet Ali Eken	Testing not applied to all assays when >1 assay request for the same gDNA sample are processed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6374	Defect	Verified	Michael Livingston	Overall Plate QC values is empty when NTC fails.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5762	Story	Verified	Lev Evstratov	cfDNA Rework Scenario Handling (Pool Quant) - Master Data Updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5192	Task	Closed	Mai Ton-Nu	sgNIPT - Query for Equipment and Reagents used at each sgNIPT workflow step from Extractions to Sequencing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5125	Task	Closed	Ariel Jirau	Migrate python based queries to populate s3 snowflake with Lambda from redshift	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2471	Story	Verified	Howard LaHurreau	LOPS support for Verso batching - sample testing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

OSF M186 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3243	Task	Closed	Kathy Dao	Support Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

MiSeq Workflows (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9861	Story	Opened	Swati Giri	GHPv2- Miseq Pooling Upload Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9841	Story	Opened	Kevin Detweiler	GHPv2 on Miseq: Tramline and Sidebar Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9839	Story	Closed	Kevin Detweiler	Miseq Tramline and Sidebar Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9837	Story	Opened	Swati Giri	GHPv2: Add Miseq to Post Amp Side Bar Menu	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9836	Story	Opened	—	GHPv2 on Miseq Tramline	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9740	Story	SQA Blocked	Kevin Detweiler	Additional Miseq Tramline and Sidebar Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9738	Story	Ready for SQA	Kevin Detweiler	WGS Miseq Sequencing InProgress Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9686	Story	SQA Blocked	Kevin Detweiler	Miseq Tramline and Sidebar Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9515	Story	Ready for SQA	Swati Giri	Miseq Pooling Upload Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9446	Story	SQA Blocked	Swati Giri	Add Miseq to Post Amp Side Bar Menu	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9444	Story	SQA Blocked	Swati Giri	Miseq Tramline	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LV1 Sprint 235 (5/12-5/23) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6844	Task	Closed	Alex Pakhunov	Add Command to the alter_user.sql.j2 File to Give All Available Privileges to dbzuser on the CONTAINERTYPE Table	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20260223 (63) (101 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10061	Epic	In Progress	Elena Kolobanova (Elena Kolobanova)	Automation Testing - 1.0.4.8	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10053	Story	Code Review	Swati Giri	UI Updates to QC Batch Maintenance Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10050	Task	Code Review	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10031	Sub-task	Opened	—	Update kafka configuration for reading topic events.labops.workflow.status.v1	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10025	Task	In Progress	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10024	Task	Opened	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10023	Task	Opened	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10022	Task	Opened	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10021	Task	In Progress	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10020	Epic	In Progress	—	LOPS WES/WGS - Production Support - Sprint 20260223	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10019	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review on Primer Design Review step for WGS product	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10018	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify the Status and Active Array Method on Primer Design Review step for WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-10017	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9862	Story	Code Review	Swati Giri	MiSeq Pooling Download Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9802	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9801	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9762	Task	Ready for Development	—	YALP -LOPS- Send Tissue sample to rework from Histo via API	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9759	Task	Closed	Ize Imai	WES/WGS - Create database reset job for gitlab pipeline	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9753	Sub-task	Closed	—	[WES] Update outdated test cases: Dmitry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9748	Sub-task	Closed	—	[WES] Update GIDs for the migrated automated tests in lops-testrunner	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9747	Sub-task	Closed	—	[WES] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9746	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Dmitry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9745	Sub-task	Blocked	—	[WES] Create relationships with requirements for the migrated test cases: Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9744	Sub-task	Closed	—	[WES] Create relationships with requirements for the migrated test cases: Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9743	Sub-task	Closed	—	[WES] Update outdated test cases: Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9742	Sub-task	Closed	—	[WES] Migrate absent test cases	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9737	Story	In Progress	Kevin Detweiler	WGS Miseq Sequencing Prep Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9711	Defect	In SQA Review	Ray Ward	Unable to reject plates at Capture QC Review if they had multiple library quants	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9696	Sub-task	Closed	—	[WGS] Create GIDs list for the migrated automated tests in lops-testrunner that have to be updated	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9691	Sub-task	Closed	—	[WGS] Update GIDs for the migrated automated tests in lops-testrunner	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9668	Sub-task	Closed	—	Ensure that all the test cases with GIDs collisions were migrated	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9659	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dmitry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9658	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9657	Sub-task	Closed	—	[WGS] Create relationships with requirements for the migrated test cases: Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9649	Sub-task	Closed	—	[WGS] Update outdated test cases	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9648	Sub-task	Closed	—	[WGS] Migrate absent test cases	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9642	Sub-task	Closed	—	[WES] Verify that all requirements were migrated to the Maintenance project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9641	Sub-task	Closed	—	[WGS] Verify that all requirements were migrated to the Maintenance project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9640	Sub-task	Closed	—	[WES] Create the list of test cases that should be migrated/updated	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9639	Sub-task	Closed	—	[WGS] Create the list of test cases that should be migrated/updated	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9636	Story	SQA Blocked	Ray Ward	Enable receiving TNPs from YALP	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9598	Task	In Progress	—	Investigate how LOPS communicates with PIPE in other instances (ex. tfMRD, sgNIPT)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9542	Story	In Progress	Ize Imai	System reads and saves all metrics from PIPE API framework for DAQ	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9533	Task	In Progress	Dennis Lin	Create Confluence pages to assist EPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9530	Story	In Progress	Ray Ward	Allow Administrator role to edit Disposition on AssayMaint page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9459	Story	Ready for SQA	Swati Giri	MiSeq Pooling Download Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9439	Story	In Progress	Kevin Detweiler	MiSeq Qubit	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9417	Sub-task	Closed	—	Update LV_Incdt to call the new action when incidents are created	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9415	Sub-task	Closed	—	Action to publish kafka event	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9414	Sub-task	Closed	—	Create a script to create kafka json format	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9413	Sub-task	Closed	—	Update Script To Get Parent Sample Ids for Rework Samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9392	Sub-task	Closed	—	Create new transaction type for outbound message	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9391	Sub-task	Closed	—	Add System Instrument For YALP	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9378	Story	SQA Blocked	—	Enable Producing Topic For Rework Samples to be send back to YALP	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9377	Story	SQA Blocked	Swati Giri	Create a script for consuming YALP event for TXE tubes	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9330	Task	Opened	—	WES/WGS 1.0.5.0 - Preliminary E2E environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9318	Task	Opened	—	WES/WGS 1.0.5.0 - E2E sample staging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9317	Task	Opened	—	WES/WGS 1.0.5.0 - E2E environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9316	Story	Opened	—	WES/WGS 1.0.5.0 - E2E sample script updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9315	Epic	Opened	—	WES/WGS 1.0.5.0 - E2E Support	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9314	Task	Opened	—	WES/WGS 1.0.5.0 - EPS Training Sessions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9312	Task	Opened	—	WES/WGS 1.0.5.0 - Jama & MasterControl review/sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9311	Task	Opened	—	Prepare merge release/lops-weswgs-1.0.5.0 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9309	Task	Opened	—	WES/WGS 1.0.5.0 - RC environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9307	Task	Opened	Kevin Detweiler	WES/WGS 1.0.5.0 - Lab User Training Sessions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9306	Task	Opened	Kevin Detweiler	WES/WGS 1.0.5.0 - Create User Guides	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9304	Task	Opened	—	Run flaky automated tests manually - WES/WGS 1.0.5.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9303	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9302	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Serhii	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9301	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dmitry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9300	Sub-task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0 - Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9299	Task	Opened	—	Manual WES/WGS regression testing - WES/WGS 1.0.5.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9298	Task	Opened	—	WES/WGS 1.0.5.0 - WGS test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9297	Task	Opened	—	WES/WGS 1.0.5.0 - WES test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9296	Task	Opened	—	WES/WGS 1.0.5.0 - Manual test plan creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9295	Task	Opened	—	WGS automated regression - WES/WGS 1.0.5.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9294	Task	Opened	—	WES automated regression - WES/WGS 1.0.5.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9290	Task	Ready for Development	—	BAM Merge Scenario 13 - No BAM merging of cancelled sample runs	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9289	Task	Ready for Development	—	BAM Merge Scenario 12 - Emergency BAM merge deactivation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9288	Task	Ready for Development	—	BAM Merge Scenario 11 - Duplicate run exclusion	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9287	Task	Ready for Development	—	BAM Merge Scenario 10 - Three runs; last one passes on its own	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9286	Task	Ready for Development	—	BAM Merge Scenario 9 - Three runs with alternating coverage & run failures	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9285	Task	Ready for Development	—	BAM Merge Scenario 8 - Data from a non-coverage failure is not merged	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9284	Task	Ready for Development	—	BAM Merge Scenario 7 - Data from failed sequencing runs is not merged	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9283	Task	Ready for Development	—	BAM Merge Scenario 6 - Data from failed sequencing runs is not sent for BAM merging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9282	Task	Ready for Development	—	BAM Merge Scenario 5 - No BAM merging across different source samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9281	Task	Ready for Development	—	BAM Merge Scenario 4 - WES tissue samples aren't sent for BAM merging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9280	Task	Ready for Development	—	BAM Merge Scenario 3 - WES blood samples aren't sent for BAM merging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9279	Task	Ready for Development	—	BAM Merge Scenario 2 - WGS blood samples aren't sent for BAM merging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9278	Task	Ready for Development	—	BAM Merge Scenario 1 - "Happy Path" BAM merging	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9277	Epic	Opened	—	WES/WGS 1.0.5.0 - BAM Merge Scenario Testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9236	Story	In Progress	Kevin Detweiler	Tissue Return: Update Tissue Return Criteria to pull from Primer Design Review Completion	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9014	Task	Blocked	—	WES/WGS Jama test case migration	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8975	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Update to the Assay QC Review roll-up pass/fail logic	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8974	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Sample-level JasperReport support for merged QC metrics	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8973	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Primer Design QC Review page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8972	Story	Ready for SQA	Kevin Detweiler	BAM Merge: Addition of fields to the Assay QC Review page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8971	Story	Ready for SQA	Ize Imai	Storage of the number of merge candidates at the time of DAQ pipeline launch	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8668	Story	Ready for SQA	Ize Imai	Extend WGS pipeline launch Kafka messages to include previous pipeline job IDs	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8408	Task	Opened	Ize Imai	LOPS WES/WGS Kafka message generators	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8330	Story	In Progress	Ray Ward	SPIKE: Library Prep: Bulk Retest page performance enhancements	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20260209 (62) (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9937	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.6) to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9901	Task	Closed	—	Manual regression testing Mila - WES/WGS 1.0.4.6	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9899	Sub-task	Closed	—	fix test est_TissueExtraction_QcReview_AcceptPartial	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9893	Defect	Closed	—	Re-quant QPCR -> Plate is moved to Historical	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9849	Task	Closed	—	Investigation: Determine lift for LOPS-PIPE Integration	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9804	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9803	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9800	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9799	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20260209	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9796	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Download Tissue Extraction Quant Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9795	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that System will create Tissue Filler Samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9794	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that System will create Blood Filler Samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9784	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Update WGS testcases status after review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9681	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.6	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9680	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.6	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9679	Task	Closed	—	WES/WGS 1.0.4.6 - Jama & MasterControl review/sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9678	Task	Closed	Ray Ward	Prepare merge release/lops-weswgs-1.0.4.6 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9677	Task	Closed	Swati Giri	WES/WGS 1.0.4.6 - RC environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9675	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9674	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9673	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9644	Sub-task	Closed	—	Mila - WGS test cases review in terms of potential test automation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9643	Sub-task	Closed	—	Dragana - WGS test cases review in terms of potential test automation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9638	Story	Verified	Dennis Lin	Add workflow step to Log Exception Pop-up	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9626	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS test cases review in terms of potential test automation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9568	Epic	Closed	Elena Kolobanova (Elena Kolobanova)	Automation Testing - 1.0.4.6	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20260126 (61) (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9728	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Capture Plate is supported from Plate List Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9727	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Library Plate is supported for all available Quant Data	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9726	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify Blood Library Plate Report content	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9715	Task	Closed	—	Review Initial Integration Tests for YALP–LOPS Histo and Research Configuration Handling	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9702	Sub-task	Closed	Ize Imai	investigate how to pool tissue slides to tissue extract via API	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9687	Task	Closed	Ize Imai	Document current deployment and production support ticket process	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9672	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9671	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9670	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9669	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20260126	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9554	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9497	Story	Verified	Dennis Lin	Add Pre-Amp and Post Amp menus to be part of Read-only access	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9418	Task	Closed	—	Slides are stuck in Histopathology, on Dissection step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9061	Task	Closed	—	Investigation: lops-weswgs-1.0.4.1 Performance Issues	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8506	Task	Closed	—	Testing support for CCR-592	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20260112 (60) (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9763	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Capture Plate is supported for all available Quant Data	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9725	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Library Plate is supported from Plate List Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9656	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify Blood Extraction Plate Report Content	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9655	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood Extraction Plate is supported for all available Quant Data	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9654	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that QC Report generation for Blood/Tissue Extraction Plate is supported from Plate List Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9584	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that system support Sequencing Prep Re-Run	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9557	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9556	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9555	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9553	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9552	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20260112	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9516	Task	Closed	Ray Ward	Investigation: Loading of additional samples into a completed plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9188	Task	Opened	Monish Grover	Ensure Accurate Instance-Level QC Association Across Lab Trips	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9187	Task	Opened	Monish Grover	Extend LOPS data product to include additional identifiers	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9144	Task	Opened	—	Investigate Kafka message consumption	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9006	Task	In Progress	Swati Giri	LOPS WES/WGS test automation switchover - AI code conversion tool investigation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8980	Defect	Opened	Ray Ward	Create TXE Tube- Fix task to be compatible with rework samples and canceled slides	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8708	Task	Opened	—	Evaluate and re-configure users with LabOps Manager and LabOps Operator jobtypes in Production	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8502	Task	Closed	Dennis Lin	Correction of older sequencer configurations	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8446	Task	Opened	Dennis Lin	Clean-up of OOnSS-related spurious primer design jobs in LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8389	Defect	Development Blocked	Ray Ward	Test methods remain active after assays are cancelled in LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7854	Task	Opened	Dennis Lin	ARM / LOPS OOnSS Scenario Testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7677	Tweak	Ready for Development	Dennis Lin	Add additional logging to Query.java	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251229 (59) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9508	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.4 - Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9493	Task	Closed	Kevin Detweiler	Verify GHPv2 samples will not display on Existing GUIDE pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9419	Defect	Verified	Kevin Detweiler	Histopathology Operator sees PreAmp and PostAmp menus in sidebar	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9265	Defect	Verified	Kevin Detweiler	PostAmp and PreAmp menus missing in the hamburger menu	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9239	Story	Verified	Monish Grover	Study ID- Add Study column to Array Sample List	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8919	Defect	Verified	Dennis Lin	Histology Operator mustn't see Manage Samples in sidebar	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7028	Defect	Verified	Monish Grover	WES/WGS: Histopathology - Tissue Return: Information missing on "Edit/View Sample" Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251215 (58) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9628	Defect	Verified	Dennis Lin	Users are able to make updates using a read only job type from LIMS menu	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9447	Task	Closed	—	Regression testing for JAMA upgrade	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9310	Task	Closed	—	WES/WGS 1.0.5.0 - Day-Before environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9272	Task	Closed	—	WES/WGS 1.0.4.4 - Jama & MasterControl review/sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9270	Task	Closed	—	WES/WGS 1.0.4.4 - Day-Before environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9057	Task	Closed	—	LOPS WES/WGS Jira Project switchover	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8406	Task	Ready for Development	Kevin Detweiler	Add example worklists and rundata files to the LOPS WES/WGS repo	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251201 (57) (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9476	Task	Closed	—	Cherry Pick and merge ECR work into project branch	team: null
LOPS-9339	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Upgrade Wes Profiles with MERGED_BAM_NUMBER metric	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9274	Task	Closed	—	Run flaky automated tests manually - WES/WGS 1.0.4.4	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9273	Task	Closed	—	WES automated regression - WES/WGS 1.0.4.4	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9271	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.4.4 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9269	Task	Closed	Swati Giri	WES/WGS 1.0.4.4 - RC environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9268	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.4	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9259	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9258	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9257	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9256	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9255	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9254	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9253	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251201	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9229	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Automation - Create WES Blood sample with failed "ON_TARGET_DEDUPLICATED_COVERAGE_MATCHED_NORMAL" metric	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9228	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Automation - Create WES Tissue sample with failed "ON_TARGET_DEDUPLICATED_COVERAGE_TUMOR" metric	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9222	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that returned -FXB (FFPE Paraffin Block) sample could be unreturned	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9194	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Verify that -FXB (FFPE Paraffin Block) sample in status = "Completed" with Assay Status = "Completed" and Receive Date >	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9007	Task	Closed	Ray Ward	LOPS WES/WGS test automation switchover - AI Jama test case generator investigation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8976	Task	Closed	Dennis Lin	Backfill of existing sample Study IDs	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251117 (56) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9180	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9179	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.4.3 - Serhii	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9158	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9157	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9155	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9154	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9153	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9152	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9145	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251117	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9103	Defect	Verified	Dennis Lin	Update Tissue Return Page and gizmo so that samples do not appear more than once	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9097	Task	Closed	—	WGS automated regression - WES/WGS 1.0.4.3	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9095	Task	Closed	—	WES/WGS 1.0.4.3 - Jama & MasterControl review/sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9094	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.4.3 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9093	Task	Closed	Swati Giri	WES/WGS 1.0.4.3 - Day-Before environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9092	Task	Closed	Swati Giri	WES/WGS 1.0.4.3 - RC environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9091	Epic	Closed	Ray Ward	WES/WGS 1.0.4.3 - Deployment Prerequisites	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9008	Task	Closed	Kevin Detweiler	LOPS WES/WGS test automation switchover - UI testing tool investigation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7792	Story	Verified	Ray Ward	Allow multiple sample selection on Assay QC NtrSampleAnalysisReview page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251103 (55) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9141	Task	Closed	Ize Imai	Enable Debug mode for remote k8s hosted LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9077	Task	Closed	Swati Giri	Auto complete sample that fail Assay QC	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9063	Defect	Verified	Monish Grover	PreAmp and PostAmp gizmo menus missing in the 1.4.0.2 release candidate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9054	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9053	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9052	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9051	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9050	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9049	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9048	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251103	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8912	Task	Closed	—	Improve test automation to Support e-Signatures in Histopathology workflow	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8893	Task	Closed	—	Fix TubeVerificationApi/TubeVerification with verifying of QC batch's disappearance on WES/WGS Tube Verification‎ page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8827	Task	Closed	—	Add platform test for StudyId	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251020 (54) (19 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8989	Task	Closed	—	Fix WGS regression tests	team: null
LOPS-8988	Task	Closed	—	Fix WES regression tests	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8983	Task	Closed	Ize Imai	Prep 1.0.4.2 branch (shift 1.0.4.1 to 1.0.4.2, use 1.0.4.1 for ePatch)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8950	Task	Closed	Ize Imai	Merge weswgs-master (1.0.4.0) to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8948	Task	Closed	Ize Imai	Put release-lops-1-2-1-0-1520019 db build in the separated branch with the unique name available for daily regression	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8944	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8943	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8942	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8941	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8940	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8936	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8935	Defect	Verified	Monish Grover	GUIDE: All tramstop header hyperlinks should be removed	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8932	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20251020	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8921	Task	Closed	Ize Imai	Restore SQE environments 10/17	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8892	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Upgrade all WES/WGS steps with allureStep usage	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8841	Task	Closed	Swati Giri	More repairs for the RC environment LOPS WES/WGS deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8643	Defect	Verified	Monish Grover	Unable to find the qPCR/TapeStation files results attachments in LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6717	Story	Verified	Swati Giri	Support e-Signatures in Histopathology workflow	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20251006 (53) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8870	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Fix Test_WGS_HappyPathGuided	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8869	Task	Closed	—	Update Tissue sample extraction QC thresholds	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8833	Task	Closed	—	Improve Quant Concentration autotests	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8822	Task	Closed	Elena Kolobanova (Elena Kolobanova)	Fix Platform tests	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8815	Story	Closed	Ize Imai	Enable BAM merge support for WGS tissue samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8778	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8777	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8776	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8775	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8774	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8772	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20251006	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8744	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Primer Design InProgress step with PASSED metrics	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8737	Story	Verified	Kevin Detweiler	WES/Sig GHP: Update Extraction QC Max Threshold for Tissue CLIA Sample and Tissue Control	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8702	Task	Closed	—	Update auto code for creating Tissue slides at Accessioning step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8693	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can create Primer Design plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8664	Task	Closed	—	Fix Platform tests	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8492	Task	Closed	Ray Ward	Retrieval of quant results for lib prep re-runs	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7963	Story	Verified	Ize Imai	[Back-End] LOPS: Verify receipt of Study ID from ARM Kafka Schema	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20250922 (52) (32 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9363	Story	Ready for SQA	Ize Imai	Update the paramlists to V2	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8738	Task	Closed	—	WES automated tests improvements after release 1.0.3.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8692	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can “Approve Selected” and “Pass Assay” at Assay QC Review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8675	Task	Closed	Swati Giri	Swati Giri - EPS Tickets - LOPS WES/WGS 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8674	Task	Closed	Kevin Detweiler	Kevin Detweiler - EPS Tickets - LOPS WES/WGS 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8673	Task	Closed	Monish Grover	Monish Grover - EPS Tickets - LOPS WES/WGS 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8672	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8671	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8670	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250922	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8667	Task	Closed	Ize Imai	Updated sequencing run info Kafka schema design work	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8476	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing In Progress step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8475	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8474	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can perform Sequencing Prep step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8473	Task	Closed	—	WGS - GUIDE - Verify that user can complete WGS Pool Prep step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8472	Task	Closed	—	WGS - GUIDE - Verify that user can upload Consolidation Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8351	Story	Verified	Monish Grover	Sequencing: WES Sequencing In Progress	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8279	Task	Closed	—	WES/WGS 1.0.3.0 - Jama & manual QA review/sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8278	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.3.0 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8277	Task	Closed	Ray Ward	WES/WGS 1.0.3.0 - Day-Before environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8276	Task	Closed	Ray Ward	WES/WGS 1.0.3.0 - RC environment deployment & testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8274	Task	Closed	Kevin Detweiler	WES/WGS 1.0.3.0 - Lab User Training Sessions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8273	Task	Closed	Kevin Detweiler	WES/WGS 1.0.3.0 - Create User Guides	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8272	Epic	Closed	—	WES/WGS 1.0.3.0 - Deployment Prerequisites	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8269	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Serhii	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8268	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Dmitry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8267	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.- - Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8266	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0 - Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8265	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.3.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8261	Task	Closed	—	WGS automated regression - WES/WGS 1.0.3.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8260	Task	Closed	—	WES automated regression - WES/WGS 1.0.3.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8259	Epic	Closed	—	WES/WGS 1.0.3.0 - Regression Testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8157	Story	Verified	Kevin Detweiler	Sequencing: WES Sequencing Review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20250908 (51) (50 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8525	Task	Closed	—	WES/WGS 1.0.3.0 - Deployment latest versions of Kafka and Samrep on the testing environment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8471	Task	Closed	—	WGS - GUIDE - Verify that user can Download Consolidation Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8470	Task	Closed	—	WesOnX - GUIDE - Verify that user can 'Accept All' at Capture QC Review step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8469	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Results	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8468	Task	Closed	—	WesOnX - GUIDE - Verify that user can Enter Capture Quant Run Details	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8467	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Capture Enrichment Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8466	Task	Closed	—	WesOnX - GUIDE - Verify that user can Download Capture Enrichment Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8465	Task	Closed	—	WesOnX - GUIDE - Verify that user can perform Hyb ATC Run Details	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8464	Task	Closed	—	WesOnX - GUIDE - Verify that user can upload Pre-Capture Pooling Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8463	Task	Closed	—	WesOnX - GUIDE - Verify that user can download Pre-Capture Pooling Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8443	Task	Closed	Ize Imai	Assist with ANALYTICS-36559 for Nate Johnson	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8432	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250908	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8431	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250908	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8430	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250908	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8429	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Promote results to source array for GTAPE	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8428	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Promote results to source array for qPCR	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8427	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250908	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8422	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can perform Upload qPCR Results Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8394	Story	Verified	Monish Grover	Sequencing: Updates to Menu and Sidebar	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8360	Story	Verified	Swati Giri	Sequencing: WES Primer Design In Progress	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8354	Story	Verified	Monish Grover	Sequencing: WGS Sequencing In Progress	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8352	Task	Closed	Dennis Lin	Investigation of the "Add to Lops EPS Tickets"	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8350	Story	Verified	Dennis Lin	Refactor Histology Create Tissue Slides return to Histo Accessioning Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8305	Task	Closed	Ray Ward	Investigate- Incidents not being created correctly	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8275	Task	Closed	—	WES/WGS 1.0.3.0 - PSPC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8270	Story	Verified	Dennis Lin	Sequencing: Update GUI Policy to Lock Sidebar	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8262	Task	Closed	—	WES/WGS 1.0.3.0 - Manual test plan creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8247	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Library QC Review, AcceptAll samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8246	Task	Closed	—	WES - GUIDE - Verify that user can perform Library Quant Results Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8245	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WES - GUIDE - Verify that user can perform Library Quant Plating Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8244	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WES - GUIDE - Verify that user can Download Library Quant Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8243	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can perform Upload Tapestation Results Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8242	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can Upload Tapestation Plate Setup	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8241	Task	Closed	Dmitry Piskunov	WGS - GUIDE - Verify that user can Download Tapestation Plate Setup	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8240	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can Upload qPCR Plate Setup	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8239	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WGS - GUIDE - Verify that user can Download qPCR Plate Setup	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8210	Story	Verified	Dennis Lin	Sequencing: WGS New Sequencing Prep Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8163	Story	Verified	Kevin Detweiler	Sequencing: WGS Sequencing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8162	Story	Verified	Swati Giri	Sequencing: WGS Sequencing Prep	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8161	Story	Verified	Dennis Lin	Sequencing: WGS Pool Prep	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8158	Story	Verified	Swati Giri	Sequencing: WES Primer Design Review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8156	Story	Verified	Abdul Aziz	Sequencing: WES Sequencing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8154	Story	Verified	Swati Giri	Sequencing: WES Capture QC Review	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8152	Story	Verified	Swati Giri	Sequencing: WES Capture Quant	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8151	Story	Verified	Swati Giri	Sequencing: WES Capture Enrichment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8122	Task	Closed	Dennis Lin	Add samples back to u_sourcesamples table	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8094	Story	Verified	Swati Giri	Sequencing: WES Hyb ATC Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8089	Story	Closed	Monish Grover	Create Sequencing Sitemap for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7722	Task	Closed	Ray Ward	GMED audit preparation - LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6234	Story	Verified	Dennis Lin	Hybridization Thermal Cycler: Support 'Hybridization Thermal Cycler' Run Details Task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20250825 (50) (59 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9452	Defect	Verified	Dennis Lin	After 'Accept Partial' on QC Review page, WLP2 plate is not present on the Hybrid Capture page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8410	Task	Closed	Ize Imai	Knowledge share for Data File Definitions in LV1.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8378	Defect	Verified	—	Button name "Hybrid Capture Run Details"	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8362	Story	Verified	Swati Giri	Sequencing: WGS Primer Design In Progress	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8355	Tweak	Closed	Ize Imai	Modify sgNIPT test to improve pipeline test passing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8331	Task	Closed	Ize Imai	Merge second epatch (1.0.2.2) to weswgs-master and propagate to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8307	Defect	Verified	Kevin Detweiler	Library Prep- Users are not seeing GWLP2 plate in qPCR Tapestation page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8306	Defect	Closed	—	Library Prep- Fragmentation step does not provide page for inputting instruments	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8304	Defect	Closed	Dennis Lin	Histology- Creating tissue slides returns users to Histo Accessioning page without block	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8295	Defect	Verified	Dennis Lin	Update to NtrDissection task to include HE Slides	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8294	Defect	Verified	Kevin Detweiler	Updates to WES Extraction Quant Query	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8286	Task	Closed	Ize Imai	Merge weswgs-master (1.0.2.0) and epatch (1.0.2.1) to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8284	Task	Closed	Dmitry Piskunov	WgsOnX - GUIDE - Adjust WES Blood Extraction steps for WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8264	Task	Closed	—	WES/WGS 1.0.3.0 - WGS test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8263	Task	Closed	—	WES/WGS 1.0.3.0 - WES test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8248	Task	Closed	—	WesOnX/WGS - GUIDE - Create TissueDnaReviewApi	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8238	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Upload Library Amp Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8237	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Download Library Amp Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8236	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Upload Library Prep Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8235	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can Download Library Prep Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8234	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can complete Fragmentation step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8233	Task	Closed	Dmitry Piskunov	WesOnX/WGS - GUIDE - Verify that user can Upload Normalization Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8232	Task	Closed	Dmitry Piskunov	WesOnX/WGS - GUIDE - Verify that user can download Normalization Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8231	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction QC Review -> AcceptAll samples	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8230	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction Quant Result Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8229	Task	Closed	Elena Kolobanova (Elena Kolobanova)	WesOnX/WGS - GUIDE - Verify that user can perform Extraction Quant Plating Rundata	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8205	Defect	Closed	—	Filler gDNA samples are not displayed on 'WES/WGS Blood Extraction Samples' page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8202	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250825	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8196	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250825	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8195	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250825	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8193	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250825	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8182	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Rack to Plate step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8181	Task	Closed	—	WesOnX - GUIDE - Verify that user can create WES Blood Filler Sample	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8180	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Extraction step	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8179	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can complete Tissue DNA Review page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8155	Story	Verified	Swati Giri	Sequencing: WES Sequencing Prep	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8132	Sub-task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0-Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8093	Story	Verified	Monish Grover	Sequencing: WES HybridCapture Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8090	Story	Verified	Swati Giri	Create Sequencing Sidebar for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8047	Story	Verified	Abdul Aziz	Library Prep & QC: Array list of Extraction Quant Samples is Grouped by Sample Subtype	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8045	Task	Closed	—	WES/WGS 1.0.2.0 - Jama & DotCompliance sign-off	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8043	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.2.0 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8042	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - Preprod environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8041	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - Day-Before environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8020	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.2.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8016	Epic	Closed	—	WES/WGS 1.0.2.0 - Regression Testing	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7967	Defect	Verified	Monish Grover	Library Prep & QC: Update Extraction Quant Count to only include TDNA Plates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7913	Defect	Verified	Ize Imai	Align repo WES Sequencing array method parameter item IDs with production values	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7809	Story	Verified	Swati Giri	Library Prep & QC Jobtype and Page Security Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7805	Story	Verified	Kevin Detweiler	Library Prep & QC: WES & WGS Extraction QC Review Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7796	Story	Verified	Monish Grover	Library Prep & QC: WES Library Quant Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7795	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library Amp Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7793	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Library Prep Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7791	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Fragmentation Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7789	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Normalization Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7787	Story	Verified	Swati Giri	Library Prep & QC: WES & WGS Library QC Review Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7786	Story	Verified	Monish Grover	Library Prep & QC: WES & WGS Extraction Quant Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7784	Story	Verified	Swati Giri	Create Library Prep & QC Sidebar for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7783	Story	Verified	Monish Grover	Create Library Prep & QC Sitemap for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20250811 (49) (45 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8121	Task	Closed	Ize Imai	Merge weswgs-master (1.0.1.2) to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8080	Tweak	Closed	Ize Imai	WES/WGS Update trackitem.u_containerbarcode column length	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8053	Task	Closed	Dmitry Piskunov	WesOnX - GUIDE - Verify the completion of Blood Extraction Results Review task	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8040	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - RC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8039	Task	Closed	Ize Imai	WES/WGS 1.0.2.0 - PSPC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8038	Task	Closed	Kevin Detweiler	WES/WGS 1.0.2.0 - Lab User Training Sessions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8037	Task	Closed	Kevin Detweiler	WES/WGS 1.0.2.0 - Create User Guides	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8034	Story	Verified	Dennis Lin	Histopathology: View pathologist's H&E Data Entry information on Tumor Tissue Dissection Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8023	Task	Closed	—	WES/WGS 1.0.2.0 - Manual test plan creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8022	Task	Closed	—	WES/WGS 1.0.2.0 - WGS test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8021	Task	Closed	—	WES/WGS 1.0.2.0 - WES test case creation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8018	Task	Closed	—	WGS automated regression - WES/WGS 1.0.2.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8017	Task	Closed	—	WES automated regression - WES/WGS 1.0.2.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8015	Task	Closed	Ize Imai	Toggle off auto assign reviewers for WESWGS merge request bot	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8004	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS WES/WGS 20250811	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8003	Task	Closed	Dennis Lin	Dennis Lin - EPS Tickets - LOPS WES/WGS 20250811	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8000	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS WES/WGS 20250811	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7999	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250811	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7993	Task	Closed	Dmitry Piskunov	Automate TC "Verify that user can records Blood Extraction Run Details"	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7985	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.1.2 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7984	Task	Closed	Ray Ward	WES/WGS 1.0.1.2 - Day-Before environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7962	Story	Verified	Dennis Lin	WES/WGS Create task to resend assay complete message in bulk (repo update)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7957	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.2	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7956	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.2	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7951	Tweak	Closed	Ize Imai	Allow EPS to view the Sequencing Prep volume information of HYB2 plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7943	Story	Verified	Swati Giri	Histology: Move Assay Description to be between Natera Barcode and File Storage Number (Tumor Tissue Dissection Page)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7942	Defect	Verified	Dennis Lin	Histology: Ensure that users will be returned to the Histo Accn page after entering File Storage #, creating tissue slid	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7936	Defect	Verified	Monish Grover	Extraction: Ensure that counter matches # of samples in Extraction Sample queue	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7935	Story	Verified	Kevin Detweiler	Extraction: Performance Enhancements for Box List (Rack to plate page)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7932	Story	Verified	Dennis Lin	Extraction: Update filter to remove Disposed Plates from WES/WGS Blood Extraction, WES/WGS DNA Extraction and WES/WGS Ti	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7931	Story	Verified	Abdul Aziz	Extraction: Update filters on Sample Receipt page to remove Positive Controls	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7927	Story	Verified	Dennis Lin	Histopathology: Remove # of Slides (Raw Value) during Data Entry	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7922	Story	Verified	Ray Ward	WES/WGS During Primer Design Assay Creation, fetch only "Selected" source samples from Blood and Tissue Assays	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7920	Story	Verified	Abdul Aziz	Histology: Update filter to remove Disposed samples from H&E staining and Tumor Tissue Dissection page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7895	Defect	Verified	Monish Grover	Unexpected Active Array Method on WGS Tissue DNA Review‎	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7881	Tweak	Closed	Jesus Zazueta	WES/WGS - Sync master branch with lab instance master branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7871	Story	Verified	Swati Giri	Histology: Candidate for rework data entry location for external cases	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7870	Story	Verified	Abdul Aziz	Extraction: Inform users if sample has been plated already or is a rework sample	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7869	Story	Verified	Kevin Detweiler	Histology: Ability to edit file storage # on Accessioning and Sample Manage Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7867	Story	Verified	Kevin Detweiler	Histology: Display number of cases in sidebar under Tumor Tissue Dissection	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7866	Story	Verified	Abdul Aziz	Histology: Display Assay Description under internal step in Tumor Tissue Dissection>Create TXE Tube	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7858	Task	Closed	Ize Imai	Merge weswgs-master to project branches	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7808	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant Tapestation Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7807	Story	Verified	Monish Grover	Library Prep & QC: WGS Library Quant qPCR Pages	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7727	Story	Verified	Dennis Lin	Allow EPS access to the "remove" button in the source samples element	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS WES/WGS 20250728 (48) (107 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9846	Sub-task	Opened	Peter Riggs	Create new Worklist Generator policy for GHPv2 Blood Extraction	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9623	Defect	Closed	Kevin Detweiler	CLONE - Wrong tramstop name on Extraction Menu landing page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9622	Story	Closed	Monish Grover	CLONE - Extraction: WGS/WES Blood Download Worklist Count	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9621	Story	Ready for SQA	Peter Riggs	GHPv2 - Extraction Sitemap URL Links for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9619	Story	In Progress	Peter Riggs	GHPv2 -Extraction: GHPv2 Blood Download Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9618	Story	In Progress	Peter Riggs	GHPv2 - Extraction: Blood Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9617	Story	In Progress	Peter Riggs	GHPv2 -Extraction: WGS Blood Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9616	Story	In Progress	Peter Riggs	GHPv2 -Create Extraction Sidebar	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9615	Story	Closed	Monish Grover	GHPv2 - Create Extraction Sitemap	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9613	Story	In Progress	Peter Riggs	GHPv2 Extraction: GHPv2 Tissue DNA Review Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9612	Story	Closed	Kevin Detweiler	GHPv2- GHPv2 Extraction Sample Page - Order by Run Number	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9611	Story	Closed	Kevin Detweiler	GHPv2 - Extraction and Histology Jobtype and Page Security Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9610	Story	Closed	Kevin Detweiler	GHPv2 - Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9609	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Rack to Plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9608	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue DNA Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9607	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2Tube Verification Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9606	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tube-to-Rack Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9605	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Lysis and Decrosslinking Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9604	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Deparaffinization Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9603	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Select Tissue Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9602	Story	In Progress	Peter Riggs	GHPv2 - Extraction: GHPv2 Tissue Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7954	Task	Closed	Dennis Lin	WES/WGS Create task to resend assay complete message in bulk (manual deployment)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7882	Task	Closed	Ray Ward	WES/WGS 1.0.1.0 - Preprod environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7880	Defect	Verified	—	Wrong 'Histo Sample Receipt' page name	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7879	Task	Closed	Jesus Zazueta	Improve check ear file on deployment scripts to WES/WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7878	Defect	Verified	Kevin Detweiler	Wrong tramstop name on Extraction Menu landing page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7864	Defect	Closed	—	Fail & Re-Extract sample issue	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7855	Task	Closed	Ize Imai	Prepare merge release/lops-weswgs-1.0.1.0 to weswgs-master	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7853	Task	Closed	Ize Imai	Ize Imai - EPS Tickets - LOPS Sprint 20250728	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7852	Task	Closed	Ray Ward	Ray Ward - EPS Tickets - LOPS Sprint 20250728	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7851	Task	Closed	Kevin Detweiler	Create User Guides and Perform Lab User Training Sessions	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7850	Epic	Closed	—	LOPS WES/WGS - Production Support - Sprint 20250728	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7838	Defect	Verified	Swati Giri	Histopathology Incident page shows an error	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7830	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Dragana	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7829	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Mila	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7828	Sub-task	Closed	—	WES/WGS 1.0.1.0 Manual regression: Serhii	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7748	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - Day-Before environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7747	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - RC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7746	Task	Closed	Swati Giri	WES/WGS 1.0.1.0 - PSPC environment deployment	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7745	Task	Closed	—	Manual WES/WGS regression testing - WES/WGS 1.0.1.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7744	Task	Closed	—	WGS automated regression - WES/WGS 1.0.1.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7743	Task	Closed	—	WES automated regression - WES/WGS 1.0.1.0	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7735	Story	Verified	Kevin Detweiler	Histology: Add link to Assay ID on Data Entry page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7699	Story	Verified	Kevin Detweiler	Extraction Sample Page - Order by Run Number	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7690	Story	Verified	Swati Giri	Histology: Update to Histology Jobtypes and Security	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7689	Story	Verified	Kevin Detweiler	Extraction: Update Rack to Plate counter to reflect number of boxes ready for Rack to Plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7688	Story	Verified	Kevin Detweiler	Extraction: Create Filler Samples page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7687	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Review Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7686	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Review Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7664	Task	Closed	Ize Imai	Disable auto_api_user in PROD (weswgs)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7660	Story	Verified	Kevin Detweiler	Extraction and Histology Jobtype and Page Security Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7659	Story	Verified	Kevin Detweiler	Extraction: Update Run Count Query on WESWGSBloodExtractionSamples page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7617	Story	Closed	Monish Grover	Extraction: Update Blood Extraction Page to link Run Detail Task to Button	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7605	Story	Verified	Monish Grover	Extraction: Update Tube to Rack Task to allow for Take Custody of Box	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7565	Story	Verified	Kevin Detweiler	Extraction: WES/WGS Select Tissue Gizmo update Counter	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7560	Story	Verified	Monish Grover	Extraction: WGS/WES Blood Download Worklist Count	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7555	Defect	Verified	Dennis Lin	WES Sequencing array method broken during merge	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7548	Story	Verified	Kevin Detweiler	Extraction Sitemap URL Links for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7521	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue DNA Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7520	Story	Verified	Kevin Detweiler	Extraction: WES Tissue DNA Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7518	Story	Verified	Kevin Detweiler	Extraction: WES Rack to Plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7516	Story	Verified	Kevin Detweiler	Extraction: WGS Rack to Plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7514	Story	Verified	Kevin Detweiler	Extraction: WGS Tube Verification Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7513	Story	Verified	Kevin Detweiler	Extraction: WES Tube Verification Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7512	Story	Verified	Kevin Detweiler	Extraction: WES Tube-to-Rack Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7511	Story	Verified	Kevin Detweiler	Extraction: WGS Tube-to-Rack Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7509	Story	Verified	Kevin Detweiler	Extraction: WGS Lysis and Decrosslinking Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7508	Story	Verified	Kevin Detweiler	Extraction: WES Lysis and Decrosslinking Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7507	Story	Verified	Kevin Detweiler	Extraction: WES Deparaffinization Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7506	Story	Verified	Kevin Detweiler	Extraction: WGS Deparaffinization Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7505	Story	Verified	Kevin Detweiler	Extraction: WGS Select Tissue Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7504	Story	Verified	Kevin Detweiler	Extraction: WES Select Tissue Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7501	Story	Verified	Monish Grover	Extraction: WES AND WGS Extraction Samples Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7500	Story	Verified	Monish Grover	Extraction: WGS Blood Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7499	Story	Verified	Monish Grover	Extraction: WES Blood Extraction Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7498	Story	Verified	Monish Grover	Extraction: WES Blood Download Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7497	Story	Verified	Monish Grover	Extraction: WGS Blood Download Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7494	Story	Verified	Kevin Detweiler	Extraction: WES Blood Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7493	Story	Verified	Kevin Detweiler	Extraction: WGS Blood Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7492	Story	Verified	Kevin Detweiler	Extraction: WES Tissue Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7490	Story	Verified	Kevin Detweiler	Extraction: WGS Tissue Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7485	Story	Verified	Swati Giri	Histology: WES/WGS Incidents Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7483	Story	Verified	Swati Giri	Histology: WES/WGS Tissue Return Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7482	Story	Closed	—	Histology: WGS Tissue Return Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7481	Story	Verified	Swati Giri	Histology: WES/WGS Dissection Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7477	Story	Verified	Swati Giri	Histology: WES/WGS Pathology Review Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7475	Story	Verified	Swati Giri	Histology: WES/WGS H&E Staining Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7473	Story	Verified	Swati Giri	Histology: WES/WGS Embedding Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7472	Story	Closed	Swati Giri	Histology: WGS Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7466	Story	Verified	Ray Ward	Improvements to Assay QC NtrSampleAnalysisReview page for performance	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7459	Story	Closed	Swati Giri	Histology: WGS Microtomy Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7458	Story	Verified	Swati Giri	Histology: WES/WGS Microtomy Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7455	Story	Closed	Swati Giri	Histology: WGS Accessioning Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7454	Story	Verified	Swati Giri	Histology: WES/WGS Accessioning Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7453	Story	Verified	Monish Grover	Create Extraction Sidebar for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7452	Story	Verified	Monish Grover	Create Extraction Sitemap for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7449	Story	Verified	Swati Giri	Create Histology Sidebar for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7448	Story	Verified	Swati Giri	Create Histology Sitemap for GUIDE Project	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7446	Story	Verified	Swati Giri	Histology: Sample Receipt Page	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7015	Story	Verified	Monish Grover	Active/Historical QC Batch List Pages: Support Actions: Archive/UnArchive	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6902	Story	Ready for Development	Abdul Aziz	Download Normalization Worklist - WES & WGS - Code Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6798	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WES - Master Data Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6612	Story	Verified	Monish Grover	WES/WGS: Auto-Archive Arrays based on Create Date	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5454	Story	Ready for Development	Surbhi Ray	Current Volume Tracking - WGS - Code Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-2449	Story	Closed	—	Re-batching implementation	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-2284	Story	Closed	—	Re-batching for normalization	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-1911	Story	Development Blocked	Surbhi Ray	Current Volume Tracking - WES - Code Updates	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS Production Support Issues (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9791	Defect	In Grooming	—	Hide functionality to Add source sample to existing Assay as part of EPS Admin Role	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9777	Task	Opened	—	Slow load times for the "Select Tissue Samples" pages; anomalous "Run Number" values for WGS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9766	Defect	Opened	—	Update transaction type ITT000013	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9751	Story	Opened	—	Implementation of a run-/batch-level “minimum patient samples passed” threshold for Assay QC	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9709	Task	Opened	—	Prevent Loading of Sample(s) on a Complete Plate	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9688	Defect	Opened	—	Assay attributes trim value or warning validation for extra spaces and new lines	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9684	Task	Opened	—	Investigation: SEQ plates unexpectedly not moving to "WES Sequencing"	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9625	Task	Opened	—	Allow Administrator role to update status to Selected, RETAIN, or ARCHIVE	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9532	Defect	Opened	—	LOPS showing "Overflow" as a value for concentration. Prevents uploading of Lib Quant Results File	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8515	Tweak	Opened	—	Allow Lab Managers or Supervisors to update Plate barcodes.	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8445	Defect	Closed	—	Prevent WES/WGS Primer Designs from being created if their associated Blood or Tissue Assay have a failed disposition	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8174	Story	Opened	—	Removal of the WES flowcell uniqueness check	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8173	Story	Opened	—	Stop storing unnecessary sequencing run fields in LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8172	Story	Opened	—	Removal of the flowcell instrument & side check	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8169	Story	Opened	—	Prevent duplicate SELECT samples from being registered in LOPS	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

LOPS HiHx Impl Sprint 1 M1 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2059	Story	Ready for SQA	Ize Imai	Extraction Configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-263)
LOPS-2058	Story	Ready for SQA	Ize Imai	Dataset/Parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-263)

LOPS WH 20260601 (70) (M24) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9915	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 44 with M19.	team: null
LOPS-9914	Task	Opened	—	2026 Q2: Determine total number of clicks to run through Assay 43 with M19.	team: null
LOPS-9811	Task	Opened	—	gDNA pool Quant runlog not accepted by LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9630	Story	Ready for Development	Michael Livingston	Guided Workflow Guardrails	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9513	Task	Opened	—	Spike - Investigate LOPS AI Assistant for Support and General Questions	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9365	Story	Opened	—	Update LRPCR Primer reagent container amounts and LRPCR Barcoding AM decrement amounts	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260518 (69) (M23) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9526	Task	Opened	Bob Ruff	Lib AMP step with barcode primers	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9149	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Prep Final Dilution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9147	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Run	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9070	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Run	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9067	Story	Ready for Development	Bob Ruff	Guided Workflow: gDNA Sequencing Prep Final Dilution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260504 (68) (M22) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9859	Story	Opened	Michael Livingston	SPRQ work sprint 3	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8864	Story	In Grooming	Bob Ruff	Sidebar Development -Assay 44	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260420 (67) (M21) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9858	Story	In Grooming	Michael Livingston	SPRQ work sprint 2	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9400	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Sidebar Development - Assay 43	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8860	Story	Ready for Development	Bob Ruff	Sidebar Development - Assay 43	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260406 (66) (M20) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9857	Story	In Grooming	Michael Livingston	SPRQ work sprint 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9047	Story	In Grooming	Bob Ruff	Improvement - avoid stuck analysis runs	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8348	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Ability to add Racking Retest to Parent samples easily through known children samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8107	Story	Ready for Development	Bob Ruff	Ability to add Racking Retest to Parent samples easily through known children samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260323 (65) (M19) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9814	Task	Ready for Development	Bob Ruff	Select more than 88 samples in verso.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9700	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Add additional sample identifier to Verso sample list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9629	Story	In Grooming	Michael Livingston	new entry point for Prof Samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9514	Story	In Progress	Michael Livingston	Deployment Strategy to Reduce or eliminate down time	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6576	Story	Ready for Development	Bob Ruff	Add additional sample identifier to Verso sample list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5154	Story	In Grooming	Bob Ruff	LOPS support for Verso batching - sample disposal	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260309 (64) (M18) (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9913	Task	In Grooming	Kristina Feller	2026 Q1: Determine total number of clicks to run through Assay 44 with M17.	team: null
LOPS-9912	Task	In Grooming	Kristina Feller	2026 Q1: Determine total number of clicks to run through Assay 43 with M17.	team: null
LOPS-9646	Defect	In Grooming	Michael Livingston	Samples with failing specs should be skipped in QC Batch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9590	Defect	Ready for Development	Bob Ruff	cfDNA Pool Quant Review Plate status and Sample Status are not updated after ReQuant QC Review is performed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9485	Defect	In Grooming	Michael Livingston	Update Bulk Retest to allow retesting when aliquot samples are in the same sample genealogy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9401	Sub-task	Ready for Development	Bob Ruff	Dev Testing - cfDNA Pool Quant QC Review - ReQuant cannot be performed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9355	Sub-task	Ready for Development	Bob Ruff	Dev Testing - Update Calculation for sgNIPT cfDNA Pool Quant Review	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9333	Sub-task	Ready for Development	Michael Livingston	Dev Testing - pool dilution worklist for HC query does not account for retests	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9326	Story	Ready for Development	Michael Livingston	cfDNA pool dilution worklist for HC query does not account for retests	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9320	Tweak	In Grooming	Michael Livingston	Disable user from generating cfDNA Hyb Day 1 worklist using "Download Worklist" button	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9166	Defect	Ready for Development	Bob Ruff	cfDNA Pool Quant QC Review - ReQuant cannot be performed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8898	Story	Ready for Development	Bob Ruff	Update Calculation for sgNIPT cfDNA Pool Quant Review	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8103	Task	Ready for Development	Bob Ruff	Status IQ view plates associated to processed steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS WH 20260223 (63) (M17) (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10051	Sub-task	Closed	—	Dev Testing - CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9953	Task	Opened	Kristina Feller	SgNIPT Automated Regression for 1.0.16.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9921	Defect	Closed	Michael Livingston	Control Swap process shouldn't swap controls from plates when they are still in progress	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9917	Task	In Progress	Michael Livingston	Spike: Investigate work required to allow sample to proceed with cfDNA extraction even if gDNA extraction fails	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9911	Task	In Progress	Kristina Feller	Determine total number of clicks to run through Assay 44 prior to automated runlog processing and guided workflows (base	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9910	Task	Closed	Kristina Feller	Determine total number of clicks to run through Assay 43 prior to automated runlog processing and guided workflows (base	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9908	Task	In Progress	Michael Livingston	SPIKE: Investigate impact of changing to a standardized 2 streck kit.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9854	Task	Ready for Development	—	Data request: Request Run details for the LRPCR runs	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9792	Story	Verified	Michael Livingston	Support Gene Retesting in Worklist and RunLog Processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9701	Task	Closed	Bob Ruff	Please investigate potential missing barcodes in LV.LOPS.S_SAMPLE table	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9692	Task	Closed	Bob Ruff	Runlog service ECR Docker Registry Migration	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9690	Sub-task	In Progress	Bob Ruff	Dev Testing - cfDNA Pool Quant QC Review - Accept Partial cannot be performed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9165	Defect	Ready for SQA	Bob Ruff	cfDNA Pool Quant QC Review - Accept Partial cannot be performed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8840	Task	Code Review	Michael Livingston	[Data] Generate sgNIPT data product for Analytics team to build sequencing ops dashboard	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8804	Tweak	Code Review	Brandon Culver	Breakdown of samples run through sequencing per gene.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8339	Story	Ready for SQA	Mehmet Ali Eken	Implement dirty data resolving mechanism when getting sample data from LIMS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8338	Story	Ready for SQA	Mehmet Ali Eken	Send notification to LIMS when sample is disposed/biobanked in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8337	Story	Ready for SQA	Mehmet Ali Eken	Implement authentication logic to connect to LIMS API	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8336	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge sample disposal message processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8335	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge assay request message processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8190	Story	In SQA Review	Michael Livingston	CFTR Rack Array Layout for positions E01, E02 and E03 must NOT be left blank.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8100	Task	Code Review	Brandon Culver	Status IQ: allow users to find which Master Mix ingredient was used where	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

GHPv2 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9541	Story	Opened	—	PD Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9540	Story	Opened	—	Convert LOPS->PD Pipeline Launch Message from Kafka to REST API	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)

G64onLOPS Sprint 9 (24) (32 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3671	Tweak	Closed	Brad Garrett	Finish Library Prep - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3670	Tweak	Closed	Brad Garrett	Start Library Prep - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3664	Story	Closed	Brad Garrett	Finish Normalization - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3615	Task	Closed	Hani Yakan	Update WES and WGS Workflow Scripts to Default All Samples to SELECT	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3573	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Log Exception	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3572	Story	Closed	Klead Fusha	Blood Extraction Results Review: Action > Fail & Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3522	Task	Closed	Hani Yakan	Copy existing devtools scripts from "Develop" branch to "LOPS-WESX-E2E"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3515	Story	Closed	Jose Valdivieso	Worklist title for WGS blood extraction file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3503	Sub-task	Closed	Jose Valdivieso	Review WES workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3494	Defect	Closed	Mikhail Terpugov	Address Tissue Control in QCBatch steps causing an error in the AssignNextGroupTest event plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3447	Tweak	Closed	Ron Enson	Standardize 'Array Method' and 'Array Layout'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3436	Sub-task	Closed	—	Review WES Workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3431	Sub-task	Closed	—	Review WES workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3394	Defect	Closed	Klead Fusha	Sample Barcode is not displayed in BERR	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3365	Sub-task	Closed	—	Review WES workflow in local	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3363	Sub-task	Closed	—	Review Wes workflows in local	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3358	Sub-task	Closed	—	Review Wes blood workflow in local	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3356	Sub-task	Closed	Hani Yakan	Review Tissue WES-X workflow up to completing create QC Batch.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3355	Task	Closed	—	WES-X workflow practice for the G64 team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3277	Defect	Closed	Brad Garrett	WGS section in the Array List page contains various inconsistencies and misplaced buttons	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3265	Defect	Closed	Hani Yakan	References to WES in Quant 384WellPlate Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3232	Defect	Closed	Ron Enson	Parameter value of Unknown samples not populated when viewed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3231	Defect	Closed	Ron Enson	Reagents parameter problem with default run log headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2927	Story	Closed	Brad Garrett	Start Normalization - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2898	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction - platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2837	Story	Closed	Mikhail Terpugov	7-Tissue DNA Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2836	Story	Closed	Brad Garrett	6-Rack To Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2524	Story	Closed	Mikhail Terpugov	Start Tapestation Plate Setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2498	Task	Closed	Klead Fusha	Consolidation worklist generator and rundata processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1944	Story	Closed	Klead Fusha	Start qPCR Plate Setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1943	Story	Closed	Gianna Bell-Eunice	Finish Library Amp	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1936	Story	Closed	Brad Garrett	Tissue Extraction Quantification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 8 (23) (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3460	Task	Closed	Hani Yakan	Copy existing devtools scripts from LOPS-DEV-21 to LOPS-MVP-21	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3455	Task	Closed	Klead Fusha	Spike Task: Investigate comparative effort between creating BERR copy and updating task to make configurable	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3449	Story	Closed	Hani Yakan	Modify WGS Group TM to remove child sample plan details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3432	Story	Closed	Olawale Dada	Adding WGS TM to Tissue workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3411	Defect	Closed	Brad Garrett	QC Batch Data Entry throws an error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3395	Defect	Closed	Jose Valdivieso	QC Views Zone Data does not populate correctly	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3380	Defect	Closed	Hani Yakan	Modify WGS-Tissue-Extraction-Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3288	Story	Closed	Hani Yakan	Update-WGS-Tissue-Sample-Master-Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3276	Task	Closed	Brad Garrett	Modify "Download WGS Worklist" menu	team: null
LOPS-3110	Story	Closed	Klead Fusha	Support G64 extraction quant plate barcode suffixes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3077	Story	Closed	—	Validate controls for WGS Normalization - Test Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2960	Task	Closed	Klead Fusha	Tissue Extraction Quantification Review - platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2842	Task	Closed	Klead Fusha	4-Tube To Rack - platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2783	Story	Closed	Olawale Dada	3-Lysis and decrosslinking Button and Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2782	Story	Closed	Jose Valdivieso	2-Deparaffinization Button and Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2780	Story	Closed	Brad Garrett	5-Tube Verification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2779	Story	Closed	Brad Garrett	4-Tube To Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1938	Story	Closed	Hani Yakan	Finish Normalization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 7 (22) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-3218	Task	Closed	Matt Smith	Port the WES workflow set-up script to WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 6 (21) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2852	Story	Closed	Brad Garrett	Create WGS Blood workflows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1942	Story	Closed	Gianna Bell-Eunice	Start Library Amp	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1941	Story	Closed	Gianna Bell-Eunice	Finish Library Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1940	Story	Closed	Ron Enson	Start Library Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 5 (20) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3184	Tweak	Closed	Gianna Bell-Eunice	Update Samples Pending Receiving page to allow receipt of Samples with additional receiverequiredflag values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2959	Task	Closed	Hani Yakan	Merge LOPS-MVP-20 into LOPS-DEV-20	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2833	Defect	Closed	Ron Enson	Blood Extraction Upload process throw issue that classification field is mandatory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2781	Story	Closed	Hani Yakan	1-Select Tissue Samples Button and Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2451	Story	Closed	Ron Enson	Create WGS Library Prep Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2225	Story	Closed	Hani Yakan	Process results for WGS extraction quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2224	Story	Closed	Ron Enson	Process rundata for WGS extraction quant plate setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2223	Story	Closed	Ron Enson	Generate worklist for WGS extraction quant plate setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 4 (19) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3239	Sub-task	Closed	—	Generate Blood Extraction Quant Worklist trows error: Required property 'worklistdir' not found in property list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2474	Story	Closed	Gianna Bell-Eunice	Create WGS Library Amp and WGS Library Prep Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2378	Story	Closed	Hani Yakan	Create WGS Normalization Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2259	Story	Closed	Brad Garrett	WGS Blood Extraction QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2222	Story	Closed	Ron Enson	Create WGS extraction quant master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2201	Story	Closed	Gianna Bell-Eunice	Page to review WGS blood extraction results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2200	Story	Closed	Gianna Bell-Eunice	Assay Template for WGS Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1939	Story	Closed	Gianna Bell-Eunice	Perform Fragmentation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1937	Story	Closed	Brad Garrett	Start Normalization - Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 2 (17) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2346	Story	Closed	Brad Garrett	WGS Blood Extraction rundata processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2307	Task	Closed	Hani Yakan	Create WGS test samples with devtools	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2227	Story	Closed	Brad Garrett	WGS Blood Extraction worklist generator	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2198	Story	Closed	Hani Yakan	Assay Template for WGS Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2195	Story	Closed	Ron Enson	Create WGS blood extraction master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 17 (32) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5189	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: Platform	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5188	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WGS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5187	Sub-task	Closed	—	LOPS 1.1.0.0 automated testing: WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5185	Task	Closed	—	Final automated testing for the LOPS 1.1.0.0 release candidate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5170	Story	Closed	—	WES/WGS: Access for Pathologist User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5168	Defect	Closed	Klead Fusha	Box list page is missing the WGS actions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5161	Story	Closed	—	WES/WGS: Access for Histology User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5144	Task	Closed	Matt Smith	Pre-deployment clean-up of the LOPS production configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5136	Defect	Closed	Brad Garrett	Wes On X: Capture QC - Error when sending blood and tissue sample pools to rerun from BE/Histo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5135	Defect	Closed	Brad Garrett	Runlog header details are not being recorded for some WGS steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5132	Defect	Closed	Michael Livingston	Wes On X: Arrays List page - Order and description of Wes Actions menu items is incorrect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5073	Task	Closed	—	G64 Regression Testing - Dmitry	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5008	Task	Closed	Matt Smith	G64 Launch Build 1 - Production deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5006	Task	Closed	Swati Giri	G64 Launch Build Zero - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4673	Defect	Closed	Klead Fusha	Align WGS Blood and Tissue Extraction WF with WES version	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4158	Tweak	Closed	Michael Livingston	Standardize G64 test methods, array methods, and array layouts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 16 (31) (37 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5149	Defect	Closed	Michael Livingston	Fix description for qPCR array layout	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5122	Task	Closed	Klead Fusha	G64 Pre-Launch Build 1 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5120	Task	Closed	—	Re-merging of LOPS-4126 into the G64 launch branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5117	Tweak	Closed	—	WGS: Access for Lab Ops User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5116	Story	Closed	—	WGS: Access for Extraction User (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5113	Task	Closed	Kevin Detweiler	Request from biodev to retrieve data associated with all E2E scenarios	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5112	Defect	Closed	Klead Fusha	Assay QC page - Complete Review, Array Genealogy, approval/rejection buttons are missing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5096	Task	Closed	Matt Smith	Merge Hotfix 5 into the G64 launch branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5095	Defect	Closed	Michael Livingston	Demo/UAT Support: G64 QC Batch status is dataentered	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5094	Defect	Closed	—	12/11/2024 issues in PSPC testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5093	Defect	Closed	Klead Fusha	Unable to create Sequencing Manifest	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5053	Task	Closed	Swati Giri	G64 E2E Build 4 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5047	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5034	Defect	Closed	Klead Fusha	WGS Primer design array should be created with the blood and tissue samples loaded	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5030	Story	Closed	Michael Livingston	Add validation on buttons for tapestation and qpcr QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5018	Task	Closed	Brad Garrett	G64 E2E Build 3 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5016	Defect	Closed	Michael Livingston	Typo for Sample Barcode column on BERR page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5010	Defect	Closed	Klead Fusha	qPCR result upload is too slow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-5001	Story	Closed	Brad Garrett	Update ProcessType used for WGS at Blood Extraction to WES ProcessType to support QS Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4998	Task	Closed	Liubomyr Skorokhod	Execution of the GHP-WGSPIPE-10/11/12/13 G64 E2E scenarios	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4971	Defect	Closed	Brad Garrett	Duplicate incidents created for samples dequeued from library quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4969	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into G64	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4967	Defect	Closed	Klead Fusha	Tissue Tube verification workflow blocked	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4966	Defect	Closed	Klead Fusha	Rejecting individual wells not being excluded	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4959	Task	Closed	Matt Smith	Create a release version of the LOPS-G64-E2E branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4941	Defect	Closed	Mikhail Terpugov	Failure to push the default average size value	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4935	Defect	Closed	Klead Fusha	Align G64 Extraction Quant specifications/approval types with WES-X	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4840	Story	Closed	Michael Livingston	Median calculation code in Lib Quant needs to handle blank entries	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4765	Story	Closed	Brad Garrett	Test Only - Automatically launch WGS pipeline when sequencing is complete - Unhappy Path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4699	Defect	Closed	Michael Livingston	LOPS doesn't cancel assay if ARM published kafka event with 'CANCEL' action code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3921	Story	Closed	Mikhail Terpugov	Review combined Library Quant Results - Re-quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3858	Story	Closed	Mikhail Terpugov	Tissue Library QC Review: Action > Fail & Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3857	Story	Closed	Mikhail Terpugov	Blood Library QC Results Review: Action > Fail & Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2281	Story	Closed	—	WGS Assay Cancellation - Test only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1970	Story	Closed	—	Rework from Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1969	Story	Closed	—	(Test only) Support Exception from Assay QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1967	Story	Closed	—	Retrigger WGS pipeline - Test only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 15 (30) (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4982	Task	Closed	Liubomyr Skorokhod	Sample creation for G64 E2E testing: Plate 6 for Build 2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4951	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4948	Defect	Closed	—	The DestConcentration value has fewer digits after uploading rundata file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4942	Task	Closed	Brad Garrett	Workaround for G64 E2E for LOPS-4939	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4931	Defect	Closed	Harris Shapiro	WES E2E workflow can not be completed on g64integration-01 environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4928	Defect	Closed	Klead Fusha	[WGS] Tissue Extraction QC Review -> Accept Partial: unexpected behaviour during workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4915	Defect	Closed	Klead Fusha	G64 re-quant config defect: Regression from The Big Merge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4914	Task	Closed	Klead Fusha	Temporary workaround for a re-quant config defect	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4913	Task	Closed	Brad Garrett	Manual recombination of samples from the two Happy Path sequencing pools	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4911	Task	Closed	Brad Garrett	Update ApprovalType and Limit Values on the DAQ Metrics profiles in E2E & Integration environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4908	Defect	Closed	Brad Garrett	LOPS doesn't display metric results in Assay QC page if pipe.info.event contains metrics	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4899	Defect	Closed	Brad Garrett	LOPS marks the assay as 'Completed' with disposition = 'passed' instead of 'Failed' if the pipe info event contains DAQ	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4897	Task	Closed	Harris Shapiro	Missing Base Department for the "admin" user in some G64 environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4882	Story	Closed	—	Test Only - Promote Results to Source Array	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4872	Task	Closed	Deon Hughes	Correction of the remaining mis-entered reagent lot information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4862	Defect	Closed	Default User	Box with empty barcode is not displayed in the box list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4861	Task	Closed	Klead Fusha	Removal of the old version of the FRAG_MEDIAN metric ID from the current G64 environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4860	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4857	Task	Closed	Brad Garrett	Correction of mis-entered reagent lot information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4849	Story	Closed	Michael Livingston	Remove KIT-000108 from Seq Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4847	Defect	Closed	Brad Garrett	LOPS doesn't consume pipe status event if DAQ /PD job is completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4845	Defect	Closed	Klead Fusha	"Failed to process action 'ProcessResultAction'. Reason: Could not find load array config with name WGS qPCR Results in	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4844	Defect	Closed	Michael Livingston	Biomek requires padded well locations at Consolidation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4824	Task	Closed	Mikhail Terpugov	Add details for the deprecated tags for LOPS-3857 & LOPS-3858	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4805	Defect	Closed	Mikhail Terpugov	[WGS] qPCR Results Review - ReQuant: The Zone Data hasn't updated during uploading the second qPCR Results file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4797	Task	Closed	Swati Giri	G64 E2E Build 2 - E2E deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4795	Task	Closed	Swati Giri	G64 E2E Build 2 - Demo deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4684	Task	Closed	Alex Kalinichev	Sample creation for G64 E2E testing: Build 2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4683	Task	Closed	Alex Kalinichev	Sample creation for G64 E2E testing: Build 1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4572	Story	Closed	Brad Garrett	Add pool metrics for signateraWGSPairRunMetrics metric profile	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3920	Story	Closed	Mikhail Terpugov	Tapestation Results Review - Re-quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1965	Story	Closed	Brad Garrett	Test Only - Automatically launch Primer Design pipeline when assay request is received	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1964	Story	Closed	Brad Garrett	Receive Assay QC DAQ and PD Metrics	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 14 (29) (27 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4874	Task	Closed	Klead Fusha	Add the base department to the admin user in the DB in the patch deployment.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4843	Task	Closed	Klead Fusha	Database correction of NULL data set values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4842	Task	Closed	Brad Garrett	Cherry picking of critical production fixes for G64 E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4841	Task	Closed	Klead Fusha	Revert the changes from LOPS-4623 for G64 E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4839	Task	Closed	Brad Garrett	Anomalous plate-level sample QC failure at Library QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4838	Task	Closed	Brad Garrett	Create a branch for G64 E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4836	Task	Closed	—	Deployment issue on develop: "Schema being registered is incompatible with an earlier schema for subject "events.assay-r	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4820	Task	Closed	Mai Ton-Nu	Demo/UAT Support: 11/15/2024 Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4811	Defect	Closed	Klead Fusha	WGS Library Quant - Promote results to source array button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4796	Task	Closed	Brad Garrett	G64 E2E Build 2 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4793	Task	Closed	Brad Garrett	Manual remarrying of a set of G64 E2E samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4788	Story	Closed	—	Test Only - WGS tissue must have PRO0022275 instead of PRO0014905	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4778	Task	Closed	Kevin Detweiler	G64 E2E: Unable to enter TDNA plate run details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4769	Task	Closed	Klead Fusha	Refactor the blood extraction retest handlers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4762	Task	Closed	—	Regressin Run on MR for Launch into develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4738	Defect	Closed	Michael Livingston	Test Only: Re-queued blood samples must be included in the WGS blood extraction worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4728	Task	Closed	Brad Garrett	Manual propagation of the fix for LOPS-4698	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4711	Story	Closed	Klead Fusha	The system shall prevent boxes with duplicate barcodes from being created.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4701	Task	Closed	Swati Giri	Additional reagent lots & equipment for G64 E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4698	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4543	Story	Closed	Klead Fusha	Rework scenario from LOPS-1948	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4088	Story	Closed	Michael Livingston	Ensure input(s) are entered for tumor purity field(s) for Macrodissection	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3919	Story	Closed	Mikhail Terpugov	qPCR Results Review - Re-quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3856	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3815	Story	Closed	Klead Fusha	"Accept Partial" Action at Lib QC Review for blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1972	Story	Closed	Klead Fusha	Filler Samples assay templates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1922	Story	Closed	Brad Garrett	Update Pipeline Launch Request to support GHP Primer Design Assay Code for sending DAQ Job ID	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 13 (28) (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4689	Task	Closed	Mai Ton-Nu	Sample creation for G64 E2E testing: Build 1, Single Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4682	Task	Closed	Swati Giri	G64 E2E Build 1 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4681	Task	Closed	Swati Giri	G64 E2E Build 1 - Demo deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4678	Task	Closed	Catalin Parvana	G64 AV Testing - Generate LOPS Assay Disposition Messages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4655	Task	Closed	Swati Giri	Additional instruments to create in assorted G64 environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4625	Defect	Closed	Klead Fusha	Select Tissue Samples missing default values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4605	Task	Closed	Swati Giri	Create Test sample set in the GHP E2E Environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4603	Task	Closed	Swati Giri	Create Consumables for GHP E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4602	Task	Closed	Mai Ton-Nu	Demo/UAT Support: G64 Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4594	Defect	Closed	Brad Garrett	WGS - Unable to complete the LysisAndDecrosslinking step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4565	Task	Closed	Swati Giri	G64 E2E Build Zero - E2E deployment & Dry Run Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4546	Story	Closed	Michael Livingston	Record the equipment ID for Tapestation and qPCR	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4241	Tweak	Closed	Michael Livingston	Fix the description for Tissue tape station array method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4184	Task	Closed	Swati Giri	G64 E2E Build 1 - E2E deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4183	Task	Closed	Swati Giri	G64 E2E Build Zero - Demo deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4182	Task	Closed	Swati Giri	G64 E2E Build Zero - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4155	Task	Closed	Mikhail Terpugov	Replace generic WGS parameter lists with step-specific names	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1963	Story	Closed	Klead Fusha	Automatically launch WGS pipeline when sequencing is complete	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1953	Story	Closed	Klead Fusha	Finish Sequencing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1952	Story	Closed	Michael Livingston	Start Sequencing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1951	Story	Closed	Brad Garrett	Sequencing Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 12 (27) (22 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4587	Defect	Closed	Klead Fusha	HIstopathology. Pool samples error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4177	Defect	Closed	Brad Garrett	Tissue Tube Verification: An error related to samples appeared.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4168	Task	Closed	Klead Fusha	Apply WGS Pool Prep automatically when processing Consolidation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4156	Defect	Closed	Brad Garrett	Tissue Tube to Rack: Unable to Complete task due to required string "srctestmethod" is null or empty	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4138	Task	Closed	Klead Fusha	Consolidation and Pool Prep updates for happy path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4136	Defect	Closed	Brad Garrett	Tissue Deparaffinization .Error : Required String 'srctestmethod' is null or empty.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4113	Story	Closed	Mikhail Terpugov	Record WGS Blood Extraction Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4093	Defect	Closed	Brad Garrett	Restoration of G64-specific configuration deleted by the WES branch merge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4024	Defect	Closed	Klead Fusha	Absent KAPALibQuant - NAT-810164 validation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-4005	Task	Closed	Brad Garrett	Migrate NovaSeq X 25B Reagent Data from LV1.0 to LOPS GHP E2E environment for testing.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3959	Task	Closed	Mikhail Terpugov	WGS Library Quant QC Review: Accepting and pushing results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3906	Story	Closed	—	qPCR Results Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3860	Story	Closed	Mikhail Terpugov	Tapestation Results Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3855	Story	Closed	Michael Livingston	Blood Extraction QC Results Review: Action > Fail & Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3738	Story	Closed	Michael Livingston	Extraction QC Review: Actions > Re-Quant Plate (Blood, Tissue)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3683	Story	Closed	—	Start qPCR Plate Setup - Blood, Test only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2902	Story	Closed	Brad Garrett	Pool Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2521	Story	Closed	Klead Fusha	Process qPCR file for Library Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1949	Story	Closed	Klead Fusha	Finish Consolidation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1948	Story	Closed	Klead Fusha	Start Consolidation and Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1947	Story	Closed	Klead Fusha	Review combined Library Quant Results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1919	Story	Closed	Michael Livingston	Sequencing Master Data for WGS DAQ	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 11 (26) (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4028	Task	Closed	Ron Enson	Demo/UAT Support: G64 Sample Creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3985	Story	Closed	Klead Fusha	Array Status Rule after applying new Array Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3958	Task	Closed	Klead Fusha	WGS Library Quant QC Review: Master data, updates to current flow, new test methods, regrouping	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3934	Defect	Verified	Gianna Bell-Eunice	Blood Fragmentation error: required workItem 'WGS Fragmentation' version '1' available and applied	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3905	Task	Closed	Gianna Bell-Eunice	Creation of additional G64 demo samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3890	Story	Closed	Michael Livingston	Validate: Cannot Re-Quant Plate after Extraction QC Review is Completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3878	Defect	Closed	Michael Livingston	Active Array Method Description missing for WGS Tissue Tapestation v1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3867	Defect	Verified	Michael Livingston	Wrong order in Upload WGS Rundata dropdown	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3830	Defect	Verified	Hani Yakan	WGS G64 sample creation script error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3821	Story	Closed	Michael Livingston	Support "Accept Partial" Action for Blood Extraction DNA Plate at 'Extraction QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3734	Story	Closed	Michael Livingston	Extraction QC Review > Approve Plate: "Accept Partial" and Log Exception for Failed Tissue Sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3653	Story	Closed	—	Re-verification of the Blood Extraction workflow - Test-Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3614	Story	Closed	Michael Livingston	Tissue Extraction QC Results Review: Action > Fail & Re-Extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2543	Story	Closed	Mikhail Terpugov	Finish Tapestation Plate Setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2522	Story	Closed	Mikhail Terpugov	Process Tapestation file for Library Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-1945	Story	Closed	Klead Fusha	Finish qPCR Plate Setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

G64onLOPS Sprint 10 (25) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3872	Defect	Closed	Gianna Bell-Eunice	Fragmentation throws 'do not have the required workItem' error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3827	Defect	Closed	Mikhail Terpugov	AssayStatus and Disposition are inaccurate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3799	Defect	Closed	Ron Enson	References to WES in Quant 384WellPlate Blood	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3792	Defect	Closed	Ron Enson	wrong Run Detail Type(s) - WesBloodExtractionHeaders	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3791	Defect	Closed	Ron Enson	Absent Array Method Description after Blood extraction quantification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3682	Tweak	Closed	Brad Garrett	Finish Library Amp - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3680	Tweak	Closed	Brad Garrett	Start Library Amp - Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-3654	Story	Closed	—	Re-verification of the Pre-Amp workflow - Test-Only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)
LOPS-2839	Story	Closed	Brad Garrett	8-Tissue Re-Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-159)

LOPS Sprint 29 (64 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7163	Task	Closed	Brandon Culver	Add RSET Index Rebuild Job to sgNIPT LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7154	Task	Closed	Brandon Culver	Create RW and RO Database Users in sgNIPT LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7141	Task	Opened	Matt Smith	CLONE - Create RO Database User in LOPS Prod for Ariel	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4977	Tweak	Verified	Lev Evstratov	"QC Batches" tab is not present at "View Sample" page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4976	Defect	Closed	Lev Evstratov	"QC Batches" tab is not present at "Edit Sample" page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4975	Tweak	Verified	Lev Evstratov	"Arrays" tab is not present at "View Sample" page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4804	Task	Closed	—	Corrections needed for reagentclass for WES controls and primers in Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4794	Task	Closed	—	ReagentSync: NPE in the connector filter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-240)
LOPS-4792	Task	Opened	—	QC Batch List Page: Remove 'Racks Ready for Tube Verification' Filter in Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-242)
LOPS-4779	Task	Closed	Alex Pakhunov	Add HZN - San Carlos security department for sync with LV1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4776	Tweak	Closed	Alex Pakhunov	Add reagent sync mapping for reagent security departments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4772	Task	Closed	—	Run platform regression testing for M3 build	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4763	Task	Closed	Deon Hughes	Create user jachen in LOPS PROD	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4761	Story	Closed	Kevin Detweiler	Restrict the ability for the Instrument RO role to Add or Edit Instrument Notes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4760	Story	Closed	Kevin Detweiler	Update Hyperlinks on Tramlines	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4755	Task	Closed	Matt Smith	Create RO Database User in LOPS Prod for Ariel	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4741	Defect	Closed	Vasiliy Kumaev	Unable to Process Pipeline Done Message for DAQ due to Errors with Control UUIDs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4732	Task	Closed	Vasilii Sevriugin	Correct AWS Keys in Environment Variables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4729	Task	Closed	—	G64 - Updates for PD_ASSAY_APPROVAL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4725	Defect	Closed	Vasiliy Kumaev	Button "Rework Blood from Extraction" produces error: "An unexpected error occurred Caused by Failed to process action '	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4712	Task	Closed	Alex Pakhunov	AWS S3 G64 E2E Upload	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4630	Task	Closed	—	Run WES regression for launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4627	Story	Verified	Mikhail Makarin	Filter out ARM messages for non-LOPS assay codes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4610	Task	Closed	—	Create a branch for sgNIPT phase 2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4607	Defect	Closed	Brandon Culver	gDNA LR-PCR array methods test results cannot be promoted.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4597	Task	Closed	Ariel Jirau	Update strict-max-bean-instance-pool size from 50 to 200	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4596	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Error trying to push samples and fillers in the Deparaffinization step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4585	Story	Closed	Kevin Detweiler	Updates to Existing Jobtypes based on needed changes for ReadOnly jobtype	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4583	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Lib Quant QC Assay for Pre-Shakedown Plate (101924B-WLP2) was "Reviewed" without E-sign	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4579	Story	Closed	Kevin Detweiler	Additional Role configuration on Incidents related pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4578	Story	Closed	Kevin Detweiler	Additional Role configuration on the Consumables related pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4575	Story	Closed	Kevin Detweiler	Additional Role Configuration for Storage related pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4574	Story	Closed	Kevin Detweiler	Additional Role configuration for Test related Pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4571	Story	Closed	Kevin Detweiler	Role Configuration for Request related pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4569	Story	Verified	Lev Evstratov	Remove OOB field 'quantity' that is no longer in use on workitemchildsampleplan element on the test method maint page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4558	Task	Closed	Meghana Joshi	Refresh Post Launch Branch Into Develop and Correct Missing WES Functionality	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4545	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite original securitydepartment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4538	Task	Closed	Vasiliy Kumaev	Additional hard-coded reference to the "LIMS" schema	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4236	Task	Closed	Mikhail Makarin	SamRep Post-Launch: Remove accn 1.0 event consumption logic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4194	Story	Closed	Kevin Detweiler	Additional Role configuration on AQC Batches related pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4178	Task	Closed	Ariel Jirau	Configure VPC endpoint connectivity from lops-dev default vpc to natera nonprod kafka VPC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4175	Tweak	Closed	Isaac Vargas	Reagent Type creation for new reagents since data migration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4126	Tweak	Closed	Alex Pakhunov	Automatically set correct SamRep environment url during non-prod deployments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4103	Task	Closed	Matt Smith	Add RSET Index Rebuild Job to LOPS Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4100	Story	Verified	Vasiliy Kumaev	Provide Natera barcode on Load Array page and update scan to allow Natera Barcode	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4090	Task	Closed	Leonid Garin	Run regression test to verify k8s is working correctly. Dev part with LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4089	Task	Closed	—	Run regression test to verify k8s is working correctly with LOPS. SQE part	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4014	Story	Verified	Ize Imai	Remove the logic for exception sourceSystem and status in the Assay Complete message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4008	Story	Closed	Ron Enson	Reagents team needs ability to see the data entry button and enter results on samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3988	Task	Closed	Hani Yakan	Migrate the 'Grid with Params for Reagents IQC' Data Entry view from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3907	Defect	Verified	Ize Imai	The values under Exception block under events.labops.workflow.status.v1 are not correct.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3895	Story	Closed	Vasiliy Kumaev	Transaction Reprocessing Improvements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3874	Story	Verified	Lev Evstratov	Update QCBatchItemLookup to have ability to scan and display Natera barcodes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3781	Story	Verified	Lev Evstratov	Expand visible width for Transfer Method ID in LOPS UI	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3762	Story	Verified	Lev Evstratov	ARM transaction is Not Processed if If the Exception block contains an Exception Code that is not configured in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3756	Task	Closed	Valeria Vargas	Update the JBoss memory allocation for the PSPC and E2E environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3584	Task	Closed	Leonid Garin	Create API user for the RestAPI integrations with pipeline	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3229	Task	Closed	—	Create EPS Runbook for LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3227	Task	Closed	—	Disable Accessioning Message, Sample Management Event Message, and Deprecate the Jama Documentation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2996	Story	Verified	Ize Imai	Container type is unable to be associated with sample type for child sample plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2411	Story	Verified	Vasiliy Kumaev	The system shall have the ability to automatically create pooled samples after performing a required test	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2296	Task	Closed	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Task	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2295	Task	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Task	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-1983	Story	Closed	Kevin Detweiler	Read Only Job Type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 32 (37 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7162	Task	Opened	—	Provide SELECT Access to LabVantage Views for RO Database Role	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5249	Task	Closed	Deon Hughes	Update job type for Biodev and DataScience users to ReadOnly	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5228	Task	Closed	Vasilii Sevriugin	Update Web and Intf Image Tags for M4 Release	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5175	Task	Closed	Ize Imai	Knowledge share for dispose and rerun microdels	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5172	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5159	Task	Closed	Leonid Garin	Create a dedicated API user (BRIDGE)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5082	Task	Closed	Meghana Joshi	Add NtrClearCacheAction to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5081	Defect	Closed	—	Assay QC Failing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5077	Task	Closed	—	G64 Regression Testing - Serhii	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5071	Task	Closed	—	G64 Regression Testing - Shweta	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5070	Task	Closed	—	G64 Regression Testing - Mike N.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5051	Task	Closed	Ariel Jirau	Add Kubernetes workloads annotations to enable datadog logging	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4981	Defect	Closed	Meghana Joshi	Exceptions and Incidents Elements on the Assay view page are hidden from Lab Ops Operator job type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4901	Story	Verified	Mikhail Makarin	Illumina NGS - Set samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete messa	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4900	Task	Closed	—	Register v2 of Sequencing Run Complete message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4884	Task	Closed	Vasilii Sevriugin	Set Kafka Schema Validation Job to automatic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4881	Task	Closed	Lev Evstratov	Spike - Investigate sending matrix barcode through Reagent validation API	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4879	Task	Closed	Alex Pakhunov	Create a dedicated API user (LV 1.0)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4878	Task	Closed	Alex Pakhunov	Create API definition in swaggerhub (cfDNA from LV 1.0)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4846	Task	Closed	Leonid Garin	Spike: Optimize enterAndReleaseDataSets in the Sgnipt LRPCR/HybridCapture pipeline	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4835	Task	Closed	Leonid Garin	Optimize control data request for Pipeline Launch Request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4834	Task	Closed	Leonid Garin	Optimize sample data request for Pipeline Launch Request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4808	Story	Verified	Alex Pakhunov	Update logic for retriggering Pipeline Launch Request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4787	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (one topic)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4754	Task	Closed	Meghana Joshi	Provide SELECT Access to LabVantage Views for RO Database Role	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4753	Task	Closed	Leonid Garin	Update LOPS UI colors for Non-Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4708	Story	Verified	Vadim Gusev	Implement request conversion logic for LRPCR requests	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4702	Story	Verified	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Continue	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4169	Story	Verified	Lev Evstratov	Support Hybrid Capture (ASSAY-00043) Assay Request Messages with sequencingSampleReference	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3751	Story	Verified	Ize Imai	Support Assay Template specificity in Exception Logging	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3652	Task	Closed	Alex Pakhunov	Pre-requisite technical work to integrate with LV 1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3558	Story	Closed	Valeria Vargas	Create new Reflex Assay Request Handler for post-extraction assays where the sample that requires testing is not yet in	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3392	Story	Verified	Lev Evstratov	Display Natera barcode in QC Batch creation page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2309	Task	Closed	Ize Imai	Investigate if system can handle Assay Request Messages where there are a mix of SELECT, RETAIN, and ARCHIVE samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1551	Story	Verified	Lev Evstratov	NGS - Sequencing Run Complete Processing Code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1542	Story	Verified	Leonid Garin	PacBio LR-PCR - Sequencing Run Complete Processing Code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 25 (61 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7161	Sub-task	Closed	Brandon Culver	Check/Fix Load Balancer and Domain Issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7160	Sub-task	Closed	Matt Smith	Update Web Image Tag in Master	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7159	Sub-task	Closed	Brandon Culver	Deploy Base LOPS Web Stack to a local instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7158	Task	Closed	Brandon Culver	Install Base LV OOTB Database for sgNIPT LOPS Production	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7157	Task	Closed	Brandon Culver	Execute SQL and Configs Needed for LogMiner and Debezium	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7156	Task	Closed	Brandon Culver	Configure LOPS LV fileoutdir	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7147	Task	Ready for Development	—	Apply Missing Oracle Minor Version Fixes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7143	Task	Opened	Matt Smith	CLONE - Create New RO DB Role in Prod Database and RO Accounts for LOPS Team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-7134	Task	Opened	Matt Smith	CLONE - Apply Missing Oracle Minor Version Fixes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3922	Task	Closed	Klead Fusha	Prod / e2e Support	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3880	Task	Closed	Matt Smith	Deploy Verified WesX E2E Branch to Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3871	Task	Closed	Matt Smith	Create New RO DB Role in Prod Database and RO Accounts for LOPS Team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3869	Task	Closed	Matt Smith	Execute SQL and Configs Needed for LogMiner and Debezium	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3851	Sub-task	Closed	Matt Smith	Fix Load Balancer and Domain Issues	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3825	Story	Closed	Ron Enson	Update SOP ID and Description for Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3820	Sub-task	Closed	Matt Smith	Update Web Image Tag in Master	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3818	Sub-task	Closed	Matt Smith	Deploy Base LOPS Web Stack to Rancher Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3807	Story	Closed	Vasiliy Kumaev	Display sample barcodes for PD runs in Plates & Gels	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3803	Task	Closed	Ize Imai	Knowledge share reagent lot generation for E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3776	Task	Closed	Jose Valdivieso	Update LV TransProcessor Task to process Exclusively	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3771	Task	Closed	Matt Smith	Update Kafka Encryption Settings to Support DevOps Change	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3768	Task	Closed	Matt Smith	Apply Missing Oracle Minor Version Fixes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3767	Task	Closed	Matt Smith	Install Base LV OOTB Database for LOPS Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3765	Task	Closed	—	Validate the sample query provided to retrieve the starttime for histopathology steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3763	Task	Closed	—	Validate the sample query provided to retrieve createdt	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3740	Defect	Closed	Mikhail Makarin	Wes On X - Subsequent Test Methods are not being assigned to canceled Assay samples which blocks wf	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3715	Task	Closed	—	Configure Reagent sync in e2e env with RDS and MSK for sanity testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3701	Task	Closed	Hani Yakan	Finish Implementing PrimerMapLayoutSDC DTO and Util Classes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3694	Task	Closed	Ize Imai	Move instrument file from lv_Exported to patch_init	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3691	Story	Closed	Lev Evstratov	Updated security department when storing samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3684	Story	Closed	Lev Evstratov	Histopathology Lab Incidents - UI updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3675	Story	Closed	Vasiliy Kumaev	Incidents - Remove Approval Step for Incidents Created Without an Approval Workflow	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3642	Task	Closed	Swati Giri	LOPS 1.0.0.0 RC 4 deployment - E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3596	Story	Closed	Valeria Vargas	Primer Design - Add sample information to the Primer Design Assay QC UI and Reports	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3545	Task	Closed	Valeria Vargas	Create Dedicated Intf LOPS User for LV Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3536	Defect	Closed	Gianna Bell-Eunice	Сonverting units of measurement issue in the reagents Master Data.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3511	Story	Verified	Lev Evstratov	SPIKE - Auto-approve Datasets on reagent qualification when all results are passing.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3499	Defect	Closed	Ron Enson	The "Instrument Import" button does not work in the Instrument List from the LIMS Menu	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3495	Defect	Verified	Meghana Joshi	Update RackToPlate and Tissue DNA Extraction Processing to enter results for the Tissue Control and complete the dataset	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3483	Tweak	Closed	Leonid Garin	Update sample package to include sdiworkitemid	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3481	Tweak	Closed	Leonid Garin	Create array_result package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3480	Tweak	Closed	Leonid Garin	Update the sample_result package to add result data from sdidataitem	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3478	Task	Closed	Mai Ton-Nu	Consumable class assignment in LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3476	Tweak	Closed	—	Create a method for assigning approval type to all consumables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3450	Story	Closed	Alex Pakhunov	Add Assay QC package for DataMesh Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3376	Story	Verified	Ize Imai	Handle Short TNP Scenario where action.code = 'CANCEL' (and upversion to v1.18)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3342	Story	Verified	Ize Imai	Implement changes needed to redesign/refactor worklist generators/runlog parsers for sgNIPT	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3304	Story	Closed	Vladimir Piyanov	Handling assay request processing failures	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3226	Story	Closed	Vladimir Piyanov	Retrieve sample information from SamRep REST endpoint when Assay Request is consumed and persist sample info to LOPS DB	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3224	Story	Closed	Vladimir Piyanov	Persist request info from SamRep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2637	Story	Verified	Vasiliy Kumaev	Reagent Validation API	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2531	Story	Verified	Alex Pakhunov	Data Mesh - Implement Assay Information Package. Test only	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2479	Story	Closed	Mikhail Makarin	The system shall have the ability to list all derivative samples associated to the Parent Barcode	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2289	Defect	Closed	Vasiliy Kumaev	ToDoList‎ is not sorted	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2210	Defect	Closed	Valeria Vargas	Metric names are not sorted	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2209	Tweak	Closed	Valeria Vargas	Metric name doesn't fit within the "Metric" column width	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1556	Task	Closed	Ron Enson	Correct typos in "Fail Assay" error message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1384	Story	Closed	Alex Pakhunov	Data Mesh - Create a new service infrastructure and Sample Information Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1383	Story	Closed	Leonid Garin	Data Mesh - Equipment Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1368	Tweak	Closed	—	Create a method for migrating Reagents lot data from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-464	Task	Closed	Hani Yakan	Finish Implementing PrimerMapSDC DTO and Util Classes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 31 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7155	Task	Closed	—	Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in sgNIPT LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7142	Task	Opened	Matt Smith	CLONE - Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in LOPS Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5097	Task	Closed	Meghana Joshi	Create a new version of the M6 branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5078	Task	Closed	—	G64 Regression Testing - Nikolai	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5074	Task	Closed	—	G64 Regression Testing - Oksana	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5069	Task	Closed	—	G64 Regression Testing - Rufat	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5064	Task	Closed	Ariel Jirau	Investigate and fix issue with S3 bucket for Snowflake	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5031	Defect	Closed	Ize Imai	Sample - Manage - View/Edit Sample - Data Sets - "QC Batch ID" column should be sorted from most recent (top) to oldest	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5015	Story	Verified	Vasiliy Kumaev	cfDNA Library Prep Worklist Policy Configuration	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5004	Task	Closed	Alex Pakhunov	Bad image error in Kubernetes through the deploying Reagent Sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4993	Defect	Closed	Mikhail Makarin	DAQ Sequence Manifest is not using the latest Tumor Purity value.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4992	Defect	Closed	Lev Evstratov	Primer design sequencing manifest is not generated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4984	Task	Closed	—	GHP E2E Run1: Missing 21 LOPS_ASSAY_IDs in ASSAY_QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4947	Task	Closed	—	Run platform regression for M4	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4930	Task	Closed	—	GHP E2E Run 1: SOURCE_WORKITEM_ID is the same for Ext and LibPrep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4912	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into LOPS-G64-E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4892	Task	Closed	Alex Pakhunov	2 different control quants for 2376-TDNA and PSrework-WLP2	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-4891	Task	Closed	—	Incorrect Resultcode for Tissue Pre-SD and SD Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4888	Task	Closed	Kevin Detweiler	G64 - Investigate how to link the 3 Sequencing Runs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4822	Task	Closed	Meghana Joshi	Merge the WES-X M4 branch into Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4703	Tweak	Verified	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4672	Task	Closed	Mikhail Makarin	Support LV1 G64 user e2e testing during morning hours	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4623	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing (part 2)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4568	Task	Closed	Valeria Vargas	Investigate changes required to process tfmrd-methyl-no-tracers-v1 assay request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4544	Story	Closed	Alex Pakhunov	Reagent Sync: don't overwrite storage unit with null value	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4105	Story	Verified	Vasilii Sevriugin	Record Pipeline Job Status from Pipeline Launch API Response	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4104	Task	Closed	Matt Smith	Post-Deployment Steps for Setup of DB Trigger to Process Transaction Records in LOPS Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4037	Task	Closed	Vadim Gusev	Add module to receive results of pipelines via pipeline-result message (links only format)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4003	Task	Closed	—	G64 - Sample Disposition Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3967	Task	Closed	Stanislav Markus	Review Kubernetes Migration Code Provided by DevOps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3823	Story	Verified	Alex Pakhunov	Array and QC Batch information displayed on Sample Maint and Manage Test list pages	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3784	Story	Verified	Ize Imai	Display only first Sample Barcode in Sample Barcode column on QC Batch list page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3534	Story	Verified	Vasiliy Kumaev	Create API endpoint for RIR	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3533	Story	Verified	Vasiliy Kumaev	Provide RIR with file paths and other info	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2680	Task	Closed	Vadim Gusev	Pre-Requisite: sgNIPT alg sequence manifest contract is defined in swaggerhub	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2528	Story	Verified	Vasiliy Kumaev	Build Worklist Generation Policy and Processor Framework	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS Sprint 26 (57 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7153	Task	Closed	Brandon Culver	Execute Post-Install SQL Scripts for DB Setup and Configs	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7151	Sub-task	Opened	—	Remove DB Schema Name From Intf Setup SQL Script	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7150	Task	Closed	—	Create new Intf DB User and Set Permissions in LV Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7140	Task	Opened	Matt Smith	CLONE - Execute Post-Install SQL Scripts for DB Setup and Configs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-7138	Sub-task	Opened	Matt Smith	CLONE - Remove DB Schema Name From Intf Setup SQL Script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-7137	Task	Opened	Matt Smith	CLONE - Create new Intf DB User and Set Permissions in LV Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4078	Sub-task	Closed	Matt Smith	Remove DB Schema Name From Intf Setup SQL Script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4034	Task	Closed	Ariel Jirau	Test Running SQE Automation Script in LV Local	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4021	Task	Closed	Leonid Garin	Add User Created Date in LOPS.USERS data product	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4011	Task	Closed	—	ReagentSync: configure prod env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4010	Task	Closed	Alex Pakhunov	Reagent Sync: enable connectors in production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4009	Tweak	Closed	Alex Pakhunov	Reagent Sync: initial sync from LV1.0 to LOPS should only sync active reagents	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3987	Task	Closed	—	2 different EXT quants for the same casefile and TDNA plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3970	Task	Closed	Leonid Garin	Datamesh Production S3 bucket changes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3960	Task	Closed	Ariel Jirau	Document How To Use AWS Secretes Manager	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3947	Story	Closed	Mikhail Makarin	For Arrays/Plates, set security at the site level rather than the testing lab.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3944	Story	Closed	Mai Ton-Nu	Migration of Instrument-related Master Data Items from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3940	Task	Closed	Matt Smith	Disable the oob installed admin user account in the LOPS PROD environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3939	Task	Closed	Matt Smith	Create admin accounts for ENG and EPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3938	Task	Closed	Matt Smith	Disable data_migration_user account	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3937	Task	Closed	Matt Smith	Create data_migration_user account	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3932	Task	Closed	Ariel Jirau	Implement AWS Secrets Manager to Store LOPS Non-Production Passwords	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3927	Task	Closed	Meghana Joshi	CTA2 e2e Support	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3926	Task	Closed	—	Reagent Sync: switch log format to json	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3918	Task	Closed	Ron Enson	Add Integration Tag to Base IT Class	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3904	Task	Closed	—	Investigate if an Assay Complete message was sent for 01910adf-558c-7cc9-a256-b7329e67c72f in wes e2e env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3903	Story	Closed	Vladimir Piyanov	Update SamRep message processing to Measurement object optional	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3883	Defect	Closed	Vladimir Piyanov	Messages under events.labops.workflow.status.v1 topic are not generated for sgNIPT e2e short TNP scenario.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3881	Defect	Verified	Mikhail Makarin	Wes On X - Assay=canceled samples are included into Sequencing manifest	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3870	Task	Closed	Matt Smith	Create new Intf DB User and Set Permissions in LV Prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3868	Task	Closed	Matt Smith	Execute Post-Install SQL Scripts for DB Setup and Configs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3845	Task	Closed	—	Link original and re-sequenced samples to the same patient	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3802	Task	Closed	Valeria Vargas	Accurate Histopath Workflow Steps Information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3769	Task	Closed	Ariel Jirau	Implement AWS Secrets Manager to Store LOPS Production Passwords	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3760	Task	Closed	Mai Ton-Nu	Data Migration of Reagents and EQMT into LOPS PROD for Launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3720	Task	Closed	Leonid Garin	Sample Disposition Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3637	Task	Closed	Valeria Vargas	LOPS assay QC table is missing entries on control QCs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3636	Task	Closed	Alex Pakhunov	Primer design metrics assay disposition status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3635	Task	Closed	Mikhail Makarin	LOPS ASSAY_APPROVAL table needs date and user columns	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-172)
LOPS-3630	Task	Closed	Brad Garrett	Spike: Investigate effort to refactor and simplify 'Record Tissue DNA Extraction' stepion'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3625	Defect	Closed	Alex Pakhunov	Reagent-Sync connector is failing: ORA-01281: SCN range specified is invalid	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3576	Task	Closed	Leonid Garin	Create Inventory SQL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3568	Story	Closed	Alex Pakhunov	Data Mesh - Array Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3544	Task	Closed	Vasilii Sevriugin	Create Dedicated Intf DB User	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3506	Task	Closed	Alex Pakhunov	Configure a new staging MSK environment to validate integration of LOPS Data Mesh service with Redshift	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3497	Task	Closed	Alex Pakhunov	Document a procedure for rolling out the reagent/eqmt sync to production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3474	Task	Closed	Deon Hughes	Write query to exclude expired and consumed reagent lots and containers in LV1.0 so that they are not migrated over to L	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3446	Tweak	Verified	Valeria Vargas	Record Exception Code information to support improved Exception Code selection during different stages of the workflow	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3343	Story	Closed	Meghana Joshi	Platform - Update Test Methods for Re-Run Samples Scheduled for Blood Extraction/Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3261	Story	Closed	Alex Pakhunov	Create a python script for creating and delivering files to aws s3 bucket	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2806	Task	Closed	Ron Enson	Code refactor : Rename list page and task name	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2789	Task	Closed	Hani Yakan	Code cleanup : Remove duplicate getMaxDataSetIds	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1984	Task	Closed	Matt Smith	Setup LDAP for user authentication	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1493	Story	Closed	Alex Pakhunov	Instrument Sync to LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1382	Story	Verified	Leonid Garin	Data Mesh - Reagent Lot Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1171	Tweak	Closed	Olawale Dada	Assay List and Maint Page Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-774	Task	Closed	Lev Evstratov	Backward JSON Schema compatibility validation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 22 (25 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7152	Task	Closed	—	Finish Configuration of RDS SSL for TCPS Secure Connection	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7139	Task	Opened	Leonid Garin	CLONE - Finish Configuration of RDS SSL for TCPS Secure Connection	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3442	Task	Closed	—	Map steps between LV1 and LOPS for the IT analytics dashboard. Sequencing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3441	Task	Closed	—	Map step names between LV1 and LOPS for the IT analytics dashboard. Histo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3369	Task	Closed	Lev Evstratov	Move SQE Array Methods to Patch Init	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3263	Story	Closed	Vasiliy Kumaev	Support manual recovery for when assays are created but testing doesn't get assigned to source samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3244	Task	Closed	Lev Evstratov	Commit items found in e2e setup to repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3236	Defect	Closed	Lev Evstratov	Assay Element query on the Sample Maint and View pages not working for child samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3235	Story	Closed	Ize Imai	Update ARM message processing to set correct site and security department on samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3205	Defect	Closed	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3201	Task	Closed	Lev Evstratov	Review and Update Values Used for Log File Configs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3200	Task	Closed	Vasiliy Kumaev	Correct Issues and Variable Source for RDS Connection String	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3199	Task	Closed	Leonid Garin	Finish Configuration of RDS SSL for TCPS Secure Connection	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3195	Task	Closed	Ize Imai	Update SDC Sequence Update SQL Script and Deployment Location	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3190	Task	Closed	Vasiliy Kumaev	Update Patch Only GitLab Deployment Job to Fail on Error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3163	Task	Closed	—	Strategy for getting the needed contents of patch-init into production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3089	Tweak	Closed	Leonid Garin	LV should provide a filter to send Tissue POOLS back to Histopathology Re-Run from Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2985	Story	Closed	Valeria Vargas	Fix QC Batch Item Type for Controls in Derivative QC Batches	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2923	Task	Closed	Brandon Culver	Update CODEOWNERS permissions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2682	Task	Closed	Leonid Garin	Create NtrException Constructor with Exception as Input	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1996	Task	Closed	Vasiliy Kumaev	SPIKE: Investigate LOPS Web Container Frequent Crashing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1982	Story	Closed	Kersha Eddy	Reagent CLS Job type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1486	Story	Closed	Kersha Eddy	Add "Date placed in service" column to Instrument SDC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1443	Task	Closed	Lev Evstratov	Display "Environment is down for maintenance" to users during deployments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1303	Story	Closed	Brandon Culver	Create import process for creating reagent lot container trackitems	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 23 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7149	Task	Closed	—	Add RDS Certification File to Intf Service	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7145	Task	Closed	Brandon Culver	Configure base LOPS sgNIPT and integration Database users accounts	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7136	Task	Opened	Vasilii Sevriugin	CLONE - Add RDS Certification File to Intf Service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-7132	Task	Opened	Leonid Garin	CLONE - Requisition prod LOPS database password	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3502	Task	Closed	Valeria Vargas	Address Merge Conflict and Sync Launch Brand to Develop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3492	Defect	Closed	Matt Smith	Missing post-pipeline Kafka messages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3486	Defect	Closed	Vasiliy Kumaev	Update assay qc page config for "Pipe Analysis QC" to resolve page load error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3475	Defect	Closed	Valeria Vargas	LV_ReagentType is being populated in the linksdcid rather than Instrument on the vendoritem table linksdc when adding ve	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3473	Task	Closed	Vasilii Sevriugin	Add RDS Certification File to Intf Service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3471	Story	Closed	Kevin Detweiler	Remove the testing department on the query on the Choose Instrument window for datasets	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3464	Task	Closed	Vasiliy Kumaev	Logging - SapphireException thrown from BaseNateraAction loses stacktrace	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3453	Defect	Verified	Brandon Culver	Update ApplyChildSamplePlan‎ Event Plan to query against Assay AND WorkItem	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3444	Task	Closed	Leonid Garin	SQL query to retrieve a list of sample barcodes from ARRAY package in Snowflake	team: null
LOPS-3423	Story	Closed	Valeria Vargas	Update Well-Level Worklist Generators to include leading zero for single digit wells	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3409	Task	Closed	Vasiliy Kumaev	Create SQL for Assay QC Data for DataMesh Package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3408	Task	Closed	Klead Fusha	WESX-AV support LV-1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3403	Tweak	Verified	Ize Imai	Add exception codes that will be received in the Short TNP messages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3364	Story	Closed	Mikhail Makarin	Give users access to buttons/pages that support change of custody for samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3362	Defect	Closed	Lev Evstratov	Primer design sequencing manifest is not generated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3354	Story	Closed	Monish Grover	Support barcode scanning for equipment and reagents in the corresponding lookup windows	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3341	Tweak	Closed	Lev Evstratov	Update Volume Unit categories so they are available in Reagent Type configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3337	Story	Closed	Lev Evstratov	Creation of new fields/columns on the instrument needed for bulk equipment update.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3254	Task	Closed	Vasilii Sevriugin	Test and Confirm Multiple JBoss Servers and Correct Standalone File (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3225	Task	Closed	Vladimir Piyanov	Store SamRep Feature flags as a LabVantage Policies	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3221	Story	Closed	Vladimir Piyanov	Decrypt sample and kit barcodes received from SamRep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3036	Task	Closed	Alex Pakhunov	Create script to push datamesh data to S3 bucket	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2981	Defect	Verified	Ize Imai	Custom SDC Template Attribute keygen config not incrementing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2896	Story	Closed	Lev Evstratov	Bulk Equipment Update	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2686	Task	Closed	Alex Pakhunov	Reagent Sync App Deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2337	Task	Closed	Valeria Vargas	Remove Old Assay Code Field on Test Method SDC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2308	Story	Closed	Ize Imai	Handle short TNP Scenario: Assay Request Message containing action.code = 'ERROR' and samples.action.code = 'ARCHIVE'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2021	Task	Closed	Matt Smith	Setup database monitoring - E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1995	Task	Closed	—	Create NtrException Constructor with Exception	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1481	Story	Closed	Mai Ton-Nu	Updates to instrument page queries	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1367	Tweak	Closed	Brandon Culver	Create a method for migrating Reagent type data from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1366	Task	Closed	Brandon Culver	Create a method for migrating reagent lot track items from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1365	Task	Closed	Mai Ton-Nu	Create a method for migrating test methods from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1364	Task	Closed	Mai Ton-Nu	Create a method for migrating Parameter Lists from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1363	Task	Closed	Mai Ton-Nu	Create a method for migrating Parameters from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1362	Task	Closed	Mai Ton-Nu	Create a method for migrating Ref types from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1361	Task	Closed	Mai Ton-Nu	Create a method for migrating Container types from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1360	Task	Closed	Brandon Culver	SPIKE - Investigate and document the design plan for Refactor of worklist and rundata buttons to make execution product	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-1306	Story	Closed	Vasiliy Kumaev	Create import process for creation of Reagent lot trackitems	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1295	Task	Closed	Ize Imai	Spike - Confirm Retain sample logic following LOPS-1135 implementation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-841	Task	Closed	Leonid Garin	Requisition prod LOPS database password	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-698	Task	Closed	Lev Evstratov	Spike - Document the items required for Oracle Enterprise Installation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 24 (72 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7148	Task	Closed	—	Add RDS Certification File to Reagent Sync App	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7135	Task	Opened	Alex Pakhunov	CLONE - Add RDS Certification File to Reagent Sync App	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3844	Story	Closed	Alex Pakhunov	Additional Instrument fields synchronization LOPS to LV 1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-240)
LOPS-3742	Task	Closed	—	Need Post Extractions and Post Library Prep concentrations values for Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3719	Task	Closed	—	LOPS 1.0.0.0 RC 4 - Cherry picking of launch tickets, Round 2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3718	Task	Closed	—	LV.LOPS.ASSAY table ASSAY_STATUS field populated incorrectly for lab QC failing samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3696	Task	Closed	Lev Evstratov	Create a query to retrieve ENDTIME for rows 54,55.	team: null
LOPS-3679	Task	Closed	—	Should concordance metrics also be associated with matched normal sample?	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3676	Task	Closed	—	Link LOPS_SAMPLE_ID and LOPS_ASSAY_ID outside of ASSAY_QC table	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3673	Task	Closed	—	LOPS table ASSAY_APPROVAL: need date that a sample was dispositioned, user	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3668	Task	Closed	Alex Pakhunov	Data Package for runlog headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3663	Tweak	Closed	Vladimir Piyanov	Error not thrown when missing accessioningSourceSystem, accessionedBy, barcode or kitBarcode fields in samrep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3662	Task	Closed	Alex Pakhunov	Need Equipment and Reagents used at each WES workflow step from Histopath / Extractions to Sequencing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3659	Task	Closed	—	Map tissue barcode, casefileid given primer design pipeline launch request ID or assay request ID in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3648	Story	Closed	Vasiliy Kumaev	Update validations and remove e-signature from "Complete Assay QC" Button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3647	Defect	Closed	Lev Evstratov	Flaky: pipeline info message is not consumed due to a processing error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3645	Task	Closed	Vasiliy Kumaev	LOPS 1.0.0.0 RC 4 - Cherry picking of launch tickets	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3629	Defect	Closed	Mai Ton-Nu	Instruments Page - "SDITag failed to retrieve data!"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3626	Task	Closed	Leonid Garin	Row 7. Assay Workflow Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3623	Task	Closed	Alex Pakhunov	Fix SQL for Assay QC to address Primer Design QC missing data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3621	Task	Closed	Mikhail Makarin	Row 12. Result codes. E2E issue: VV 8/28/2024. Provide a list of LOPS exception codes and map them to LIMS codes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3620	Task	Closed	Leonid Garin	Row 12. E2E issue: HR 8/28/2024. SQL query for QC metrics changes is needed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3617	Task	Closed	Alex Pakhunov	Row 4. E2E issue: VV 8/16/2024. Join Kepler and LOPS data for DAQ job	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3611	Task	Closed	Valeria Vargas	Create a query to retrieve SEQUENCINGRUN data.	team: null
LOPS-3610	Task	Closed	Valeria Vargas	Create a query to retrieve RUNDATE.	team: null
LOPS-3609	Task	Closed	Mikhail Makarin	Rows 50, 51. Create a query to retrieve MODDT.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3608	Task	Closed	Mikhail Makarin	Create a query to retrieve MODBY.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3606	Task	Closed	Leonid Garin	Row 10. E2E issue: VV 08/28/2024	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3603	Task	Closed	Meghana Joshi	Refactor WesCreateSequencingPrepAction to Allow Extra Params	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3602	Task	Closed	Lev Evstratov	Create a query to retrieve ENDTIME.	team: null
LOPS-3601	Task	Closed	Lev Evstratov	Create a query to retrieve STARTTIME.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3600	Task	Closed	Lev Evstratov	Create a query to retrieve CREATEDT	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3599	Task	Closed	Mikhail Makarin	Row 7. E2E issue: HR SS 8/28/2024. Sample level metrics are missing from BATCH_QC table - continue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3598	Sub-task	Closed	Mikhail Makarin	Row 7. E2E issue: HR SS 8/28/2024. Sample level metrics are missing from BATCH_QC table	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3597	Sub-task	Closed	Valeria Vargas	Row 7. E2E issue: VV: 8/23/2024 Batch QC LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3582	Task	Closed	Mikhail Makarin	Add test method name from Kafka message to map step between LV1 and LOPS. Histo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3581	Task	Closed	Mikhail Makarin	Add a test method name from Kafka message to map step between LV1 and LOPS. Blood, Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3579	Task	Closed	Leonid Garin	Row 10. Tracking rejected sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3577	Task	Closed	Leonid Garin	Row 8. Investigate CONCENTRATION Values issue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3575	Task	Closed	Leonid Garin	Create Product Agnostic SQL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3542	Defect	Closed	Meghana Joshi	WES on X: Impossible to upload Ext Quant Rundata Results file for the tissue array, which has Cancelled sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3541	Defect	Closed	Meghana Joshi	WES on X: Impossible to upload Ext Quant Rundata Plating file for the array, which has Cancelled sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3540	Task	Closed	Matt Smith	LOPS 1.0.0.0 RC 3 deployment - E2E environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3539	Task	Closed	Valeria Vargas	LOPS 1.0.0.0 RC 3 deployment - PSPC environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3520	Story	Verified	Mikhail Makarin	Create a way to retrigger the Assay Complete message from the Assay list and maint page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3518	Task	Closed	Valeria Vargas	SPIKE - Reagent QC Samples must be able to go through a pendingapproval step and land on the Lots Pending approval list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3516	Task	Closed	Leonid Garin	Row 8. Investigate a mapping issues between Array and ARRAY_RESULTS tables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3514	Story	Closed	Valeria Vargas	New button for the LOPS Reagent Qualification Report on both the Active Lots and the Lots Pending Approval list pages.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3513	Story	Closed	Ron Enson	Add the a button to navigate to samples for review from consumable pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3512	Story	Closed	Gianna Bell-Eunice	Make the Expiry Date field mandatory on the LV_ReagentLotMaintPage	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3510	Task	Closed	Leonid Garin	Row 8. Decrease a number of samples returned in sample package	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3500	Story	Closed	Lev Evstratov	Add additional page queries to the Array List page for Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3489	Task	Closed	Alex Pakhunov	Add RDS Certification File to Reagent Sync App	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3477	Tweak	Closed	Mai Ton-Nu	Create a method for assigning quality sample test methods to consumables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3451	Story	Closed	Mai Ton-Nu	Migrate Instrument master data from from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3445	Task	Closed	Leonid Garin	SQL query to retrieve information array_barcode and assay workflow status from Snowflake	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3439	Story	Closed	Vasiliy Kumaev	Wes On X: QC Review - Accept Partial action doesn't release quant result datasets & TM doesn't get completed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3430	Task	Closed	Alex Pakhunov	Update Kafka serializer from Avro to JSON	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3422	Task	Closed	—	Update information for IT dashboard	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3421	Task	Closed	Alex Pakhunov	Configure a pipeline for a new Data Mesh service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3368	Task	Closed	Brandon Culver	Update CODEOWNERS permissions for sgNIPT devs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3359	Story	Closed	Vasiliy Kumaev	Automatically send completed assay qc arrays with no metric failures to historical tramstop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3256	Defect	Closed	Vasiliy Kumaev	Potential race condition with 'New Sample Created' events	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3255	Defect	Verified	Valeria Vargas	Potentially spurious Accessioning Site name mismatch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3250	Defect	Closed	Mikhail Makarin	Duplicate sample IDs being shown after extraction quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3223	Tweak	Closed	Vladimir Piyanov	Use OKTA authentication to call SamRep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3216	Task	Closed	Vasiliy Kumaev	Investigation of the WES Capture PCR Cleanup "dummy" parameter	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1890	Task	Closed	—	EQMT Management SOP Update	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1008	Task	Closed	Ron Enson	Display External ID field on List and Maint pages for Product Config governed SDCs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1003	Tweak	Closed	Ron Enson	Update SQL Used in "By Array Method" LV Query	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-377	Task	Closed	Vasilii Sevriugin	Spike Task - Investigate what Kafka security settings we are required to have according to Natera policies and standards	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-56	Task	Closed	Leonid Garin	Transaction Table Purging Completed Messages and Time Retention	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 28 (61 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7146	Task	Closed	—	Export all users from LOPS PROD and import into sgNIPT LOPS DB	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7133	Task	Opened	Valeria Vargas	CLONE - Spike - Document the tasks required to complete the production environment installation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4858	Task	Closed	Brandon Culver	Remove Category and Role exports from Natera LV_ReagentType Custom Export Script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4752	Defect	Closed	—	2 Pipe Job ID and 2 Pipe Job Status records created after Pipeline Info message is received and processed successfully	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4705	Task	Closed	—	Assay QC metrics - generate LOPS workflow status event in G64 AV env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4688	Task	Closed	—	Run regression for M2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4685	Task	Closed	—	Run regression for hotfix2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4659	Task	Closed	Deon Hughes	Create user account in LOPS PROD for Justin Jones	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4658	Defect	Closed	Valeria Vargas	Error message received when selecting reagent container with status In-line Valid	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4657	Task	Closed	Deon Hughes	Create child instruments for novaseq X	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4632	Task	Closed	—	Run WES regression for launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4631	Task	Closed	—	Run WES regression for launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4629	Task	Closed	—	Run WES regression for launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4628	Task	Closed	—	Run WES regression for launch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4622	Task	Closed	Mikhail Makarin	Cherry pick tickets for LOPS M2 (1.0.2.0)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4619	Task	Closed	Deon Hughes	Create NR0815 reagent in LOPS PROD for reagent sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4618	Task	Closed	Deon Hughes	Create NR0826 reagent in LOPS PROD for reagent sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4616	Task	Closed	Deon Hughes	Create NR0823 reagent in LOPS PROD for reagent sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4604	Defect	Closed	Meghana Joshi	Wes on X: Assay QC - Can't send Blood samples to rerun from BE	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4584	Task	Closed	Matt Smith	Create a new branch for M2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4581	Task	Closed	Matt Smith	Give RO access to LOPS db	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4576	Tweak	Closed	Alex Pakhunov	Missing/inaccessible "Close Incident" button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4566	Task	Closed	Brandon Culver	Update LV_CrossSDICalcDef and ParamList SDC export scripts to pull Inter SDI Calcs in ParamList exports	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4559	Defect	Closed	Vladimir Piyanov	Primer Design ARM request was not processed with error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4555	Defect	Closed	—	SEQ Manifest failing with ARJUNA016053 error	team: null
LOPS-4554	Task	Closed	Isaac Vargas	Disable the reagent expiry tasks	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4553	Task	Closed	Deon Hughes	Create admin account for Harris and Swati	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4551	Task	Closed	—	Assess whether M1 branch supports ARM messages produced against v 1.18	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4541	Defect	Closed	Kevin Detweiler	WES-X During Child Sample creation, page would get stuck while it saved	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4539	Task	Closed	—	Provide LOPS Access to Ryan Casillo and Amelaine Almacen	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4238	Task	Closed	—	Provide LOPS Access to ENG resources	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4223	Task	Closed	Matt Smith	Create RO User for DataMesh DMS Service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4198	Task	Closed	Mikhail Makarin	SamRep Post-Launch: Move RestClientPolicy to lv_exported_init	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4197	Sub-task	Closed	—	Include labvantagedoc.war to labvantagehome_installed.zip v LV8.8.0 (LOPS project)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4192	Story	Closed	Kevin Detweiler	Additional Role configuration on samples pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4191	Story	Closed	Kevin Detweiler	Create additional Roles	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4190	Defect	Closed	Kevin Detweiler	Primer design sequencing manifest is not generated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4181	Task	Closed	Alex Pakhunov	Spike - Issues related to Reagent Sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4180	Task	Closed	Valeria Vargas	Spike Pre-requisite Technical work for Boxes and Packages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4129	Story	Closed	Ron Enson	Create a new button on Consumable-related pages.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4121	Task	Closed	Vasiliy Kumaev	Remove the Accessioning schema from being registered as part of LOPS deployments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4068	Defect	Closed	Meghana Joshi	Dispositioned Assays get their status updated from Completed to InProgress	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4049	Story	Verified	Ize Imai	Update Exception SDC to include sourceSystem and status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4048	Task	Closed	Leonid Garin	Cherry pick LOPS-3216 into the WES-X launch branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4023	Story	Verified	Ize Imai	Include sourceSystem and status for Exceptions generated in LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3950	Story	Closed	Lev Evstratov	Support Assay Request Messages with ERROR or CANCEL action codes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3852	Task	Closed	Vasilii Sevriugin	Review and Correct Problematic Errors from Web Container Logs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3790	Defect	Closed	Leonid Garin	Primer Design ARM request v1.18 is not processed successfully	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3782	Story	Verified	Hani Yakan	Update SampleTypeTmPlateLoad query in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3775	Task	Closed	—	Run regression test for WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3774	Task	Closed	—	Run regression test for WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3773	Task	Closed	—	Run regression test for WES	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3722	Tweak	Verified	Brandon Culver	View Samples created in Array on SampleList page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3535	Task	Closed	Vasiliy Kumaev	Create API definition in swaggerhub	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3501	Task	Closed	Leonid Garin	Include LabVantage manual/vendor documentation in the production env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3323	Story	Closed	Leonid Garin	Replace lvtransprocessor scheduled task with a db trigger to handle transaction processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2612	Task	Closed	Leonid Garin	Sequencing Run Complete - Set up new topic for lr-pcr (PacBio)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2242	Story	Closed	Kevin Detweiler	Update the LIMS Menu for Read-Only Jobtype	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1491	Story	Closed	Ron Enson	Decommissioned Instruments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1037	Story	Verified	Vasiliy Kumaev	Implement Reflex Assay logic in the ARM Message Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-699	Task	Closed	Valeria Vargas	Spike - Document the tasks required to complete the production environment installation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 20241230 (33) (50 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5330	Task	Closed	Klead Fusha	Cherry picking LOPS-5269 into LOPS 1.1.0.1 (Hotfix 6)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5326	Task	Closed	—	Final automated testing for the LOPS 1.1.0.1 release candidate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5324	Defect	Closed	Klead Fusha	Problems with an extraction re-quant button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5308	Task	Closed	Kathy Dao	Investigate how to associate cfDNA FFE control thresholds to control lots in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5304	Task	Closed	Mai Ton-Nu	New computer setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5303	Task	Closed	Mai Ton-Nu	New computer setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5302	Task	Closed	Mai Ton-Nu	New computer setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5282	Task	Closed	Olawale Dada	Remove non-breaking spaces pt. 2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5279	Task	Closed	—	Fix memory killed error on python script to export db data to s3	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5270	Task	Closed	Michael Livingston	Update Primer Plate Map Standard export script to have "Natera" prefix	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5268	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 17 (33)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5259	Task	Closed	—	Merge M3 items to Production in Jama	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5252	Task	Closed	Leonid Garin	Merge missed MR for LOPS-3935 into LOPS 1.1.1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5229	Task	Closed	Mikhail Makarin	Add Missing Changes from LOPS-4236	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5214	Defect	Verified	Gianna Bell-Eunice	"Size Multiplier" is not populating for "sgNIPT gDNA CFTR LR-PCR Quantification" array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5211	Task	Closed	Meghana Joshi	Update System Config Setting for Performance Stats as Part of Deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5208	Task	Closed	—	Create a gitlab project to maintain labworkflows datamesh code assets	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5207	Tweak	Verified	Lev Evstratov	Update Assay Templates to set "Template Type" as a mandatory field	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5204	Story	Verified	Gianna Bell-Eunice	cfDNA Sequencing Run Complete RunDetails addition, gDNA Seq Run update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5164	Defect	Closed	Lev Evstratov	Transaction Type form is crashed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-5152	Story	Verified	Laura Dietrick	gDNA Group Test method reorganization Update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5150	Story	Verified	Krishna Tanuku	Update to resolve issue seen for recalc retrigger on cfDNA Pool Quant array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5145	Story	Verified	Monish Grover	Updates to gDNA Library Prep Test methods, parameter List and Array Methods	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5139	Story	Verified	Kathy Dao	Configure Verso Freezer StorageUnitType	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5114	Story	Verified	Krishna Tanuku	gDNA Sequencing Run Complete RunDetails Test method and PL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5109	Story	Verified	Monish Grover	gDNA LR-PCR Pool Purification array method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5105	Story	Verified	Krishna Tanuku	Updates to cfDNA sequencing done complete message	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5075	Task	Closed	—	G64 Regression Testing - Petar	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5072	Story	Closed	Kevin Detweiler	WES: 'Lab Ops' User Access to QC Report (Test Only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5068	Story	Verified	Vasiliy Kumaev	Build Generate Worklist on Box List page for Library Prep End Repair	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5059	Story	Verified	Monish Grover	Update to Pool Dilution array transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5054	Story	Verified	Laura Dietrick	Updates to cfDNA barcode primer plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5046	Story	Verified	Krishna Tanuku	Update name and description for LibPrep Quant to PostLib Quant test method, param list, spec	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5009	Task	Closed	—	G64 Launch Build 1 - Demo deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-5007	Task	Closed	—	G64 Launch Build 1 - PSPC deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4978	Defect	Closed	Meghana Joshi	On array list pages, the Sequencing By Patient Sample Identifier query does not work for tissue samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4932	Story	Verified	Krishna Tanuku	Array Methods Update from Result parameter to Complete? for all cfDNA downstream workflow steps as needed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4902	Story	Closed	Vasilii Sevriugin	Deduplication of Kafka messages (more than one topic)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-4679	Task	Closed	Matt Smith	Create user account in LOPS prod	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4668	Defect	Verified	Swati Giri	Wes On X: Capture QC Review: Reject - QC Pass Pool samples have WESSequencingPrepWorkflow TM assigned	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4624	Story	Verified	Gianna Bell-Eunice	LR-PCR Quantification array method Calculation Updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4612	Story	Closed	—	gDNA extraction quantification worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4224	Tweak	Verified	Isaac Vargas	WES: Display Expiration Date for Selected Reagent	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4174	Story	Verified	Vadim Gusev	Implement integration module with PIPE API Server	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4112	Story	Verified	Olawale Dada	Update gDNA Sequence Pool Dilution TM, PM, and Array Method to "sgNIPT gDNA Pool Dilution"	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4101	Story	Verified	Laura Dietrick	gDNA LR-PCR Primer plate setup (HBA)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4026	Story	Verified	Laura Dietrick	cfDNA Master Mix part number set up (MM0004-MM0008)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3933	Story	Verified	Lev Evstratov	Update the current query NtrQCBatchSelectExisitingBatch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3914	Task	Closed	Vasilii Sevriugin	Create Troubleshooting Guide for Intf Service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-3594	Story	Closed	Valeria Vargas	LOPS configuration required for LV Boxes and Packages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)

LOPS tfMRD Sprint 6 (32) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5128	Task	Closed	Jonathan Quinn	JQ - Design and support tasks (sprint 6)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS tfMRD Sprint 5 (31) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4986	Task	Closed	Jonathan Quinn	JQ - Design and support tasks (sprint 5)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS Sprint 30 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4950	Task	Closed	—	Update helm configuration to fix development LabVantage db persistence	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4929	Task	Closed	Isaac Vargas	Resolve merge conflicts for Consumable Types	team: null
LOPS-4918	Task	Closed	Ron Enson	RE - Ticket for "big merge" review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4917	Task	Closed	Hani Yakan	HY - Ticket for "big merge" review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4898	Task	Closed	Vasilii Sevriugin	Cloud config for LV Labworkflows-Pipeline-Integration REST policy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4866	Task	Closed	—	Investigate why some samples in Production env are showing up as part of the San Carlos depts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4856	Task	Closed	Deon Hughes	Add San Carlos site to users	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4821	Task	Closed	Meghana Joshi	Merge the WES-X Post-Launch P1 branch into M4	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4809	Story	Verified	Ize Imai	Refactor u_sourcesystem to u_ntrsystem	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4733	Task	Closed	Mikhail Makarin	Review and Correct DataDog Errors	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4709	Story	Verified	Vadim Gusev	Implement request conversion logic for Algs requests	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4633	Story	Verified	Brandon Culver	Update sgNIPT Plate Worklist Task button to use new worklist policy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4606	Story	Closed	Alex Pakhunov	Reagent Sync: Unit conversion	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4592	Defect	Closed	Meghana Joshi	Assay QC - "Number of Samples" value includes filler samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4549	Story	Closed	Ron Enson	Add 'General' consumable class	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4149	Story	Closed	Ron Enson	Add Natera Lot Number column to the LV_ReagentSampleList page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4065	Task	Closed	Ariel Jirau	Develop PoC Terraform code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3875	Story	Verified	Lev Evstratov	Update QCBatchdataentry>Detail Panel to include Natera Barcode or add Natera barcode directly on page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3081	Defect	Closed	Meghana Joshi	Passed Blood Samples are Allowed to be sent for Rework, missing validation.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2615	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for NGS metric output json and add to Swaggerhub	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2614	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for sgNIPT algorithm metric output json and add to Swaggerhub	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2611	Task	Closed	Leonid Garin	Illumina NGS Sequencing Run Complete - Set up new topic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2313	Task	Closed	Vadim Gusev	Pre-requisite: Define contract for lr-pcr PacBio metric output json and add to Swaggerhub	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

LOPS tfMRD Sprint 4 (30) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4211	Task	Closed	Jonathan Quinn	JQ - Design and support tasks (sprint 4)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

tfMRD Sprint 3 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4210	Task	Closed	Jonathan Quinn	JQ - Design and support tasks (sprint 3)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS tfMRD Sprint 2 (28) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4209	Task	Closed	—	JQ - Design and support tasks (sprint 2)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

tfMRD Sprint 1 (LOPS 27) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4208	Task	Closed	—	JQ - Design and support tasks (sprint 1)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-4087	Task	Closed	Hani Yakan	Onboarding support	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)
LOPS-3964	Story	Closed	Ron Enson	Isolation test method and param list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-273)

LOPS Sprint 27 (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4170	Task	Closed	Alex Pakhunov	Reagent Sync: update helm chart to get rid of istio proxy.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4166	Task	Closed	Alex Pakhunov	Reagent Sync: set default labops topic retention to 2 weeks	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4162	Task	Closed	—	Create new branch for M1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4143	Task	Closed	Matt Smith	Update s3 location for prod data mesh	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4141	Task	Closed	Alex Pakhunov	lv-reagent-synchronization-datasource connector fails in prod	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-4132	Task	Closed	Kathy Dao	KD - Ticket for creation of PSPC Phase 2 process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4131	Task	Closed	Ariel Jirau	Develop quick guide documentation for Kubernetes local environment setup and basic use	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4124	Task	Closed	Ariel Jirau	Deploy PoC EKS on existing lops-dev account VPC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4123	Task	Closed	Vladimir Piyanov	Cherry pick changes for LOPS M1 release with ARM preview	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4120	Story	Verified	Ron Enson	Add 'Tracer' to the Reagent Class reftype	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4118	Story	Verified	Ron Enson	Add the button configured in LOPS-3513 to additional consumable list pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4117	Task	Closed	Ariel Jirau	Develop quick guide documentation for Gitlab & Terraform integration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4114	Task	Closed	Alex Pakhunov	Transform security department during sync from LOPS to LV1.0 and LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4107	Story	Verified	Hani Yakan	Create LV1.0 users that are not going to exist in LOPS as users in LOPS with a de-activated status.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4106	Task	Closed	Ize Imai	Knowledge share for action archiving files in shared drive	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4085	Task	Closed	Matt Smith	Deploy the WesX Launch Branch to LOPS Production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4047	Epic	Closed	Ariel Jirau	Configure Gitlab Keyless Access to AWS Dev Account	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4030	Task	Closed	Hani Yakan	E2E Plate data extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4017	Story	Closed	Ron Enson	Add u_commonname back to the instrument sdc	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-4007	Task	Closed	Lev Evstratov	Access Run Data Processing Code and Policy for Master Data Versioning	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3952	Task	Closed	Hani Yakan	Python script to automate LabVantage user account creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3925	Task	Closed	Vasilii Sevriugin	Create New Repo For Pipeline Integration Connector	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3764	Task	Closed	Leonid Garin	Validate the sample query provided for validation complete date (tissue sample)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3583	Task	Closed	Vasiliy Kumaev	Create a dedicated API user for the RIR endpoint	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-3498	Task	Closed	Alex Pakhunov	Enable datadog monitoring for reagent/eqmt sync in production	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2891	Task	Closed	Meghana Joshi	Address WorkItemDbUtil.getParamLists query and usages that's not accounting for workItemVersions other than 1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2505	Task	Closed	—	Set up connection to Pipeline's Rest API for pipeline integration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1884	Defect	Closed	Olawale Dada	Wes on X: QC Batch: Data Entry: Return button returns to QC Batch List page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1670	Story	Verified	Vasiliy Kumaev	Implement way to Disposition Wet Lab Only Assays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1449	Task	Closed	Lev Evstratov	Assess robustness of paramlist auto-upversioning and how that interacts with patching/deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1329	Story	Closed	Mai Ton-Nu	Review reagents data in LV1.0 / LOPS after sync is enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-961	Story	Closed	Meghana Joshi	Historical Reviews	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-856	Task	Closed	Leonid Garin	Add RSET Index Rebuild Job to Maintenance Release Pipeline	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 21 (42 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3194	Task	Closed	Mai Ton-Nu	Create list of mapping of all foreign keys associated to TestMethod SDC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3193	Task	Closed	Mai Ton-Nu	Create list of mapping of all foreign keys associated to Instrument SDC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3192	Task	Closed	Kersha Eddy	Create list of mapping of all foreign keys associated to Reagent Lot	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3191	Task	Closed	Kersha Eddy	Create list of mapping of all foreign keys associated to Reagent Type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3154	Task	Closed	Vasilii Sevriugin	Unable to send Kafka messages in the LOPS UAT sandbox environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3122	Story	Closed	Lev Evstratov	Update policy controlling Reagent Container barcodes to remove kit	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3094	Tweak	Closed	Valeria Vargas	Update the events.accessioning.sample.info.v1 topic for additional properties for Bridge	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3066	Tweak	Verified	—	Commit Reagent array method to repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3045	Task	Closed	Lev Evstratov	DevTools Script to Complete WES Blood Extraction Quant Workflow Step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3004	Task	Closed	Ize Imai	DevTools Script to Setup WES Tissue Extraction Workflow Step - Tissue Block	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3003	Task	Closed	Lev Evstratov	DevTools Script to Complete WES Blood Extraction Workflow Step	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2995	Defect	Closed	Krishna Tanuku	Container crashes with System Memory Dump in some Child Sample Creation scenarios	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2990	Defect	Closed	Monish Grover	Fix Assay Element query on the Sample Maint and View pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2989	Task	Closed	Krishna Tanuku	Add missing departments to the Admin user	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2965	Task	Closed	Vasilii Sevriugin	Create Integration Test for Wes Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2964	Story	Closed	Krishna Tanuku	Consumable Class is mandatory when creating a new Consumable Type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2936	Story	Closed	Leonid Garin	Rework Blood from Extraction: Update Validations and Fix Error Message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2920	Tweak	Closed	Vasiliy Kumaev	Test Only: Rework Incident Template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2915	Task	Closed	Vasiliy Kumaev	Update the UUIDs generated in LOPS to be in v7 format instead of v4	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2881	Story	Closed	Vasiliy Kumaev	OOTB rejectPlate() Rejects the first dataset, instead of the last	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2841	Story	Closed	Krishna Tanuku	Equipment ID generation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2645	Story	Closed	Valeria Vargas	Assay Maint Page Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2642	Task	Closed	Lev Evstratov	Refactor/extend the gen_runlogs script to support other products	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2573	Task	Closed	Deon Hughes	Draft sql queries for all packages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2381	Story	Closed	Brandon Culver	Display Reagent Container barcodes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2374	Story	Closed	Leonid Garin	The system shall have the departmental security defined on the required SDCs.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2363	Tweak	Closed	Lev Evstratov	E-Signature Capture During Dataset Approval/Rejection for Controls in Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2326	Task	Closed	Mikhail Astafev	setting default KEH on k8s not in Rancher anymore	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2054	Task	Closed	—	Add and configure all Valid Assay codes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1650	Task	Closed	Ize Imai	The system shall have the ability to receive SOS Kafka message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1490	Story	Closed	Mai Ton-Nu	Record equipment information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1489	Story	Closed	Mai Ton-Nu	Create a method for identifying and filtering by work order due date range and overdue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1415	Story	Closed	Mai Ton-Nu	RND EQP - Equipment categorization for filtering / searching	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-999	Story	Closed	Alex Pakhunov	Implement the ability to sync incident id from LOPS to LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-998	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot data from LOPS to LV1.0 and LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-728	Story	Closed	Alex Pakhunov	Reagent lot Container Trackitem Sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-727	Sub-task	Closed	Chris Lott	Update the processor to include reagent lots	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-722	Story	Closed	Alex Pakhunov	Implement the ability to sync Reagent Lot data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-713	Task	Closed	Brandon Culver	Spike - Investigate and document plan for remaining consumable barcodes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-681	Sub-task	Closed	Chris Lott	Create the database objects necessary to sync workflow created reagent lots from LV1.0 to LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-680	Sub-task	Closed	Chris Lott	Create the database objects necessary to sync reagent lots from LOPS to LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-608	Story	Closed	Monish Grover	LOPS Reagent Qualification Report	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 20 (27 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3172	Defect	Verified	Lev Evstratov	Workitem status "Initial" does not change if assay was cancelled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3164	Task	Closed	Vasiliy Kumaev	Update Web Container Scripts for RDS Connection URL Params	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3160	Defect	Verified	Leonid Garin	The assay can not be failed in edit assay page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3107	Task	Closed	Leonid Garin	Set Job Types to Have Default Menu and URL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3106	Tweak	Closed	Leonid Garin	Fix Calculation Rule on Pathologist Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3044	Defect	Closed	Valeria Vargas	WES on X must fix for e2e: Assay QC Control Analysis Review page comes up empty	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3038	Defect	Closed	Valeria Vargas	Jasper Reports for Controls are not opening correctly	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3001	Task	Closed	Hani Yakan	Implement Argument Overrides for DevTools Workflow Script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-3000	Task	Closed	Hani Yakan	Add and Use New Timestamp Util Functions in a LV Accepted Format	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2991	Sub-task	Closed	Hani Yakan	wes_workflow_setup.py figure out which arguments for override	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2980	Sub-task	Closed	Hani Yakan	wes_workflow_setup.py config directory to the path	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2978	Story	Closed	Lev Evstratov	The error message when apply "Fail Assay" for assay with InProgress status in Sample Analysis Review page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2976	Task	Closed	Matt Smith	Create Base DevTools Scripts to Support WES Blood Extraction Data Setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2930	Defect	Closed	Lev Evstratov	Unable to Cancel WorkItems due to SDIWorkItem SDC Audit Config	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2928	Defect	Verified	Monish Grover	Controls are not displayed in Wes DAQ Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2909	Task	Closed	Matt Smith	Add Support for Kafka on MSK	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2846	Defect	Closed	Lev Evstratov	QNT1 plate samples list contains double instances of samples and the second instance is unavailable	team: null
LOPS-2829	Task	Closed	Kathy Dao	Sample Management, Histopathology and Security Support	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2676	Tweak	Closed	Olawale Dada	Add new departments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2457	Story	Closed	Ize Imai	Refactor "Use Retain Sample" functionality	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2038	Tweak	Closed	Kevin Detweiler	Configure roles to Reagent related pages and update existing job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1978	Story	Closed	Kevin Detweiler	Add Reagent Job types and update existing job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1976	Story	Closed	Jonathan Quinn	Create LabOps Operator and LabOps Manager	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1667	Story	Closed	Laura Dietrick	Create Extraction Manager and Extraction Operator job type	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1000	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot trackitem data from LOPS to LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-800	Task	Closed	Vasilii Sevriugin	Remove Unused Legacy Code in Sprig Boot INTF Service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-494	Defect	Closed	Valeria Vargas	Unable to send status message on Applied flag set to 'Y'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 19 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3020	Task	Closed	Matt Smith	Update Centos Download Mirror on Build Scripts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2895	Story	Closed	Leonid Garin	Updates to early assay termination logic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2845	Defect	Closed	Valeria Vargas	Error accessing Jasper reports	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2830	Task	Closed	Kathy Dao	Support Security and Onboarding	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2828	Task	Closed	Kathy Dao	Sample Management Support and Onboarding	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2817	Story	Verified	Vasiliy Kumaev	Fix issue with re-uploading quant rundata	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2759	Story	Closed	Leonid Garin	Support bulk restart from extractions for WES in Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2758	Story	Closed	Vasiliy Kumaev	Support Tissue Rework from Histopathology in Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2757	Story	Closed	Vasiliy Kumaev	Array Genealogy Page updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2679	Task	Closed	Mai Ton-Nu	Create equipment categorization strategy and spreadsheet	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2674	Story	Closed	Leonid Garin	Update Sequencing Run Complete Message to Complete Sequencing Test Method on Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2624	Task	Closed	Lev Evstratov	Add uL unit converstion to mL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2583	Story	Closed	Vasiliy Kumaev	Update "Accept Partial" action during Array QC Review to set array status to "Reviewed"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2566	Defect	Closed	Valeria Vargas	Assay IDs are not getting copied to the new workitems assigned to the tissue gDNA samples that are created after extract	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2478	Defect	Verified	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2349	Story	Closed	Kevin Detweiler	Validate equipment location	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2271	Defect	Closed	Valeria Vargas	Jasper report: update color coding thresholdFlag = PASSED_WITH_WARNINGS to red	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2241	Tweak	Closed	Olawale Dada	Configure roles to QC Batch related pages and update existing job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2028	Story	Closed	Lev Evstratov	Display the product config ID and name in Assay QC UI for the control sample types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2009	Tweak	Closed	Jonathan Quinn	Configure roles to Sample related pages and update existing job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1900	Task	Closed	—	General support PSPC testing. Sprint 19	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1899	Task	Closed	—	General support PSPC testing. Sprint 18	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1482	Story	Closed	Monish Grover	View next/last calibration and PM dates for instruments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1006	Story	Closed	Ize Imai	Refactor the SELECT, RETAIN, and ARCHIVE sample tracking	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-997	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent type data from LOPS to LV1.0	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-715	Story	Closed	Ilya Savinov	Reagent Type Sync from LOPS to LV1.0 (LOPS ticket)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 18 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2897	Task	Closed	Matt Smith	Restore Previous DB Docker Image Tag	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2717	Defect	Verified	Brandon Culver	Fix query for source plates in the Sequence Manifest (Single Batch)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2639	Defect	Closed	Brandon Culver	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest: Single row expected instea	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2549	Story	Verified	Lev Evstratov	Update Primer lookups in Sequence Manifest	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2548	Story	Closed	Leonid Garin	Update Sequencing Run Complete processing logic to query for the sequencer and flow cell id from RunDetails SDI Group	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2545	Task	Closed	Mai Ton-Nu	Create list of reagent users and eqmt users	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2501	Tweak	Closed	Andrei Smolkin	Update the Trackitem status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2477	Story	Closed	Lev Evstratov	Support "Pipeline Analysis Only" Assay Templates that may not have Test Methods added	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2392	Story	Closed	Andrei Smolkin	Add Assay status, Assay Template type, and Disposition	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2387	Story	Closed	Leonid Garin	The system shall have the ability to create assay instance records for control samples that are created off of QC Batch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2353	Task	Closed	Vasilii Sevriugin	Update Kafka Message Schemas for schema registry improvements and backwards compatibility	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2327	Story	Closed	Vasilii Sevriugin	Validate selection of Reagent lot as Required on a QC Batch Control	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2163	Task	Closed	—	Create a read-only database account for QA environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2123	Task	Closed	Matt Smith	Spike - Brain storm (design) to update the status of the sample based on ARM Message if samples are not processed by LOP	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2118	Story	Closed	Valeria Vargas	Update Pool sample page to default Sample template and Natera barcode as Mandatory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2046	Story	Closed	Vasiliy Kumaev	Support "Blind Scan" process for racks	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2017	Tweak	Closed	Jonathan Quinn	Configure roles to Array related pages and update existing job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1926	Story	Closed	Brandon Culver	Add data items and queries/filters to Trackitem tramstop	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1488	Story	Closed	Mai Ton-Nu	Instrument work order group by Testing Department	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1381	Task	Closed	Vasiliy Kumaev	Spike - Investigate and document plan for data mesh Assay Information Package delivery	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-771	Task	Closed	Vasilii Sevriugin	JLogging Updates for SpringBoot	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-643	Task	Closed	Leonid Garin	Demonstrate the ability to call an Action with restricted Web Request Security Policy selected and apply to existing aja	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 17 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2512	Defect	Verified	Vasiliy Kumaev	Save and Release array data entry throw exception.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2447	Defect	Verified	Vasiliy Kumaev	Pipe results are not auto-approved with all the passing metrics	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2413	Defect	Verified	Matt Smith	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest. Exception: java.lang.Index	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2393	Story	Closed	Lev Evstratov	TextCustomSpecRule only supports Sample SDC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2355	Task	Closed	Vasilii Sevriugin	Fix environment variable KAFKA_SCHEMA_REGISTRY_URL	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2221	Story	Closed	Valeria Vargas	Update the sample list and manage test list page to filter samples by user's testing lab	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2208	Story	Closed	Kevin Detweiler	The system shall have the departmental security defined on the required SDCs.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2190	Story	Closed	Vasiliy Kumaev	Validations and logic on the Accept and Accept Partial buttons to ensure users perform the correct actions during Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2159	Task	Closed	Mai Ton-Nu	Data cleanup for data import - Plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2151	Story	Closed	Kevin Detweiler	Update all departments to have external flag set to N	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2117	Tweak	Closed	Brandon Culver	Natera Barcodes for child samples are not being populated on the parent sample page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2039	Tweak	Closed	Jonathan Quinn	Configure roles to Instrument (Equipment) related pages and add/update job types	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2031	Story	Closed	Leonid Garin	Unable to filter CrossSDICalc in Arrays to only pull data from current Array Method Instance	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2018	Story	Closed	Kevin Detweiler	The system shall have Jobtypes and roles configured	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2013	Story	Closed	Lev Evstratov	QC Batch Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2008	Tweak	Closed	Kevin Detweiler	The system shall have the following roles configured to Test pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1974	Story	Closed	Lev Evstratov	The system shall update the sample look up page to remove sample templates from the list of samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1898	Task	Closed	—	General support PSPC testing. Sprint 17	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1586	Story	Closed	Lev Evstratov	Block assay dispositioning when there are active Holds associated	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1484	Story	Closed	Mai Ton-Nu	Instrument queries	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1483	Story	Closed	Jonathan Quinn	Create a method to record qualification status of instrument	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1002	Task	Closed	Vasilii Sevriugin	Update Web Container Build Script to Fail on Takipi Errors	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-960	Story	Closed	Vasilii Sevriugin	E-Signature Capture During Dataset Approval/Rejection	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-837	Task	Closed	Ilya Savinov	Add Reagent Sync DB User to Docker Scripts and Config Server	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-770	Task	Closed	Matt Smith	Review current OKTA configurations in springboot to ensure it works as expected and can be turned on	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-648	Task	Closed	Valeria Vargas	Code Review Feedback for TransferExecutionDetail	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 16 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2285	Defect	Closed	Brandon Culver	Pipe results processing fails: Assays not found for armguids	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2191	Story	Closed	Vasiliy Kumaev	Create policy that sets wells to "Rejected" when results fail during Array QC Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2179	Story	Closed	Vasiliy Kumaev	Ability to associate the respective reagent container barcode to a control when we select the container for a control in	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2154	Tweak	Closed	Lev Evstratov	Update WES metric profile	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2153	Story	Closed	Lev Evstratov	Update Assay QC UI to show counts of number of assays pending disposition	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2019	Story	Closed	Vasiliy Kumaev	Refactor the trigger for Assay "Completed" status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2012	Story	Closed	Lev Evstratov	Automatically add assay instance records to Incidents	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1897	Task	Closed	—	General support PSPC testing. Sprint 16	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1748	Story	Closed	Kevin Detweiler	The system shall have storage units types for Histopathology	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1657	Task	Closed	—	Spike - Investigate how to implement the ability to scan samples into a rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1610	Tweak	Closed	Hani Yakan	The system shall assign all delete buttons to Admin role.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1598	Tweak	Closed	Brandon Culver	The system shall have the following roles configured to the Assay pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-843	Task	Closed	Vasilii Sevriugin	Make sure that API security is turned on and configured correctly for Kafka	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 15 (21 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2175	Task	Closed	Brandon Culver	Investigate control error message preventing successful processing of pipeline done message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1888	Story	Closed	Lev Evstratov	Assay QC UI Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1887	Task	Closed	Vasilii Sevriugin	General support PSPC testing. Sprint 15	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1865	Task	Closed	Leonid Garin	Part 1 - Refactor apply child sample plan to improve performance of bulk child sample creation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1779	Story	Closed	Leonid Garin	Provide a method for performing text validations within a parameter list	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1596	Story	Closed	Brandon Culver	The system shall display required tram lines and tram stops on the LabAdmin site map	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1589	Story	Closed	Chris Lott	The system shall display required tram lines and tram stops on the LIMS site map	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1468	Story	Closed	Lev Evstratov	Allow Users to Refresh/Retrigger Assay Auto-Disposition Logic When Batches and Runs are Approved.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1406	Story	Closed	Vasiliy Kumaev	Update Assay QC UI and Processing to support metrics with errors instead of expected values	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1379	Story	Closed	Chris Lott	The system shall have specific information populate on the result data entry page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1025	Story	Closed	—	Gitlab Work	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1001	Task	Closed	Vasilii Sevriugin	Address Maven Build Failures	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-959	Story	Closed	Vasiliy Kumaev	Pipeline Run Error Handling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-930	Story	Closed	Lev Evstratov	The system shall provide users with the the ability to log Incidents and indicate if a Hold on assay dispositioning is r	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-918	Task	Closed	—	Create the functionality for IMT system level parameters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-799	Task	Closed	—	Review and Update all Design Documents and Specifications	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-764	Task	Closed	Brandon Culver	Spike - Investigate how to ensure that an array well location with zero quantity can not be used	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-690	Task	Closed	Brandon Culver	Spike - test loading trackitems into an array and then transferring expired trackitems	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-288	Task	Closed	Vasilii Sevriugin	Address Code Review Comments for SequenceGenerator	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 14 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2145	Task	Closed	Brandon Culver	Update seq barcodes for NovaSeqX: staging & e2e	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2128	Defect	Verified	—	Pipe only seq manifest is not created: No Assay Template Workitems found	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2030	Task	Closed	—	Configure additional test controls for WES/X pipeline at integration env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-2029	Task	Closed	—	Configure additional test controls for WES/X pipeline at staging env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1932	Story	Closed	Leonid Garin	New Assay is not displayed in Assay element on Sample maint/view when there are no workitems defined on the assay templa	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1889	Story	Closed	Leonid Garin	Remove Default Assay Template Logic for Filler Samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1886	Task	Closed	Brandon Culver	Environment setup to support PSPC testing. Sprint 14	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1885	Task	Closed	Ilya Savinov	Spike - Investigate and document plan for deployment of reagent sync objects	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1874	Story	Closed	Vasiliy Kumaev	Assay Dispositioning Updates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1868	Defect	Closed	Mikhail Terpugov	Net Conc shouldn't be stored on Sample at Normalization	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1848	Story	Closed	Leonid Garin	Update Filler Sample Exclusion	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1845	Defect	Verified	Brad Garrett	Extraction QC Review: parent sample doesn't have a hyperlink	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1835	Tweak	Verified	Chris Lott	When sample template is set to auto receive, the sample status created is Received.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1834	Defect	Closed	Mikhail Terpugov	Controls should be referred to as 'Blood Control' and 'NTC Control'	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1768	Task	Closed	Brad Garrett	Update RunLogPolicy and rundata processors to allow for multiple array layouts	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1746	Story	Closed	Meghana Joshi	Tissue Extraction 4 - Associate Sample Group with Control to Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1708	Story	Closed	Meghana Joshi	Blood Extraction - Rundata: Verify Blood Samples Scheduled for Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1679	Task	Closed	—	Platform part. Create hybrid assay templates for a new build deployment for the system test (SW e2e)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1597	Story	Closed	Leonid Garin	The system shall have the ability to scan sample natera barcode on the sample file page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1584	Task	Closed	Brandon Culver	Formulations Test Method prototype	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1517	Task	Closed	Vladimir Piyanov	LOPS running natively on arm64	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1424	Task	Closed	Gianna Bell-Eunice	Export Pre-Capture Pooling array transfer method v2 from staging-572	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1355	Task	Closed	Vasiliy Kumaev	Create Devtools script for Pipe Results Message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1273	Story	Closed	Mikhail Terpugov	Library QC Review - Create Library QC Review page with Approve Action for Library Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1272	Story	Closed	Klead Fusha	Library QC - Create Blood Quant Plate-Level QC Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1271	Story	Closed	Klead Fusha	Library QC - Create Blood Sample / Control-Level Specification Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1269	Story	Closed	Klead Fusha	Library Quant - Create Concentration calculation Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1268	Story	Closed	Mikhail Terpugov	Library Quant - Create Results RunData Processor and master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1267	Story	Closed	Mikhail Terpugov	Library Quant - Create Plating RunData Processor and master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1249	Story	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - Create Tube-to-Rack Transfer Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1169	Task	Closed	—	Investigation: Unable to view audit trail for assay instance records	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1129	Story	Closed	Mikhail Terpugov	Normalization - Record rundata headers in SDI Group	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-929	Story	Closed	Vasilii Sevriugin	The system shall provide a manual way to re-trigger a new Pipeline Launch Request for a sequencing run.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-784	Story	Closed	Brandon Culver	In-line QC - Use of unapproved lots	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-697	Task	Closed	—	Provision Oracle Enterprise License	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-620	Story	Closed	Lev Evstratov	Reagent Container barcodes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 13 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1925	Defect	Closed	—	Assay Templates do not have a way to indicate if an assay template is for filler samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1877	Tweak	Closed	Vasilii Sevriugin	Add SQE to schema registration pattern	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1864	Story	Closed	Klead Fusha	Tissue Extraction Workflow: Task-based approach to advance Sample Groups	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1860	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Plate with Control	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1814	Tweak	Verified	Vasilii Sevriugin	Technical Update to Support Schema registration on KEH 1.51 and up	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1777	Defect	Closed	Leonid Garin	Retest from an array Manage Tests page: No rows found.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1771	Story	Closed	Mikhail Makarin	Library Amplification - Record Rundata Headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1770	Story	Closed	Mikhail Makarin	Library Prep - Record Rundata Headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1769	Story	Closed	Mikhail Makarin	Extraction Quant - Record 'Plating' Rundata Headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1767	Sub-task	Closed	Michael Livingston	Import NR0542 into repository to support Deparaffinization configuration	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1761	Task	Closed	—	Change configs for lwstaging-11 to point to the kafka deployed from Kubernetes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1759	Defect	Closed	Mikhail Terpugov	After normalization rundata procesing sample data set not in Completed Status	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1757	Tweak	Closed	Vasilii Sevriugin	Add additional config to disable encryption for test environments	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1752	Tweak	Closed	Klead Fusha	Update Parameter list Pathologist Review FFPE Tissue/Variant: PRO-0014905	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1751	Task	Closed	—	Record all Histopathology steps	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1738	Task	Closed	Vasiliy Kumaev	Exception Handling Refactoring	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1731	Task	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - SPIKE: Create Tube-to-Rack Transfer Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1723	Defect	Closed	Leonid Garin	LOPS - assay status doesn't change to 'inProgress' after creating a child sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1717	Defect	Closed	Alex Pakhunov	Unable to process raw quant output file from M200 instrument	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1712	Story	Closed	Mikhail Makarin	Blood Extraction - Store Rundata File as Attachment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1707	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Include Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1693	Defect	Closed	Leonid Garin	Fix Retest button on Manage Tests Pop Out window from the Assay Maint page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1685	Story	Closed	Meghana Joshi	Tissue Extraction 7 > Tissue DNA Extraction - Create Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1682	Story	Closed	Mikhail Makarin	The system shall display the associated Parent or Child information on the sample maintenance page.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1677	Story	Closed	Brandon Culver	Update jasper reports for run, batches, and samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1634	Story	Closed	Meghana Joshi	Extraction QC Review - QC Review Page for Extraction QUANT Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1632	Story	Closed	Lev Evstratov	Update Controls page in the Assay QC UI to support reworked controls and multi-use containers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1609	Story	Closed	Leonid Garin	Support Assay instance creation for Filler samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1592	Story	Closed	Vasiliy Kumaev	Add remaining buttons and functionality to Primer Design Assay QC UI	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1588	Story	Closed	Chris Lott	Update manage test list page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1568	Story	Closed	Meghana Joshi	Test Only. Blood extraction Filter sample list page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1567	Story	Closed	Brad Garrett	Fragmentation - Populate current date/time (Test only)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1565	Story	Closed	Klead Fusha	Extraction quant - Expanded Calculated Concentration logic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1514	Story	Closed	Lev Evstratov	Create Assay QC Paramlists for DAQ and WES Analysis and Primer Design	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1507	Story	Closed	Leonid Garin	The system shall provide a way to configure the next Group Test Method to be assigned to the current sample.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1469	Story	Closed	Lev Evstratov	Display "Assays Pending Disposition" in the Assay QC UI	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1436	Tweak	Closed	Mikhail Makarin	Remove the Retest Button on the Sample Maint Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1396	Story	Closed	Vasiliy Kumaev	Assay QC Array Closure	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1391	Story	Closed	Vasiliy Kumaev	Handle lineItemId updates from ARM	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1266	Story	Closed	Mikhail Terpugov	Library Quant - Create Worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1248	Story	Closed	Klead Fusha	Tissue Extraction 3 > Lysis and Decrosslinking - Create Run Details Master Data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1247	Story	Closed	Michael Livingston	Tissue Extraction 2 > Deparaffinization - Select Sample Group, Record Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1246	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples v2	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1157	Story	Closed	Chris Lott	The system shall have the ability to search for one or more sample barcodes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1111	Story	Closed	Michael Livingston	WES: Tissue Extraction - Sample Group Page Format	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 12 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1861	Defect	Closed	Vasilii Sevriugin	Statuses are available for selection when no plates having such statuses are present in the system	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1843	Defect	Closed	Chris Lott	Search Queries are duplicated at Samples - Review page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1734	Tweak	Closed	Brad Garrett	Remove Lock Attachment Popup - Worklist	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1716	Task	Closed	Alex Pakhunov	Investigate solution to process M200 raw quant output file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1683	Task	Closed	Michael Livingston	AQC Batch Spike	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1619	Task	Closed	Klead Fusha	Update Histopathology Test Method Description	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1614	Story	Closed	Mikhail Terpugov	Normalization - Validate Controls (Blood Plate)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1611	Tweak	Opened	Meghana Joshi	We should not save run log headers in blood extraction array zone	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-1608	Tweak	Verified	Matt Smith	Move Child Sample Flag Field Check to Event Plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1492	Story	Closed	Michael Livingston	Tissue Extraction 4 - Create Tissue Rack	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1478	Story	Closed	Michael Livingston	Create Rack List Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1477	Story	Closed	Lev Evstratov	Update Assay QC UI to support reworked samples and arrays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1408	Story	Closed	Vasiliy Kumaev	Update Pipe Results Message Schema to v1.1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1404	Story	Closed	Brandon Culver	Update Assay QC UI to support Pipeline Analysis Only Assays where Pipe Results are only on Run Level	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1254	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Rundata Processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1253	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Exclude Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1234	Story	Closed	Mikhail Terpugov	Normalization - Create rundata processor, plates for Blood plates	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1152	Story	Closed	Vasilii Sevriugin	The system shall have the ability to decrypt information from the Accessioning Message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1137	Story	Closed	Vasiliy Kumaev	The system shall provide a way for users to Disposition assays from the Assay QC UI.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1126	Story	Closed	Brad Garrett	Extraction QC Review - Create Extraction QC Review Page with Approve Action for Extraction Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1109	Story	Closed	Brad Garrett	Tissue Extraction 7 > Tissue DNA Extraction - Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1055	Story	Closed	Leonid Garin	Create a streamlined process for allowing users to rework samples from an array	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1022	Story	Closed	Lev Evstratov	Add DAQ Pipe Job IDs to the Primer Design Pipe Launch Request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-958	Story	Closed	Vasilii Sevriugin	Assay QC Review Queues	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-894	Task	Closed	—	Performance Investigation - Accessioning Message Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-674	Task	Closed	Matt Smith	Create Confluence page with instructions on setting up local and shared dev environments for LOPS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 11 (39 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1636	Defect	Closed	Leonid Garin	Workitem e-sig data is not recorded into Database	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1613	Defect	Ready for SQA	—	Fix errors in test methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-1601	Story	Closed	Brad Garrett	Update to allow results to be promoted a 2nd time	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1600	Task	Closed	Alex Pakhunov	Script to generate runlogs	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-242)
LOPS-1593	Task	Closed	Vladimir Piyanov	Create dedicated rancher staging environment for IAP	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1590	Tweak	Closed	Klead Fusha	Add NAT-800316 to LOPS Repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1587	Task	Closed	—	LOPS - assay status changes to "completed" instead of "in progress"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1577	Task	Closed	Matt Smith	Export Existing Platform Data for Repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1573	Task	Closed	Vasiliy Kumaev	Fail processing transaction when NtrException is thrown	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1570	Sub-task	Closed	Vasiliy Kumaev	Please add Pipe Job ID and Pipe Job Status params to WES Primer Design array method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1518	Task	Closed	Brad Garrett	WES on X Demo prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1505	Task	Closed	—	LOPS does not generate WES extraction kafka message for EDTA samples (events.labops.workflow.status.v1)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1448	Story	Closed	Brad Garrett	Run Details Manual Data Entry	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1445	Tweak	Closed	Klead Fusha	Update Histology sample templates to contain Quantity, Units and Container type.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1423	Task	Closed	Mikhail Makarin	Please set up Sequencing array methods	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1421	Story	Closed	Meghana Joshi	Blood Extraction - Create child sample via rundata processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1397	Task	Closed	Mikhail Terpugov	Review OOB QC Review page to determine if it can be used as is	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1395	Story	Closed	Vasiliy Kumaev	Record Pipe Job ID and and status from Pipe Results Message on the Array Method	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1385	Tweak	Closed	Klead Fusha	Update Test for PRO-0014905 Pathologist Review FFPE Tissue	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1378	Story	Closed	Brad Garrett	Blood Extraction - sdi group for capturing rundetails	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1357	Story	Closed	Chris Lott	The system shall display associated assay instance records on the sample maint and view pages.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1354	Task	Closed	Vasilii Sevriugin	Implement changes required to support message compression in the Pipe Results topic	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1348	Tweak	Closed	Vasilii Sevriugin	Implement changes to all kafka message processing to generate the correct key in the header	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1245	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples > Select samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1237	Story	Closed	Brad Garrett	Record Fragmentation Run Details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1226	Story	Closed	Mikhail Terpugov	Normalization - Create Worklist processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1186	Story	Closed	Lev Evstratov	Update Samples List page on the Assay QC UI to include Assay information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1176	Story	Closed	Brad Garrett	Extraction QC - Create Blood Quant Plate Specification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1139	Story	Closed	Klead Fusha	The system shall have Histopathology testing in an Assay Template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1121	Story	Closed	Brad Garrett	Extraction Quant QC - Create Blood Sample/control Specifications	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1119	Story	Closed	Michael Livingston	Create Concentration Calculation for Extraction Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1110	Story	Closed	Meghana Joshi	Blood Extraction - Build action for qc batch to store rundata headers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1104	Tweak	Closed	Klead Fusha	Import remaining Product config data(sample types, container types, uom) into LOPS repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1097	Story	Closed	Chris Lott	The system shall provide users with a manual way to Fail an Assay prior to Assay QC	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1088	Story	Closed	Brandon Culver	Update Assay QC UI to support review of control results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-956	Story	Closed	Leonid Garin	Workitem Re-Testing in Bulk	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-944	Story	Closed	Vasiliy Kumaev	Automated disposition of Assays during processing of the Pipe Results message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-844	Tweak	Closed	Klead Fusha	Import Product config Sites data into LOPS repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-760	Story	Closed	Vasiliy Kumaev	When the system parses the sample accessioning messages, the Request and samples will be created along with required dat	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 10 (26 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1581	Sub-task	Closed	Michael Livingston	Remove "InstrumentID" field from "Wes Library Amplification" section on Data Entry	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1447	Story	Closed	Brad Garrett	Child pages for run detail implementation of SDI Groups	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1446	Task	Closed	Matt Smith	Child sample is not created using Actions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1428	Sub-task	Closed	Meghana Joshi	Add support for data entry dest plate array params	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1422	Task	Closed	Matt Smith	Update SQE_Generic_TM_02 TM and Assay Template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1412	Story	Closed	Meghana Joshi	Updates / Build for Blood Extraction Results Review	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1410	Task	Closed	Matt Smith	Blood gDNA is not created	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1401	Story	Closed	Brad Garrett	Implement SDI Group page for manual data entry of run details	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1400	Tweak	Closed	Chris Lott	There is a missing action prompt when creating multiple samples on Add Child Sample Page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1321	Tweak	Verified	Lev Evstratov	Import Equipment Models into LOPS Repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1320	Tweak	Verified	Lev Evstratov	Import Equipment Types into LOPS Repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1264	Story	Closed	Michael Livingston	Library Amplification - Create rundata processor and update master data if required	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1263	Story	Closed	Michael Livingston	Library Amplification - Create Worklist processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1261	Story	Closed	Meghana Joshi	Blood Extraction Quant - Create RunData Results Processor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1243	Story	Closed	Vasilii Sevriugin	When the child sample is created by and a sample template is chosen, specific data shall be copied to the sample from th	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1239	Story	Closed	Michael Livingston	Library Prep - Create Rundata Processor and master data	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1238	Story	Closed	Michael Livingston	Library Prep - Create worklist processor button	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1155	Story	Closed	Leonid Garin	Update Pipe Launch Request to Use Real Tumor Purity Value	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1149	Tweak	Closed	Leonid Garin	The system shall have the ability to define the disposal statuses	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1095	Story	Closed	Leonid Garin	Update Assay Dispositioned Status Messages to support "XCPT-00001" logic and requirements	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1057	Story	Closed	Vasiliy Kumaev	Auto-approvals for datasets on the run and batch levels	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1033	Story	Closed	Mikhail Terpugov	The system shall have the ability to add a retest and have it associated to the assay instance	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-974	Story	Closed	Leonid Garin	Exclude filler samples and cancelled samples from the pipeline launch request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-818	Tweak	Closed	Brandon Culver	The system shall display a free-text field for users to enter in notes for a dataset during QC Review.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-814	Story	Closed	Vasiliy Kumaev	When a child sample is created, testing is assigned from the assay template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-737	Story	Closed	Lev Evstratov	Update ARM Message Processing for "WES Analysis and Primer Design Assay"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 09 (46 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1403	Task	Closed	Brandon Culver	Investigate and fix child sample issues in gsp integration env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1358	Tweak	Closed	Meghana Joshi	Update assay template ngs-wes-normal-blood-somatic-v3 to populate sample type, container type, and sample template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1347	Task	Closed	—	SW e2e support	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1343	Tweak	Closed	Brandon Culver	Resolve Errors in Assay QC Web Pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1342	Tweak	Closed	Brandon Culver	Update Pipe Results message processing to handle controlMetrics object in batches array	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1341	Tweak	Closed	Brandon Culver	Update Pipe Results Message Processing to fix metric profile and paramlist variant lookups	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1327	Story	Closed	Meghana Joshi	Blood Extraction Quant - Update to plating for Standards	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1324	Story	Closed	Brad Garrett	Blood Extraction - Worklist generation and runlog upload	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1323	Sub-task	Closed	Matt Smith	Update Container Type SDC Export Script	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1299	Task	Closed	—	KEH k8s configuration for staging-572	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1244	Sub-task	Closed	Matt Smith	Fix Test Method Export Script and Existing Exports	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1235	Tweak	Closed	Michael Livingston	Blood Extraction - Create a method for handling creation of child dna samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1230	Story	Closed	Brad Garrett	Implement QC Batch UI and RunDetails objects	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1217	Task	Closed	Brad Garrett	Spike - Investigate how to create child DNA samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1187	Task	Closed	Brad Garrett	Update Assay QC Paramlists for sw e2e	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1185	Story	Closed	Chris Lott	Add "Manage Tests" button to the Workitems element on the Assay Instance Maint page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1180	Tweak	Closed	Lev Evstratov	Update Exceptions Code List based on Product Config	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1174	Tweak	Closed	Meghana Joshi	Consolidate duplicate master data for Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1168	Story	Closed	Vasilii Sevriugin	Implement a byte array serializer	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1167	Story	Closed	Lev Evstratov	The system shall display required tram lines and tram stops on the LIMS site map	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1165	Tweak	Closed	Lev Evstratov	Update Germline and Somatic Sample Template Description	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1164	Story	Closed	Leonid Garin	The system shall display required tram lines and tram stops on the Lab Admin site map	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1163	Story	Closed	Lev Evstratov	The system shall have the required Job types configured	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1156	Story	Closed	Leonid Garin	The system shall have the ability to display the associated trackitem information on the sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1150	Task	Closed	Meghana Joshi	Spike Task: Investigate if transfer execution detail can be utilized for rgnt/eqp at Blood Extractions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1135	Story	Closed	Vasiliy Kumaev	When an assay is first assigned to a sample and the new assay instance record is generated, the system shall apply appro	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1132	Task	Closed	Vasilii Sevriugin	DLQ/Bypass/log for invalid messages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1117	Story	Closed	Brad Garrett	Add Extraction Quant Worklist Generator and Quant Plating RunData Upload buttons to the ArrayList page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1090	Task	Closed	Vasilii Sevriugin	Spike - Download Oracle Enterprise and document steps for install	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1087	Story	Closed	Brandon Culver	Update Pipe Results Message Processing to Support Controls	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1085	Tweak	Closed	Lev Evstratov	The system shall have the following Sample templates for Histopathology Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1083	Tweak	Closed	Lev Evstratov	The system shall have a Group Test method for processing HE Stain Slides in Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1082	Tweak	Closed	Lev Evstratov	The system shall have a Group test method for Block Processing in Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1071	Tweak	Closed	Michael Livingston	The system shall have Histology Specimen Verification testing for Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1070	Tweak	Closed	Lev Evstratov	The system shall have Histology Autostainer Operation testing for Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1053	Task	Closed	Vasiliy Kumaev	Setup Integration Tests	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-910	Task	Closed	Matt Smith	Update Patch Validation Script to Fail on Error	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-908	Story	Closed	Vasiliy Kumaev	Automated Assay Cancellation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-907	Story	Closed	Meghana Joshi	Extraction Quant - Create the workflow task and master data for import of the rundata	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-905	Task	Closed	Brad Garrett	Spike - Investigate and document a design plan for QC Batches / Rundetail	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-869	Story	Closed	Lev Evstratov	Update Manual Assay Cancellation Functionality to Set Assay Disposition to "Cancelled"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-862	Task	Closed	—	Spike - Create design for how to streamline retesting	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-762	Task	Closed	Vasilii Sevriugin	update gitlab pipeline to automatically up version the custom jar	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-580	Sub-task	Closed	—	Spike - Create design plan for how we will be able to record QC metrics from pipelines on standards and controls on arra	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 08 (29 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1296	Task	Closed	—	Pipeline - LOPS integration: results investigation	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1183	Story	Closed	Michael Livingston	Update array methods with new parameter - RunDataEntered	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1181	Task	Closed	Vasilii Sevriugin	Investigate issues with Pipe Results message and coordinate with Pipelines for testing and fix	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1162	Task	Closed	—	LOPS jama wes on x test cases reorg for the systems testing team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1161	Task	Closed	Matt Smith	Update custom action to OOTB Action for creating child samples from child sample plan	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1136	Tweak	Verified	Michael Livingston	LOPS - doesn't support measurement: "UOM-00001" and other values (events.accessioning.sample.info.v1)	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1133	Task	Closed	Vasilii Sevriugin	Implement changes to support KEH migration to Kubernetes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1123	Story	Closed	Vasiliy Kumaev	The system shall provide the ability to promote results from an array method to sample datasets even when there are mul	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1092	Task	Closed	Vasilii Sevriugin	Spike - Impact assessment on Kubernetes / Kafka transition	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1091	Task	Closed	Vasilii Sevriugin	Add labels to docker images in infrastructure repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1084	Story	Closed	Lev Evstratov	Add way to configure "Point of No Return" on the assay template	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1073	Task	Closed	Brad Garrett	Create Assay QC Paramlists for SW E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1072	Tweak	Closed	Michael Livingston	The system shall have Anatomic Pathologist Review of Formalin Fixed Paraffin Embedded (FFPE) Tissue testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1069	Tweak	Closed	Michael Livingston	The system shall have Histology Macrodissection testing for Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1068	Tweak	Closed	Michael Livingston	The system shall have Histology Embedding testing for Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1067	Tweak	Closed	Michael Livingston	The system shall have testing for Histology Microtomy for Austin	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1058	Story	Closed	Brandon Culver	Support QC Metrics where the metric name has >40 characters	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1032	Story	Closed	Chris Lott	The system shall display specific information on the Manage Test list page	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-906	Story	Closed	Meghana Joshi	Create quantification workflow task for download of samples eligible for quantification to a file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-904	Story	Closed	Meghana Joshi	Create workflow task for upload of WES blood extraction rundata log and transfer to array	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-893	Task	Closed	Brad Garrett	Review Automated data approval for Array Zones following latest 8.8 patchsets application	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-883	Tweak	Closed	Michael Livingston	Create a query for the array page "By array method"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-866	Tweak	Closed	Chris Lott	The sample genealogy page shall display specific sample information	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-845	Task	Closed	Michael Livingston	Import Product config Products and Assay data into LOPS repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-816	Story	Closed	Vasilii Sevriugin	When the sample is created as a child sample, the system shall define the testing lab and site from the parent sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-815	Story	Closed	Chris Lott	The system shall have the ability to define the Natera barcode when creating multiple children samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-809	Story	Closed	Brandon Culver	When a user receives the sample, the system shall define the testing lab and site from the user	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-602	Story	Closed	Chris Lott	Update Event Plan to Use Correct Child Sample Plan Code	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 07 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1116	Task	Closed	—	Deploy qa-86 kafka-event-hub to k8s	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1081	Tweak	Closed	Michael Livingston	Update Array Method WESTissueExtraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1079	Tweak	Closed	Michael Livingston	Update Test Methods for Software E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1078	Tweak	Closed	Michael Livingston	Update Transaction Type for Software E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1077	Task	Closed	Vasilii Sevriugin	Update topic names for transaction types to append .v1	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1076	Task	Closed	—	Confirm all topic names for transaction types have ".v1" appended	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1056	Task	Closed	—	Assess if LV patch resolves the bug that prevents auto-approvals for run and batch level datasets	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1049	Task	Closed	Vasilii Sevriugin	Coordinate with ARM on path forward for assay request message schema	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1043	Task	Closed	Vasilii Sevriugin	Update Intf Service to Use New Kafka POJO Schemas	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1042	Task	Closed	Brad Garrett	Prep for On-Site	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-913	Tweak	Closed	Michael Livingston	Create array methods and child sample plan for WES Tissue DNA Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-903	Story	Closed	Meghana Joshi	Create workflow task for download of samples eligible for extraction to a file	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-886	Story	Closed	Michael Livingston	Create array method and transfer method for WES Library Amplification plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-860	Task	Closed	Mikhail Novokshchenov	LIMS to LOPS/PIPE integration - EDTA/tissue workflow + assay QC for samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-832	Tweak	Closed	Michael Livingston	Sample type, arraymethod updates for Software E2E	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-772	Task	Closed	Vasilii Sevriugin	Spike - Investigate and document a strategy for handling versioning of the custom jar	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-633	Story	Verified	Vasilii Sevriugin	Update ARM Message Processing to support v1.16 of the schema	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 06 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1046	Task	Closed	—	E2E Dry Run Testing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1014	Story	Verified	Vasiliy Kumaev	Implement changes required to ensure the Pipe Launch Request uses the correct Flow Cell ID	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-1005	Task	Closed	Matt Smith	Create a LOPS system instance for users to have hands on testing and practice	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-963	Story	Closed	Vasiliy Kumaev	The system shall display associated assay instance records on the sample maint and view pages.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-951	Story	Verified	Vasiliy Kumaev	Implement changes to support manual data entry for the flow cell ID when setting up the sequencing run	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-917	Task	Closed	Vasilii Sevriugin	Add datadog to Kafka sprintboot service	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-915	Story	Closed	Brandon Culver	Update the trackitem DB Trigger for UUID	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-914	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-900	Story	Closed	Brandon Culver	The system shall have the ability to define an Assay	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-899	Tweak	Closed	Brandon Culver	Spike - Create Design plan for refactoring sequencing run flow cell setup	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-897	Task	Closed	Vasilii Sevriugin	Import schemas from Swaggerhub for topics that LOPS consumes from	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-888	Story	Closed	Meghana Joshi	Create Test Method "WES Capture PCR Cleanup"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-871	Task	Closed	Matt Smith	Create Read-Only DB User for GSP Launch Team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-864	Task	Closed	Brad Garrett	Spike - Create design plan for setting up any necessary arrays automatically for pipeline only assays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-848	Task	Closed	Vasilii Sevriugin	Update LOPS LabVantage to PatchSet 8.8.0.10 Version	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-807	Task	Closed	Matt Smith	Assess which requirements and specifications are impacted by the switch from intf service to springboot	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-778	Task	Closed	Mai Ton-Nu	Product config Container types and units gap analysis	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-773	Task	Closed	Brandon Culver	Configure Jasper for use on LabVantage 8.8	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 05 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-942	Sub-task	Closed	—	WES Pre-Capture Pooling Param List - 'Sample Type' parameter is missing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-916	Task	Closed	—	Fix broken web image in LOPS-MVP-5 branch	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-912	Tweak	Verified	Michael Livingston	Create Test method and parameter list for "WES Tissue DNA Extraction:	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-895	Tweak	Verified	Michael Livingston	Create Assay Request and pipeline code information for WES on X	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-891	Story	Closed	Michael Livingston	Update array method "WES Sequencing" to include flow cell id and instrument id	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-890	Story	Closed	Michael Livingston	Create transfer method "WES Sequencing Prep Transfer"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-889	Story	Closed	Michael Livingston	Create transfer method and array method for WES Capture PCR Cleanup plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-887	Story	Closed	Michael Livingston	Create array method and transfer method for WES Pre-Capture Pooling Plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-885	Story	Verified	Michael Livingston	Create Test Methods for WES PreCapture Pooling	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-884	Story	Verified	Michael Livingston	Create Test Methods for WES Library Amplification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-882	Story	Verified	Michael Livingston	Create Array method and array layout for Blood extraction plate	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-881	Tweak	Verified	Michael Livingston	Create a query for the sample page "by test method"	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-878	Story	Closed	Michael Livingston	Create Test Methods for Sig WES Downstream	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-873	Task	Closed	Brad Garrett	Prep for Assay QC Demo to CLS	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-872	Story	Closed	Brad Garrett	Update Pipeline Results Message processing to support Pipeline Analysis Only assays and upversion to v0.6	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-867	Story	Closed	Vasiliy Kumaev	When the child sample is created and a sample template is chosen, specific data shall be copied to the sample from the s	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-865	Story	Closed	Vasiliy Kumaev	Update Assay Request Message Processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-857	Story	Verified	Michael Livingston	Create Array Templates and Test Methods for Sig WES Blood Extraction	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-854	Task	Closed	Vasilii Sevriugin	[Pipe Results] Implement changes needed to consume from the topic with schema registration enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-853	Task	Closed	Vasilii Sevriugin	[Sequencing Run Complete] Implement changes needed to consume from the topic with schema registration enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-852	Task	Closed	Vasilii Sevriugin	[ARM] Implement changes needed to consume from the topic with schema registration enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-851	Task	Closed	Vasilii Sevriugin	[Accessioning] Implement changes needed to consume from the topic with schema registration enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-850	Task	Closed	Vasilii Sevriugin	Implement updates needed to support consuming Kafka messages with schema registration enabled	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-846	Task	Closed	Vasilii Sevriugin	Update Kafka UI to use the LOPS Kafka User	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-840	Task	Closed	Matt Smith	Add code owners to infrastructure repository	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-834	Task	Closed	Vasilii Sevriugin	Update topics for all Kafka messages to include version	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-831	Story	Closed	Brandon Culver	Controls in the pipe launch request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-826	Story	Closed	Meghana Joshi	The system shall produce a Sample Event Kafka Message in JSON format that contains the required information for the samp	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-811	Tweak	Closed	Brandon Culver	The system shall have the ability to display the associated trackitem information on the sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-810	Tweak	Closed	Chris Lott	The sample notes shall always display on sample maintenance pages	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-803	Task	Closed	Vasilii Sevriugin	Add Kafka schemas to GitLab	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-802	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-801	Story	Closed	Brad Garrett	The system shall provide a way for users to view and approve/reject run, batch, and sample level results that are recor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-790	Story	Closed	Chris Lott	The system shall have the departmental security defined on the required SDCs.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-733	Story	Closed	Vasiliy Kumaev	When an assay disposition is updated to "Passed", "Failed", or "Cancelled", the system shall produce a message in JSON	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-685	Task	Closed	Matt Smith	Configure gitlab pipeline to allow deployments from conductor	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 04 (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-859	Story	Closed	Brandon Culver	The system shall generate unique IDs in UUID format on trackitems for reagents.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-855	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-839	Sub-task	Closed	Vasiliy Kumaev	Configure Master Data: Exception Codes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-838	Story	Verified	Vasiliy Kumaev	The system shall have the ability to generate Exceptions.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-835	Task	Closed	Brandon Culver	Import Sig WES Reagent types into LOPS Repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-828	Story	Closed	Michael Livingston	The system shall provide a way to define the control sample type for controls reported in the Pipeline Launch Request.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-821	Story	Verified	Vasiliy Kumaev	The system shall allow users to associate an Exception with an assay instance.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-820	Story	Verified	Vasiliy Kumaev	The system shall provide users with the ability to configure Exception Codes.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-819	Story	Closed	Brandon Culver	The system shall have the ability to record the Disposition of an assay.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-780	Story	Verified	Vasiliy Kumaev	The system shall have the ability to record the Sample Expiration Date	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-769	Task	Closed	Vasilii Sevriugin	Enable change of consumers on the fly so that it does not require service restart	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 03 (20 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-833	Task	Closed	Mai Ton-Nu	Import Signatera WES reagent types into LOPS Staging environment	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-813	Task	Closed	—	Prepare for and execute LOPS UX demo for Lab Ops	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-812	Task	Closed	Michael Livingston	Platform Integration Demo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-808	Task	Closed	Matt Smith	Correct GitLab Pipeline to Send Updated Jar File to Artifactory	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-806	Task	Closed	Vasiliy Kumaev	Create script for creating assay request message transactions in bulk	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-791	Story	Closed	Chris Lott	The system shall have the ability to display the testing lab on the sample	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-789	Tweak	Verified	Vasiliy Kumaev	Automatically set bootstrap.servers url for producers to be based on env deployed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-786	Task	Closed	Michael Livingston	Spike - Create design for how to include the controls in the pipe launch request and pipe results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-785	Task	Closed	—	Test LIMS - LOPS integration - accessioning workflow for samples	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-782	Tweak	Closed	Chris Lott	The system shall have the ability to scan one or more sample barcodes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-768	Task	Closed	Vasilii Sevriugin	Implement database changes to enable pulling from transaction types, etc	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-767	Task	Closed	Vasilii Sevriugin	Add Spring service to GitLab pipelines	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-766	Task	Closed	Vasilii Sevriugin	Get current version of the SprintBoot service working	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-756	Task	Closed	Matt Smith	SPIKE - Finalize the documentation for a method for deploying the reagent sync objects	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-741	Task	Closed	Vasilii Sevriugin	Create developer documentation to guide them in the use of the new schema registry	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-739	Tweak	Verified	Vasiliy Kumaev	Failed to process action 'LoadArray'. Reason: Failed to process action 'AdjustTrackItemInv'. Reason: Failed to convert u	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-738	Task	Closed	Matt Smith	Assess which requirements are impacted by changes in to the assay request message schema	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-736	Tweak	Verified	Michael Livingston	Update the Germline and Somatic Sample Template to received required and no auto reciept.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-670	Task	Closed	Vasiliy Kumaev	Create a way to generate accessioning message transactions in bulk	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-534	Task	Closed	Vasiliy Kumaev	Review LV and JBoss Logging to Combine into a Single Log File	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 02 (24 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-793	Task	Closed	—	Integration tracking with Signatera team	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-792	Tweak	Closed	Michael Livingston	Update Sequencing Run Complete Message Processing to check the Instrument Serial Number	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-779	Task	Closed	Brad Garrett	Spike - Gap assessment for file-based instrument data transfers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-775	Task	Closed	Brad Garrett	Create design plan for approving and rejecting the datasets and how to trigger the completion of assays	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-761	Story	Closed	Vasiliy Kumaev	When the Accessioning Kafka message is processed, the system shall produce a Sample Event Kafka Message in JSON format	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-758	Task	Closed	—	Review and update Automation status for test cases	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-757	Task	Closed	Brandon Culver	Document custom fields for Reagent sync	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-755	Story	Closed	Michael Livingston	Update: The Pipeline Launch Request shall be in JSON format and contain information required by Pipeline.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-753	Task	Closed	Brad Garrett	Spike - Create design plan for handling "WES Analysis + Primer Design" assay request and pipeline results	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-752	Tweak	Closed	Brandon Culver	The system shall provide users with the ability to search the array list page by barcode.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-751	Tweak	Closed	Brandon Culver	The system shall have the ability to record a plate barcode on an array.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-743	Story	Closed	Brad Garrett	The system shall have the ability to define the Sample as Archive	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-734	Task	Closed	Michael Livingston	The system shall provide a way for users to view run, batch, and sample level results that are recorded from a Pipeline	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-725	Sub-task	Closed	Brandon Culver	Create Design Description and PSD for Reagent Shipping	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-724	Sub-task	Closed	Brandon Culver	Support SQE Team for Testing of Reagent Shipping	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-723	Story	Closed	Vasiliy Kumaev	Update: When the system parses the Assay Request Management messages, the required data will be captured in the appropr	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-695	Tweak	Closed	Brad Garrett	The system shall allow the addition of samples to a Released Request	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-687	Story	Verified	Brandon Culver	Implement the ability to ship some portion of a reagent lot and requalify that group of containers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-686	Story	Verified	Brandon Culver	Record manufacture date on reagent lot	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-682	Task	Closed	—	Spike - In-line QC reagent qualification	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-677	Story	Verified	Michael Livingston	Provide the ability to track plate usage at the well level	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-634	Task	Closed	Vasilii Sevriugin	Develop the script that registers schemas	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-370	Sub-task	Closed	—	Matt + Chris: Confirm whether we can do short-term fix now until larger rework is done for IMT	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-366	Tweak	Closed	Matt Smith	Fix hardcoded bootstrap.servers url to be based on env deployed	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

LOPS Sprint 01 (17 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-759	Task	Closed	Brad Garrett	Outline Action Execution flow for Instrument RunData processing	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-754	Task	Closed	Matt Smith	Update LOPS External JAR Version	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-750	Task	Closed	Matt Smith	Set INTF Service Monitoring Interval From Environment Variable	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-744	Task	Closed	—	Update Sample Management Event Schema in Kafka	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-735	Task	Closed	—	Create Prototype for WES on X Extraction Quant	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-730	Task	Closed	Brad Garrett	Spike Task: Prototype Array transfers and Array method assignment in the workflow module	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-726	Task	Closed	Brandon Culver	Reagents Demo Prep	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-721	Task	Closed	—	SPIKE - Investigate and draft the documentation for a method for deploying the reagent sync objects	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-719	Task	Closed	Vasilii Sevriugin	Create LOPS Kafka User and ACLS Permissions	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-718	Tweak	Closed	Vasiliy Kumaev	The system shall have the ability to record the Line Item IDs, External References, and Assay Params associated with an	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-717	Task	Closed	Vasilii Sevriugin	Add Kafka Keystore Mapped Directory to Containers	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-645	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-581	Sub-task	Closed	Brad Garrett	Spike - Confirm specifications/thresholds are working correctly for text values in array params	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-576	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate run level QC metrics.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-575	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate batch level QC metrics.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-574	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate sample level QC metrics.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)
LOPS-452	Tweak	Verified	Vasilii Sevriugin	Switch Kafka consumers to use Kafka event hub	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-243)

No Sprint Assigned (608 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9943	Sub-task	Closed	Michael Livingston	Dev Testing Bug in Rerun Query for Verso Worklist generation.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9932	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.14.1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9897	Task	Closed	Bob Ruff	Research for Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9870	Sub-task	Closed	Bob Ruff	Dev Testing - Filter out Cancelled Samples During runlog processing.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9807	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.15.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9788	Defect	Verified	Michael Livingston	After Test Method is Canceled for the Sample the next Test Process is added automatically.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9783	Story	Verified	Bob Ruff	RunLog Processing: Filter Cancelled Samples When Entering Results Directly on Samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9782	Defect	Closed	Michael Livingston	Sequencing Run is not completed for Assay43 and Assay44	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9768	Defect	Verified	Michael Livingston	Bug in Rerun Query for Verso Worklist generation.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9735	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.13.1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9733	Story	Verified	Michael Livingston	Error While Doing QC Review for sgNIPT cfDNA Pool Quantification Review	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9707	Task	Closed	Michael Livingston	Update CODEOWNER permissions	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9689	Sub-task	Closed	Bob Ruff	Dev Testing - Filter biobanked out of sample list page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9667	Task	Closed	Kristina Feller	SgNIPT Automated Regression for 1.0.14.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9662	Sub-task	Closed	Bob Ruff	Dev Testing - Verso Worklist Retrieval for biobank Issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9645	Sub-task	Closed	Bob Ruff	Dev Testing - When samples are biobanked, previous storage needs to be cleared	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9635	Sub-task	Closed	Brandon Culver	Dev Testing - Verify Automated Qubit file import	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9633	Sub-task	Closed	Bob Ruff	Dev Testing - Ability to process biobanking runlog in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9600	Defect	Verified	Mehmet Ali Eken	Pipeline Request cannot be sent for QIP	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9575	Story	Verified	Bob Ruff	Filter biobanked out of sample list page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9571	Sub-task	Closed	Michael Livingston	Dev Testing - Verso runlog auto-uploading	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9570	Task	Closed	Bob Ruff	Dev Testing - Sample status is not changes if Qubit runlog was processed.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9550	Defect	Verified	Michael Livingston	Parameter List sgNIPT cfDNA Normalization for Manual Recovery 1 var.Evaluation has flipped datatypes for param Matrix/Mi	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9547	Defect	Verified	Michael Livingston	cherry pick individual rework samples from completed assays throw RI error	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9537	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.13.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9522	Story	Verified	Michael Livingston	Update Post Lib Quant 'Accept Partial' Logic	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9521	Story	Verified	Bob Ruff	Verso Worklist Retrieval for biobank Issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9520	Story	Verified	Bob Ruff	When samples are biobanked, previous storage needs to be cleared	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9511	Sub-task	Closed	Brandon Culver	Dev Testing - Control Assay QC Report only outputs results related to corresponding batch-level	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9510	Sub-task	Closed	Brandon Culver	Dev Testing - Handling of Plasma Isolation runlog Error Code 2 scenario	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9509	Sub-task	Closed	Brandon Culver	Dev Testing - Update Qiasymphony runlog to allow for ingestion of error message	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9496	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.12.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9481	Story	Verified	Brandon Culver	Cherrypick tfMRD Updates to Plasma Isolation Runlog Processing - Mislabeled Streck Barcode	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9402	Sub-task	Closed	Michael Livingston	Dev Testing - Algs pipe trigger failed due to multiple PipeJobIds on Algs Assay(Assay45))	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9383	Story	Verified	Brandon Culver	Update Assay QC Control Report Results query to filter results by input barcode plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9382	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.11.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9374	Sub-task	Closed	—	Dev Testing - Update Biobanking worklist query to allow full loading of 96-tube rack	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9352	Sub-task	Closed	Michael Livingston	Dev Testing - Standard Test Methods added automatically during Manual Steps (gDNA	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9336	Tweak	Verified	Gianna Bell-Eunice	Remove Rework Cherry Picking button from Array List page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9334	Sub-task	Closed	Michael Livingston	Dev Testing - Cancelled tests are preventing the assay from updating to Completed status	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9325	Tweak	Closed	Michael Livingston	Update gDNA Extraction Quant QC Review to fail wells against "Plate-Level Sample QC" param	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9322	Defect	Verified	Kathy Dao	Update Biobanking worklist query to allow full loading of 96-tube rack	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9261	Sub-task	Closed	Bob Ruff	Dev Testing - Update cfDNA Pool Quant QC Review to Approve/Reject Results	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9260	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Dedicated tramstop for Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9233	Tweak	Verified	Kathy Dao	Update worklist folder mapping	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9224	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.10.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9218	Sub-task	Closed	—	Implement QIP sample import processor	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9217	Sub-task	Closed	—	Import sample csv file task and processor	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9190	Sub-task	Closed	Brandon Culver	Dev Testing - Update to generate Pool Number and DestWell from alternating wells on HYB Day 2 Plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9186	Story	Verified	Brandon Culver	Update Automated Qubit File Import	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9185	Task	Closed	Brandon Culver	SPIKE: Investigate ongoing NOREAD error handling for Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9184	Task	Closed	Mehmet Ali Eken	Proficiency Sample Data Product	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9183	Sub-task	Closed	Kathy Dao	Dev Testing - Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9182	Sub-task	Closed	Brandon Culver	Dev Testing - Update Cherry Picking Logic	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9177	Sub-task	Closed	Gianna Bell-Eunice	Dev testing - Update Qiasymphony runlog to allow for ingestion of error message.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9176	Story	Verified	Brandon Culver	update Qiasymphony runlog parsing to allow for ingestion of error message as they come from the instrument	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9171	Task	Closed	—	PSPC LOPS Test Automation script: ASSAY-43 failed on ProcessResultAction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9148	Sub-task	Closed	Michael Livingston	Dev Testing - Create Task Definitions for sgNIPT gDNA Sequencing Prep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9124	Defect	Verified	Lev Evstratov	Runlog service fails to process non UTF-8 encoded files	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9121	Defect	Verified	Brandon Culver	Fix available rework count logic in Hybrid Day 1 worklist cherry pick task	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9116	Sub-task	Closed	—	Dev Testing - Resolve Assay Request message processing failure when Exception subfields are present	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9110	Defect	Verified	Michael Livingston	Standard Test Methods added automatically during Manual Steps (gDNA	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9106	Defect	Verified	Michael Livingston	Worklists cannot be downloaded in Assay 43 and 44	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9086	Sub-task	Closed	Brandon Culver	Dev Testing - Verso Retrieve Runlog not completing Racking Process Test	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9084	Sub-task	Closed	Brandon Culver	Dev Testing - Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9082	Tweak	Verified	Brandon Culver	Wrong worklist folder name - LRPCR LibPrep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9080	Sub-task	Closed	Mehmet Ali Eken	Dev testing - cfDNA Hyb Day1 worklist has incorrect parameters order	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9076	Defect	Verified	Mehmet Ali Eken	cfDNA Hyb Day1 worklist has incorrect parameters order	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9075	Sub-task	Closed	Bob Ruff	Dev Testing - Update to automate Push to source Array	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9074	Sub-task	Closed	Michael Livingston	Dev Testing - Create Task Definitions for General Manual Array Steps and for sgNIPT cfDNA PostLig Purification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9069	Story	Verified	Michael Livingston	Guided Workflow: gDNA Sequencing Prep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9062	Tweak	Verified	Kathy Dao	Associate consumable to to current gDNA Primer Plates and Array Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9044	Defect	Verified	Mehmet Ali Eken	Pacbio Sequencing - RunId allows manual data entry although it is a dropdown list	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9033	Sub-task	Closed	Gianna Bell-Eunice	Dev testing - Update Qiasymphony runlog to allow for ingestion of error message.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9027	Task	Closed	Bob Ruff	Remove sample limit for biobanking verso retrieve	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9026	Sub-task	Closed	Brandon Culver	Dev Testing - Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ genes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9020	Story	Verified	Mehmet Ali Eken	QIP Testing - Create Rack Worklist Node with updated min/max limits	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9019	Task	Closed	Kathy Dao	User Guide M7 Updates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9016	Tweak	Verified	Brandon Culver	Capture Worklist - Update to generate Pool Number and DestWell from alternating wells on HYB Day 2 Plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9013	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.8.0 & 1.0.9.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9001	Story	Verified	Mehmet Ali Eken	Entry point for QIP	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-9000	Story	Verified	Mehmet Ali Eken	Entry point for Proficiency samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8991	Sub-task	Closed	Michael Livingston	Dev Testing - Automate Qubit file import to eliminate manual data entry	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8966	Story	Verified	Brandon Culver	Capture Worklist - Update prioritization of wells from HYB Day 1 Plates	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8965	Task	Closed	Brandon Culver	Reagent Lot Migration for YALP e2e	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8964	Task	Closed	Mearat Hou	Update keh producer class to produce message with the latest schema	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8963	Task	Closed	Mearat Hou	Update kafka consumer lambda to process the updated schema	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8961	Task	Closed	Gianna Bell-Eunice	SPIKE - evaluate which worklists need to exclude samples with cancelled tests	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8958	Sub-task	Closed	Brandon Culver	Dev Testing - cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8956	Task	Closed	Mearat Hou	Deployment for labxuat-01 (e2e) environment	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8955	Task	Closed	Mearat Hou	Deployment for yalp-dev-01 environment	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8954	Task	Closed	Kathy Dao	Spike Task: Manual test is added when test is not available causing sequencing run issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8953	Story	Verified	Bob Ruff	Update cfDNA Pool Quant QC Review to Approve/Reject Results	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8947	Sub-task	Closed	Michael Livingston	Dev Testing - Normalization run data file fails in processing because contains failed samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8930	Defect	Verified	Brandon Culver	Verso Retrieve Runlog not completing Racking Process Test	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8929	Defect	Closed	—	cfDNA Pool Quant QC Review is not Releasing Pool Quant Results	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8925	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.6.1 ePatch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8914	Sub-task	Closed	—	Assist automation team in runlog integration service testing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8907	Sub-task	Closed	Mehmet Ali Eken	Dev Testing - LOPS Support of QIP testing of control samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8906	Story	Verified	Mearat Hou	Implement Reagent Container Usage Endpoint	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8905	Story	Verified	Mearat Hou	Implement Reagent Containers API Endpoints	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8904	Story	Verified	Mearat Hou	Implement Reagent Types API Endpoints	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8903	Story	Verified	Mearat Hou	Implement Reagent Lots API Endpoints	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8901	Story	Verified	Mearat Hou	Add additional fields to LV1.0 datasource connector column.include.list	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8899	Story	Verified	Bob Ruff	Update to automate Push to source Array	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8890	Story	Verified	Michael Livingston	Verso runlog auto-uploading	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8884	Task	Closed	Bob Ruff	Fix Typo in NtrStorageWorklistGenerator task	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8881	Sub-task	Closed	Bob Ruff	Dev-Testing - Implementation of a reagent verification in LOPS to prevent the use of expired tapestation reagents	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8879	Sub-task	Closed	Michael Livingston	Dev Testing - cfDNA Rework Scenario Handling (PostLib Quant) should support 1 half of the plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8877	Defect	Verified	Michael Livingston	Normalization run data file fails in processing because contains failed samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8872	Sub-task	Closed	Lev Evstratov	Failing to process "sgNIPT cfDNA Library Prep A-Tailing" rundata	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8845	Task	Closed	Bob Ruff	Investigate lack of samples transferring to 'Marked for Biobank' in LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8844	Story	Verified	Lev Evstratov	Instrument Integration Runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8831	Story	Verified	Gianna Bell-Eunice	Update Qiasymphony runlog to allow for ingestion of error message.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8828	Task	Closed	Bob Ruff	Additional Pipeline Integration Query Changes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8824	Defect	Verified	Brandon Culver	M6 - cfDNA Hybrid Day 1 worklist has "SourcePosition":null and "Concentration":null	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8823	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.7.0 + 1.0.7.1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8818	Story	Verified	Gianna Bell-Eunice	Dedicated menu and tramstops for Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8797	Sub-task	Closed	Bob Ruff	Dev Testing - Add the ability to clear custody from trackitems	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8763	Story	Verified	Michael Livingston	Guided Workflow: General Manual Array Steps and for cfDNA PostLig Purification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8761	Tweak	Verified	Mehmet Ali Eken	"sgNIPT gDNA Sequencing RunDetails" v2 test method is underconfigured	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8760	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant) should support 1 half of the plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8754	Sub-task	Closed	Brandon Culver	Dev Testing - Barcoding Runlog processor loads correct gene sibling sample to barcoding plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8751	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.6.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8745	Task	Closed	Lev Evstratov	Fix conductor deployment for Runlog integration service	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8728	Defect	Verified	Catalin Parvana	VersoDefaultRunLogHeaders is not recorded in SDI group	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8727	Sub-task	Closed	Michael Livingston	Dev Testing - Update reserving spaces for retrieval process for rework samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8726	Sub-task	Closed	Bob Ruff	Dev Testing - Leave positions empty on new lib prep plates to accommodate rework	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8725	Story	Verified	Michael Livingston	Update reserving spaces for retrieval process for rework samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8709	Defect	Verified	Brandon Culver	Resolve Assay Request message processing failure when Exception subfields are present	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8707	Sub-task	Closed	—	Dev Testing - Update Instrument type on Array Method for sgNIPT cfDNA Post Ligation Purification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8706	Tweak	Verified	Kathy Dao	Update Instrument type on Array Method for sgNIPT cfDNA Post Ligation Purification	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8701	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.5.2	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8690	Sub-task	Closed	Kathy Dao	Dev Testing - PacBio Sequencing - Add Run ID to LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8688	Sub-task	Closed	Kathy Dao	Dev Testing - Associate New Primer Plate to Lib Amp Array Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8686	Sub-task	Closed	Kathy Dao	Dev Testing - New reagent and primer plate for HC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8683	Task	Closed	Mearat Hou	Request Kafka team to remove incident, incidentitem, and instrument topics and associated schema registries and update t	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8682	Story	Verified	Brandon Culver	Update Cherry Picking Logic	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8680	Sub-task	Closed	Mearat Hou	Dev Testing - Ability to Delete Reagent Lots by Reagent Users	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8677	Story	Closed	Mehmet Ali Eken	LOPS Support of QIP testing with verso	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8663	Sub-task	Closed	—	Dev Testing - Restrict "take custody" to just lab managers/supervisors	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8662	Sub-task	Closed	Bob Ruff	Dev Testing - Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8658	Story	Verified	Bob Ruff	Add the ability to clear custody from trackitems	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8652	Story	Closed	Bob Ruff	Update Calculation for Control and Sample Evaluation for sgNIPT cfDNA Postlib Quant Review AM	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8651	Defect	Verified	Brandon Culver	cfDNA Hybrid Day 1 worklist has "SourcePosition":null and "Concentration":null	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8645	Defect	Closed	Mehmet Ali Eken	Update Calulation for Half Plate 1 and 2 for Control Failures	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8640	Story	Verified	Kathy Dao	New Job Type in sgNIPT for members of the Reagent team to delete lots.	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8637	Task	Closed	—	LRPCR Guided workflows / validations - Kathy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8624	Task	Closed	Kathy Dao	Hypercare Fixes - Kathy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8621	Task	Closed	Kathy Dao	FF E2E Support - Kathy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8609	Sub-task	Closed	—	(LV1.0) Create new reagents_lops_user LV account as clone of intf_lops_user	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8608	Sub-task	Closed	—	(wes/wgs) Create new reagents_lops_user LV account as clone of intf_lops_user	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8552	Story	Closed	Kathy Dao	User prep for e2e	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8551	Story	Verified	Gianna Bell-Eunice	Associate New Primer Plate to Lib Amp Array Method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8538	Task	Closed	Catalin Parvana	Support Fast Follow E2E	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8534	Story	Closed	Gianna Bell-Eunice	Reagent prep for e2e	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8522	Defect	Verified	Brandon Culver	Investigate incorrect gene barcoding TM being added incorrect gene sample	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8521	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Update Verso logic to allow for StartTime and EndTime rather than TimeStamp	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8510	Sub-task	Closed	Michael Livingston	Dev Testing - Create a validation on the entry of flowcell id for HC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8500	Task	Closed	Michael Livingston	Refactor generation of cfDNA Hybridization Worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8489	Task	Closed	Lev Evstratov	Fail fast adjustments for runlog integration service startup	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8484	Story	Verified	Michael Livingston	sgNIPT cfDNA PostLib Quant Control Swap	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8480	Defect	Closed	Mehmet Ali Eken	Half Plate – Level Sample QC Evaluation calculates all wells, regardless of whether they are occupied or not.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8479	Sub-task	Closed	Gianna Bell-Eunice	(sgNIPT) Create new reagents_lops_user LV account as clone of intf_lops_user	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8477	Story	Verified	Mearat Hou	Update Reagent API to send "valid" in instances of in-line valid	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8437	Story	Verified	Kathy Dao	Restrict access to "Add Test" button	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8435	Story	Verified	Mehmet Ali Eken	LOPS Support of QIP testing of control samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8433	Defect	Verified	Michael Livingston	Algs pipe trigger failed due to multiple PipeJobIds on Algs Assay(Assay45))	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8418	Story	Closed	Brandon Culver	Update Runlog Processing for cfDNA Hybridization	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8416	Defect	Verified	Mehmet Ali Eken	Jasper report has the wrong AM for Assay-43	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8390	Story	Verified	Gianna Bell-Eunice	Update Verso logic to allow for StartTime and EndTime rather than TimeStamp	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8344	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing- Update Reagent Lot List pages New button/Queries	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8343	Sub-task	Closed	—	Test Automation Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode vali	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8342	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing - Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for m	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8340	Sub-task	Closed	Gianna Bell-Eunice	Dev Testing-Update Master Data for MM FFHC-BEAD1 for Alternate Part	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8333	Sub-task	Closed	Lev Evstratov	Add into RunLogConfigPolicy‎ specific Verso store and retrieval nodes for gDNA	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8326	Story	Verified	Mehmet Ali Eken	Update Error validating Barcodes after Plasma isolation runlog rerun	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8228	Task	Closed	—	WesOnX/WGS - GUIDE - Verify that user can download Extraction Quant Worklist	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-8225	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on trackitem transformer	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8224	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on reagentlot transformer	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8223	Story	Closed	Mearat Hou	Stop instrument record sync and remove associated transformer from reagent-sync-service	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8222	Story	Closed	Mearat Hou	Stop incident record sync and remove associated filter and transformer from reagent-sync-service	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8221	Task	Closed	Mearat Hou	Clean up references to u_kafkamessage from kafka_connect_lv_connector.json in config repo	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-8211	Defect	Verified	Brandon Culver	LRPCR Pipe Results Message query should convert UUIDs and maintain case	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8206	Defect	Verified	Brandon Culver	LRPCR Pipe Results Message query should convert UUIDs to strings	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8200	Story	Verified	Michael Livingston	Automate Qubit File Import to Eliminate Manual Data Entry	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8194	Defect	Verified	Brandon Culver	LRPCR Pipe launch request must provide unique sequencing sample id for reused controls	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8144	Story	Verified	Gianna Bell-Eunice	Update Master Data for MM FFHC-BEAD1 for Alternate Parts	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8133	Story	Verified	Michael Livingston	Runlog should fail when primers are not loaded	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8129	Task	Closed	Michael Livingston	Please populate the attached table	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8125	Task	Closed	Bob Ruff	Update IT for single gDNA sample having multiple LRPCR Assays	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8120	Task	Closed	Lev Evstratov	Spike: investigate how deduplication works in intfservice	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8102	Task	Closed	Bob Ruff	Status IQ: dashboard to show rework samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8092	Story	Verified	Brandon Culver	Prevent users from putting incorrect gene child sample on a gene specific plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8082	Story	Verified	Mehmet Ali Eken	PacBio Sequencing - Add Run ID to LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8078	Task	Closed	Mehmet Ali Eken	Repository: Update Trackitem U_Barcode column max_length value	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8074	Task	Closed	Michael Livingston	Prevent rir_api_user account from continuously getting disabled	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8071	Sub-task	Closed	Mehmet Ali Eken	AM - sgNIPT cfDNA Pool Quant Review - 1 (Pool Dilution Worklist)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8070	Sub-task	Closed	Michael Livingston	AM - sgNIPT cfDNA Capture - 1 (Pool Quant Worklist)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8069	Sub-task	Closed	Mehmet Ali Eken	AM - sgNIPT cfDNA Hybridization - 1 (Capture - HC Day 2 Worklist)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8068	Sub-task	Closed	Michael Livingston	AM - sgNIPT cfDNA PostLib Quant Review - 1 (Hybridization - HC Day 1 Worklist)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8067	Task	Closed	Lev Evstratov	Create list of reagents with units config issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8066	Story	Verified	Michael Livingston	Add new HC Lib Prep barcode suffix -SGBND for EDTA Plate (Biorad)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8065	Story	Verified	Bob Ruff	Leave positions empty on new lib prep plates to accommodate rework	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8064	Story	Verified	Brandon Culver	Barcode collision check for HC Day 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8062	Story	Verified	Kathy Dao	Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a link to a filt	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8060	Story	Verified	Bob Ruff	Ability to process biobanking runlog in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8059	Task	Closed	Kathy Dao	Update sgNIPT cfDNA Pool Sequencing Process MD in sgNIPT Prod and associated samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8050	Tweak	Verified	Kathy Dao	Update Assay-00041 (AT-00020)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8049	Story	Verified	Mai Ton-Nu	Update basic Search, Scan Id Query fields and update list page to view barcode from the Select Trackitem Page (LV_TrackI	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8036	Defect	Verified	Kathy Dao	LR-PCR Quantification/DNA Concentration result outputs for #SAT should display 100	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8026	Defect	Verified	Lev Evstratov	Incorrect gene racking workitem completed after processing Verso retrieval runlog	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8024	Story	Verified	Gianna Bell-Eunice	Update Reagent Lot List pages New button/Queries	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8019	Story	Verified	Michael Livingston	Create a validation on the entry of flowcell id for HC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8012	Story	Verified	Mehmet Ali Eken	Update the processing of sequence complete message	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-8006	Story	Verified	Michael Livingston	gDNA Pre-Extraction worklist included the samples that are placed into the Storage	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7983	Story	Closed	Mehmet Ali Eken	Create new functionality to accept the upload start sequencing message	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7976	Task	Closed	Mikhail Novokshchenov	[TEST ONLY] Hybrid Capture End Tail and LR-PCR Barcode Run Log with Retests Issue	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7975	Story	Verified	Brandon Culver	cfDNA Pool Quant Plating runlog is not processed after sample was sent to ReQuant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7966	Task	Closed	Mehmet Ali Eken	Verify that all control lots have quality sample with ffe thresholds populated	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7959	Task	Closed	Kathy Dao	[TEST ONLY] Identify current state for new LRPCR Sequencing Run Loading Scenarios	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7958	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.3.1 ePatch 3	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7948	Task	Closed	Gianna Bell-Eunice	Investigate all control reagent types to make sure consumable class is set to control	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7947	Task	Closed	Mai Ton-Nu	Manual Updates in Prod: sgNIPT cfDNA Manual Recovery Reverted Items, Update to original State	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7945	Tweak	Verified	Mai Ton-Nu	Repository: sgNIPT cfDNA Manual Recovery Reverted Items, Update to original State	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7938	Defect	Closed	Bob Ruff	Unable to Promote gDNA Pool Dilution Results due to unable to Perform QC review on Tapestation Pool Quant Plate.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7933	Task	Closed	—	tfMRD - Add Merge Request Bot to GitLab LabWorkflows repo	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-7921	Task	Closed	Catalin Parvana	WES/WGS - Add Merge Request Bot to GitLab LabWorkflows repo	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7918	Task	Closed	Bob Ruff	Verify Well Position Formatting (Padded Zeros) for Worklists - LRPCR	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7917	Story	Verified	Mai Ton-Nu	Update Well Position Formatting (Padded Zeros) for Worklists - HybridCapture	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7915	Story	Verified	Bob Ruff	Implementation of a reagent verification in LOPS to prevent the use of expired tapestation reagents	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7912	Sub-task	Closed	Lev Evstratov	Runlog processing from transaction object	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7911	Story	Verified	Mai Ton-Nu	Side Bar for sgNIPT Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7910	Defect	Verified	Brandon Culver	Barcoding Runlog Loader fails to load correct sample when processing samples with 2 sibling aliquots	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7906	Story	Verified	Gianna Bell-Eunice	Update Group Test Method sgNIPT gDNA Pool Quant-Dilution Process- Seperate Quant steps from dilution test	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7900	Story	Verified	Mai Ton-Nu	Update WILookup add Test Edit Role to "Select & Add Tests to Assay" button	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7896	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.3.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7894	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.0.2.1 ePatch 2	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7891	Defect	Verified	Gianna Bell-Eunice	LOPS decrementing water master mix in mL rather than uL	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7889	Story	Closed	Brandon Culver	Update sgNIPT gDNA Normalization processor & policy for v1.0 Norm runlog	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7888	Story	Verified	Brandon Culver	Add Attachment Element to SDIGroup Maint page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7886	Story	Closed	Michael Livingston	Update CreateChildSample action to allow pooling of multiple plasma samples in the same assay	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7884	Defect	Verified	Lev Evstratov	Unable to generate Verso Retrieval when samples are queued for multiple gene assays	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7872	Task	Closed	Gianna Bell-Eunice	[SPIKE] Investigate Incorrect Gene Samples being plated during barcoding	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7859	Task	Closed	Kathy Dao	Spike Ticket: Child Sample Creation for Assay 41 investigation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7837	Task	Closed	Catalin Parvana	Add Merge Request Bot to GitLab LabWorkflows repo	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7832	Story	Verified	Gianna Bell-Eunice	sgNIPT cfDNA Pool Dilution Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transfe	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7826	Defect	Verified	Mai Ton-Nu	Rounding of the DNA Concentration Average value leads to confusion in Pass/Fail evaluation.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7823	Story	Verified	Kristina Feller	sgNIPT cfDNA Worklists Generation Updates for Increase number of plates accepted in cfDNA Pool Quantification array and	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7822	Story	Verified	Mai Ton-Nu	sgNIPT cfDNA Hybrid (Day 1) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and transf	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7821	Story	Verified	Brandon Culver	sgNIPT cfDNA Capture (Day 2) Updates for Increase number of plates accepted in cfDNA Pool Quantification array and trans	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7819	Story	Verified	Gianna Bell-Eunice	Update sgNIPT Isolation and Extraction to stop users from continuing after failed barcode validation for manual steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7763	Story	Verified	Michael Livingston	Update the validation against creating child samples when unreleasing and releasing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7759	Defect	Verified	Brandon Culver	sgNIPT LRPCR Samples Do Not Appear in Queue for parallel Gene Assay	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7754	Defect	Verified	Michael Livingston	The CfDna Pool Quant Worklist generated with duplication of the same pool 4 times	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7751	Story	Verified	Kathy Dao	Update Equipment types and Counts for TM sgNIPT cfDNA PostLig Pur RunDetails	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7738	Story	Verified	Mehmet Ali Eken	Update Master Mix lot picker to allow "in-line valid" status	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7736	Defect	Closed	—	Creating reagents mix has error: Failed to adjust container amount. Check the use amount and units.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7732	Tweak	Verified	Brandon Culver	Update 'sgNIPT gDNA Sequencing Run' plate suffix with "-PBSP"	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7726	Task	Closed	Mai Ton-Nu	Create SQL Script for Reagent Clean-up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7724	Task	Closed	Mai Ton-Nu	Preparing Local Environment for Iso/Extraction Demo	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7720	Story	Closed	Kathy Dao	Update reagent type in HC step	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7710	Story	Verified	Mai Ton-Nu	Add additional reagents to HC Day 1 Master Mix	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7709	Story	Verified	Kathy Dao	Update sgNIPT gDNA Pool Dilution RunDetails TM Consumable and Instrument Assignments	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7705	Tweak	Verified	Mehmet Ali Eken	gDNA LR-PCR Quant and Pooling worklist button ids are mixed up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7704	Task	Closed	Kathy Dao	Import Instruments from WES/WGS PROD into sgNIPT Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7697	Defect	Closed	Brandon Culver	LR-PCR Quant Plating is not parsing/populating Zone Data Entry fields	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7696	Story	Verified	Brandon Culver	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ genes.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7685	Defect	Verified	Brandon Culver	gDNA Norm runlog is not processing due to column headers	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7676	Task	Closed	Bob Ruff	sgNIPT LOPS is not Producing Kafka Messages	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7675	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for Missing NTC Sample	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7674	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for NTC Sample Presence in Available Lots	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7671	Task	Closed	Brandon Culver	Provide LOPS sgnipt UI and DB access for Arun	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7642	Story	Closed	Deon Hughes	Grant -a access for EPS and some LOPS members	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7575	Defect	Verified	Lev Evstratov	Failed to process action 'ProcessResultAction'. Reason: null when processing Normalization rundata	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7553	Task	Closed	Michael Livingston	Failed to check data. Failed to process action 'EnterDataItem'. Reason: Illegal attempt to update a released calculated	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7551	Defect	Closed	Michael Livingston	gDNA Normalization runlog is not processing.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7538	Sub-task	Closed	Lev Evstratov	Rework scenario for runlog integration service	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7537	Sub-task	Closed	Lev Evstratov	Adjust runlog processors to process rundata from transaction table (u_intftransobject)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7535	Defect	Closed	Lev Evstratov	Samples are not available in the Sample List after received via API. Plasma Isolation Worklist cannot be generated.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7526	Task	Closed	Brandon Culver	Update CODEOWNER permissions	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7510	Task	Closed	Gianna Bell-Eunice	shakedown support - PROD - verso worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7491	Task	Closed	Brandon Culver	Update Assay Request Message Schema version from 19 to 21	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7464	Task	Closed	Laura Dietrick	Import Lab Ops Users to sgNIPT Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7462	Defect	Closed	Michael Livingston	Sample List is empty no samples available	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7447	Story	Verified	Lev Evstratov	Update array id prefix to FFPla	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7439	Defect	Closed	—	QC Review page is not loading	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7407	Task	Closed	Mikhail Novokshchenov	SgNIPT Automated Regression for 1.0.1.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7405	Task	Closed	Bob Ruff	Deploy sgNIPT M1 to daybeforedeploy-01 Environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7384	Task	Closed	Mai Ton-Nu	Prepare Staging-802 Environment for Demo	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7373	Defect	Closed	Brandon Culver	Add REST role to all Actions (MD update)	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-7368	Task	Closed	Gianna Bell-Eunice	release management tasks	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7367	Task	Closed	Gianna Bell-Eunice	redeploy LabVantage Workflows to oncpspcintegration-01	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7364	Task	Closed	—	Add illumina sequencers master data	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7343	Story	Closed	Gianna Bell-Eunice	Restrict "take custody" to just lab managers/supervisors	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7330	Task	Closed	Mai Ton-Nu	Investigate EPS - Max Rows Retrieved for Consumable Lots & Multi Scan	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7328	Story	Verified	Laura Dietrick	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7326	Task	Closed	Laura Dietrick	Create intf_lops_user account and password for sgNIPT PROD account	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7314	Defect	Verified	Michael Livingston	cfDNA Hybrid (Day 1) Worklist returns SourcePosition: E04 instead of SourcePosition: F05 .	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7298	Task	Closed	Bob Ruff	Deploy sgNIPT to Standalone Integration Instances	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7288	Task	Closed	—	SgNIPT Automated Regression for 1.0.0.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7245	Defect	Verified	Michael Livingston	Cannot See trackitems during lot master mix creation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7244	Defect	Verified	Michael Livingston	Plasma Manual Isolation-Child sample created without Barcode after TM is completed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7239	Task	Closed	Michael Livingston	E2E Issue creating master mix	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7238	Story	Verified	Lev Evstratov	Update System Transaction Types to only process sgNIPT messages	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7222	Task	Closed	Michael Livingston	Investigate shakedown issue with missing verso retrieval worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7206	Defect	Verified	Michael Livingston	The name of the LR-PCR Pooling Worklist is incorrect.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7199	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 45	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7197	Task	Closed	Kathy Dao	Design and Investigate for Side Bar	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7193	Task	Closed	Mai Ton-Nu	Design and Investigate for Side Bar (Demo)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7188	Defect	Verified	Michael Livingston	Incorrect Dataset Status PendingAutoAppEval After Releasing/Unreleasing with Auto-Approval Enabled	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7187	Story	Closed	Brandon Culver	Update Well Position Formatting (Padded Zeros) for Worklists - Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7169	Story	Verified	Catalin Parvana	Test only: LOPS fails to process ARM message if Measurement is not present in SamRep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7128	Task	Closed	—	Assess passwords for Prod and Non-Prod integration/api users	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7125	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.2.1.0	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7119	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC Reports	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7118	Story	Verified	Mehmet Ali Eken	Cherrypick shared functionality from tfMRD - Assay QC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7112	Story	Verified	Michael Livingston	Cherrypick shared functionality from tfMRD - Plasma Isolation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7102	Story	Verified	Brandon Culver	Refactor PlateToRackNormalizationProcessor to not use deprecated ParamData pojo	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7092	Story	Verified	Mehmet Ali Eken	cfDNA Rework Scenario Handling (Pool Quant)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7090	Tweak	Verified	Kathy Dao	Master Data Clean Up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7089	Task	Closed	—	Disable the OOTB stats logging in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7063	Task	Closed	Catalin Parvana	New Kafka ARM consumer group for sgNIPT stage	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7062	Task	Closed	Lev Evstratov	RIR integration(API)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7061	Task	Closed	Lev Evstratov	Separate LOPS Integration - Pipe Sequencing Complete - Test Only	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7060	Story	Closed	Lev Evstratov	Separate LOPS Integration - SamRep	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7058	Story	Verified	Laura Dietrick	Globally unique keys for sgNIPT	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7057	Task	Closed	Brandon Culver	Separate LOPS Integration - Active Directory	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7055	Sub-task	Closed	Lev Evstratov	Separate LOPS Integration - File Shares	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7054	Task	Closed	Lev Evstratov	Separate LOPS Integration - Pipe Sequencing Analysis Complete	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7053	Story	Closed	—	Separate LOPS Integration - Pipe Sequencing Manifest	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7050	Story	Closed	—	New Kafka ARM consumer group for sgNIPT Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7049	Task	Closed	—	Spike: When to fork the separate repo	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7048	Task	Closed	—	Spike: Branch and Merge Strategy between Products	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7047	Defect	Verified	Mehmet Ali Eken	sgNIPT cfDNA Hybridization worklist cannot be downloaded for cfDNA Rework Scenario.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7031	Task	Closed	Mai Ton-Nu	E2E: Complete Iso/Ext for 935680575.2-2-BMS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7029	Task	Closed	Ize Imai	Hotfix (1.2.0.2) Follow manual steps in LOPS prod per attached confluence page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7023	Task	Closed	Brandon Culver	Create sgNIPT-specific repo branches	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7020	Task	Closed	Brandon Culver	Configure LabVantage on Production sgNIPT RDS Instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7017	Story	Verified	Mai Ton-Nu	Hide non-sgNIPT specific buttons on the QC Batch and Historical QC Batch List pages	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7007	Defect	Closed	Michael Livingston	LR-PCR Quant worklist cannot be generated due to missing barcoding plates in the list.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-7004	Defect	Closed	Mehmet Ali Eken	Results from Quant Plate to Source Plate cannot be promoted	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6997	Task	Closed	—	Test Only: Assay 44 in new sgNIPT prod instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6996	Task	Closed	Kavya Sampelli	Test Only: Assay 43 in new sgNIPT prod instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6995	Task	Closed	Kavya Sampelli	Test Only: Assay 41 in new sgNIPT prod instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6987	Story	Verified	Laura Dietrick	Hide non-sgNIPT specific buttons on the Boxes List page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6984	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on the Manage Samples List page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6983	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Historical Plates and Gels page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6982	Story	Verified	Gianna Bell-Eunice	Hide non-sgNIPT specific buttons on Plates and Gels page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6980	Task	Closed	Ize Imai	LOPS Prod Support - Fix Plasma Samples stuck in Pending AutoApprEval (EPS-117139)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6978	Defect	Verified	Brandon Culver	sgNIPT gDNA Sequencing Run and sgNIPT cfDNA Sequencing Run are failing.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6977	Story	Verified	Lev Evstratov	Create the pipeline for instrument integration runlogs	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6976	Task	Closed	Lev Evstratov	Create MVP Runlog Microservice	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6975	Story	Verified	Lev Evstratov	Update sgnipt worklist policies for folder hierarchy	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6968	Task	Closed	Mai Ton-Nu	Spike - check all LOPS files to ensure we use padded zero any time the number <10.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6967	Task	Closed	Gianna Bell-Eunice	Spike - investigate QCB issue from shakedown	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6965	Task	Closed	Gianna Bell-Eunice	Deploy to gsp-integration01 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6955	Defect	Verified	Brandon Culver	gDNA Pool Purification and gDNA Library Prep worklists return number of samples instead of number of pools.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6953	Story	Closed	Michael Livingston	Remove control from failed half plate (cfDNA Postlib Quant)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6950	Task	Closed	Gianna Bell-Eunice	Deploy to pspcdaybefore environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6948	Task	Closed	Gianna Bell-Eunice	Spike - investigate control swaps in array	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6941	Task	Closed	Brandon Culver	LOPS Prod Support - Fix Plasma Samples stuck in Pending AutoApprEval	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6938	Defect	Closed	Michael Livingston	Wrong number of samples and sample positions are returned in the Worklist.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6936	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 44	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6932	Task	Closed	Gianna Bell-Eunice	Deploy release to labxe2e-01 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6930	Task	Closed	Gianna Bell-Eunice	Deploy release to labxe2e-01 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6929	Task	Closed	—	Samples that have not yet been received should not appear on plasma iso worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6921	Story	Verified	Michael Livingston	Allow LOPS to check output tube barcode for cfDNA extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6918	Task	Closed	—	LabVantage licenses for separate LOPS instances	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6914	Task	Closed	Gianna Bell-Eunice	Redeploy hotfix release to sgniptintegration-02 with database refresh	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6896	Defect	Verified	Michael Livingston	sgNIPT cfDNA Pool Quant Plating runlog doesn't create cfDNA Pool Quant Plate.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6888	Task	Closed	Catalin Parvana	SgNIPT Automated Regression for 1.2.0.2 hotfix	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6887	Task	Closed	Mai Ton-Nu	Creation of Verso in LOPS production with EQ-607223	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6885	Story	Closed	Howard LaHurreau	Spike - investigate impact to reagent validation and instrument integration with split prod instances	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6883	Task	Closed	Deon Hughes	Create api user id for automation scripts to use	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6882	Task	Closed	Gianna Bell-Eunice	Deploy hotfix release branch to sgnipt-integration-02 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6878	Task	Closed	Kathy Dao	Update and Enable Users in LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6877	Task	Closed	Mai Ton-Nu	Add Equipment ID EQ-607454 to LOPS Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6858	Task	Closed	Mearat Hou	Spike: Investigate slow responsiveness with Reagent API.	team: wrong team (id=5b43a98c-6ed8-4099-b571-ff0267bb1e13)
LOPS-6856	Task	Closed	Ize Imai	Follow manual steps in LOPS prod per attached confluence page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6850	Defect	Verified	Michael Livingston	gDNA LR-PCR Quant Worklist can generate the worklist for Quant Plates.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6848	Tweak	Verified	Michael Livingston	gDNA LR-PCR Quant and Pooling worklist button ids are mixed up	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6838	Task	Closed	Gianna Bell-Eunice	Create new reagent types in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6829	Task	Closed	Sri Gorantla	Move reagent type objects out of lv_exported into lv_exported_init	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6827	Defect	Verified	Mehmet Ali Eken	Assay-45 is not processing if Assay-44 is Failed.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6822	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 43	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6821	Task	Closed	Kathy Dao	Update reagent lot status for sgNIPT shakedown and launch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6819	Defect	Verified	Brandon Culver	LRPCR Controls not appearing in Assay QC - Controls Analysis Review	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6818	Defect	Verified	Mehmet Ali Eken	Wrong Jasper report generated for gDNA samples that received > 1 LRPCR request	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6816	Defect	Verified	Lev Evstratov	Pipeline Results Not Ignored for Dispositioned Assays	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6809	Defect	Verified	Brandon Culver	LRPCR Pipeline Launch Request Fails When Samples Are in Multiple Wells	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6804	Story	Verified	Michael Livingston	gDNA Rework Scenario Handling (gDNA Pool Quant Review)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6783	Task	Closed	Bob Ruff	Reagent data query for e2e - Mike Niemuth	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6782	Tweak	Verified	Lev Evstratov	CloudConfigClient need to include environment related headers	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6777	Story	Verified	Michael Livingston	Update sgNIPT Plasma Isolation PL	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6774	Task	Closed	Mai Ton-Nu	Test Only: Releasing and unreleasing results with auto-approval	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6769	Story	Verified	Michael Livingston	Add u_containerbarcode field to the container tab on the reagent lot view page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6764	Story	Verified	Lev Evstratov	Temporary override of using a cloud server for authentication credentials	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6737	Tweak	Verified	Ize Imai	Add sgNIPT gDNA LibPrep Nuclease Treatment to order.txt file	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6716	Task	Closed	Catalin Parvana	PSPC Daybeforedeploy regression	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6713	Story	Verified	Brandon Culver	Search by Natera Barcode and Plate barcode on file sample page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6709	Task	Closed	Kathy Dao	Need to re-export LV_ReagentLotMaint after reducing the list of roles.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6708	Task	Closed	Catalin Parvana	sgNIPT PSPC integration - Investigate ASSAY-00041 Processing Failures	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6699	Defect	Closed	—	Gene Specific Config missing : sgNIPT AM - sgNIPT gDNA GENE LR-PCR Barcoding - 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6697	Task	Closed	Michael Livingston	Update NR0701 & NR0541 reagent type in repository	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6687	Defect	Verified	Michael Livingston	e2e: Upload runlog file issue with Retest plasma isolation 2nd instance	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6686	Defect	Verified	Michael Livingston	Rework for LRPCR: Ensure correct assays assigned	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6680	Defect	Verified	Brandon Culver	Rack to Plate Worklists displaying incorrect zero padding for wells with two-digit columns	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6678	Task	Closed	Vasilii Sevriugin	Configure Cloud Config for S3ClientPolicy and RestClientPolicy (PROD)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6676	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 42	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6666	Task	Closed	Deon Hughes	Deploy LOPS 1.2.0.0 to LOPS PROD - sgNIPT Release 1	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6665	Task	Closed	Gianna Bell-Eunice	Deploy to PSPC environment (5/5/2025)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6657	Task	Closed	Deon Hughes	Update NAT-810354	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6655	Task	Closed	—	Import reagents from 1.0 for launch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6654	Task	Closed	Ize Imai	Test Only: Event plan not triggering correctly during retest	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6647	Task	Closed	Catalin Parvana	Include 'daily' env name into list for labworkflow Kafka schema register - register-schemas.sh	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6644	Story	Verified	Kathy Dao	Create new Group TM for sgNIPT cfDNA Pool Quant Process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6639	Task	Closed	Mai Ton-Nu	sgNIPT Regression Testing - Mai	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6638	Task	Closed	Laura Dietrick	sgNIPT Regression Testing - Laura	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6637	Task	Closed	Krishna Tanuku	sgNIPT Regression Testing - Krishna	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6636	Task	Closed	Gianna Bell-Eunice	sgNIPT Regression Testing - Gianna	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6635	Task	Closed	Sri Gorantla	sgNIPT Regression Testing - Sri	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6634	Task	Closed	Olawale Dada	sgNIPT Regression Testing - Wale	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6633	Task	Closed	Mai Ton-Nu	sgNIPT Regression Test Planning - Mai	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6632	Task	Closed	Laura Dietrick	sgNIPT Regression Test Planning - Laura	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6631	Task	Closed	Krishna Tanuku	sgNIPT Regression Test Planning - Krishna	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6630	Task	Closed	Gianna Bell-Eunice	sgNIPT Regression Test Planning - Gianna	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6629	Task	Closed	Sri Gorantla	sgNIPT Regression Test Planning - Sri	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6628	Defect	Verified	Mehmet Ali Eken	cfDNA Extraction rundata PL is truncating leading zeros from matrix barcodes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6627	Task	Closed	Olawale Dada	sgNIPT Regression Test Planning - Wale	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6626	Defect	Verified	Krishna Tanuku	HBA Primer Plate 1 Mapping is incorrect	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6605	Task	Closed	Brandon Culver	Update rsync props to fix db stability	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6603	Defect	Verified	Lev Evstratov	sgNIPT: Assay 43: cfDNA Post Library Prep Quantification - Uploading a quant results file doesn't release sample dataset	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6597	Defect	Verified	Ize Imai	SgniptTransferToGDNASequencingRunArray Action does not create transfer record for the creation of the seqrun plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6596	Task	Closed	Vasilii Sevriugin	Spike - Instrument integration framework	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6594	Defect	Closed	Michael Livingston	sgNIPT LRPCR (gDNA) Sequencing Run Complete message is not processed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6589	Story	Verified	Michael Livingston	Residual Quant should not require approvals.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6588	Defect	Verified	Michael Livingston	Issue with the parent sample status not syncing from completed to inprogress.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6586	Defect	Verified	Mehmet Ali Eken	sgNipt: Assay 44 - Well content is not unloaded from Source Wells during gDna Library Prep runlog processings	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6585	Defect	Verified	Michael Livingston	sgNipt: Assay 44 - Error creating LRPCR Sequencing Manifest (CONNECT BY loop in user data)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6574	Story	Verified	Ize Imai	QC Review Quant Files need to accept mew character	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6573	Story	Verified	Vasilii Sevriugin	Update worklist generated filename to include seconds	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6570	Tweak	Verified	Krishna Tanuku	Move sgNIPT cfDNA Residual Quant Racking worklist policy node to correct parent node folder	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6569	Defect	Verified	Ray Ward	sgNipt: Assay 44 - Error processing 'sgNIPT gDNA Library Prep' runlog	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6568	Story	Verified	Sri Gorantla	Re-implement ticket that was reverted	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6567	Tweak	Verified	Brandon Culver	Update format of runDate param on sgNIPT gDNA Sequencing Run rundetails to yyyymmdd	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6566	Story	Verified	Ize Imai	Update Capture Worklist for partial Plate use case	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6564	Story	Verified	Bob Ruff	SMRT Link issues	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6563	Story	Verified	Brandon Culver	RunLogConfigPolicy node for step with expected plate suffix -LRPOOLQ	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6561	Story	Verified	Lev Evstratov	CFTR Rack Array Layout for positions E01, E02 and E03 must be left blank.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6556	Defect	Verified	Krishna Tanuku	sgNIPT gDNA Pool Dilution volume calculation update	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6552	Task	Closed	Brandon Culver	Deploy release to e2e environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6551	Defect	Verified	Vasilii Sevriugin	INTF Errors	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6547	Defect	Verified	Kathy Dao	Config to post Initial Assays-43 and 44 is missing.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6545	Task	Closed	Gianna Bell-Eunice	Deploy to sgNIPTintegration-02 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6529	Task	Closed	Deon Hughes	PROD access for Hypercare Team	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6527	Task	Closed	Kathy Dao	KD Ticket Design/Support - Sprint 41	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6524	Task	Closed	Ray Ward	Support with sgNIPT e2e (Sprint 41)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6523	Story	Verified	Mehmet Ali Eken	Reimplement - Allow sample rework from Assay QC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6522	Story	Verified	Michael Livingston	Reimplement - Configure Point of Return From Assay QC for sgNIPT cfDNA Assay Template (AT-00037)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6521	Story	Verified	Sri Gorantla	Update gDNA Library Prep Worklist Policy Node names	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6520	Story	Verified	Ize Imai	Allow users to generate HBB Barcoding worklist with more than 1 assay	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6519	Story	Verified	Brandon Culver	Enable system to handle matrix gDNA samples queued for multiple assays	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6515	Defect	Verified	Lev Evstratov	Pass/Fail Assay buttons do not work when multiple samples are selected	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6512	Defect	Verified	Brandon Culver	sgNipt: Assay 44 - Barcoding workitems are not completed after barcoding runlog is processed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6509	Story	Closed	Olawale Dada	Test only: (Assay-44 Testing)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6508	Story	Closed	Gianna Bell-Eunice	Test only: (Assay-43 Testing)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6507	Story	Verified	Brandon Culver	Update gDNA LR-PCR Pooling Worklist to include Controls	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6505	Task	Closed	Brandon Culver	sgNIPT E2E Support - LR-PCR	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6504	Defect	Verified	Brandon Culver	Update Barcoding Runlog Processing to plate the primer	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6503	Story	Verified	Ize Imai	Ability to generate worklist containing multiple plates for different gene types	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6497	Tweak	Verified	Mehmet Ali Eken	Update user login attempts setting to 10	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6490	Defect	Verified	Vasilii Sevriugin	LOPS doesn't send Assay-43 ASSAY_COMPLETED status message	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6489	Story	Verified	Mehmet Ali Eken	Enable gDNA LR-PCR Quant Plating runlog processing support of runlog with 2+ plates.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6488	Defect	Verified	Ize Imai	sgNIPT Hybrid Capture (cfDNA) Pipe Launch Request runFolder is constructed incorrectly when Seq Run Complete v3 is proce	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6485	Story	Closed	Laura Dietrick	Test only: gDNA Retest from extractions (Assay-41)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6481	Task	Closed	Ray Ward	Support with dryrun and e2e	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6476	Task	Closed	—	Platform Automated Regression	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6475	Task	Closed	Vasilii Sevriugin	Configure datadog to record reagent validation api information	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6474	Task	Closed	—	Validate all new reagents have been created (or will be deployed) in production	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6473	Defect	Verified	Vasilii Sevriugin	sgNIPT gDNA Pre-Extraction runlog is not processing.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6472	Task	Closed	Vasilii Sevriugin	Deploy to PSPC and e2e environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6469	Task	Closed	Monish Grover	Troubleshoot PSPC Issue with automation failing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6468	Defect	Closed	Deon Hughes	CURRENTSTORAGEUNITID is not set for child samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6458	Task	Closed	Vasilii Sevriugin	Configure S3ClientPolicy and RestClientPolicy post deployment for E2E	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6454	Defect	Verified	Vasilii Sevriugin	sgNIPT Hybrid Capture (cfDNA) Pipeline Launch Request fails	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6442	Task	Closed	Amy Nguyen	KT session with LIS team on pipeline launch, seq run complete	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6441	Defect	Closed	Monish Grover	gDNA LR-PCR Quant Result - Sample QC(Evaluation) is not displayed on QC review after manual data entry changes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6439	Defect	Verified	Brandon Culver	Give NtrJsonWorklistGenerator the ability to specify sample listing sort order	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6438	Task	Closed	Bob Ruff	Review sgnipt objects in production and document manual removals that need to be done for launch.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6431	Task	Closed	Brandon Culver	Deploy current build to sgniptintegration-02 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6430	Story	Verified	Ray Ward	Update cfDNA barcode primer plates sequences in E2E environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6419	Task	Closed	Kathy Dao	Manual assay-44 testing in PSPC environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6418	Task	Closed	Vasilii Sevriugin	LRPCR Deploy update to labxe2e-01 environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6416	Defect	Verified	Gianna Bell-Eunice	gDNA LR-PCR Plating is not getting assigned to the sample after gDNA LR-PCR Barcoding is completed.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6415	Task	Closed	Vasilii Sevriugin	Manually Deactivate ITT000005 transaction type	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6408	Story	Verified	Gianna Bell-Eunice	New reagent and primer plate for HC	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6405	Task	Closed	Bob Ruff	Ensure transaction types for Illumina Sequencing Run Complete message are properly set to Active or Offline	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6403	Defect	Verified	Ize Imai	cfDNA Library Prep Racking spec always fails	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6402	Task	Closed	Ize Imai	Support PSPC Manual assay execution	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6399	Tweak	Verified	Brandon Culver	Update Rack Worklist RefType with cfDNA Racking TM	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6397	Defect	Closed	Ray Ward	sgNIPT cfDNA Residual Quant - Prohibit sample approval for the sample with failed Spec condition.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6395	Task	Closed	Kathy Dao	Manual assay-43 testing in PSPC environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6394	Task	Closed	Catalin Parvana	Investigate PSPC Automation issues with assay-43	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6393	Task	Closed	—	Updated list of WES / WGS manual test cases	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-6391	Sub-task	Closed	Ize Imai	Create IT for multi-gene LR-PCR scenario	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6388	Story	Verified	Vasilii Sevriugin	Update HybCap Day 2 Worklist Generation to have condensed positions for partial/half plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6387	Task	Closed	Gianna Bell-Eunice	Deploy latest sgNIPT build to PSPC environment	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6386	Story	Verified	Sri Gorantla	Allow Lab Ops Operators/Managers to edit array barcodes	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6383	Task	Closed	Catalin Parvana	Samples for Automation dry run (E2E)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6382	Story	Verified	Lev Evstratov	Need the ability to cherry pick individual retest samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6381	Task	Closed	Brandon Culver	sgNIPT E2E Support - Qubit Quant Plating	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6379	Story	Verified	Monish Grover	Master Data for gDNA Pool Quant Plating	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6377	Task	Closed	Kathy Dao	KD Ticket Grooming/Design - Sprint 40	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6376	Task	Closed	Kathy Dao	Document Assay-41 Rework	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6373	Defect	Verified	Lev Evstratov	Source Wells for HC in random order	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6371	Task	Closed	Klead Fusha	Make file storing generic in ProcessResultAction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6367	Task	Closed	Mai Ton-Nu	Update NAT-802226 expected amount units to uL	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6366	Task	Closed	Ize Imai	Manually change the NtrWorklistGeneratorPolicy to fix HybCap Day 2 Worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6358	Task	Closed	—	Add Amy and Elyssa to Prod	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6347	Task	Closed	Klead Fusha	Import NR0750 from Production in patch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6333	Defect	Verified	Ray Ward	Transfer method from sgNIPT gDNA Sequencing Prep Final Dilution to sgNIPT gDNA Sequencing Run creates a new plate with w	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6332	Defect	Closed	Ray Ward	Manual modification of worklist file	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6330	Task	Closed	—	sgNIPT Automated Regression	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6326	Story	Verified	Ize Imai	Store Pool Concentration value in gDNA Pooling runlog to the resulting pooling array	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6316	Story	Verified	Sri Gorantla	cfDNA PostLib Quant review plate control calculations	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6313	Defect	Verified	Mehmet Ali Eken	Control sample type is blank for Control Analysis Review page for sgNIPT gDNA samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6312	Defect	Verified	Lev Evstratov	sgNipt: Quant plate can't be found during quant file processing if first file processing failed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6311	Story	Closed	Justin Jones	Ensure Extraction Managers are given Extraction Manager Job Type for Launch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6310	Defect	Verified	Mehmet Ali Eken	sgNipt: cfDna Post Lib Prep Quant Results file processing fails for a plate with controls	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6302	Defect	Closed	Lev Evstratov	Flaky: LOPS failed to process sample - work item list is empty	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6295	Defect	Closed	Lev Evstratov	Flaky: LOPS DB Closed Connection Issue	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6293	Defect	Verified	Leonid Garin	Accept Partial Action at "QC Review gDNA Extraction Quantification" not updating passing samples "sgNIPT gDNA Extraction	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6287	Defect	Verified	Krishna Tanuku	Ligation AM applied and completed during prior A-Tailing runlog processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6282	Tweak	Verified	Brandon Culver	Update end repair runlog processor to look for trackitem.u_containerbarcode and not trackitem.u_barcode when processing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6275	Defect	Verified	Ray Ward	Remove Sample barcode from HybCapDay1 worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6246	Defect	Verified	Michael Livingston	Cancelled tests are preventing the assay from updating to Completed status	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6245	Task	Closed	Deon Hughes	Verify that all Extraction and Isolation users have the same security dept at the Verso instruments	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6228	Story	Verified	Ize Imai	Update sgNIPT Rack to Plate Loader class to find source or aliquot sample for downstream assays	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6227	Task	Closed	Mehmet Ali Eken	Evaluate and adjust labworkflows/lv_exported/Configuration/database/debezium_access.sql to be able to execute in product	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6219	Defect	Verified	Mai Ton-Nu	Pools listed in cfDNA Pool Dilution worklist are listed in reverse order and do not have padded zeros	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6210	Story	Verified	Ray Ward	Associate reagents and equipment to SDI Groups for Assay-00044	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6172	Story	Verified	Krishna Tanuku	Creation of New cfDNA Aliquots Residual Quant Racking MD and Updates to Assay Template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6167	Story	Verified	Olawale Dada	Creation of New cfDNA Aliquots Library Prep Racking MD and Updates to Assay Template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6161	Story	Verified	Monish Grover	Add barcode scan to LV_TrackItemMultiLookup for easier and more compliant master mix process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6141	Story	Verified	Leonid Garin	Support Assay Request Message v1.19 (Request Params)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6127	Tweak	Verified	Ray Ward	sgNIPT gDNA HBA LR-PCR Plating Variant is set to 1.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6122	Story	Verified	Gianna Bell-Eunice	Creation of New gDNA Aliquots LR-PCR Racking MD and Updates to Assay Template	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6120	Tweak	Verified	Michael Livingston	Allow users to search for arrays that are in PIPE analysis	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6075	Story	Verified	Krishna Tanuku	Extraction Managers and Operators need access to the 'Add' button on the QCB list page.	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6067	Story	Verified	Swati Giri	Update ISO/EXT Child Barcode Calculations for 14mL and 15mL Plasma Samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6020	Story	Verified	Kathy Dao	LOPS can validate barcodes for a set of samples proceeding through plasma manual/partial isolation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-6000	Defect	Verified	Abdul Aziz	Extra 'Assay' option in filter menu	team: wrong team (id=5d902f7c-696c-4ad4-847d-f4f13d289105)
LOPS-5997	Story	Verified	Lev Evstratov	Allow users to evaluate gDNA Extraction quantification results on the source plate and perform follow up actions as need	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5988	Task	Closed	Gianna Bell-Eunice	SPIKE - confirm that OOB functionality meets the requirements for assigning expiry dates based on Manufactured and recei	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5980	Story	Verified	Ize Imai	Generalize the implementation for Plate to Rack (gDNA Normalization)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5975	Story	Verified	Vasilii Sevriugin	Missing a Loose Tube Loader that's able to perform by position load from RunLog	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5951	Tweak	Verified	Kathy Dao	MD Cleanup	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5942	Story	Closed	Laura Dietrick	Test only: cfDNA Retest from Assay QC scenarios	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5941	Story	Closed	Gianna Bell-Eunice	Test only: gDNA Retest from Assay QC scenarios	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5882	Defect	Closed	Joeseph Colca	Array method being set incorrectly for "Current Detail" which this fails generating SEQ plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5854	Sub-task	Closed	—	5 - Create Spec	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5853	Sub-task	Closed	—	4 - Create MR	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5852	Sub-task	Closed	—	3 - Implement	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5851	Sub-task	Closed	—	2 - Create Branch	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5850	Sub-task	Closed	—	1 - Link Requirements	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5836	Story	Verified	Meghana Joshi	The system shall provide EPS Admins the ability to modify assay dispositions.	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5833	Story	Verified	Sri Gorantla	sgNIPT gDNA Pool Dilution volume calculation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5827	Tweak	Verified	Mehmet Ali Eken	Refactor sgNIPT Sequencing Run Complete processors to only look for one sequencing array	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5815	Story	Verified	Michael Livingston	Samples that have not been received in LOPS should not appear in the plasma isolation worklist	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5785	Story	Verified	Lev Evstratov	Update logic for Overall Result in Assay QC Sample Analysis Review page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5784	Story	Verified	Krishna Tanuku	Update color coding of metric evaluations (Assay QC reports)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5783	Story	Verified	Lev Evstratov	Update pipeline-result processor to allow PASSED_WITH_WARNINGS to auto-disposition as Passed	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5720	Story	Closed	Monish Grover	Create worklists using column format (A01, B01, C01,...) to order samples when sourcewell is present	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5696	Story	Verified	Sri Gorantla	LOPS Support for E2E Residual Quant	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5651	Story	Verified	Michael Livingston	cfDNA Rework Scenario Handling (PostLib Quant)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5648	Task	Closed	Gianna Bell-Eunice	Document LOPS entites/objects created and valid status of each for SQE Automation support	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5637	Story	Verified	Gianna Bell-Eunice	Associate reagents and equipment to MD for Assay-00043	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5627	Story	Verified	Mai Ton-Nu	Increase number of plates accepted in cfDNA Pool Quantification array and transfer method	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5525	Task	Closed	Kathy Dao	Document initial Assay-44 Happy Path Steps	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5504	Task	Closed	Deon Hughes	Create sgNIPT instruments in LOPS	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5387	Story	Verified	Sri Gorantla	Add u_containerbarcode field to the container tab on the reagent lot maint page	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5365	Sub-task	Closed	—	Evaluate test automation scripts for k8s build on integration env	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5322	Tweak	Verified	Krishna Tanuku	Remove LibPrep Quant test method, param list, spec	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5321	Story	Verified	Liubomyr Skorokhod	(Test only) gDNA sequencing manifest generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5305	Story	Verified	Ray Ward	The system must be able to support Biobankable workflow via sample disposal status	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5284	Sub-task	Closed	—	Evaluate test automation scripts for K8s on Staging-100	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5280	Epic	Closed	Ariel Jirau	Epic to track work effort to migrate labworkflows workloads from Rancher to Kubernetes	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-5234	Story	Verified	Lev Evstratov	gDNA LR-PCR Pooling Worklist generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5176	Story	Verified	Alex Pakhunov	gDNA Pool Quant Results Integration - Tapestation Quant file import	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-5084	Story	Verified	Ray Ward	gDNA LR-PCR Spectramax Quant Results Integration - Runlog Parsing	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4907	Story	Verified	Ize Imai	Allow LOPS to check PLM output tube barcode prior to proceeding with Isolation process	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-4188	Story	Verified	Michael Livingston	Support re-use of a control from the same plate	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2778	Task	Closed	Bob Ruff	Pipeline integration query update (LOPS-PIPE new kafka messages from WES)	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2734	Story	Verified	Jonathan Quinn	Support actions at cfDNA Extraction results review - cfDNA Manual Recovery	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2627	Story	Verified	Mehmet Ali Eken	LOPS Support of Proficiency samples	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2607	Story	Verified	Klead Fusha	SMRT Link - Run design template file generation	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2485	Story	Verified	Olawale Dada	Test only: gDNA downstream assay rework points	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-2440	Defect	Verified	Dennis Lin	Capture Quant > Run Details - Reagents not validated as required	team: wrong team (id=c29b176c-f6eb-40f8-b724-e9f3c6225610-221)
LOPS-2051	Task	Closed	Deon Hughes	Create new users for initial sgNIPT go-live	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)
LOPS-1652	Story	Verified	Lev Evstratov	Notify SamRep that samples were disposed/biobanked	team: wrong team (id=88290074-e51a-4d05-8480-60cd34d0ac68)

Missing Code Reviewer

WARNING 71.4% pass rate (798 violations / 2787 applicable)

Tickets at or past Code Review status should have a code reviewer assigned.

Sprints with no violations for this check are not shown. Use the filter buttons above to change the sprint range.

LOPS-tfMRD-63-20260223 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9755	Story	Verified	Klead Fusha	Controls failed at cfDNA Quant need to be dropped at lib amp	code_reviewer: null (status=Verified)
LOPS-9405	Story	Code Review	Jonathan Quinn	tfMRD MTM Test Method	code_reviewer: null (status=Code Review)
LOPS-9394	Story	In SQA Review	Klead Fusha	ReQuant Lib Amp Quant	code_reviewer: null (status=In SQA Review)

LOPS-tfMRD-62-20260209 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9770	Defect	Closed	Hani Yakan	Error message during 'send to LOPS' returns wrong location	code_reviewer: null (status=Closed)
LOPS-9348	Story	Verified	Klead Fusha	ReQuant Size Selection Quantification	code_reviewer: null (status=Verified)
LOPS-8699	Tweak	Verified	Hani Yakan	Update LOPS API endpoint to connect to new PIPE endpoint without Signatera name	code_reviewer: null (status=Verified)

LOPS-tfMRD-61-20260126 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9756	Tweak	Closed	Jonathan Quinn	Requirements for MTM Validation	code_reviewer: null (status=Closed)

LOPS-tfMRD-60-20260112 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9397	Story	Verified	Klead Fusha	Assay Templates / Assay Codes	code_reviewer: null (status=Verified)

LOPS-tfMRD-59-20251229 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7775	Defect	Closed	Hani Yakan	System allows progression in workflow without required Instruments In Size Selection	code_reviewer: null (status=Closed)
LOPS-7549	Story	Closed	Jonathan Quinn	Manual Recovery 1 Options for Transfer	code_reviewer: null (status=Closed)
LOPS-7522	Defect	Closed	Hani Yakan	System allows progression in workflow without required Run Details on Size Selection 1 and Size Selection 1 steps	code_reviewer: null (status=Closed)

LOPS-tfMRD-58-20251215 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8952	Defect	Closed	Valeria Vargas	Dashboard: Fix Run time (HH) calculated field in Pipeline run status analysis	code_reviewer: null (status=Closed)

LOPS-tfMRD-54-20251020 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8993	Defect	Closed	Valeria Vargas	Fix for Runlog Upload with TNP samples	code_reviewer: null (status=Closed)

LOPS-tfMRD-52-20250922 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8099	Defect	Closed	Mikhail Terpugov	ProcessRunCompleteMessage failure in Shakedown	code_reviewer: null (status=Closed)

LOPS-tfMRD-51-20250908 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7723	Defect	Closed	Klead Fusha	TNP'ed samples' status from Rejected Plate stays "InProgress"	code_reviewer: null (status=Closed)

LOPS-tfMRD-50-20250825 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-7767	Defect	Closed	—	Runfolder information missing in Assay QC page	code_reviewer: null (status=Closed)

LOPS-tfMRD-48-20250728 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7846	Tweak	Closed	Ron Enson	tfMRD upgraded UI - Assays - Assay Templates	code_reviewer: null (status=Closed)
LOPS-7833	Defect	Closed	—	tfMRD UI improvements - Fix crash in site menu	code_reviewer: null (status=Closed)

LOPS Sprint 20250714 (47) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7484	Story	Closed	—	Histology: WES Incidents Page	code_reviewer: null (status=Closed)
LOPS-7480	Story	Closed	—	Histology: WGS Dissection Page	code_reviewer: null (status=Closed)
LOPS-7478	Story	Closed	—	Histology: WES Pathology Review Page	code_reviewer: null (status=Closed)
LOPS-7476	Story	Closed	—	Histology: WGS H&E Staining Page	code_reviewer: null (status=Closed)
LOPS-7474	Story	Closed	—	Histology: WGS Embedding Page	code_reviewer: null (status=Closed)
LOPS-7403	Tweak	Closed	Ray Ward	Propagation of sgNIPT LOPS 1.2.0.4 production ePatch to WES/WGS	code_reviewer: null (status=Closed)

LOPS-tfMRD-46-20250630 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7341	Defect	Closed	Hani Yakan	Size Selection Re-Quant worklist incorrectly counts SampleNum:"88" irrespective on number of samples in requant	code_reviewer: null (status=Closed)
LOPS-7272	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Packages Shipping, Racks - All Packages	code_reviewer: null (status=Closed)
LOPS-7271	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Packages Shipping, Racks - Expected Packages	code_reviewer: null (status=Closed)
LOPS-7270	Tweak	Closed	Isaac Vargas	tfMRD upgraded UI - Packages Shipping, Racks - Create Package	code_reviewer: null (status=Closed)
LOPS-7101	Story	Verified	Jonathan Quinn	tfMRD Sidebar Creation	code_reviewer: null (status=Verified)
LOPS-6616	Defect	Closed	—	PerformAutodisposition action throws error: Datasets do not have mandatory BATCH_LANE sdimetric	code_reviewer: null (status=Closed)

LOPS Sprint 20250630 (46) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7280	Defect	Closed	Swati Giri	Capture QC Review. Accept All action - error: Failed to process action 'ReleaseDataltem'.	code_reviewer: null (status=Closed)
LOPS-7252	Defect	Closed	Ray Ward	Assay Request (ITT000002) Transactions Causing Errors - production update	code_reviewer: null (status=Closed)
LOPS-7235	Story	Closed	Swati Giri	Update accessioning filtering - LOPS WES/WGS production instance	code_reviewer: null (status=Closed)
LOPS-7228	Defect	Closed	Ray Ward	Change Mode for ReworkCandidate on QCReviewDataset to resolve poor query performance (production fix)	code_reviewer: null (status=Closed)

LOPS Sprint 20250616 (45) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8046	Defect	Closed	Jonathan Quinn	Pool capture day 1 and 2 runlog processing is throwing a benign error on the Latitude Menu	code_reviewer: null (status=Closed)
LOPS-7210	Defect	Closed	—	Error Executing SQL for LHRTransfer When Transferring Two 'Library Amplification' Plates	code_reviewer: null (status=Closed)
LOPS-7190	Defect	Closed	Klead Fusha	tfMRD: Library Amplification Quant Review plate with 22 passed samples fails QC	code_reviewer: null (status=Closed)
LOPS-7185	Defect	Closed	Dennis Lin	Assay QC for SEQ plate with failed Sample-level post-sequencing QC and failed Run-level post-sequencing QC display empty	code_reviewer: null (status=Closed)
LOPS-6899	Story	Closed	Dennis Lin	New Action Button - Setting of the rework reservation flag	code_reviewer: null (status=Closed)
LOPS-6898	Story	Closed	Dennis Lin	New Page - Historical Normalization Re-Run Samples for the Extraction group	code_reviewer: null (status=Closed)
LOPS-6796	Story	Closed	Dennis Lin	New Page - Normalization Re-Run Samples for the Extraction group	code_reviewer: null (status=Closed)
LOPS-6683	Story	Closed	Brad Garrett	Create Pool Dilution task to display transfer volumes and create -TFSEQ Tubes from TFPOOL tubes	code_reviewer: null (status=Closed)
LOPS-6658	Story	Closed	Mikhail Terpugov	Consolidate Unpack + Verso Store steps	code_reviewer: null (status=Closed)
LOPS-6446	Story	Closed	Mikhail Terpugov	Complete Parent Blood Sample from S2S Shipping	code_reviewer: null (status=Closed)
LOPS-5547	Story	Closed	—	Rework Actions for Sequencing	code_reviewer: null (status=Closed)
LOPS-3924	Story	Closed	Brad Garrett	Assay QC UI - Run Level	code_reviewer: null (status=Closed)

LOPS Sprint 20250602 (44) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6937	Defect	Verified	Kevin Detweiler	In Assay QC, after performing "Approve Selected" action, the "Trigger Assay Auto-Disposition" button does not display	code_reviewer: null (status=Verified)
LOPS-6933	Defect	Closed	Klead Fusha	Run Details for LibAmp Quant Results are missing Run Detail Type and Run Detail Status	code_reviewer: null (status=Closed)
LOPS-6924	Defect	Closed	Kersha Eddy	KingFisher rundetails not applied for Second Bead in Size Selection	code_reviewer: null (status=Closed)
LOPS-6770	Story	Closed	—	Grant users access to SDI Groups	code_reviewer: null (status=Closed)
LOPS-6587	Story	Closed	Brad Garrett	Create TFPOOL tubes from Reviewed TFCAP plate	code_reviewer: null (status=Closed)
LOPS-5819	Tweak	Closed	Ron Enson	Update Array Transfer Method for duplicate reads for Post-Pooling Quantification	code_reviewer: null (status=Closed)
LOPS-5702	Story	Closed	—	cfDNA PostLib Quant Plating (Hamilton Vantage)	code_reviewer: null (status=Closed)
LOPS-2748	Defect	Closed	Kevin Detweiler	Wes On X: Tissue DNA Extraction - Users can proceed with invalid Tissue DNA Plate Barcode	code_reviewer: null (status=Closed)

LOPS Sprint 20250519 (43) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-6641	Story	Verified	Ray Ward	WGS: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	code_reviewer: null (status=Verified)

LOPS Sprint 20250505 (42) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6863	Defect	Closed	Klead Fusha	Manual Data Entry doesn't work after Lib Amp Quant QC Review - "Reject" button	code_reviewer: null (status=Closed)
LOPS-6788	Defect	Verified	Leonid Garin	Reversion of changes to support ARM v1.19 schema resulted in blocked primer design jobs	code_reviewer: null (status=Verified)
LOPS-6734	Defect	Verified	Klead Fusha	Failed to process action 'GenerateWorklistAction'. tfMRD Methylation Deamination Purif	code_reviewer: null (status=Verified)
LOPS-6400	Story	Closed	Brad Garrett	Accept Post-Pool Quant reading results	code_reviewer: null (status=Closed)
LOPS-6250	Defect	Closed	Ariel Jirau	Date time fields for lops packages in the S3 buckets does not match what is expected	code_reviewer: null (status=Closed)
LOPS-4536	Story	Closed	Brad Garrett	Runlog Processing for Post-Pooling Quantification Reading	code_reviewer: null (status=Closed)
LOPS-4511	Story	Closed	Klead Fusha	Worklist Generation for Hybrid Capture (Hybridization)	code_reviewer: null (status=Closed)
LOPS-4507	Story	Closed	Vasiliy Kumaev	Runlog Processing for Post Amplification Quantification Reading	code_reviewer: null (status=Closed)

LOPS Sprint 20250421 (41) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6546	Defect	Closed	Klead Fusha	Descriptive error message should appear in case runlog contains non-existent Source Plate Barcode	code_reviewer: null (status=Closed)
LOPS-6325	Defect	Closed	Ron Enson	Appropriate test method isn't applied once rundata upload successfully finishes	code_reviewer: null (status=Closed)
LOPS-5983	Story	Verified	Kevin Detweiler	Plate List Page > WES Actions: Support Tasks for Plates in the WES Workflow (Test Only)	code_reviewer: null (status=Verified)
LOPS-5817	Defect	Verified	Meghana Joshi	Unable to UnDispose or UnCancel samples that were Disposed/Cancelled directly from the Received state	code_reviewer: null (status=Verified)

LOPS Sprint 20250407 (40) (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6143	Story	Verified	Kevin Detweiler	WES: Sequencing Prep: Validate Run Details Completed	code_reviewer: null (status=Verified)
LOPS-6101	Defect	Closed	—	Extra "WES Actions" button for RO user role on Test -> Plates & Gels List‎	code_reviewer: null (status=Closed)
LOPS-6089	Defect	Verified	Leonid Garin	Error Message when performing Sequencing Prep for G64 (Test only)	code_reviewer: null (status=Verified)
LOPS-5974	Story	Verified	Dennis Lin	Run Details: Support Plate as 'Input/Output'	code_reviewer: null (status=Verified)
LOPS-5921	Defect	Verified	Meghana Joshi	WGS/WES Upload Library Prep Rundata - Required String 'ApplyArrayMethod' is null or empty.	code_reviewer: null (status=Verified)
LOPS-5511	Defect	Ready for SQA	Brandon Culver	Fix queries for tfMRD Post Capture Processing	code_reviewer: null (status=Ready for SQA)
LOPS-5430	Tweak	Closed	—	Updates for Array Method for Pool Dilution	code_reviewer: null (status=Closed)
LOPS-5429	Tweak	Closed	—	Updates for Array Method for Post-Pooling Quantification Reading	code_reviewer: null (status=Closed)
LOPS-5147	Story	Closed	Swati Giri	Blood Extraction Results Review: Display Blood Exceptions for Blood Samples	code_reviewer: null (status=Closed)
LOPS-4926	Story	Closed	Alex Pakhunov	Set tfmrd samples' test method/dataset to Completed upon successful processing of Sequencing Run Complete message and in	code_reviewer: null (status=Closed)

LOPS Sprint 20250324 (39) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6254	Defect	Verified	Leonid Garin	Record Tissue DNA Extraction triggers Exception	code_reviewer: null (status=Verified)
LOPS-6229	Defect	Closed	Sri Gorantla	Unable to test approve QC batch containing samples with Override status set to "Re-run"	code_reviewer: null (status=Closed)
LOPS-6216	Story	Verified	Olawale Dada	Update PacBio Sequencing Plate reagent to include fields to track Serial number, lot number and expiry	code_reviewer: null (status=Verified)
LOPS-6174	Defect	Closed	Anatoly Rybak	Test Only: Rundetails not populated for PEXT rundata consumption	code_reviewer: null (status=Closed)
LOPS-6173	Defect	Closed	Justin Jones	LOPS EQP data entry for QS QC batch missing vortex and Koda Sense	code_reviewer: null (status=Closed)
LOPS-6119	Story	Verified	Kevin Detweiler	WES: Accommodate Samples with Null ‘Date of Collection’ (Test Only)	code_reviewer: null (status=Verified)
LOPS-6066	Defect	Closed	—	Runlog processing is not recorded in SDI Group	code_reviewer: null (status=Closed)
LOPS-6002	Defect	Closed	Monish Grover	gDNA Pre-extraction runlog can only be uploaded for samples, not for NTC	code_reviewer: null (status=Closed)
LOPS-5949	Defect	Verified	Kevin Detweiler	Address Error when generating 'Extraction QC Report' and 'Library QC Report'	code_reviewer: null (status=Verified)
LOPS-5318	Story	Verified	Leonid Garin	Update Pipe Launch Request for WES and G64 to query using old and new attribute types for assayRequestDependencies	code_reviewer: null (status=Verified)
LOPS-2489	Defect	Verified	Kevin Detweiler	Sequencing Prep: Reagents not validated as required (Test Only)	code_reviewer: null (status=Verified)

LOPS Sprint 20250310 (38) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6055	Story	Closed	—	Import for 3 NovaSeq instruments and their sides to LOPS PROD	code_reviewer: null (status=Closed)
LOPS-6028	Tweak	Verified	Leonid Garin	Hybrid Capture - Update seq manifest processor to save Pipeline Json Id to array method	code_reviewer: null (status=Verified)
LOPS-5993	Tweak	Closed	—	Update Threshold for G64 Sequencing Run Metric	code_reviewer: null (status=Closed)
LOPS-5946	Defect	Closed	Bryan Jensen	LOPS doesn't display G64 sample and assay if sample was converted from X16 and was routed to Ashion/Psnl (env with OOnSS	code_reviewer: null (status=Closed)
LOPS-5923	Story	Closed	—	Test only: Verify LOPS can process pipeline results containing value of E+09 magnitude	code_reviewer: null (status=Closed)
LOPS-5909	Story	Closed	—	Test only: Trigger LRPCR pipeline via REST API (Controls)	code_reviewer: null (status=Closed)
LOPS-5840	Story	Closed	Dennis Lin	WES: Create Run Details: Prevent Creation of Non-WES Run Details (Test Only)	code_reviewer: null (status=Closed)
LOPS-5792	Defect	Closed	—	Sample container not assigned to gDNA PEXT to EXT transfer method	code_reviewer: null (status=Closed)
LOPS-5770	Story	Closed	Bryan Jensen	Manual Run Details: Prevent Duplicate Run Details	code_reviewer: null (status=Closed)
LOPS-5391	Story	Verified	Kevin Detweiler	WES: User Access to Extraction Samples Page	code_reviewer: null (status=Verified)
LOPS-4922	Story	Closed	Alex Pakhunov	Update logic for retriggering Pipeline Launch Request (add tfMRD mapping)	code_reviewer: null (status=Closed)

LOPS Sprint 20250224 (37) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5995	Story	Closed	—	Updates to gDNA Extraction workitems to support gDNA Pre-Extraction runlog processing	code_reviewer: null (status=Closed)
LOPS-5959	Defect	Verified	Michael Livingston	sgNipt: Assay 43 - Controls are not propagated during HYB2 -> Pool (Pool Dilution) transfer	code_reviewer: null (status=Verified)
LOPS-5947	Story	Closed	Isaac Vargas	Kafka white listing of new tfMRD assay codes	code_reviewer: null (status=Closed)
LOPS-5903	Story	Closed	—	Test only: LRPCR - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	code_reviewer: null (status=Closed)
LOPS-5823	Defect	Verified	Joeseph Colca	CreateSequenceManifest button has reappeared on Arrays List page	code_reviewer: null (status=Verified)
LOPS-5773	Defect	Verified	Mehmet Ali Eken	Missing/inaccessible "Close Incident" button	code_reviewer: null (status=Verified)
LOPS-5765	Defect	Closed	Sri Gorantla	gDNA Extraction to Normalization Array Transfer Method cannot be performed	code_reviewer: null (status=Closed)
LOPS-5556	Story	Closed	—	Update LOPS API Pipeline Outputs to also send collection kit in requested assay	code_reviewer: null (status=Closed)
LOPS-5400	Story	Closed	—	Test only: NGS Hybrid Capture - Implement ability to process metric output file (HC Pipe Result 2 of 3, controls only)	code_reviewer: null (status=Closed)
LOPS-5388	Story	Verified	Swati Giri	WES: Extraction Samples Page	code_reviewer: null (status=Verified)
LOPS-5373	Story	Closed	—	(Test only) PacBio LR-PCR Invocation of Sequence Manifest for multiple batches	code_reviewer: null (status=Closed)
LOPS-4735	Story	Closed	—	Create gDNA downstream assay reagents in LOPS	code_reviewer: null (status=Closed)
LOPS-2799	Story	Verified	Ron Enson	Hybrid Capture Day 1 Hybridization worklist generation - Impl work	code_reviewer: null (status=Verified)
LOPS-2751	Story	Closed	—	Support actions at gDNA extraction quant results review	code_reviewer: null (status=Closed)

LOPS Sprint 20250210 (36) (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5763	Defect	Closed	Ize Imai	Worklist Generation Select Process Type incorrect	code_reviewer: null (status=Closed)
LOPS-5699	Defect	Verified	Leonid Garin	If multiple genes are requested for a sample, only one 'sgNIPT gDNA Sequencing Run' dataset is marked as Completed when	code_reviewer: null (status=Verified)
LOPS-5672	Defect	Verified	Monish Grover	Worklist cannot be generated and downloaded for Plasma Isolation samples.	code_reviewer: null (status=Verified)
LOPS-5636	Story	Closed	—	Onboarding and KT sessions	code_reviewer: null (status=Closed)
LOPS-5611	Story	Verified	—	Test only: PacBio LRPCR - Record sequencingSampleId to assay attributes	code_reviewer: null (status=Verified)
LOPS-5609	Story	Verified	—	Sequencing Prep: Support Selection of 'Inline QC Valid' Reagents (Test Only)	code_reviewer: null (status=Verified)
LOPS-5598	Defect	Closed	—	The gDNA quantification result does not align with the specified rule conditions.	code_reviewer: null (status=Closed)
LOPS-5594	Story	Verified	Alex Pakhunov	Illumina NGS - Record sequencingSampleId to assay attributes	code_reviewer: null (status=Verified)
LOPS-5542	Defect	Closed	Alex Pakhunov	Page gets stuck during manual child sample creation in Histopathology	code_reviewer: null (status=Closed)
LOPS-5514	Defect	Verified	Michael Livingston	lr-pcr-pb-v0 Assay Template is missing "Gene" column and "Support Gene Routing" check box.	code_reviewer: null (status=Verified)
LOPS-5476	Story	Verified	Krishna Tanuku	Update SourcePosition entry for End Repair worklist to remove "0" between the row and column for the tube position	code_reviewer: null (status=Verified)
LOPS-5442	Defect	Verified	Michael Livingston	Plate calculations for gDNA Extraction quant are incorrect	code_reviewer: null (status=Verified)
LOPS-2804	Defect	Verified	Meghana Joshi	WES Sequencing - Flowcell single use is not being validated	code_reviewer: null (status=Verified)
LOPS-2507	Story	Verified	Vadim Gusev	Pacbio LR-PCR - Implement ability to process metric output file (LRPCR Pipe Result 2 of 3)	code_reviewer: null (status=Verified)

LOPS Sprint 20250127 (35) (11 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5599	Defect	Closed	Meghana Joshi	Unable to create 15mL PLM Falcon tube child samples for multiple samples upon completion of QC Batch	code_reviewer: null (status=Closed)
LOPS-5582	Defect	Closed	Krishna Tanuku	Worklist generation is not supported for the Array Method: AM - sgNIPT cfDNA PostLig Purification - 1	code_reviewer: null (status=Closed)
LOPS-5574	Tweak	Verified	Mikhail Makarin	Add sgNIPT and tfMRD assay codes to LOPS assay code filter	code_reviewer: null (status=Verified)
LOPS-5500	Defect	Closed	Michael Livingston	Calculated values disappear after "Save" button is clicked in Array Zone Data Entry.	code_reviewer: null (status=Closed)
LOPS-5444	Defect	Closed	Ize Imai	Errors when generating End Repair worklists	code_reviewer: null (status=Closed)
LOPS-5371	Defect	Closed	Klead Fusha	Transfer cannot be completed for sgNIPt cfDNA LibAmp Pur to PostLib Quant TM	code_reviewer: null (status=Closed)
LOPS-5319	Story	Verified	Leonid Garin	Update ReTriggerPipe sql query to search for the old and new attribute types for assayRequestDependencies	code_reviewer: null (status=Verified)
LOPS-5283	Defect	Closed	—	Primer Design assay request message is not being processed successfully	code_reviewer: null (status=Closed)
LOPS-5181	Story	Closed	Klead Fusha	Configure NtrWorklistGeneratorTask to differentiate Quant and Post-Quant steps	code_reviewer: null (status=Closed)
LOPS-5108	Story	Closed	Mikhail Makarin	Process post-extraction assay request for ASSAY-00057 (tfmrd-methyl-w-tracer-au-v1)	code_reviewer: null (status=Closed)
LOPS-2649	Story	Closed	—	Test cfDNA Downstream assay rework points	code_reviewer: null (status=Closed)

LOPS Sprint 20250113 (34) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5412	Defect	Verified	Gianna Bell-Eunice	"AM - sgNIPT gDNA Pre-Extraction - 1" Policy node has Sample configuration.	code_reviewer: null (status=Verified)
LOPS-5342	Defect	Closed	—	Wes On X: Capture QC Review: Reject - Error when rerunning pools from Histo & BE	code_reviewer: null (status=Closed)
LOPS-5340	Story	Closed	—	Test only - Inline-QC for Sequencing Steps	code_reviewer: null (status=Closed)
LOPS-5219	Defect	Closed	—	Incorrect Source Array Type for sgNIPT cfDNA LibAmp to PostLib Quant Transfer Method	code_reviewer: null (status=Closed)
LOPS-5062	Defect	Closed	Ize Imai	ExceptionCodeList page not displaying correctly for BloodExtractionSampleResultReview and QCREviewFailedSamples task de	code_reviewer: null (status=Closed)
LOPS-5005	Story	Closed	Vasilii Sevriugin	Trigger LR-PCR pipeline via REST API - Continue 2 (batchId and gene)	code_reviewer: null (status=Closed)
LOPS-4782	Story	Closed	Brad Garrett	Process tissue filler samples for WGS	code_reviewer: null (status=Closed)

sgNIPT Sprint 9 (25) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2653	Story	Closed	Kathy Dao	KD Ticket Design - Sprint 9 (24)	code_reviewer: null (status=Closed)

sgNIPT Sprint 8 (24) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2275	Story	Closed	Kathy Dao	KD Ticket Design work - Sprint 8 (24)	code_reviewer: null (status=Closed)

sgNIPT Sprint 6 (22) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2493	Story	Verified	Laura Dietrick	gDNA Pre-extraction array method	code_reviewer: null (status=Verified)
LOPS-2465	Story	Verified	Monish Grover	gDNA Extraction Quant test method and parameter list	code_reviewer: null (status=Verified)

sgNIPT Sprint 3 (19) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2626	Story	Closed	—	Child gDNA sample template	code_reviewer: null (status=Closed)

sgNIPT Sprint 16 (32) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5043	Defect	Closed	Gianna Bell-Eunice	Plasma Isolation processing fails for Re-run and Manual Isolation Evaluation	code_reviewer: null (status=Closed)

sgNIPT Sprint 15 (31) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-5027	Defect	Closed	—	Unable to promote results for sgNIPT cfDNA Library Prep A-Tailing array method	code_reviewer: null (status=Closed)

sgNIPT Sprint 13 (29) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4161	Defect	Verified	—	Transfer method sgNIPT cfDNA Capture to Pool Quant cannot be performed due to Level Zone naming conflict	code_reviewer: null (status=Verified)

sgNIPT Sprint 12 (28) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4593	Defect	Closed	—	"sgNIPT gDNA Library Prep": Test result for the "No" value is not populating	code_reviewer: null (status=Closed)
LOPS-4227	Story	Verified	—	Create testcases with sgNIPT Assay-00041 Happy Path	code_reviewer: null (status=Verified)

sgNIPT Sprint 11 (27) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4081	Tweak	Verified	Olawale Dada	Updates to Pooling/Hyb (Day 1) array transfer method	code_reviewer: null (status=Verified)

WESonX Sprint 32 (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-4115	Story	Closed	Kevin Detweiler	Capture QC Review: Update 'Plate-Level Pool QC'	code_reviewer: null (status=Closed)

WESonX Sprint 31 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5020	Story	Closed	Kevin Detweiler	WES: Access for Lab Ops User (Test Only)	code_reviewer: null (status=Closed)
LOPS-5019	Story	Closed	Kevin Detweiler	WES: Access for Extraction User (Test Only)	code_reviewer: null (status=Closed)

WESonX Sprint 28 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4713	Defect	Verified	Ron Enson	Wes On X: Capture Quant QC Review - 'Capture QC Review' button triggers 'Capture Quant' action (Internal Defect)	code_reviewer: null (status=Verified)
LOPS-4690	Defect	Closed	Justin Jones	Incorrect sequencer serial number set-up in the production LOPS	code_reviewer: null (status=Closed)
LOPS-4595	Defect	Closed	Kevin Detweiler	[SIG AU WES-X] Exception in LOPS did not generate TNP in LIMS	code_reviewer: null (status=Closed)
LOPS-3968	Story	Closed	Meghana Joshi	Assay QC Review: Exclude SAMPLE from POOL Re-Run starting from Blood Extraction/Histopathology (Test-Only)	code_reviewer: null (status=Closed)

WESonX Sprint 27 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4189	Defect	Verified	Meghana Joshi	Capture QC Review Blocked because page is NOT available on Post-Launch Build (Internal Defect)	code_reviewer: null (status=Verified)
LOPS-4164	Defect	Verified	Kevin Detweiler	Blood Samples sent for re-run from 'Capture QC Review' not included in BE Worklist	code_reviewer: null (status=Verified)

WESonX Sprint 26 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4110	Defect	Verified	Kevin Detweiler	"Not a Valid Instrument" error when user try to select an instrument in WESSequencingRunDetails	code_reviewer: null (status=Verified)
LOPS-3973	Story	Verified	—	Assay QC Review: Maintain SAMPLE in POOL Re-Run starting from Hybrid Capture/Sequencing Prep (Test-Only)	code_reviewer: null (status=Verified)
LOPS-3955	Defect	Verified	Lev Evstratov	Wes On X: Pre-Capture Pooling - Error while processing Pre-Capture Pooling rundata file	code_reviewer: null (status=Verified)
LOPS-3717	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood/Tissue Sample from 'Hybrid Capture' Workflow to 'Sequencing Prep' Workflow (Test-Only)	code_reviewer: null (status=Closed)

WESonX Sprint 25 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3873	Defect	Closed	Kevin Detweiler	Anomalous receive/unreceive/validation behavior in Histology	code_reviewer: null (status=Closed)
LOPS-3854	Defect	Closed	Swati Giri	Save/Release doesn't complete the case	code_reviewer: null (status=Closed)
LOPS-3834	Defect	Verified	Swati Giri	Wes On X - Capture QC Review - WESSequencingRunWorkflow TMs should not be assigned after Capture QC Review	code_reviewer: null (status=Verified)
LOPS-3833	Tweak	Closed	Ron Enson	Wes On X - Capture Quant - Typo in validation message for re-entering concentration should be fixed	code_reviewer: null (status=Closed)
LOPS-3824	Story	Closed	—	WES: Display Received Samples Ready for Tissue Extraction (Test Only)	code_reviewer: null (status=Closed)
LOPS-3716	Story	Closed	Michael Livingston	Assay Cancellation Request: Tissue Sample from 'Tissue Extraction' Workflow to Tissue 'Library Prep' Workflow (Test-Only	code_reviewer: null (status=Closed)
LOPS-3472	Defect	Closed	Meghana Joshi	Wes On X - Capture QC Review - TMs has incorrect statuses after Reject action using new Wes Actions - Capture QC Review	code_reviewer: null (status=Closed)
LOPS-3426	Story	Closed	Kevin Detweiler	Extraction/Library/Capture QC Review: Validate Cannot Re-Quant Plate after QC Review is Completed	code_reviewer: null (status=Closed)
LOPS-1452	Story	Closed	Michael Livingston	Assay Cancellation Request: Blood Sample from 'Blood Extraction' Workflow to 'Library Prep' Workflow (Test-Only)	code_reviewer: null (status=Closed)

WESonX Sprint 24 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3788	Story	Closed	—	Assay QC Review: Sequencing Prep Pool Disposal (Test Only)	code_reviewer: null (status=Closed)
LOPS-3640	Defect	Closed	—	LOPS worklist unable to be utilized by Biomek	code_reviewer: null (status=Closed)
LOPS-3493	Story	Closed	Michael Livingston	Sequencing Prep: Update Transfer Volume Calculation	code_reviewer: null (status=Closed)
LOPS-3271	Defect	Closed	Michael Livingston	Parent instrument is available during selection of sequencer instrument	code_reviewer: null (status=Closed)
LOPS-3111	Story	Closed	Swati Giri	Create Normalization Worklist - Test with Canceled Samples	code_reviewer: null (status=Closed)
LOPS-2646	Story	Closed	Kevin Detweiler	Hybrid Capture Re-Run: Support Filler Samples - Test Only	code_reviewer: null (status=Closed)

WESonX Sprint 23 (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3459	Defect	Closed	Swati Giri	Wes On X - Capture QC Review - ReQuant - An error is displayed for ReQuant with filler samples	code_reviewer: null (status=Closed)
LOPS-3454	Defect	Verified	Mikhail Terpugov	Uploading for Capture PCRCleanup Rundata throws error	code_reviewer: null (status=Verified)
LOPS-3381	Defect	Verified	Meghana Joshi	Wes On X - Capture QC Review - Reject - An error is displayed for completing review after Reject plate	code_reviewer: null (status=Verified)
LOPS-3370	Story	Closed	Meghana Joshi	Blood Extraction Results Review: Support 'Sample Status'	code_reviewer: null (status=Closed)
LOPS-3321	Defect	Closed	Klead Fusha	WES on X: BERR - Fail & re-extract: missing 'samples to confirm list page' in the fail & re-extract workflow	code_reviewer: null (status=Closed)
LOPS-3320	Defect	Closed	Klead Fusha	WES on X: BERR - Log exception & Fail assay: incorrect steps order in the log exception workflow	code_reviewer: null (status=Closed)
LOPS-3251	Tweak	Closed	Kevin Detweiler	Reagent Barcode only visible to administrators	code_reviewer: null (status=Closed)
LOPS-3217	Tweak	Closed	Kevin Detweiler	Histopath - TM Descriptions in the Assay Template Updated to Match the TM Descriptions	code_reviewer: null (status=Closed)
LOPS-3132	Story	Closed	Swati Giri	Histopath - reconcile test method (Workitem Description)	code_reviewer: null (status=Closed)
LOPS-3112	Story	Closed	Swati Giri	Create Pre-Capture Pooling Worklist - Test with Canceled Samples	code_reviewer: null (status=Closed)
LOPS-3035	Story	Closed	Monish Grover	Support Instrument Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	code_reviewer: null (status=Closed)
LOPS-2952	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Samples and controls status doesn't change to "Stored"	code_reviewer: null (status=Closed)
LOPS-1954	Story	Closed	Monish Grover	Support Reagent Barcode Scan and Lookup across All Manual Workflow Steps - Test Only	code_reviewer: null (status=Closed)
LOPS-1474	Story	Closed	Mikhail Makarin	Process Blood Filler Samples	code_reviewer: null (status=Closed)

WESonX Sprint 22 (16 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3273	Defect	Closed	Mikhail Makarin	Plate with blood filler failed after Fragmentation has been performed	code_reviewer: null (status=Closed)
LOPS-3269	Tweak	Closed	—	Missing Sonicators in assorted environments	code_reviewer: null (status=Closed)
LOPS-3180	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Tissue Samples	code_reviewer: null (status=Closed)
LOPS-3165	Tweak	Closed	Kevin Detweiler	Update: Create Blood/Tissue Filler Samples	code_reviewer: null (status=Closed)
LOPS-3074	Story	Verified	Michael Livingston	Capture QC Review: Display Blood/Tissue Filler Samples	code_reviewer: null (status=Verified)
LOPS-3073	Story	Closed	Michael Livingston	Library QC Review: Display Blood/Tissue Filler Samples	code_reviewer: null (status=Closed)
LOPS-3072	Story	Closed	Mikhail Terpugov	Blood Extraction Results Review: Display Filler Samples	code_reviewer: null (status=Closed)
LOPS-2954	Defect	Closed	Klead Fusha	Extraction QC Review - Accept partial: Failed Samples Page doesn't have all necessary columns	code_reviewer: null (status=Closed)
LOPS-2824	Story	Closed	—	Sequencing Prep Re-Run: Support Filler Samples - Test Only	code_reviewer: null (status=Closed)
LOPS-2643	Story	Closed	Klead Fusha	WES: Standardize Group Test Methods	code_reviewer: null (status=Closed)
LOPS-2603	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains required columns	code_reviewer: null (status=Closed)
LOPS-2394	Defect	Closed	—	Capture Quant - Run Details - Rename Reagent name on Consumable Chooser Dialog	code_reviewer: null (status=Closed)
LOPS-1711	Tweak	Closed	Michael Livingston	Array List Page: Update Columns, 'Array Method Description', and 'Array Layout Description'	code_reviewer: null (status=Closed)
LOPS-1475	Story	Closed	Mikhail Makarin	Process Tissue Filler Samples	code_reviewer: null (status=Closed)
LOPS-1472	Story	Closed	Kevin Detweiler	Create Tissue Filler Samples	code_reviewer: null (status=Closed)
LOPS-1456	Story	Closed	Michael Livingston	Extraction QC Review: Display Blood/Tissue Filler Samples	code_reviewer: null (status=Closed)

WESonX Sprint 21 (18 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3238	Defect	Closed	Klead Fusha	Wes On X: BERR - Infinite spinner when logging exceptions	code_reviewer: null (status=Closed)
LOPS-3176	Story	Closed	Klead Fusha	WES: Support Received Samples for Tissue Extraction	code_reviewer: null (status=Closed)
LOPS-3134	Story	Closed	Klead Fusha	WES: Support Received Samples for Blood Extraction	code_reviewer: null (status=Closed)
LOPS-3123	Defect	Closed	Swati Giri	WES on X - 'Basic Search' for Box Barcode on the Rack/Box List Page doesn't work	code_reviewer: null (status=Closed)
LOPS-2900	Story	Closed	Matt Smith	Support Exceptions for Assay QC Review	code_reviewer: null (status=Closed)
LOPS-2893	Story	Closed	Kevin Detweiler	Blood Extraction Worklist: Support Blood Filler Samples	code_reviewer: null (status=Closed)
LOPS-2883	Defect	Closed	Mikhail Makarin	Wes On X: Quant Concentration Calculation - Negative .XY5 values are rounded incorrectly	code_reviewer: null (status=Closed)
LOPS-2856	Story	Closed	Matt Smith	Create Normalization Worklist - Test with Exception Samples	code_reviewer: null (status=Closed)
LOPS-2855	Story	Closed	Matt Smith	Create Pre-Capture Pooling Worklist - Test with Exception Samples	code_reviewer: null (status=Closed)
LOPS-2847	Defect	Closed	—	WES on X: Tissue Extraction QC Review - Log exception action - List of possible exceptions has not applicable options fo	code_reviewer: null (status=Closed)
LOPS-2691	Defect	Closed	Klead Fusha	Wes On X: BERR - Completion of BERR step is not mandatory	code_reviewer: null (status=Closed)
LOPS-2550	Defect	Closed	—	WES on X: BERR - List of possible exceptions has not applicable options for blood	code_reviewer: null (status=Closed)
LOPS-2442	Story	Closed	Matt Smith	Support Tissue Exceptions for Assay Workflow	code_reviewer: null (status=Closed)
LOPS-2441	Story	Closed	—	Support Blood Exceptions for Assay Workflow	code_reviewer: null (status=Closed)
LOPS-1710	Tweak	Closed	Swati Giri	Plate List Page: Order Options in 'Download WES Worklist' and 'Upload WES Rundata'	code_reviewer: null (status=Closed)
LOPS-1471	Story	Closed	Kevin Detweiler	Create Blood Filler Samples	code_reviewer: null (status=Closed)
LOPS-1287	Story	Closed	Klead Fusha	Tissue Extraction 1 > Select Tissue Samples: Add Control 'Reagent' to QC Batch as Required	code_reviewer: null (status=Closed)
LOPS-1224	Story	Closed	Mikhail Terpugov	Sample List Page: Display Columns for Samples	code_reviewer: null (status=Closed)

WESonX Sprint 20 (36 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3179	Story	Closed	Matt Smith	WES: Support 'Sample Receipt' Workflow Step for Blood Samples	code_reviewer: null (status=Closed)
LOPS-3169	Story	Closed	Michael Livingston	WES: Update Tissue Primer Plate Map	code_reviewer: null (status=Closed)
LOPS-3167	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Reject) - Assign incident to Histopathology Department = ATX Histopath COMM	code_reviewer: null (status=Verified)
LOPS-3166	Defect	Verified	Klead Fusha	Wes On X - Library Quant Re-run(Accept Partial) - Incorrect sample id is displayed for new incident after ru-run	code_reviewer: null (status=Verified)
LOPS-3162	Defect	Closed	—	Incorrect sequencing barcodes for Positive Control	code_reviewer: null (status=Closed)
LOPS-3129	Defect	Closed	—	Optional form fields on WesBloodExtractionRunDetails are disabled from taking user input	code_reviewer: null (status=Closed)
LOPS-3126	Defect	Closed	Matt Smith	LOPS can't process accessioning event from bridge	code_reviewer: null (status=Closed)
LOPS-3124	Defect	Closed	Michael Livingston	Missing sequencer(s) configuration during deployment	code_reviewer: null (status=Closed)
LOPS-3109	Defect	Closed	Michael Livingston	Wes On X: Sequencing - Arrays Completed Workflow Step doesn't display SEQ plates	code_reviewer: null (status=Closed)
LOPS-3099	Defect	Closed	Meghana Joshi	Library QC Review -Fail plate Action> Sample status doesn't change to stored and Controls status stays valid	code_reviewer: null (status=Closed)
LOPS-3085	Defect	Closed	—	Capture QC Review: Fail Plate and Re-Run - Samples and controls status doesn't change to "Stored"	code_reviewer: null (status=Closed)
LOPS-3040	Defect	Closed	Swati Giri	Arrays page -> Searching by Arrays id isn't working	code_reviewer: null (status=Closed)
LOPS-2953	Defect	Closed	Klead Fusha	There is an Error when sending NOT failed Blood Library Amplification Plate (WLP2) to Re-Run	code_reviewer: null (status=Closed)
LOPS-2951	Defect	Closed	Mikhail Terpugov	Extraction QC Review: Fail Plate and Re-Run Blood - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow s	code_reviewer: null (status=Closed)
LOPS-2942	Defect	Closed	Klead Fusha	Extraction QC Review: Fail Plate and Re-Run Tissue - Extraction DNA Plate shouldn't proceed to 'Normalization' workflow	code_reviewer: null (status=Closed)
LOPS-2604	Defect	Closed	Michael Livingston	"Select Instrument" table in the Wes Sequencing step doesn't contains correctly filtered DNA Sequencers, "NOVA SEQ X" is	code_reviewer: null (status=Closed)
LOPS-2572	Story	Closed	Brad Garrett	WES: Support Sequencing Prep Re-Run	code_reviewer: null (status=Closed)
LOPS-2571	Story	Closed	Klead Fusha	WES: Support Hybrid Capture Re-Run	code_reviewer: null (status=Closed)
LOPS-2570	Story	Closed	Mikhail Makarin	WES: Support Histopathology Re-Run	code_reviewer: null (status=Closed)
LOPS-2568	Story	Closed	Mikhail Terpugov	WES: Support Blood Extraction Re-Run	code_reviewer: null (status=Closed)
LOPS-2518	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue/Blood Combined POOL Re-Run starting from Sequencing Prep	code_reviewer: null (status=Closed)
LOPS-2517	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Hybrid Capture	code_reviewer: null (status=Closed)
LOPS-2516	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Hybrid Capture	code_reviewer: null (status=Closed)
LOPS-2515	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue POOL Re-Run starting from Histopathology	code_reviewer: null (status=Closed)
LOPS-2514	Story	Closed	Brad Garrett	Assay QC Review: Support Blood POOL Re-Run starting from Blood Extraction	code_reviewer: null (status=Closed)
LOPS-2513	Story	Closed	Brad Garrett	Assay QC Review: Support Tissue SAMPLE Re-Run starting from Histopathology	code_reviewer: null (status=Closed)
LOPS-2510	Defect	Closed	Klead Fusha	Capture QC Review - Library Amplification Plate Barcode should be displayed	code_reviewer: null (status=Closed)
LOPS-2406	Story	Closed	Meghana Joshi	Update Capture QC Review page for Re-Quant	code_reviewer: null (status=Closed)
LOPS-2401	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Tissue	code_reviewer: null (status=Closed)
LOPS-2383	Defect	Closed	Brad Garrett	Wes On X: Tissue Extraction - Separate Tissue button must be used to download Tissue Ext Worklist	code_reviewer: null (status=Closed)
LOPS-2244	Defect	Closed	Klead Fusha	Create Normalization WorklistTissue should be available via Download WES Worklist - Download Normalization Worklist dro	code_reviewer: null (status=Closed)
LOPS-1881	Defect	Closed	Klead Fusha	Wes on X: Lysis And Decrosslinking - Test Method status is Released if samples are marked Completed prior to entering QC	code_reviewer: null (status=Closed)
LOPS-1530	Story	Closed	Brad Garrett	Assay QC Review: Support Blood SAMPLE Re-Run starting from Blood Extraction	code_reviewer: null (status=Closed)
LOPS-1430	Story	Closed	Meghana Joshi	Capture QC Review: Actions > Re-Quant Plate	code_reviewer: null (status=Closed)
LOPS-1283	Story	Closed	Meghana Joshi	Capture Quant > Record New Capture Quant Values	code_reviewer: null (status=Closed)
LOPS-1048	Defect	Closed	Mikhail Makarin	WES Sequencing - Natera Lot # and/or Natera Part # for Flow Cell are not being validated through highlighting	code_reviewer: null (status=Closed)

WESonX Sprint 19 (33 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2843	Story	Closed	Meghana Joshi	WES: Capture QC Review - Task-Based User Flow	code_reviewer: null (status=Closed)
LOPS-2834	Defect	Closed	Mikhail Terpugov	Capture Quant - Replace WESCaptureQCRunDetails with WESCaptureQCRunDataEntered in WesCaptureQuantWorkflow Group TM	code_reviewer: null (status=Closed)
LOPS-2792	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (SELECT ai.itemlabel \| Single value expected instead of 289 rows, Query.ja	code_reviewer: null (status=Closed)
LOPS-2788	Defect	Verified	—	Library QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action (Test only)	code_reviewer: null (status=Verified)
LOPS-2715	Defect	Closed	Meghana Joshi	WES on X: Normalization - Control should be validated for a correct part number	code_reviewer: null (status=Closed)
LOPS-2685	Defect	Closed	Kevin Detweiler	Wes On X: Hybridization Thermal Cycler - Step can't be completed	code_reviewer: null (status=Closed)
LOPS-2683	Defect	Closed	Klead Fusha	Wes On X: Sequencing - Final 'Sequencing Prep' Array Method is not compatible with Seq Man requirements	code_reviewer: null (status=Closed)
LOPS-2660	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - Concentrations are set up only for the first WesExtrQuantResult Dataset	code_reviewer: null (status=Closed)
LOPS-2656	Defect	Closed	Meghana Joshi	Extraction Quant - Re-Upload Quant rundata - QC Review is performed for the first WesExtQuantResult TM and DataSet after	code_reviewer: null (status=Closed)
LOPS-2586	Defect	Closed	Mikhail Terpugov	Capture Quant Run Details - Rename WESCaptureQCRunDataEntered Test Method	code_reviewer: null (status=Closed)
LOPS-2585	Defect	Closed	Meghana Joshi	Capture QC Review - WESCaptureQC Test method isn't completed after QC review	code_reviewer: null (status=Closed)
LOPS-2532	Defect	Verified	—	Wes On X: QC Review - Plate status is not updated to Reviewed after 'Accept Partial' action	code_reviewer: null (status=Verified)
LOPS-2526	Defect	Verified	—	Wes On X - Error Creating Sequencing Manifest (Required String 'reagentlotid' is null or empty)	code_reviewer: null (status=Verified)
LOPS-2502	Defect	Verified	—	Wes on X: Error running Sequencing Prep step (AssignNextGroupTest.java:56)	code_reviewer: null (status=Verified)
LOPS-2461	Defect	Closed	Meghana Joshi	Upload WES Normalization Rundata does not validate reagents	code_reviewer: null (status=Closed)
LOPS-2439	Defect	Verified	—	Wes On X: Capture Quant Run Details - RunDataEntered Param Data Type is incorrect	code_reviewer: null (status=Verified)
LOPS-2420	Defect	Closed	Meghana Joshi	Library Amplification Tissue - Rundata could't be processed with prod-like Reagent header	code_reviewer: null (status=Closed)
LOPS-2399	Story	Closed	Meghana Joshi	Library QC Review: Action > Fail Plate and Re-Run - Blood	code_reviewer: null (status=Closed)
LOPS-2398	Story	Closed	Mikhail Makarin	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	code_reviewer: null (status=Closed)
LOPS-2342	Story	Closed	Mikhail Terpugov	Extraction/Library Quant: Round Calculated Concentration (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-2340	Story	Closed	Mikhail Terpugov	Capture QC: Update Min QC Threshold Symbol (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-2339	Story	Closed	Mikhail Terpugov	Library QC: Update Min QC Threshold Symbol (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-2338	Story	Closed	Mikhail Terpugov	Extraction QC: Update Min QC Threshold Symbol (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-2319	Defect	Verified	—	Download WES Normalization Worklist Tissue - generates file without actual values	code_reviewer: null (status=Verified)
LOPS-2240	Story	Closed	Klead Fusha	Extraction QC Review: Action > Fail Plate and Re-Run - Tissue	code_reviewer: null (status=Closed)
LOPS-2239	Story	Closed	Mikhail Terpugov	Extraction QC Review: Action > Fail Plate and Re-Run - Blood	code_reviewer: null (status=Closed)
LOPS-2214	Story	Closed	Klead Fusha	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Tissue Sample	code_reviewer: null (status=Closed)
LOPS-2202	Story	Closed	Brad Garrett	Library Prep - Create Worklist for Tissue	code_reviewer: null (status=Closed)
LOPS-2132	Defect	Verified	—	Wes on X: Tissue Extraction: Tube to Rack - Control sample can't be scanned since it lacks a barcode	code_reviewer: null (status=Verified)
LOPS-2121	Defect	Verified	—	Extraction QC Review: Natera Accessioning ID isn't shown for parent sample	code_reviewer: null (status=Verified)
LOPS-1870	Story	Closed	Meghana Joshi	Pre-Capture Pooling: Exclude Failed Samples from Worklist > Exclude 'Library QC' Failed Sample	code_reviewer: null (status=Closed)
LOPS-1455	Story	Closed	Michael Livingston	Update Extraction QC Review page for Re-Quant (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-1270	Story	Closed	Mikhail Makarin	Library Quant > Re-Upload Quant Rundata	code_reviewer: null (status=Closed)

WESonX Sprint 18 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2741	Defect	Closed	Brad Garrett	Wes On X: BE Quant - Worklist can't be created	code_reviewer: null (status=Closed)
LOPS-2681	Defect	Closed	Klead Fusha	Wes On X: Sequencing Prep - Step can't be completed with 'Blood pool not found for plate' error	code_reviewer: null (status=Closed)
LOPS-2644	Defect	Closed	Michael Livingston	Wes On X - WesRackToPlate TM and WESTissueDNAExtraction test are absent in WesTissueExtractionWorkflow	code_reviewer: null (status=Closed)
LOPS-2557	Defect	Verified	Klead Fusha	WES on X: BERR - Gentle option for leaving page isn't available	code_reviewer: null (status=Verified)
LOPS-2547	Defect	Verified	—	Wes on X: Sequencing - The way Flow Cell ID data is stored is not compatible with platform requirements for Sequencing M	code_reviewer: null (status=Verified)
LOPS-2546	Defect	Verified	—	Wes on X: Sequencing - The way sequencer data is stored is not compatible with platform requirements for Sequencing Mani	code_reviewer: null (status=Verified)
LOPS-2483	Defect	Closed	Mikhail Terpugov	Wes On X: QC Review - Page doesn't display Array Level values when it's opened	code_reviewer: null (status=Closed)
LOPS-2482	Defect	Verified	Mikhail Terpugov	Wes On X: Blood/Tissue Extraction Quant Results - Calculated Concentration values are not saved on a Sample level	code_reviewer: null (status=Verified)
LOPS-2462	Story	Closed	Michael Livingston	Support Process Type, Sample Number, Sample Type in Library Prep/Amp Worklists	code_reviewer: null (status=Closed)
LOPS-2397	Story	Closed	Mikhail Terpugov	WES on X: Library QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	code_reviewer: null (status=Closed)
LOPS-2370	Defect	Verified	Meghana Joshi	Wes On X: Tissue Library: Quant plate QC Review - Quant plate barcode is not displayed	code_reviewer: null (status=Verified)
LOPS-2345	Defect	Closed	Meghana Joshi	Wes On X: Blood Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	code_reviewer: null (status=Closed)
LOPS-2344	Defect	Closed	Meghana Joshi	Wes On X: Tissue Library Quant Plating - Actual 'QuantITHS : NAT-801409' reagent is not validated in rundata file	code_reviewer: null (status=Closed)
LOPS-2328	Defect	Closed	Klead Fusha	Blood Lib Quant Plate barcode is not Displayed on QC Review Page	code_reviewer: null (status=Closed)
LOPS-2320	Defect	Closed	Meghana Joshi	LV should validate and store trackitems (Standards Reagent) against ExtrQuantPlating file uploaded.	code_reviewer: null (status=Closed)
LOPS-2261	Defect	Verified	Klead Fusha	Wes On X: Tissue Extraction: Quant plate QC Review - Quant plate barcode is not displayed	code_reviewer: null (status=Verified)
LOPS-1863	Defect	Verified	Klead Fusha	Wes On X: BE: Quant plate QC Review - Quant plate barcode is not displayed	code_reviewer: null (status=Verified)
LOPS-1819	Defect	Verified	Kevin Detweiler	Wes On X: Upload Library Prep Rundata - Rundata Processing is failing due to conversion issue	code_reviewer: null (status=Verified)
LOPS-1725	Defect	Verified	—	Wes On X: BE - Destination Well Locations are stored altered (without zeroes)	code_reviewer: null (status=Verified)
LOPS-1425	Story	Closed	Meghana Joshi	Library Amplification - Associate primer plate reagent to plate	code_reviewer: null (status=Closed)
LOPS-1419	Story	Closed	Meghana Joshi	Normalization - Add Control 'Reagent' to Plate	code_reviewer: null (status=Closed)
LOPS-1399	Story	Closed	Meghana Joshi	Extraction Quant - Add Standard as Reagent	code_reviewer: null (status=Closed)
LOPS-1120	Story	Closed	Meghana Joshi	Extraction Quant > Re-Upload Quant Rundata	code_reviewer: null (status=Closed)

WESonX Sprint 17 (14 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2488	Defect	Verified	Klead Fusha	Wes On X: Error when creating worklists	code_reviewer: null (status=Verified)
LOPS-2446	Defect	Closed	Meghana Joshi	Wes on X: Sig WES Extraction Quant - Failed to upload quant plating file	code_reviewer: null (status=Closed)
LOPS-2419	Story	Closed	Mikhail Makarin	Support Process Type and Sample Number across all Worklists	code_reviewer: null (status=Closed)
LOPS-2385	Story	Closed	Kevin Detweiler	WES: Update Blood Controls	code_reviewer: null (status=Closed)
LOPS-2213	Story	Closed	Mikhail Terpugov	WES on X: Extraction QC Review > Approve Plate: Support Re-Run for Failed Blood Sample	code_reviewer: null (status=Closed)
LOPS-2211	Defect	Closed	Meghana Joshi	WES Rack-To-Plate Persist TrackItem	code_reviewer: null (status=Closed)
LOPS-2206	Story	Closed	Michael Livingston	WES on X: Support Primer Plates	code_reviewer: null (status=Closed)
LOPS-1878	Defect	Closed	Swati Giri	Blood Extraction: Remove ‘Instrument’ and ‘Reagent’ Free Text Fields from Manual Run Details	code_reviewer: null (status=Closed)
LOPS-1418	Story	Closed	Brad Garrett	Normalization - Exclude Failed Samples from Worklist > Exclude 'Extraction QC' Failed Sample	code_reviewer: null (status=Closed)
LOPS-1291	Story	Closed	Klead Fusha	Sequencing Prep: Create Sequencing Prep Pool	code_reviewer: null (status=Closed)
LOPS-1290	Story	Closed	Klead Fusha	Sequencing Prep: Create RunDetails master data	code_reviewer: null (status=Closed)
LOPS-1286	Story	Closed	Mikhail Terpugov	Capture QC Review - Create QC Review Page and Actions	code_reviewer: null (status=Closed)
LOPS-1285	Story	Closed	Meghana Joshi	Capture QC - Plate-Level QC Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1276	Story	Closed	Mikhail Makarin	Pre-Capture Pooling - Create Worklist Processor and button	code_reviewer: null (status=Closed)

WESonX Sprint 16 (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2119	Defect	Closed	Michael Livingston	Wes on X: Deparaffinization - Incorrect Control description	code_reviewer: null (status=Closed)
LOPS-2027	Story	Closed	Klead Fusha	Library Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-2026	Story	Closed	Klead Fusha	Library Quant: Rundata - Plating > Store Rundata File as Attachment (Blood)	code_reviewer: null (status=Closed)
LOPS-2025	Story	Closed	Klead Fusha	Extraction Quant: Rundata - Results > Store Rundata File as Attachment (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-1879	Story	Closed	Klead Fusha	Extraction Quant: Results Rundata > Store all Sample/Plate Information (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-1869	Story	Closed	Klead Fusha	Extraction Quant - Create Worklist for Tissue	code_reviewer: null (status=Closed)
LOPS-1758	Story	Closed	Meghana Joshi	Library QC Review - QC Review Page for Tissue Library QUANT Plate	code_reviewer: null (status=Closed)
LOPS-1756	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review Page for Tissue Library SAMPLE Plate	code_reviewer: null (status=Closed)
LOPS-1563	Story	Closed	Mikhail Makarin	Library QC - Create Plate-Level Tissue Quant QC Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1562	Story	Closed	Mikhail Makarin	Library QC - Create Tissue Sample / Control Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1458	Story	Closed	Meghana Joshi	Tissue Extraction 9 > Tissue Re-Rack - Unload Tissue Samples	code_reviewer: null (status=Closed)
LOPS-1284	Story	Closed	Meghana Joshi	Capture QC - Sample-Level QC Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1282	Story	Closed	Klead Fusha	Capture Quant - Create array method and record results	code_reviewer: null (status=Closed)
LOPS-1277	Story	Closed	Meghana Joshi	Pre-Capture Pooling - Create Rundata Processor and Update existing Master Data	code_reviewer: null (status=Closed)
LOPS-1182	Story	Closed	Swati Giri	Create a Query for the Array page to select Blood/Tissue Plates for Pre-Capture Pooling	code_reviewer: null (status=Closed)

WESonX Sprint 15 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2157	Defect	Closed	Meghana Joshi	Wes on X: Tissue Extraction: Tube to Rack - QC method name doesn't reflect the step name	code_reviewer: null (status=Closed)
LOPS-2024	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Store Rundata File as Attachment	code_reviewer: null (status=Closed)
LOPS-2023	Story	Closed	Mikhail Terpugov	Normalization - Store Rundata File as Attachment (Blood, Tissue)	code_reviewer: null (status=Closed)
LOPS-1844	Defect	Closed	Klead Fusha	Сontrol information stored at the plate-level during QC review for Norm plate	code_reviewer: null (status=Closed)
LOPS-1744	Story	Closed	Michael Livingston	Fragmentation - Record Run Details for Tissue	code_reviewer: null (status=Closed)
LOPS-1743	Story	Closed	Klead Fusha	Extraction QC Review - QC Review Page for Tissue Extraction QUANT Plate	code_reviewer: null (status=Closed)
LOPS-1635	Story	Closed	Mikhail Terpugov	Library QC Review - QC Review page for Library QUANT Plate	code_reviewer: null (status=Closed)

WESonX Sprint - E2E (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-2716	Defect	Closed	Brandon Culver	Wes On X - Error Creating Sequencing Manifest (Single value expected instead of 256 rows, Query.java:226)	code_reviewer: null (status=Closed)

WESonX - Post Launch (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2140	Defect	Closed	—	Wes on X: Tissue Extraction: Tube to Rack - Tissue Control Barcode is not fully visible for user to review	code_reviewer: null (status=Closed)
LOPS-1523	Defect	Closed	Meghana Joshi	Wes On X: BERR - Error Descriptions are hard to read	code_reviewer: null (status=Closed)

WESonX - Launch (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3105	Defect	Closed	—	Capture QC Review - Re-Quant - Add E-sign for Re-Quant action	code_reviewer: null (status=Closed)
LOPS-1906	Defect	Closed	—	QC Batch Sample Type should be required in QC Method	code_reviewer: null (status=Closed)
LOPS-1754	Defect	Closed	—	Wes On X: Tissue DNA Extraction: Run Details - Instrument and Reagent labels don't match requirements	code_reviewer: null (status=Closed)

Oncology 15-2024 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-6927	Defect	Closed	Michael Livingston	The cfDNA Pool Dilution Worklist Generation failed in re run cfDNA Pool Sequencing Process	code_reviewer: null (status=Closed)
LOPS-6884	Story	Closed	Michael Livingston	Spike: Investigate issue with multiple genes for Assay 44	code_reviewer: null (status=Closed)
LOPS-6645	Defect	Verified	Brandon Culver	SgniptAlgPipelineRequest fails when both HBA1 and HBA2 genes are listed in assay attributes	code_reviewer: null (status=Verified)

MiSeq Workflows (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9446	Story	SQA Blocked	Swati Giri	Add Miseq to Post Amp Side Bar Menu	code_reviewer: null (status=SQA Blocked)

LOPS WES/WGS 20260223 (63) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-10053	Story	Code Review	Swati Giri	UI Updates to QC Batch Maintenance Page	code_reviewer: null (status=Code Review)
LOPS-9862	Story	Code Review	Swati Giri	MiSeq Pooling Download Worklist	code_reviewer: null (status=Code Review)

LOPS WES/WGS 20260209 (62) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9893	Defect	Closed	—	Re-quant QPCR -> Plate is moved to Historical	code_reviewer: null (status=Closed)

LOPS WES/WGS 20251103 (55) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-9063	Defect	Verified	Monish Grover	PreAmp and PostAmp gizmo menus missing in the 1.4.0.2 release candidate	code_reviewer: null (status=Verified)

LOPS WES/WGS 20251020 (54) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8669	Story	Closed	—	Extend WGS DAQ Assay QC Review to support merged BAM results	code_reviewer: null (status=Closed)

LOPS WES/WGS 20251006 (53) (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8815	Story	Closed	Ize Imai	Enable BAM merge support for WGS tissue samples	code_reviewer: null (status=Closed)

LOPS WES/WGS 20250908 (51) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8394	Story	Verified	Monish Grover	Sequencing: Updates to Menu and Sidebar	code_reviewer: null (status=Verified)
LOPS-8210	Story	Verified	Dennis Lin	Sequencing: WGS New Sequencing Prep Run Details Task	code_reviewer: null (status=Verified)
LOPS-8163	Story	Verified	Kevin Detweiler	Sequencing: WGS Sequencing	code_reviewer: null (status=Verified)

LOPS WES/WGS 20250825 (50) (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-8378	Defect	Verified	—	Button name "Hybrid Capture Run Details"	code_reviewer: null (status=Verified)
LOPS-8306	Defect	Closed	—	Library Prep- Fragmentation step does not provide page for inputting instruments	code_reviewer: null (status=Closed)
LOPS-8205	Defect	Closed	—	Filler gDNA samples are not displayed on 'WES/WGS Blood Extraction Samples' page	code_reviewer: null (status=Closed)
LOPS-8090	Story	Verified	Swati Giri	Create Sequencing Sidebar for GUIDE Project	code_reviewer: null (status=Verified)
LOPS-7967	Defect	Verified	Monish Grover	Library Prep & QC: Update Extraction Quant Count to only include TDNA Plates	code_reviewer: null (status=Verified)

LOPS WES/WGS 20250811 (49) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7936	Defect	Verified	Monish Grover	Extraction: Ensure that counter matches # of samples in Extraction Sample queue	code_reviewer: null (status=Verified)
LOPS-7871	Story	Verified	Swati Giri	Histology: Candidate for rework data entry location for external cases	code_reviewer: null (status=Verified)

LOPS WES/WGS 20250728 (48) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-7880	Defect	Verified	—	Wrong 'Histo Sample Receipt' page name	code_reviewer: null (status=Verified)
LOPS-7864	Defect	Closed	—	Fail & Re-Extract sample issue	code_reviewer: null (status=Closed)
LOPS-7482	Story	Closed	—	Histology: WGS Tissue Return Page	code_reviewer: null (status=Closed)
LOPS-7455	Story	Closed	Swati Giri	Histology: WGS Accessioning Page	code_reviewer: null (status=Closed)
LOPS-2449	Story	Closed	—	Re-batching implementation	code_reviewer: null (status=Closed)
LOPS-2284	Story	Closed	—	Re-batching for normalization	code_reviewer: null (status=Closed)

LOPS Production Support Issues (1 ticket)

Key	Type	Status	Developer	Summary	Details
LOPS-8445	Defect	Closed	—	Prevent WES/WGS Primer Designs from being created if their associated Blood or Tissue Assay have a failed disposition	code_reviewer: null (status=Closed)

LOPS WH 20260223 (63) (M17) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9921	Defect	Closed	Michael Livingston	Control Swap process shouldn't swap controls from plates when they are still in progress	code_reviewer: null (status=Closed)
LOPS-9792	Story	Verified	Michael Livingston	Support Gene Retesting in Worklist and RunLog Processing	code_reviewer: null (status=Verified)
LOPS-8804	Tweak	Code Review	Brandon Culver	Breakdown of samples run through sequencing per gene.	code_reviewer: null (status=Code Review)
LOPS-8339	Story	Ready for SQA	Mehmet Ali Eken	Implement dirty data resolving mechanism when getting sample data from LIMS	code_reviewer: null (status=Ready for SQA)
LOPS-8338	Story	Ready for SQA	Mehmet Ali Eken	Send notification to LIMS when sample is disposed/biobanked in LOPS	code_reviewer: null (status=Ready for SQA)
LOPS-8337	Story	Ready for SQA	Mehmet Ali Eken	Implement authentication logic to connect to LIMS API	code_reviewer: null (status=Ready for SQA)
LOPS-8336	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge sample disposal message processing	code_reviewer: null (status=Ready for SQA)
LOPS-8335	Story	Ready for SQA	Mehmet Ali Eken	Implement Bridge assay request message processing	code_reviewer: null (status=Ready for SQA)

GHPv2 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-9545	Story	Closed	—	Save all Pipeline output links to appropriate assay attributes	code_reviewer: null (status=Closed)
LOPS-9544	Story	Closed	—	Assay Disposition updates automatically	code_reviewer: null (status=Closed)
LOPS-9543	Story	Closed	—	Assay Instance Status is updated appropriately	code_reviewer: null (status=Closed)
LOPS-9539	Story	Closed	—	DAQ Pipeline to LOPS- Receive and Ingest Pipeline Outputs from S3 in message	code_reviewer: null (status=Closed)

G64onLOPS Sprint 9 (24) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3664	Story	Closed	Brad Garrett	Finish Normalization - Tissue	code_reviewer: null (status=Closed)
LOPS-3277	Defect	Closed	Brad Garrett	WGS section in the Array List page contains various inconsistencies and misplaced buttons	code_reviewer: null (status=Closed)
LOPS-3232	Defect	Closed	Ron Enson	Parameter value of Unknown samples not populated when viewed	code_reviewer: null (status=Closed)
LOPS-2927	Story	Closed	Brad Garrett	Start Normalization - Tissue	code_reviewer: null (status=Closed)
LOPS-1944	Story	Closed	Klead Fusha	Start qPCR Plate Setup	code_reviewer: null (status=Closed)
LOPS-1943	Story	Closed	Gianna Bell-Eunice	Finish Library Amp	code_reviewer: null (status=Closed)

G64onLOPS Sprint 8 (23) (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3449	Story	Closed	Hani Yakan	Modify WGS Group TM to remove child sample plan details	code_reviewer: null (status=Closed)
LOPS-3411	Defect	Closed	Brad Garrett	QC Batch Data Entry throws an error	code_reviewer: null (status=Closed)
LOPS-3077	Story	Closed	—	Validate controls for WGS Normalization - Test Only	code_reviewer: null (status=Closed)

G64onLOPS Sprint 4 (19) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2201	Story	Closed	Gianna Bell-Eunice	Page to review WGS blood extraction results	code_reviewer: null (status=Closed)
LOPS-1939	Story	Closed	Gianna Bell-Eunice	Perform Fragmentation	code_reviewer: null (status=Closed)

G64onLOPS Sprint 17 (32) (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5170	Story	Closed	—	WES/WGS: Access for Pathologist User (Test Only)	code_reviewer: null (status=Closed)
LOPS-5168	Defect	Closed	Klead Fusha	Box list page is missing the WGS actions	code_reviewer: null (status=Closed)
LOPS-5161	Story	Closed	—	WES/WGS: Access for Histology User (Test Only)	code_reviewer: null (status=Closed)
LOPS-5136	Defect	Closed	Brad Garrett	Wes On X: Capture QC - Error when sending blood and tissue sample pools to rerun from BE/Histo	code_reviewer: null (status=Closed)
LOPS-5135	Defect	Closed	Brad Garrett	Runlog header details are not being recorded for some WGS steps	code_reviewer: null (status=Closed)
LOPS-4158	Tweak	Closed	Michael Livingston	Standardize G64 test methods, array methods, and array layouts	code_reviewer: null (status=Closed)

G64onLOPS Sprint 16 (31) (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5149	Defect	Closed	Michael Livingston	Fix description for qPCR array layout	code_reviewer: null (status=Closed)
LOPS-5117	Tweak	Closed	—	WGS: Access for Lab Ops User (Test Only)	code_reviewer: null (status=Closed)
LOPS-5116	Story	Closed	—	WGS: Access for Extraction User (Test Only)	code_reviewer: null (status=Closed)
LOPS-5112	Defect	Closed	Klead Fusha	Assay QC page - Complete Review, Array Genealogy, approval/rejection buttons are missing	code_reviewer: null (status=Closed)
LOPS-5095	Defect	Closed	Michael Livingston	Demo/UAT Support: G64 QC Batch status is dataentered	code_reviewer: null (status=Closed)
LOPS-5094	Defect	Closed	—	12/11/2024 issues in PSPC testing	code_reviewer: null (status=Closed)
LOPS-5093	Defect	Closed	Klead Fusha	Unable to create Sequencing Manifest	code_reviewer: null (status=Closed)
LOPS-5034	Defect	Closed	Klead Fusha	WGS Primer design array should be created with the blood and tissue samples loaded	code_reviewer: null (status=Closed)
LOPS-2281	Story	Closed	—	WGS Assay Cancellation - Test only	code_reviewer: null (status=Closed)
LOPS-1970	Story	Closed	—	Rework from Assay QC	code_reviewer: null (status=Closed)
LOPS-1969	Story	Closed	—	(Test only) Support Exception from Assay QC Review	code_reviewer: null (status=Closed)
LOPS-1967	Story	Closed	—	Retrigger WGS pipeline - Test only	code_reviewer: null (status=Closed)

G64onLOPS Sprint 15 (30) (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4948	Defect	Closed	—	The DestConcentration value has fewer digits after uploading rundata file	code_reviewer: null (status=Closed)
LOPS-4931	Defect	Closed	Harris Shapiro	WES E2E workflow can not be completed on g64integration-01 environment	code_reviewer: null (status=Closed)
LOPS-4908	Defect	Closed	Brad Garrett	LOPS doesn't display metric results in Assay QC page if pipe.info.event contains metrics	code_reviewer: null (status=Closed)
LOPS-4899	Defect	Closed	Brad Garrett	LOPS marks the assay as 'Completed' with disposition = 'passed' instead of 'Failed' if the pipe info event contains DAQ	code_reviewer: null (status=Closed)
LOPS-4882	Story	Closed	—	Test Only - Promote Results to Source Array	code_reviewer: null (status=Closed)
LOPS-4862	Defect	Closed	Default User	Box with empty barcode is not displayed in the box list	code_reviewer: null (status=Closed)
LOPS-4847	Defect	Closed	Brad Garrett	LOPS doesn't consume pipe status event if DAQ /PD job is completed	code_reviewer: null (status=Closed)
LOPS-4845	Defect	Closed	Klead Fusha	"Failed to process action 'ProcessResultAction'. Reason: Could not find load array config with name WGS qPCR Results in	code_reviewer: null (status=Closed)
LOPS-1965	Story	Closed	Brad Garrett	Test Only - Automatically launch Primer Design pipeline when assay request is received	code_reviewer: null (status=Closed)

G64onLOPS Sprint 14 (29) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4788	Story	Closed	—	Test Only - WGS tissue must have PRO0022275 instead of PRO0014905	code_reviewer: null (status=Closed)
LOPS-4738	Defect	Closed	Michael Livingston	Test Only: Re-queued blood samples must be included in the WGS blood extraction worklist	code_reviewer: null (status=Closed)
LOPS-4711	Story	Closed	Klead Fusha	The system shall prevent boxes with duplicate barcodes from being created.	code_reviewer: null (status=Closed)
LOPS-4698	Defect	Closed	Brad Garrett	LOPS doesn't automatically generate a kafka event to trigger the PD pipeline in AWS if the DAQ pipelines are completed.	code_reviewer: null (status=Closed)

G64onLOPS Sprint 13 (28) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4625	Defect	Closed	Klead Fusha	Select Tissue Samples missing default values	code_reviewer: null (status=Closed)
LOPS-1953	Story	Closed	Klead Fusha	Finish Sequencing	code_reviewer: null (status=Closed)

G64onLOPS Sprint 12 (27) (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4587	Defect	Closed	Klead Fusha	HIstopathology. Pool samples error	code_reviewer: null (status=Closed)
LOPS-3906	Story	Closed	—	qPCR Results Review	code_reviewer: null (status=Closed)
LOPS-3855	Story	Closed	Michael Livingston	Blood Extraction QC Results Review: Action > Fail & Re-Extract	code_reviewer: null (status=Closed)
LOPS-3683	Story	Closed	—	Start qPCR Plate Setup - Blood, Test only	code_reviewer: null (status=Closed)

G64onLOPS Sprint 11 (26) (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3934	Defect	Verified	Gianna Bell-Eunice	Blood Fragmentation error: required workItem 'WGS Fragmentation' version '1' available and applied	code_reviewer: null (status=Verified)
LOPS-3890	Story	Closed	Michael Livingston	Validate: Cannot Re-Quant Plate after Extraction QC Review is Completed	code_reviewer: null (status=Closed)
LOPS-3878	Defect	Closed	Michael Livingston	Active Array Method Description missing for WGS Tissue Tapestation v1	code_reviewer: null (status=Closed)
LOPS-3867	Defect	Verified	Michael Livingston	Wrong order in Upload WGS Rundata dropdown	code_reviewer: null (status=Verified)
LOPS-3734	Story	Closed	Michael Livingston	Extraction QC Review > Approve Plate: "Accept Partial" and Log Exception for Failed Tissue Sample	code_reviewer: null (status=Closed)
LOPS-3653	Story	Closed	—	Re-verification of the Blood Extraction workflow - Test-Only	code_reviewer: null (status=Closed)
LOPS-3614	Story	Closed	Michael Livingston	Tissue Extraction QC Results Review: Action > Fail & Re-Extract	code_reviewer: null (status=Closed)
LOPS-2522	Story	Closed	Mikhail Terpugov	Process Tapestation file for Library Quant	code_reviewer: null (status=Closed)

G64onLOPS Sprint 10 (25) (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3827	Defect	Closed	Mikhail Terpugov	AssayStatus and Disposition are inaccurate	code_reviewer: null (status=Closed)
LOPS-3654	Story	Closed	—	Re-verification of the Pre-Amp workflow - Test-Only	code_reviewer: null (status=Closed)

LOPS Sprint 20241230 (33) (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5324	Defect	Closed	Klead Fusha	Problems with an extraction re-quant button	code_reviewer: null (status=Closed)
LOPS-5207	Tweak	Verified	Lev Evstratov	Update Assay Templates to set "Template Type" as a mandatory field	code_reviewer: null (status=Verified)
LOPS-5164	Defect	Closed	Lev Evstratov	Transaction Type form is crashed	code_reviewer: null (status=Closed)
LOPS-5072	Story	Closed	Kevin Detweiler	WES: 'Lab Ops' User Access to QC Report (Test Only)	code_reviewer: null (status=Closed)
LOPS-4668	Defect	Verified	Swati Giri	Wes On X: Capture QC Review: Reject - QC Pass Pool samples have WESSequencingPrepWorkflow TM assigned	code_reviewer: null (status=Verified)
LOPS-4612	Story	Closed	—	gDNA extraction quantification worklist generation	code_reviewer: null (status=Closed)
LOPS-4174	Story	Verified	Vadim Gusev	Implement integration module with PIPE API Server	code_reviewer: null (status=Verified)

LOPS Sprint 32 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5178	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2, v3)	code_reviewer: null (status=Closed)
LOPS-5172	Story	Closed	Vasilii Sevriugin	Deduplication of Sequencing Run Complete Kafka messages (more than one topic: v1, v2)	code_reviewer: null (status=Closed)
LOPS-5081	Defect	Closed	—	Assay QC Failing	code_reviewer: null (status=Closed)
LOPS-4981	Defect	Closed	Meghana Joshi	Exceptions and Incidents Elements on the Assay view page are hidden from Lab Ops Operator job type	code_reviewer: null (status=Closed)
LOPS-4702	Story	Verified	Vasilii Sevriugin	Trigger Hybrid Capture pipeline via REST API - Continue	code_reviewer: null (status=Verified)
LOPS-3558	Story	Closed	Valeria Vargas	Create new Reflex Assay Request Handler for post-extraction assays where the sample that requires testing is not yet in	code_reviewer: null (status=Closed)

LOPS Sprint 31 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-5031	Defect	Closed	Ize Imai	Sample - Manage - View/Edit Sample - Data Sets - "QC Batch ID" column should be sorted from most recent (top) to oldest	code_reviewer: null (status=Closed)
LOPS-4992	Defect	Closed	Lev Evstratov	Primer design sequencing manifest is not generated	code_reviewer: null (status=Closed)

LOPS Sprint 29 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4976	Defect	Closed	Lev Evstratov	"QC Batches" tab is not present at "Edit Sample" page	code_reviewer: null (status=Closed)
LOPS-4725	Defect	Closed	Vasiliy Kumaev	Button "Rework Blood from Extraction" produces error: "An unexpected error occurred Caused by Failed to process action '	code_reviewer: null (status=Closed)
LOPS-4596	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Error trying to push samples and fillers in the Deparaffinization step	code_reviewer: null (status=Closed)
LOPS-4583	Defect	Closed	Meghana Joshi	[SIG AU WES-X] Lib Quant QC Assay for Pre-Shakedown Plate (101924B-WLP2) was "Reviewed" without E-sign	code_reviewer: null (status=Closed)
LOPS-4578	Story	Closed	Kevin Detweiler	Additional Role configuration on the Consumables related pages	code_reviewer: null (status=Closed)
LOPS-4571	Story	Closed	Kevin Detweiler	Role Configuration for Request related pages	code_reviewer: null (status=Closed)
LOPS-4569	Story	Verified	Lev Evstratov	Remove OOB field 'quantity' that is no longer in use on workitemchildsampleplan element on the test method maint page	code_reviewer: null (status=Verified)
LOPS-4194	Story	Closed	Kevin Detweiler	Additional Role configuration on AQC Batches related pages	code_reviewer: null (status=Closed)
LOPS-4100	Story	Verified	Vasiliy Kumaev	Provide Natera barcode on Load Array page and update scan to allow Natera Barcode	code_reviewer: null (status=Verified)
LOPS-3907	Defect	Verified	Ize Imai	The values under Exception block under events.labops.workflow.status.v1 are not correct.	code_reviewer: null (status=Verified)
LOPS-3874	Story	Verified	Lev Evstratov	Update QCBatchItemLookup to have ability to scan and display Natera barcodes	code_reviewer: null (status=Verified)
LOPS-3762	Story	Verified	Lev Evstratov	ARM transaction is Not Processed if If the Exception block contains an Exception Code that is not configured in LOPS	code_reviewer: null (status=Verified)
LOPS-1983	Story	Closed	Kevin Detweiler	Read Only Job Type	code_reviewer: null (status=Closed)

LOPS Sprint 28 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4752	Defect	Closed	—	2 Pipe Job ID and 2 Pipe Job Status records created after Pipeline Info message is received and processed successfully	code_reviewer: null (status=Closed)
LOPS-4576	Tweak	Closed	Alex Pakhunov	Missing/inaccessible "Close Incident" button	code_reviewer: null (status=Closed)
LOPS-4559	Defect	Closed	Vladimir Piyanov	Primer Design ARM request was not processed with error	code_reviewer: null (status=Closed)
LOPS-4555	Defect	Closed	—	SEQ Manifest failing with ARJUNA016053 error	code_reviewer: null (status=Closed)
LOPS-4541	Defect	Closed	Kevin Detweiler	WES-X During Child Sample creation, page would get stuck while it saved	code_reviewer: null (status=Closed)
LOPS-4192	Story	Closed	Kevin Detweiler	Additional Role configuration on samples pages	code_reviewer: null (status=Closed)
LOPS-4191	Story	Closed	Kevin Detweiler	Create additional Roles	code_reviewer: null (status=Closed)
LOPS-3950	Story	Closed	Lev Evstratov	Support Assay Request Messages with ERROR or CANCEL action codes	code_reviewer: null (status=Closed)
LOPS-3790	Defect	Closed	Leonid Garin	Primer Design ARM request v1.18 is not processed successfully	code_reviewer: null (status=Closed)
LOPS-2242	Story	Closed	Kevin Detweiler	Update the LIMS Menu for Read-Only Jobtype	code_reviewer: null (status=Closed)

LOPS Sprint 30 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4709	Story	Verified	Vadim Gusev	Implement request conversion logic for Algs requests	code_reviewer: null (status=Verified)
LOPS-4592	Defect	Closed	Meghana Joshi	Assay QC - "Number of Samples" value includes filler samples	code_reviewer: null (status=Closed)
LOPS-3081	Defect	Closed	Meghana Joshi	Passed Blood Samples are Allowed to be sent for Rework, missing validation.	code_reviewer: null (status=Closed)

LOPS Sprint 27 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4107	Story	Verified	Hani Yakan	Create LV1.0 users that are not going to exist in LOPS as users in LOPS with a de-activated status.	code_reviewer: null (status=Verified)
LOPS-4017	Story	Closed	Ron Enson	Add u_commonname back to the instrument sdc	code_reviewer: null (status=Closed)
LOPS-1329	Story	Closed	Mai Ton-Nu	Review reagents data in LV1.0 / LOPS after sync is enabled	code_reviewer: null (status=Closed)
LOPS-961	Story	Closed	Meghana Joshi	Historical Reviews	code_reviewer: null (status=Closed)

LOPS Sprint 26 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-4009	Tweak	Closed	Alex Pakhunov	Reagent Sync: initial sync from LV1.0 to LOPS should only sync active reagents	code_reviewer: null (status=Closed)
LOPS-3903	Story	Closed	Vladimir Piyanov	Update SamRep message processing to Measurement object optional	code_reviewer: null (status=Closed)
LOPS-3883	Defect	Closed	Vladimir Piyanov	Messages under events.labops.workflow.status.v1 topic are not generated for sgNIPT e2e short TNP scenario.	code_reviewer: null (status=Closed)
LOPS-3625	Defect	Closed	Alex Pakhunov	Reagent-Sync connector is failing: ORA-01281: SCN range specified is invalid	code_reviewer: null (status=Closed)
LOPS-3568	Story	Closed	Alex Pakhunov	Data Mesh - Array Package	code_reviewer: null (status=Closed)
LOPS-3261	Story	Closed	Alex Pakhunov	Create a python script for creating and delivering files to aws s3 bucket	code_reviewer: null (status=Closed)
LOPS-1493	Story	Closed	Alex Pakhunov	Instrument Sync to LV1.0	code_reviewer: null (status=Closed)

LOPS Sprint 24 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3844	Story	Closed	Alex Pakhunov	Additional Instrument fields synchronization LOPS to LV 1.0	code_reviewer: null (status=Closed)
LOPS-3663	Tweak	Closed	Vladimir Piyanov	Error not thrown when missing accessioningSourceSystem, accessionedBy, barcode or kitBarcode fields in samrep	code_reviewer: null (status=Closed)
LOPS-3647	Defect	Closed	Lev Evstratov	Flaky: pipeline info message is not consumed due to a processing error	code_reviewer: null (status=Closed)
LOPS-3629	Defect	Closed	Mai Ton-Nu	Instruments Page - "SDITag failed to retrieve data!"	code_reviewer: null (status=Closed)
LOPS-3541	Defect	Closed	Meghana Joshi	WES on X: Impossible to upload Ext Quant Rundata Plating file for the array, which has Cancelled sample	code_reviewer: null (status=Closed)
LOPS-3514	Story	Closed	Valeria Vargas	New button for the LOPS Reagent Qualification Report on both the Active Lots and the Lots Pending Approval list pages.	code_reviewer: null (status=Closed)
LOPS-3477	Tweak	Closed	Mai Ton-Nu	Create a method for assigning quality sample test methods to consumables	code_reviewer: null (status=Closed)
LOPS-3250	Defect	Closed	Mikhail Makarin	Duplicate sample IDs being shown after extraction quant	code_reviewer: null (status=Closed)
LOPS-1003	Tweak	Closed	Ron Enson	Update SQL Used in "By Array Method" LV Query	code_reviewer: null (status=Closed)

LOPS Sprint 25 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3536	Defect	Closed	Gianna Bell-Eunice	Сonverting units of measurement issue in the reagents Master Data.	code_reviewer: null (status=Closed)
LOPS-3476	Tweak	Closed	—	Create a method for assigning approval type to all consumables	code_reviewer: null (status=Closed)
LOPS-2531	Story	Verified	Alex Pakhunov	Data Mesh - Implement Assay Information Package. Test only	code_reviewer: null (status=Verified)
LOPS-1368	Tweak	Closed	—	Create a method for migrating Reagents lot data from LV1.0 to LOPS	code_reviewer: null (status=Closed)

LOPS Sprint 23 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3492	Defect	Closed	Matt Smith	Missing post-pipeline Kafka messages	code_reviewer: null (status=Closed)
LOPS-3403	Tweak	Verified	Ize Imai	Add exception codes that will be received in the Short TNP messages	code_reviewer: null (status=Verified)
LOPS-3364	Story	Closed	Mikhail Makarin	Give users access to buttons/pages that support change of custody for samples	code_reviewer: null (status=Closed)
LOPS-3221	Story	Closed	Vladimir Piyanov	Decrypt sample and kit barcodes received from SamRep	code_reviewer: null (status=Closed)
LOPS-1367	Tweak	Closed	Brandon Culver	Create a method for migrating Reagent type data from LV1.0 to LOPS	code_reviewer: null (status=Closed)

LOPS Sprint 22 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3235	Story	Closed	Ize Imai	Update ARM message processing to set correct site and security department on samples	code_reviewer: null (status=Closed)
LOPS-3205	Defect	Closed	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	code_reviewer: null (status=Closed)
LOPS-1982	Story	Closed	Kersha Eddy	Reagent CLS Job type	code_reviewer: null (status=Closed)

LOPS Sprint 20 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3172	Defect	Verified	Lev Evstratov	Workitem status "Initial" does not change if assay was cancelled	code_reviewer: null (status=Verified)
LOPS-3106	Tweak	Closed	Leonid Garin	Fix Calculation Rule on Pathologist Review	code_reviewer: null (status=Closed)
LOPS-3044	Defect	Closed	Valeria Vargas	WES on X must fix for e2e: Assay QC Control Analysis Review page comes up empty	code_reviewer: null (status=Closed)
LOPS-2978	Story	Closed	Lev Evstratov	The error message when apply "Fail Assay" for assay with InProgress status in Sample Analysis Review page	code_reviewer: null (status=Closed)
LOPS-2928	Defect	Verified	Monish Grover	Controls are not displayed in Wes DAQ Assay QC	code_reviewer: null (status=Verified)
LOPS-2846	Defect	Closed	Lev Evstratov	QNT1 plate samples list contains double instances of samples and the second instance is unavailable	code_reviewer: null (status=Closed)
LOPS-2457	Story	Closed	Ize Imai	Refactor "Use Retain Sample" functionality	code_reviewer: null (status=Closed)
LOPS-1000	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot trackitem data from LOPS to LV1.0	code_reviewer: null (status=Closed)

LOPS Sprint 21 (9 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-3122	Story	Closed	Lev Evstratov	Update policy controlling Reagent Container barcodes to remove kit	code_reviewer: null (status=Closed)
LOPS-3094	Tweak	Closed	Valeria Vargas	Update the events.accessioning.sample.info.v1 topic for additional properties for Bridge	code_reviewer: null (status=Closed)
LOPS-3066	Tweak	Verified	—	Commit Reagent array method to repository	code_reviewer: null (status=Verified)
LOPS-2920	Tweak	Closed	Vasiliy Kumaev	Test Only: Rework Incident Template	code_reviewer: null (status=Closed)
LOPS-2381	Story	Closed	Brandon Culver	Display Reagent Container barcodes	code_reviewer: null (status=Closed)
LOPS-2363	Tweak	Closed	Lev Evstratov	E-Signature Capture During Dataset Approval/Rejection for Controls in Assay QC	code_reviewer: null (status=Closed)
LOPS-999	Story	Closed	Alex Pakhunov	Implement the ability to sync incident id from LOPS to LV1.0	code_reviewer: null (status=Closed)
LOPS-998	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent lot data from LOPS to LV1.0 and LV1.0 to LOPS	code_reviewer: null (status=Closed)
LOPS-728	Story	Closed	Alex Pakhunov	Reagent lot Container Trackitem Sync	code_reviewer: null (status=Closed)

LOPS Sprint 19 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2758	Story	Closed	Vasiliy Kumaev	Support Tissue Rework from Histopathology in Assay QC	code_reviewer: null (status=Closed)
LOPS-2478	Defect	Verified	Lev Evstratov	Flaky: Automatic QC completed status message for pipe results with passed metrics is not sent for an assay	code_reviewer: null (status=Verified)
LOPS-997	Story	Closed	Alex Pakhunov	Implement the ability to sync custom reagent type data from LOPS to LV1.0	code_reviewer: null (status=Closed)

LOPS Sprint 18 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2717	Defect	Verified	Brandon Culver	Fix query for source plates in the Sequence Manifest (Single Batch)	code_reviewer: null (status=Verified)
LOPS-2639	Defect	Closed	Brandon Culver	Failed to process action class 'com.natera.labworkflows.kafka.actions.CreateSequenceManifest: Single row expected instea	code_reviewer: null (status=Closed)
LOPS-2477	Story	Closed	Lev Evstratov	Support "Pipeline Analysis Only" Assay Templates that may not have Test Methods added	code_reviewer: null (status=Closed)
LOPS-2235	Story	Closed	—	The system shall have the ability to update to the Assay, Sample and trackitem information when receiving an ARM message	code_reviewer: null (status=Closed)

LOPS Sprint 16 (3 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2285	Defect	Closed	Brandon Culver	Pipe results processing fails: Assays not found for armguids	code_reviewer: null (status=Closed)
LOPS-2153	Story	Closed	Lev Evstratov	Update Assay QC UI to show counts of number of assays pending disposition	code_reviewer: null (status=Closed)
LOPS-2012	Story	Closed	Lev Evstratov	Automatically add assay instance records to Incidents	code_reviewer: null (status=Closed)

LOPS Sprint 14 (13 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2128	Defect	Verified	—	Pipe only seq manifest is not created: No Assay Template Workitems found	code_reviewer: null (status=Verified)
LOPS-1868	Defect	Closed	Mikhail Terpugov	Net Conc shouldn't be stored on Sample at Normalization	code_reviewer: null (status=Closed)
LOPS-1845	Defect	Verified	Brad Garrett	Extraction QC Review: parent sample doesn't have a hyperlink	code_reviewer: null (status=Verified)
LOPS-1834	Defect	Closed	Mikhail Terpugov	Controls should be referred to as 'Blood Control' and 'NTC Control'	code_reviewer: null (status=Closed)
LOPS-1746	Story	Closed	Meghana Joshi	Tissue Extraction 4 - Associate Sample Group with Control to Rack	code_reviewer: null (status=Closed)
LOPS-1273	Story	Closed	Mikhail Terpugov	Library QC Review - Create Library QC Review page with Approve Action for Library Plate	code_reviewer: null (status=Closed)
LOPS-1272	Story	Closed	Klead Fusha	Library QC - Create Blood Quant Plate-Level QC Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1271	Story	Closed	Klead Fusha	Library QC - Create Blood Sample / Control-Level Specification Master Data	code_reviewer: null (status=Closed)
LOPS-1269	Story	Closed	Klead Fusha	Library Quant - Create Concentration calculation Master Data	code_reviewer: null (status=Closed)
LOPS-1268	Story	Closed	Mikhail Terpugov	Library Quant - Create Results RunData Processor and master data	code_reviewer: null (status=Closed)
LOPS-1267	Story	Closed	Mikhail Terpugov	Library Quant - Create Plating RunData Processor and master data	code_reviewer: null (status=Closed)
LOPS-1249	Story	Closed	Meghana Joshi	Tissue Extraction 4 > Tube-to-Rack - Create Tube-to-Rack Transfer Master Data	code_reviewer: null (status=Closed)
LOPS-1129	Story	Closed	Mikhail Terpugov	Normalization - Record rundata headers in SDI Group	code_reviewer: null (status=Closed)

LOPS Sprint 17 (2 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-2117	Tweak	Closed	Brandon Culver	Natera Barcodes for child samples are not being populated on the parent sample page	code_reviewer: null (status=Closed)
LOPS-1974	Story	Closed	Lev Evstratov	The system shall update the sample look up page to remove sample templates from the list of samples	code_reviewer: null (status=Closed)

LOPS Sprint 13 (15 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1925	Defect	Closed	—	Assay Templates do not have a way to indicate if an assay template is for filler samples	code_reviewer: null (status=Closed)
LOPS-1864	Story	Closed	Klead Fusha	Tissue Extraction Workflow: Task-based approach to advance Sample Groups	code_reviewer: null (status=Closed)
LOPS-1814	Tweak	Verified	Vasilii Sevriugin	Technical Update to Support Schema registration on KEH 1.51 and up	code_reviewer: null (status=Verified)
LOPS-1777	Defect	Closed	Leonid Garin	Retest from an array Manage Tests page: No rows found.	code_reviewer: null (status=Closed)
LOPS-1759	Defect	Closed	Mikhail Terpugov	After normalization rundata procesing sample data set not in Completed Status	code_reviewer: null (status=Closed)
LOPS-1717	Defect	Closed	Alex Pakhunov	Unable to process raw quant output file from M200 instrument	code_reviewer: null (status=Closed)
LOPS-1685	Story	Closed	Meghana Joshi	Tissue Extraction 7 > Tissue DNA Extraction - Create Plate	code_reviewer: null (status=Closed)
LOPS-1634	Story	Closed	Meghana Joshi	Extraction QC Review - QC Review Page for Extraction QUANT Plate	code_reviewer: null (status=Closed)
LOPS-1623	Story	Closed	—	Update Assay Code Name in Primer Design Assay Template	code_reviewer: null (status=Closed)
LOPS-1568	Story	Closed	Meghana Joshi	Test Only. Blood extraction Filter sample list page	code_reviewer: null (status=Closed)
LOPS-1567	Story	Closed	Brad Garrett	Fragmentation - Populate current date/time (Test only)	code_reviewer: null (status=Closed)
LOPS-1565	Story	Closed	Klead Fusha	Extraction quant - Expanded Calculated Concentration logic	code_reviewer: null (status=Closed)
LOPS-1266	Story	Closed	Mikhail Terpugov	Library Quant - Create Worklist	code_reviewer: null (status=Closed)
LOPS-1246	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples v2	code_reviewer: null (status=Closed)
LOPS-1111	Story	Closed	Michael Livingston	WES: Tissue Extraction - Sample Group Page Format	code_reviewer: null (status=Closed)

LOPS Sprint 12 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1861	Defect	Closed	Vasilii Sevriugin	Statuses are available for selection when no plates having such statuses are present in the system	code_reviewer: null (status=Closed)
LOPS-1614	Story	Closed	Mikhail Terpugov	Normalization - Validate Controls (Blood Plate)	code_reviewer: null (status=Closed)
LOPS-1478	Story	Closed	Michael Livingston	Create Rack List Page	code_reviewer: null (status=Closed)
LOPS-1254	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Rundata Processor	code_reviewer: null (status=Closed)
LOPS-1253	Story	Closed	Meghana Joshi	Tissue Extraction 6 > Rack-to-Plate - Create Worklist Processor, Exclude Controls	code_reviewer: null (status=Closed)
LOPS-1234	Story	Closed	Mikhail Terpugov	Normalization - Create rundata processor, plates for Blood plates	code_reviewer: null (status=Closed)

LOPS Sprint 11 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1613	Defect	Ready for SQA	—	Fix errors in test methods	code_reviewer: null (status=Ready for SQA)
LOPS-1590	Tweak	Closed	Klead Fusha	Add NAT-800316 to LOPS Repository	code_reviewer: null (status=Closed)
LOPS-1421	Story	Closed	Meghana Joshi	Blood Extraction - Create child sample via rundata processing	code_reviewer: null (status=Closed)
LOPS-1245	Story	Closed	Michael Livingston	Tissue Extraction 1 > Select Tissue Samples > Select samples	code_reviewer: null (status=Closed)
LOPS-1119	Story	Closed	Michael Livingston	Create Concentration Calculation for Extraction Quant	code_reviewer: null (status=Closed)
LOPS-1110	Story	Closed	Meghana Joshi	Blood Extraction - Build action for qc batch to store rundata headers	code_reviewer: null (status=Closed)
LOPS-760	Story	Closed	Vasiliy Kumaev	When the system parses the sample accessioning messages, the Request and samples will be created along with required dat	code_reviewer: null (status=Closed)

LOPS Sprint 15 (4 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1596	Story	Closed	Brandon Culver	The system shall display required tram lines and tram stops on the LabAdmin site map	code_reviewer: null (status=Closed)
LOPS-1027	Story	Closed	—	Build Deployment Pipeline Stuff for reagent sync deployment	code_reviewer: null (status=Closed)
LOPS-1026	Story	Closed	—	Update hardcoded stuff to use environment variables	code_reviewer: null (status=Closed)
LOPS-1025	Story	Closed	—	Gitlab Work	code_reviewer: null (status=Closed)

LOPS Sprint 09 (7 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1358	Tweak	Closed	Meghana Joshi	Update assay template ngs-wes-normal-blood-somatic-v3 to populate sample type, container type, and sample template	code_reviewer: null (status=Closed)
LOPS-1230	Story	Closed	Brad Garrett	Implement QC Batch UI and RunDetails objects	code_reviewer: null (status=Closed)
LOPS-1168	Story	Closed	Vasilii Sevriugin	Implement a byte array serializer	code_reviewer: null (status=Closed)
LOPS-1167	Story	Closed	Lev Evstratov	The system shall display required tram lines and tram stops on the LIMS site map	code_reviewer: null (status=Closed)
LOPS-1165	Tweak	Closed	Lev Evstratov	Update Germline and Somatic Sample Template Description	code_reviewer: null (status=Closed)
LOPS-861	Story	Closed	—	Set Assay Disposition to "Cancelled" and apply correct Exception Code when an assay is cancelled	code_reviewer: null (status=Closed)
LOPS-579	Story	Closed	—	The system shall have the ability to record and evaluate QC metrics for controls.	code_reviewer: null (status=Closed)

LOPS Sprint 08 (10 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1183	Story	Closed	Michael Livingston	Update array methods with new parameter - RunDataEntered	code_reviewer: null (status=Closed)
LOPS-1136	Tweak	Verified	Michael Livingston	LOPS - doesn't support measurement: "UOM-00001" and other values (events.accessioning.sample.info.v1)	code_reviewer: null (status=Verified)
LOPS-1084	Story	Closed	Lev Evstratov	Add way to configure "Point of No Return" on the assay template	code_reviewer: null (status=Closed)
LOPS-1067	Tweak	Closed	Michael Livingston	The system shall have testing for Histology Microtomy for Austin	code_reviewer: null (status=Closed)
LOPS-1058	Story	Closed	Brandon Culver	Support QC Metrics where the metric name has >40 characters	code_reviewer: null (status=Closed)
LOPS-962	Story	Closed	—	Capture patient sample expiration dates from ARM message	code_reviewer: null (status=Closed)
LOPS-883	Tweak	Closed	Michael Livingston	Create a query for the array page "By array method"	code_reviewer: null (status=Closed)
LOPS-816	Story	Closed	Vasilii Sevriugin	When the sample is created as a child sample, the system shall define the testing lab and site from the parent sample	code_reviewer: null (status=Closed)
LOPS-809	Story	Closed	Brandon Culver	When a user receives the sample, the system shall define the testing lab and site from the user	code_reviewer: null (status=Closed)
LOPS-602	Story	Closed	Chris Lott	Update Event Plan to Use Correct Child Sample Plan Code	code_reviewer: null (status=Closed)

LOPS Sprint 07 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1081	Tweak	Closed	Michael Livingston	Update Array Method WESTissueExtraction	code_reviewer: null (status=Closed)
LOPS-1079	Tweak	Closed	Michael Livingston	Update Test Methods for Software E2E	code_reviewer: null (status=Closed)
LOPS-1078	Tweak	Closed	Michael Livingston	Update Transaction Type for Software E2E	code_reviewer: null (status=Closed)
LOPS-913	Tweak	Closed	Michael Livingston	Create array methods and child sample plan for WES Tissue DNA Extraction	code_reviewer: null (status=Closed)
LOPS-903	Story	Closed	Meghana Joshi	Create workflow task for download of samples eligible for extraction to a file	code_reviewer: null (status=Closed)
LOPS-886	Story	Closed	Michael Livingston	Create array method and transfer method for WES Library Amplification plate	code_reviewer: null (status=Closed)
LOPS-832	Tweak	Closed	Michael Livingston	Sample type, arraymethod updates for Software E2E	code_reviewer: null (status=Closed)
LOPS-633	Story	Verified	Vasilii Sevriugin	Update ARM Message Processing to support v1.16 of the schema	code_reviewer: null (status=Verified)

LOPS Sprint 06 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-1014	Story	Verified	Vasiliy Kumaev	Implement changes required to ensure the Pipe Launch Request uses the correct Flow Cell ID	code_reviewer: null (status=Verified)
LOPS-963	Story	Closed	Vasiliy Kumaev	The system shall display associated assay instance records on the sample maint and view pages.	code_reviewer: null (status=Closed)
LOPS-951	Story	Verified	Vasiliy Kumaev	Implement changes to support manual data entry for the flow cell ID when setting up the sequencing run	code_reviewer: null (status=Verified)
LOPS-915	Story	Closed	Brandon Culver	Update the trackitem DB Trigger for UUID	code_reviewer: null (status=Closed)
LOPS-914	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	code_reviewer: null (status=Closed)
LOPS-900	Story	Closed	Brandon Culver	The system shall have the ability to define an Assay	code_reviewer: null (status=Closed)
LOPS-899	Tweak	Closed	Brandon Culver	Spike - Create Design plan for refactoring sequencing run flow cell setup	code_reviewer: null (status=Closed)
LOPS-888	Story	Closed	Meghana Joshi	Create Test Method "WES Capture PCR Cleanup"	code_reviewer: null (status=Closed)

LOPS Sprint 05 (23 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-912	Tweak	Verified	Michael Livingston	Create Test method and parameter list for "WES Tissue DNA Extraction:	code_reviewer: null (status=Verified)
LOPS-895	Tweak	Verified	Michael Livingston	Create Assay Request and pipeline code information for WES on X	code_reviewer: null (status=Verified)
LOPS-891	Story	Closed	Michael Livingston	Update array method "WES Sequencing" to include flow cell id and instrument id	code_reviewer: null (status=Closed)
LOPS-890	Story	Closed	Michael Livingston	Create transfer method "WES Sequencing Prep Transfer"	code_reviewer: null (status=Closed)
LOPS-889	Story	Closed	Michael Livingston	Create transfer method and array method for WES Capture PCR Cleanup plate	code_reviewer: null (status=Closed)
LOPS-887	Story	Closed	Michael Livingston	Create array method and transfer method for WES Pre-Capture Pooling Plate	code_reviewer: null (status=Closed)
LOPS-885	Story	Verified	Michael Livingston	Create Test Methods for WES PreCapture Pooling	code_reviewer: null (status=Verified)
LOPS-884	Story	Verified	Michael Livingston	Create Test Methods for WES Library Amplification	code_reviewer: null (status=Verified)
LOPS-882	Story	Verified	Michael Livingston	Create Array method and array layout for Blood extraction plate	code_reviewer: null (status=Verified)
LOPS-881	Tweak	Verified	Michael Livingston	Create a query for the sample page "by test method"	code_reviewer: null (status=Verified)
LOPS-878	Story	Closed	Michael Livingston	Create Test Methods for Sig WES Downstream	code_reviewer: null (status=Closed)
LOPS-872	Story	Closed	Brad Garrett	Update Pipeline Results Message processing to support Pipeline Analysis Only assays and upversion to v0.6	code_reviewer: null (status=Closed)
LOPS-867	Story	Closed	Vasiliy Kumaev	When the child sample is created and a sample template is chosen, specific data shall be copied to the sample from the s	code_reviewer: null (status=Closed)
LOPS-865	Story	Closed	Vasiliy Kumaev	Update Assay Request Message Processing	code_reviewer: null (status=Closed)
LOPS-857	Story	Verified	Michael Livingston	Create Array Templates and Test Methods for Sig WES Blood Extraction	code_reviewer: null (status=Verified)
LOPS-831	Story	Closed	Brandon Culver	Controls in the pipe launch request	code_reviewer: null (status=Closed)
LOPS-826	Story	Closed	Meghana Joshi	The system shall produce a Sample Event Kafka Message in JSON format that contains the required information for the samp	code_reviewer: null (status=Closed)
LOPS-811	Tweak	Closed	Brandon Culver	The system shall have the ability to display the associated trackitem information on the sample	code_reviewer: null (status=Closed)
LOPS-810	Tweak	Closed	Chris Lott	The sample notes shall always display on sample maintenance pages	code_reviewer: null (status=Closed)
LOPS-802	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	code_reviewer: null (status=Closed)
LOPS-801	Story	Closed	Brad Garrett	The system shall provide a way for users to view and approve/reject run, batch, and sample level results that are recor	code_reviewer: null (status=Closed)
LOPS-790	Story	Closed	Chris Lott	The system shall have the departmental security defined on the required SDCs.	code_reviewer: null (status=Closed)
LOPS-733	Story	Closed	Vasiliy Kumaev	When an assay disposition is updated to "Passed", "Failed", or "Cancelled", the system shall produce a message in JSON	code_reviewer: null (status=Closed)

LOPS Sprint 04 (8 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-859	Story	Closed	Brandon Culver	The system shall generate unique IDs in UUID format on trackitems for reagents.	code_reviewer: null (status=Closed)
LOPS-855	Story	Closed	Vasiliy Kumaev	When a test method status changes, the system shall have the ability to generate an outbound status message to kafka.	code_reviewer: null (status=Closed)
LOPS-838	Story	Verified	Vasiliy Kumaev	The system shall have the ability to generate Exceptions.	code_reviewer: null (status=Verified)
LOPS-828	Story	Closed	Michael Livingston	The system shall provide a way to define the control sample type for controls reported in the Pipeline Launch Request.	code_reviewer: null (status=Closed)
LOPS-821	Story	Verified	Vasiliy Kumaev	The system shall allow users to associate an Exception with an assay instance.	code_reviewer: null (status=Verified)
LOPS-820	Story	Verified	Vasiliy Kumaev	The system shall provide users with the ability to configure Exception Codes.	code_reviewer: null (status=Verified)
LOPS-819	Story	Closed	Brandon Culver	The system shall have the ability to record the Disposition of an assay.	code_reviewer: null (status=Closed)
LOPS-780	Story	Verified	Vasiliy Kumaev	The system shall have the ability to record the Sample Expiration Date	code_reviewer: null (status=Verified)

LOPS Sprint 02 (12 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-792	Tweak	Closed	Michael Livingston	Update Sequencing Run Complete Message Processing to check the Instrument Serial Number	code_reviewer: null (status=Closed)
LOPS-761	Story	Closed	Vasiliy Kumaev	When the Accessioning Kafka message is processed, the system shall produce a Sample Event Kafka Message in JSON format	code_reviewer: null (status=Closed)
LOPS-755	Story	Closed	Michael Livingston	Update: The Pipeline Launch Request shall be in JSON format and contain information required by Pipeline.	code_reviewer: null (status=Closed)
LOPS-752	Tweak	Closed	Brandon Culver	The system shall provide users with the ability to search the array list page by barcode.	code_reviewer: null (status=Closed)
LOPS-751	Tweak	Closed	Brandon Culver	The system shall have the ability to record a plate barcode on an array.	code_reviewer: null (status=Closed)
LOPS-743	Story	Closed	Brad Garrett	The system shall have the ability to define the Sample as Archive	code_reviewer: null (status=Closed)
LOPS-723	Story	Closed	Vasiliy Kumaev	Update: When the system parses the Assay Request Management messages, the required data will be captured in the appropr	code_reviewer: null (status=Closed)
LOPS-695	Tweak	Closed	Brad Garrett	The system shall allow the addition of samples to a Released Request	code_reviewer: null (status=Closed)
LOPS-687	Story	Verified	Brandon Culver	Implement the ability to ship some portion of a reagent lot and requalify that group of containers	code_reviewer: null (status=Verified)
LOPS-686	Story	Verified	Brandon Culver	Record manufacture date on reagent lot	code_reviewer: null (status=Verified)
LOPS-677	Story	Verified	Michael Livingston	Provide the ability to track plate usage at the well level	code_reviewer: null (status=Verified)
LOPS-366	Tweak	Closed	Matt Smith	Fix hardcoded bootstrap.servers url to be based on env deployed	code_reviewer: null (status=Closed)

LOPS Sprint 03 (5 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-791	Story	Closed	Chris Lott	The system shall have the ability to display the testing lab on the sample	code_reviewer: null (status=Closed)
LOPS-789	Tweak	Verified	Vasiliy Kumaev	Automatically set bootstrap.servers url for producers to be based on env deployed	code_reviewer: null (status=Verified)
LOPS-782	Tweak	Closed	Chris Lott	The system shall have the ability to scan one or more sample barcodes	code_reviewer: null (status=Closed)
LOPS-739	Tweak	Verified	Vasiliy Kumaev	Failed to process action 'LoadArray'. Reason: Failed to process action 'AdjustTrackItemInv'. Reason: Failed to convert u	code_reviewer: null (status=Verified)
LOPS-736	Tweak	Verified	Michael Livingston	Update the Germline and Somatic Sample Template to received required and no auto reciept.	code_reviewer: null (status=Verified)

LOPS Sprint 01 (6 tickets)

Key	Type	Status	Developer	Summary	Details
LOPS-718	Tweak	Closed	Vasiliy Kumaev	The system shall have the ability to record the Line Item IDs, External References, and Assay Params associated with an	code_reviewer: null (status=Closed)
LOPS-645	Story	Closed	Brad Garrett	When the system parses a PipelineInfo message, the system shall record required data for the correct run, batches, and s	code_reviewer: null (status=Closed)
LOPS-576	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate run level QC metrics.	code_reviewer: null (status=Closed)
LOPS-575	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate batch level QC metrics.	code_reviewer: null (status=Closed)
LOPS-574	Tweak	Closed	Brad Garrett	The system shall have the ability to record and evaluate sample level QC metrics.	code_reviewer: null (status=Closed)
LOPS-452	Tweak	Verified	Vasilii Sevriugin	Switch Kafka consumers to use Kafka event hub	code_reviewer: null (status=Verified)

No Sprint Assigned (101 tickets)

Only tickets with status “Ready For Development” or later are shown here. Earlier-status tickets without a sprint are excluded.

Key	Type	Status	Developer	Summary	Details
LOPS-9788	Defect	Verified	Michael Livingston	After Test Method is Canceled for the Sample the next Test Process is added automatically.	code_reviewer: null (status=Verified)
LOPS-9782	Defect	Closed	Michael Livingston	Sequencing Run is not completed for Assay43 and Assay44	code_reviewer: null (status=Closed)
LOPS-9768	Defect	Verified	Michael Livingston	Bug in Rerun Query for Verso Worklist generation.	code_reviewer: null (status=Verified)
LOPS-9550	Defect	Verified	Michael Livingston	Parameter List sgNIPT cfDNA Normalization for Manual Recovery 1 var.Evaluation has flipped datatypes for param Matrix/Mi	code_reviewer: null (status=Verified)
LOPS-9522	Story	Verified	Michael Livingston	Update Post Lib Quant 'Accept Partial' Logic	code_reviewer: null (status=Verified)
LOPS-9481	Story	Verified	Brandon Culver	Cherrypick tfMRD Updates to Plasma Isolation Runlog Processing - Mislabeled Streck Barcode	code_reviewer: null (status=Verified)
LOPS-9383	Story	Verified	Brandon Culver	Update Assay QC Control Report Results query to filter results by input barcode plate	code_reviewer: null (status=Verified)
LOPS-9121	Defect	Verified	Brandon Culver	Fix available rework count logic in Hybrid Day 1 worklist cherry pick task	code_reviewer: null (status=Verified)
LOPS-9110	Defect	Verified	Michael Livingston	Standard Test Methods added automatically during Manual Steps (gDNA	code_reviewer: null (status=Verified)
LOPS-9107	Story	Closed	—	Allow PacBio Seq Plate to be used up to 4 total times	code_reviewer: null (status=Closed)
LOPS-9001	Story	Verified	Mehmet Ali Eken	Entry point for QIP	code_reviewer: null (status=Verified)
LOPS-9000	Story	Verified	Mehmet Ali Eken	Entry point for Proficiency samples	code_reviewer: null (status=Verified)
LOPS-8929	Defect	Closed	—	cfDNA Pool Quant QC Review is not Releasing Pool Quant Results	code_reviewer: null (status=Closed)
LOPS-8906	Story	Verified	Mearat Hou	Implement Reagent Container Usage Endpoint	code_reviewer: null (status=Verified)
LOPS-8905	Story	Verified	Mearat Hou	Implement Reagent Containers API Endpoints	code_reviewer: null (status=Verified)
LOPS-8904	Story	Verified	Mearat Hou	Implement Reagent Types API Endpoints	code_reviewer: null (status=Verified)
LOPS-8903	Story	Verified	Mearat Hou	Implement Reagent Lots API Endpoints	code_reviewer: null (status=Verified)
LOPS-8901	Story	Verified	Mearat Hou	Add additional fields to LV1.0 datasource connector column.include.list	code_reviewer: null (status=Verified)
LOPS-8890	Story	Verified	Michael Livingston	Verso runlog auto-uploading	code_reviewer: null (status=Verified)
LOPS-8877	Defect	Verified	Michael Livingston	Normalization run data file fails in processing because contains failed samples	code_reviewer: null (status=Verified)
LOPS-8844	Story	Verified	Lev Evstratov	Instrument Integration Runlog processing	code_reviewer: null (status=Verified)
LOPS-8552	Story	Closed	Kathy Dao	User prep for e2e	code_reviewer: null (status=Closed)
LOPS-8534	Story	Closed	Gianna Bell-Eunice	Reagent prep for e2e	code_reviewer: null (status=Closed)
LOPS-8480	Defect	Closed	Mehmet Ali Eken	Half Plate – Level Sample QC Evaluation calculates all wells, regardless of whether they are occupied or not.	code_reviewer: null (status=Closed)
LOPS-8433	Defect	Verified	Michael Livingston	Algs pipe trigger failed due to multiple PipeJobIds on Algs Assay(Assay45))	code_reviewer: null (status=Verified)
LOPS-8418	Story	Closed	Brandon Culver	Update Runlog Processing for cfDNA Hybridization	code_reviewer: null (status=Closed)
LOPS-8292	Story	Closed	—	ability to release NOREAD on QC batch test approval page	code_reviewer: null (status=Closed)
LOPS-8225	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on trackitem transformer	code_reviewer: null (status=Closed)
LOPS-8224	Story	Closed	Mearat Hou	Use default value for some foreign key constraints field on reagentlot transformer	code_reviewer: null (status=Closed)
LOPS-8223	Story	Closed	Mearat Hou	Stop instrument record sync and remove associated transformer from reagent-sync-service	code_reviewer: null (status=Closed)
LOPS-8222	Story	Closed	Mearat Hou	Stop incident record sync and remove associated filter and transformer from reagent-sync-service	code_reviewer: null (status=Closed)
LOPS-8092	Story	Verified	Brandon Culver	Prevent users from putting incorrect gene child sample on a gene specific plate	code_reviewer: null (status=Verified)
LOPS-8062	Story	Verified	Kathy Dao	Update QC Batch list pages where Completed QC batches will populate on the QC Batch Review and there is a link to a filt	code_reviewer: null (status=Verified)
LOPS-7983	Story	Closed	Mehmet Ali Eken	Create new functionality to accept the upload start sequencing message	code_reviewer: null (status=Closed)
LOPS-7938	Defect	Closed	Bob Ruff	Unable to Promote gDNA Pool Dilution Results due to unable to Perform QC review on Tapestation Pool Quant Plate.	code_reviewer: null (status=Closed)
LOPS-7889	Story	Closed	Brandon Culver	Update sgNIPT gDNA Normalization processor & policy for v1.0 Norm runlog	code_reviewer: null (status=Closed)
LOPS-7886	Story	Closed	Michael Livingston	Update CreateChildSample action to allow pooling of multiple plasma samples in the same assay	code_reviewer: null (status=Closed)
LOPS-7823	Story	Verified	Kristina Feller	sgNIPT cfDNA Worklists Generation Updates for Increase number of plates accepted in cfDNA Pool Quantification array and	code_reviewer: null (status=Verified)
LOPS-7736	Defect	Closed	—	Creating reagents mix has error: Failed to adjust container amount. Check the use amount and units.	code_reviewer: null (status=Closed)
LOPS-7720	Story	Closed	Kathy Dao	Update reagent type in HC step	code_reviewer: null (status=Closed)
LOPS-7697	Defect	Closed	Brandon Culver	LR-PCR Quant Plating is not parsing/populating Zone Data Entry fields	code_reviewer: null (status=Closed)
LOPS-7674	Story	Verified	Michael Livingston	gDNA pre-extraction Runlog Validation for NTC Sample Presence in Available Lots	code_reviewer: null (status=Verified)
LOPS-7642	Story	Closed	Deon Hughes	Grant -a access for EPS and some LOPS members	code_reviewer: null (status=Closed)
LOPS-7575	Defect	Verified	Lev Evstratov	Failed to process action 'ProcessResultAction'. Reason: null when processing Normalization rundata	code_reviewer: null (status=Verified)
LOPS-7551	Defect	Closed	Michael Livingston	gDNA Normalization runlog is not processing.	code_reviewer: null (status=Closed)
LOPS-7535	Defect	Closed	Lev Evstratov	Samples are not available in the Sample List after received via API. Plasma Isolation Worklist cannot be generated.	code_reviewer: null (status=Closed)
LOPS-7462	Defect	Closed	Michael Livingston	Sample List is empty no samples available	code_reviewer: null (status=Closed)
LOPS-7439	Defect	Closed	—	QC Review page is not loading	code_reviewer: null (status=Closed)
LOPS-7373	Defect	Closed	Brandon Culver	Add REST role to all Actions (MD update)	code_reviewer: null (status=Closed)
LOPS-7343	Story	Closed	Gianna Bell-Eunice	Restrict "take custody" to just lab managers/supervisors	code_reviewer: null (status=Closed)
LOPS-7328	Story	Verified	Laura Dietrick	Include Search by Barcode in the Select Trackitem Page (LV_TrackItemMultiLookup) for Reagent Look up	code_reviewer: null (status=Verified)
LOPS-7206	Defect	Verified	Michael Livingston	The name of the LR-PCR Pooling Worklist is incorrect.	code_reviewer: null (status=Verified)
LOPS-7187	Story	Closed	Brandon Culver	Update Well Position Formatting (Padded Zeros) for Worklists - Iso/Ext	code_reviewer: null (status=Closed)
LOPS-7169	Story	Verified	Catalin Parvana	Test only: LOPS fails to process ARM message if Measurement is not present in SamRep	code_reviewer: null (status=Verified)
LOPS-7102	Story	Verified	Brandon Culver	Refactor PlateToRackNormalizationProcessor to not use deprecated ParamData pojo	code_reviewer: null (status=Verified)
LOPS-7092	Story	Verified	Mehmet Ali Eken	cfDNA Rework Scenario Handling (Pool Quant)	code_reviewer: null (status=Verified)
LOPS-7060	Story	Closed	Lev Evstratov	Separate LOPS Integration - SamRep	code_reviewer: null (status=Closed)
LOPS-7059	Story	Closed	—	Separate LOPS Integration - Bridge	code_reviewer: null (status=Closed)
LOPS-7053	Story	Closed	—	Separate LOPS Integration - Pipe Sequencing Manifest	code_reviewer: null (status=Closed)
LOPS-7050	Story	Closed	—	New Kafka ARM consumer group for sgNIPT Prod	code_reviewer: null (status=Closed)
LOPS-7047	Defect	Verified	Mehmet Ali Eken	sgNIPT cfDNA Hybridization worklist cannot be downloaded for cfDNA Rework Scenario.	code_reviewer: null (status=Verified)
LOPS-7004	Defect	Closed	Mehmet Ali Eken	Results from Quant Plate to Source Plate cannot be promoted	code_reviewer: null (status=Closed)
LOPS-6977	Story	Verified	Lev Evstratov	Create the pipeline for instrument integration runlogs	code_reviewer: null (status=Verified)
LOPS-6975	Story	Verified	Lev Evstratov	Update sgnipt worklist policies for folder hierarchy	code_reviewer: null (status=Verified)
LOPS-6953	Story	Closed	Michael Livingston	Remove control from failed half plate (cfDNA Postlib Quant)	code_reviewer: null (status=Closed)
LOPS-6938	Defect	Closed	Michael Livingston	Wrong number of samples and sample positions are returned in the Worklist.	code_reviewer: null (status=Closed)
LOPS-6926	Story	Closed	—	Provide LOPS Prod db Access for devs	code_reviewer: null (status=Closed)
LOPS-6885	Story	Closed	Howard LaHurreau	Spike - investigate impact to reagent validation and instrument integration with split prod instances	code_reviewer: null (status=Closed)
LOPS-6848	Tweak	Verified	Michael Livingston	gDNA LR-PCR Quant and Pooling worklist button ids are mixed up	code_reviewer: null (status=Verified)
LOPS-6777	Story	Verified	Michael Livingston	Update sgNIPT Plasma Isolation PL	code_reviewer: null (status=Verified)
LOPS-6764	Story	Verified	Lev Evstratov	Temporary override of using a cloud server for authentication credentials	code_reviewer: null (status=Verified)
LOPS-6737	Tweak	Verified	Ize Imai	Add sgNIPT gDNA LibPrep Nuclease Treatment to order.txt file	code_reviewer: null (status=Verified)
LOPS-6699	Defect	Closed	—	Gene Specific Config missing : sgNIPT AM - sgNIPT gDNA GENE LR-PCR Barcoding - 1	code_reviewer: null (status=Closed)
LOPS-6686	Defect	Verified	Michael Livingston	Rework for LRPCR: Ensure correct assays assigned	code_reviewer: null (status=Verified)
LOPS-6628	Defect	Verified	Mehmet Ali Eken	cfDNA Extraction rundata PL is truncating leading zeros from matrix barcodes	code_reviewer: null (status=Verified)
LOPS-6594	Defect	Closed	Michael Livingston	sgNIPT LRPCR (gDNA) Sequencing Run Complete message is not processed	code_reviewer: null (status=Closed)
LOPS-6588	Defect	Verified	Michael Livingston	Issue with the parent sample status not syncing from completed to inprogress.	code_reviewer: null (status=Verified)
LOPS-6579	Story	Closed	—	Test Only: Verify workaround for Plasma Isolation Override	code_reviewer: null (status=Closed)
LOPS-6563	Story	Verified	Brandon Culver	RunLogConfigPolicy node for step with expected plate suffix -LRPOOLQ	code_reviewer: null (status=Verified)
LOPS-6468	Defect	Closed	Deon Hughes	CURRENTSTORAGEUNITID is not set for child samples	code_reviewer: null (status=Closed)
LOPS-6441	Defect	Closed	Monish Grover	gDNA LR-PCR Quant Result - Sample QC(Evaluation) is not displayed on QC review after manual data entry changes	code_reviewer: null (status=Closed)
LOPS-6429	Story	Closed	—	Update cfDNA barcode primer plates sequences	code_reviewer: null (status=Closed)
LOPS-6397	Defect	Closed	Ray Ward	sgNIPT cfDNA Residual Quant - Prohibit sample approval for the sample with failed Spec condition.	code_reviewer: null (status=Closed)
LOPS-6354	Story	Closed	—	Support 'No Read'/ 'No Barcode Read' scenario for Iso/Ext	code_reviewer: null (status=Closed)
LOPS-6332	Defect	Closed	Ray Ward	Manual modification of worklist file	code_reviewer: null (status=Closed)
LOPS-6312	Defect	Verified	Lev Evstratov	sgNipt: Quant plate can't be found during quant file processing if first file processing failed	code_reviewer: null (status=Verified)
LOPS-6311	Story	Closed	Justin Jones	Ensure Extraction Managers are given Extraction Manager Job Type for Launch	code_reviewer: null (status=Closed)
LOPS-6310	Defect	Verified	Mehmet Ali Eken	sgNipt: cfDna Post Lib Prep Quant Results file processing fails for a plate with controls	code_reviewer: null (status=Verified)
LOPS-6293	Defect	Verified	Leonid Garin	Accept Partial Action at "QC Review gDNA Extraction Quantification" not updating passing samples "sgNIPT gDNA Extraction	code_reviewer: null (status=Verified)
LOPS-6000	Defect	Verified	Abdul Aziz	Extra 'Assay' option in filter menu	code_reviewer: null (status=Verified)
LOPS-5942	Story	Closed	Laura Dietrick	Test only: cfDNA Retest from Assay QC scenarios	code_reviewer: null (status=Closed)
LOPS-5941	Story	Closed	Gianna Bell-Eunice	Test only: gDNA Retest from Assay QC scenarios	code_reviewer: null (status=Closed)
LOPS-5815	Story	Verified	Michael Livingston	Samples that have not been received in LOPS should not appear in the plasma isolation worklist	code_reviewer: null (status=Verified)
LOPS-5785	Story	Verified	Lev Evstratov	Update logic for Overall Result in Assay QC Sample Analysis Review page	code_reviewer: null (status=Verified)
LOPS-5783	Story	Verified	Lev Evstratov	Update pipeline-result processor to allow PASSED_WITH_WARNINGS to auto-disposition as Passed	code_reviewer: null (status=Verified)
LOPS-5720	Story	Closed	Monish Grover	Create worklists using column format (A01, B01, C01,...) to order samples when sourcewell is present	code_reviewer: null (status=Closed)
LOPS-5509	Story	Closed	Alex Pakhunov	Trigger methylation assay pipeline via REST API - Continue (dnaInput, pano tracers)	code_reviewer: null (status=Closed)
LOPS-5321	Story	Verified	Liubomyr Skorokhod	(Test only) gDNA sequencing manifest generation	code_reviewer: null (status=Verified)
LOPS-2485	Story	Verified	Olawale Dada	Test only: gDNA downstream assay rework points	code_reviewer: null (status=Verified)
LOPS-2440	Defect	Verified	Dennis Lin	Capture Quant > Run Details - Reagents not validated as required	code_reviewer: null (status=Verified)
LOPS-1652	Story	Verified	Lev Evstratov	Notify SamRep that samples were disposed/biobanked	code_reviewer: null (status=Verified)

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